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ORCIDSWAT4LS 2015: Cambridge, UK
- James Malone, Robert Stevens, Kerstin Forsberg, Andrea Splendiani:
Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, Cambridge UK, December 7-10, 2015. CEUR Workshop Proceedings 1546, CEUR-WS.org 2016
SWAT4LS 2015 Papers
- James Malone, Robert Stevens, Kerstin Forsberg, Andrea Splendiani:
2015 SWAT4LS International Conference Editorial. 1 - Eelke van der Horst, Rajaram Kaliyaperumal, Zuotian Tatum, Mark Thompson, Erik A. Schultes, Eleni Mina, Ivo Fokkema, Johan T. den Dunnen, Marco Roos, Jeroen F. J. Laros, Barend Mons, Kristina M. Hettne, Peter A. C. 't Hoen:
Finding Novel Associations Across Domains Using Linked Data: a Case Study on Genetic Variants Disrupting Transcription Start Sites. 2-12 - Syed Ahmad Chan Bukhari, Mate Levente Nagy, Paolo Ciccarese, Michael Krauthammer, Christopher J. O. Baker:
iCyrus: A Semantic Framework for Biomedical Image Discovery. 13-22 - Alokkumar Jha, Yasar Khan, Aftab Iqbal, Achille Zappa, Muntazir Mehdi, Ratnesh Sahay, Dietrich Rebholz-Schuhmann:
Linked Functional Annotation For Differentially Expressed Gene (DEG) Demonstrated using Illumina Body Map 2.0. 23-32 - Asan Agibetov, Ernesto Jiménez-Ruiz, Alessandro Solimando, Giovanna Guerrini, Giuseppe Patanè, Michela Spagnuolo
:
Towards Shared Hypothesis Testing in the Biomedical Domain. 33-37 - Davide Alocci, Julien Mariethoz, Frédérique Lisacek:
Glycan Pattern Search. 38 - Partha Bhattacharjee, Monika Solanki, Rahul Bhattacharyya, Isaac Ehrenberg, Sanjay E. Sarma:
VacSeen: A Linked Data-Based Information Architecture to Track Vaccines Using Barcode Scan Authentication. 39-48 - Kevin Dalleau, Ndeye Coumba Ndiaye, Adrien Coulet:
Suggesting Valid Pharmacogenes by Mining Linked Data. 49-58 - Hugo Leroux, Alejandro Metke, Michael John Lawley:
ODM on FHIR: Towards Achieving Semantic Interoperability of Clinical Study Data. 59-68 - Elvira Mitraka, Andra Waagmeester, Sebastian Burgstaller-Muehlbacher, Lynn M. Schriml, Andrew I. Su, Benjamin M. Good:
Wikidata: A Platform for Data Integration and Dissemination for the Life Sciences and Beyond. 69-73 - Jesualdo Tomás Fernández-Breis, María Del Carmen Legaz-García, Hirokazu Chiba, Ikuo Uchiyama:
Towards the Semantic Standardization of Orthology Content. 74-83 - David Osumi-Sutherland, Enrico Ponta, Mélanie Courtot, Helen E. Parkinson, Laura Badi:
Cell, Chemical and Anatomical Views of the Gene Ontology: Mapping to a Roche Controlled Vocabulary. 84-93 - Phillip Lord, Jennifer D. Warrender:
A Highly Literate Approach to Ontology Building. 94-107 - Robert Stevens, Adam Nogradi:
OBOPedia: An Encyclopaedia of Biology Using OBO Ontologies. 108-117 - Simon Jupp, Tony Burdett, Catherine Leroy, Helen E. Parkinson:
A new Ontology Lookup Service at EMBL-EBI. 118-119 - Simon Jupp, Danielle Welter, Tony Burdett, Helen E. Parkinson, James Malone:
Collaborative Ontology Development Using the Webulous Architecture and Google App. 120-121 - Georgios Meditskos, Thanos G. Stavropoulos, Yiannis Kompatsiaris:
KnowSense: A Semantically-enabled Pervasive Framework to Assist Clinical Autonomy Assessment. 122-131 - Olga L. Giraldo, Alexander García Castro, Óscar Corcho, Jose Figueredo:
Using Semantics and NLP in Experimental Protocols. 132-141 - Freddy Priyatna, Raúl Alonso-Calvo, Sergio Paraiso-Medina, Gueton Padron-Sanchez, Óscar Corcho:
R2RML-based Access and Querying to Relational Clinical Data with Morph-RDB. 142-151 - Yasunori Yamamoto, Toshiaki Katayama:
D2RQ Mapper. 152-154 - Chris Mavergames, Lorne Becker, Irfan Dawood, Anthony Hughes, Julian Everett:
Cochrane PICO Annotator and PICOfinder: Using Semantically-enabled Evidence to Find What Works in Health Care. 155-156 - Jacob Baungard Hansen, Andrew Beveridge, Roisin Farmer, Leif Gehrmann, Alasdair J. G. Gray, Sunil Khutan, Tomas Robertson, Johnny Val:
Validata: An Online Tool for Testing RDF Data Conformance. 157-166 - Gang Fu, Evan Bolton, Núria Queralt-Rosinach, Laura Inés Furlong, Vinh Nguyen, Amit P. Sheth, Olivier Bodenreider, Michel Dumontier:
Exposing Provenance Metadata Using Different RDF Models. 167-176
SWAT4LS 2015 Poster Abstracts
