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ORCIDJournal of Integrative Bioinformatics, Volume 10
Volume 10, Number 1, 2013
- Hee Shin Kim, Jay E. Mittenthal, Gustavo Caetano-Anollés:
Widespread Recruitment of Ancient Domain Structures in Modern Enzymes during Metabolic Evolution. - Maura Cárdenas-García, Pedro Pablo González Pérez:
Applying the Tuple Space-Based Approach to the Simulation of the Caspases, an Essential Signalling Pathway. - Ralf Hofestädt, Benjamin Kormeier, Matthias Lange
, Falk Schreiber, Björn Sommer, Stephan Weise:
Editorial. - Brian Godsey:
Discovery of miR-mRNA interactions via simultaneous Bayesian inference of gene networks and clusters using sequence-based predictions and expression data. - Mingming Liu, Vanessa King, Wei Keat Lim:
Assembling cell context-specific gene sets: a case in cardiomyopathy.
Volume 10, Number 2, 2013
- Muserref Duygu Saçar, Hamid Hamzeiy, Jens Allmer:
Can MiRBase Provide Positive Data for Machine Learning for the Detection of MiRNA Hairpins? - Sohei Ito, Takuma Ichinose, Masaya Shimakawa, Naoko Izumi, Shigeki Hagihara, Naoki Yonezaki:
Modular analysis of gene networks by linear temporal logic. - Jose C. Nacher:
Community structure of non-coding RNA interaction network. - Till Schneider, Anne-Christin Hauschild, Jörg Ingo Baumbach, Jan Baumbach:
An Integrative Clinical Database and Diagnostics Platform for Biomarker Identification and Analysis in Ion Mobility Spectra of Human Exhaled Air. - María del Carmen Pérez, Alejandro López, Pablo Padilla:
Space-time dynamics of Stem Cell Niches: a unified approach for Plants. - Lei Shi, Lenneke Jong, Ulrike Wittig, Philippe Lucarelli, Markus Stepath, Stephanie Müller, Lorenza Alice D'Alessandro, Ursula Klingmüller, Wolfgang Müller:
Excemplify: A Flexible Template Based Solution, Parsing and Managing Data in Spreadsheets for Experimentalists. - Peter Petrov, Milko Krachunov, Dimitar Vassilev:
A Semi-Automated Approach for Anatomical Ontology Mapping. - Cassidy Kelly, Hui Yang:
A System for Extracting Study Design Parameters from Nutritional Genomics Abstracts. - Lili Liu, Qian Mei, Zhenning Yu, Tianhao Sun, Zijun Zhang, Ming Chen:
An Integrative Bioinformatics Framework for Genome-scale Multiple Level Network Reconstruction of Rice. - Goksel Misirli, Anil Wipat, Joseph Mullen, Katherine James, Matthew R. Pocock, Wendy Smith, Nick Allenby, Jennifer Hallinan:
BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology.
Volume 10, Number 3, 2013
- Jirí Novák, Timo Sachsenberg, David Hoksza, Tomás Skopal, Oliver Kohlbacher:
On Comparison of SimTandem with State-of-the-Art Peptide Identification Tools, Efficiency of Precursor Mass Filter and Dealing with Variable Modifications. - José Ignacio Requeno, José Manuel Colom:
Model checking software for phylogenetic trees using distribution and database methods. - Carlos A. C. Bastos, Vera Afreixo, Sara P. Garcia, Armando J. Pinho:
Inter-STOP symbol distances for the identification of coding regions. - Tiago Loureiro, Rui Camacho, Jorge Vieira, Nuno A. Fonseca:
Improving the performance of Transposable Elements detection tools. - José A. Castellanos-Garzón, Fernando Díaz:
An Evolutionary and Visual Framework for Clustering of DNA Microarray Data. - Tiago Resende, Daniela M. Correia, Miguel Rocha, Isabel Rocha:
Re-annotation of the genome sequence of Helicobacter pylori 26695.
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