- Shahad Kudama, Rafael Berlanga Llavori, Henry Houlden, Ernesto Jiménez-Ruiz, Hallgeir Jonvik, Adam Milward, Huw Morris, Mina Ryten, Jake Saklatvala, Michael Simpson, Nicholas W. Wood:
Towards Enabling the Semantic Access of Phenotypic Information in Clinical Letters. 177-178 - Mary E. Dolan:
OncoCL-KB, a Knowledgebase for Integration of Clinical and Molecular Cancer Data. 179-180 - Felix Shaw, Anthony Etuk, Alejandra N. González-Beltrán, Philippe Rocca-Serra, Paul J. Kersey, Ruth Bastow, Susanna-Assunta Sansone, Vicky Schneider, Robert P. Davey, David Johnson:
COPO - Linked Open Infrastructure for Plant Data. 181-182 - Miguel Ángel Rodríguez-García, Luke T. Slater, Keiron O'Shea, Paul N. Schofield, Georgios V. Gkoutos, Robert Hoehndorf:
Visualising Ontologies with AberOWL. 183-192 - Emna Amdouni, Yannick Morvan, Bernard Gibaud:
Towards an Imaging Biomarker Ontology Based on the Open Biological and Biomedical Ontologies Foundry. 193-194 - Atsuko Yamaguchi, Katsuhiko Okubo, Norio Kobayashi, Kouji Kozaki, Sadahiro Kumagai, Kai Lenz, Tomoe Nobusada, Hongyan Wu, Yasunori Yamamoto, Hideki Hatanaka:
RDF-Based Integration with SPARQL Building System for Life Science Database Archive. 195-196 - Kenneth McLeod, Albert Burger, Christopher Armit, Bill Hill, Richard A. Baldock:
From Letters to Pixels. 197-198 - Angel Esteban-Gil, Jesualdo Tomás Fernández-Breis, Clara Miranda-Lopez:
Performance Evaluation of Human Resources in a Hospital. 199-200 - Femke Ongenae, Bram Gadeyne, Femke De Backere, Liesbet De Bus, Pieter Depuydt, Johan Decruyenaere, Filip De Turck:
Digital Dr. House: A Semantic Alerting Platform for the ICU. 201-202 - Mohammad Sadnan Al Manir, Alexandre Riazanov, Harold Boley, Artjom Klein, Christopher J. O. Baker:
Automated Generation of SADI Web Services for Clinical Intelligence using Ruled-Based Semantic Mappings. 203-204 - Aravind Venkatesan, Nordine El Hassouni, Florian Philippe, Cyril Pommier, Hadi Quesneville, Manuel Ruiz, Pierre Larmande:
Exposing French Agronomic Resources as Linked Open Data. 205-207 - Harold R. Solbrig, Eric Prud'hommeaux, Deepak K. Sharma, Christopher G. Chute, Guoqian Jiang:
Feasibility of Modeling HL7 FHIR Profiles Using RDF Shape Expressions Language. 208-209 - Hiroshi Masuya, Terue Takatsuki, Mikako Saito, Eiki Takayama, Kazuya Ohshima, Nozomu Ohshiro, Kai Lenz, Nobuhiko Tanaka, Hiroshi Mori, Shuichi Kawashima, Norio Kobayashi:
RDF-based Data Sharing of Bio-resource Related Information. 210-211 - Anna Gaulton, Lee Harland, Mark Davies, George Papadatos, Antonis Loizou, Nathan Dedman, Daniela Digles, Stian Soiland-Reyes, Valery Tkachenko, Stefan Senger, John P. Overington, Nick Lynch:
Semantic-Web Access to Patent Annotations. 212-213 - Bas Stringer, Albert Meroño-Peñuela, Antonis Loizou, Sanne Abeln, Jaap Heringa:
SCRY: Enabling Quantitative Reasoning in SPARQL Queries. 214-215 - Anna-Lena Lamprecht, Tiziana Margaria:
Automatic Synthesis of Bioconductor Pipelines: A Domain Modeling Challenge. 216-217 - Hirokazu Chiba, Ikuo Uchiyama:
SPANG: A Command-line Client Supporting Query Generation for Distributed SPARQL Endpoints. 218-219 - Weiguo Xia, Ernesto Jiménez-Ruiz, Valerie V. Cross:
Using BioPortal as a Repository for Mediating Ontologies in Ontology Alignment. 220-221 - Norio Kobayashi, Kai Lenz, Hiroshi Masuya:
RIKEN Meta Database: A Life-science Metadata Database Based on the Semantic Web. 222-223 - Pantelis Natsiavas, Vassilis Koutkias, Nicos Maglaveras:
Exploring the Capacity of Open, Linked Data Sources to Assess Adverse Drug Reaction Signals. 224-226 - Mélanie Courtot, Aleksandra Shypitsyna, Elena Speretta, Alexander Holmes, Tony Sawford, Tony Wardell, Maria Jesus Martin, Claire O'Donovan:
UniProt-GOA: A Central Resource for Data Integration and GO Annotation. 227-228 - Thanos G. Stavropoulos, Georgios Meditskos, Ioannis Kompatsiaris, Stelios Andreadis:
Dem@Care: Ambient Sensing and Intelligent Decision Support for the Care of Dementia. 229-230 - Erik M. van Mulligen, Wytze Vlietstra, Rein Vos, Jan A. Kors:
Information from Semantic Integration of Texts and Databases. 231-240 - Joseph Utecht, Mathias Brochhausen:
Measuring the Usability of Triple Stores for Knowledge Management on Trauma Care Organizations. 241-242
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