Stop the war!Остановите войну!
for scientists:
default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDBibTeX records: David Fernández-Baca
@article{DBLP:journals/tcbb/RanjanFFTD23,
author = {Ashish Ranjan and
Md. S. Fahad and
David Fern{\'{a}}ndez{-}Baca and
Sudhakar Tripathi and
Akshay Deepak},
title = {MCWS-Transformers: Towards an Efficient Modeling of Protein Sequences
via Multi Context-Window Based Scaled Self-Attention},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {20},
number = {2},
pages = {1188--1199},
year = {2023},
url = {https://doi.org/10.1109/TCBB.2022.3173789},
doi = {10.1109/TCBB.2022.3173789},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/RanjanFFTD23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RanjanFTD22,
author = {Ashish Ranjan and
David Fern{\'{a}}ndez{-}Baca and
Sudhakar Tripathi and
Akshay Deepak},
title = {An Ensemble Tf-Idf Based Approach to Protein Function Prediction via
Sequence Segmentation},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {5},
pages = {2685--2696},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3093060},
doi = {10.1109/TCBB.2021.3093060},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/RanjanFTD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ParviniBF22,
author = {Ghazaleh Parvini and
Katherine Braught and
David Fern{\'{a}}ndez{-}Baca},
title = {Checking Phylogenetics Decisiveness in Theory and in Practice},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {6},
pages = {3307--3316},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3128381},
doi = {10.1109/TCBB.2021.3128381},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ParviniBF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/Fernandez-BacaL21,
author = {David Fern{\'{a}}ndez{-}Baca and
Lei Liu},
title = {Testing the agreement of trees with internal labels},
journal = {Algorithms Mol. Biol.},
volume = {16},
number = {1},
pages = {22},
year = {2021},
url = {https://doi.org/10.1186/s13015-021-00201-9},
doi = {10.1186/S13015-021-00201-9},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/almob/Fernandez-BacaL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-02103,
author = {Ghazaleh Parvini and
David Fern{\'{a}}ndez{-}Baca},
title = {Exact Algorithms for No-Rainbow Coloring and Phylogenetic Decisiveness},
journal = {CoRR},
volume = {abs/2104.02103},
year = {2021},
url = {https://arxiv.org/abs/2104.02103},
eprinttype = {arXiv},
eprint = {2104.02103},
timestamp = {Mon, 12 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2104-02103.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RanjanFFDT20,
author = {Ashish Ranjan and
Md. Shah Fahad and
David Fern{\'{a}}ndez{-}Baca and
Akshay Deepak and
Sudhakar Tripathi},
title = {Deep Robust Framework for Protein Function Prediction Using Variable-Length
Protein Sequences},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {17},
number = {5},
pages = {1648--1659},
year = {2020},
url = {https://doi.org/10.1109/TCBB.2019.2911609},
doi = {10.1109/TCBB.2019.2911609},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/RanjanFFDT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Fernandez-BacaL20,
author = {David Fern{\'{a}}ndez{-}Baca and
Lei Liu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Testing the Agreement of Trees with Internal Labels},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {127--139},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_12},
doi = {10.1007/978-3-030-57821-3\_12},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Fernandez-BacaL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ParviniBF20,
author = {Ghazaleh Parvini and
Katherine Braught and
David Fern{\'{a}}ndez{-}Baca},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Checking Phylogenetic Decisiveness in Theory and in Practice},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {189--202},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_17},
doi = {10.1007/978-3-030-57821-3\_17},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ParviniBF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-09722,
author = {Ghazaleh Parvini and
Katherine Braught and
David Fern{\'{a}}ndez{-}Baca},
title = {Checking Phylogenetic Decisiveness in Theory and in Practice},
journal = {CoRR},
volume = {abs/2002.09722},
year = {2020},
url = {https://arxiv.org/abs/2002.09722},
eprinttype = {arXiv},
eprint = {2002.09722},
timestamp = {Tue, 03 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-09722.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-09725,
author = {David Fern{\'{a}}ndez{-}Baca and
Lei Liu},
title = {Testing the Agreement of Trees with Internal Labels},
journal = {CoRR},
volume = {abs/2002.09725},
year = {2020},
url = {https://arxiv.org/abs/2002.09725},
eprinttype = {arXiv},
eprint = {2002.09725},
timestamp = {Tue, 03 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-09725.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithms/Fernandez-BacaL19,
author = {David Fern{\'{a}}ndez{-}Baca and
Lei Liu},
title = {Tree Compatibility, Incomplete Directed Perfect Phylogeny, and Dynamic
Graph Connectivity: An Experimental Study},
journal = {Algorithms},
volume = {12},
number = {3},
pages = {53},
year = {2019},
url = {https://doi.org/10.3390/a12030053},
doi = {10.3390/A12030053},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithms/Fernandez-BacaL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1910-07819,
author = {Balanand Jha and
David Fern{\'{a}}ndez{-}Baca and
Akshay Deepak and
Kumar Abhishek},
title = {EvoZip: Efficient Compression of Large Collections of Evolutionary
Trees},
journal = {CoRR},
volume = {abs/1910.07819},
year = {2019},
url = {http://arxiv.org/abs/1910.07819},
eprinttype = {arXiv},
eprint = {1910.07819},
timestamp = {Tue, 14 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1910-07819.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/DengF18,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
title = {Fast Compatibility Testing for Rooted Phylogenetic Trees},
journal = {Algorithmica},
volume = {80},
number = {8},
pages = {2453--2477},
year = {2018},
url = {https://doi.org/10.1007/s00453-017-0330-4},
doi = {10.1007/S00453-017-0330-4},
timestamp = {Fri, 11 May 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/DengF18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Fernandez-BacaV18,
author = {David Fern{\'{a}}ndez{-}Baca and
Sudheer Vakati},
title = {On compatibility and incompatibility of collections of unrooted phylogenetic
trees},
journal = {Discret. Appl. Math.},
volume = {245},
pages = {42--58},
year = {2018},
url = {https://doi.org/10.1016/j.dam.2017.05.002},
doi = {10.1016/J.DAM.2017.05.002},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Fernandez-BacaV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/tf/18/Fernandez-BacaV18,
author = {David Fern{\'{a}}ndez{-}Baca and
Balaji Venkatachalam},
editor = {Teofilo F. Gonzalez},
title = {Sensitivity Analysis in Combinatorial Optimization},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics, Second Edition,
Volume 1: Methologies and Traditional Applications},
pages = {455--472},
publisher = {Chapman and Hall/CRC},
year = {2018},
url = {https://doi.org/10.1201/9781351236423-26},
doi = {10.1201/9781351236423-26},
timestamp = {Mon, 28 Oct 2019 16:49:19 +0100},
biburl = {https://dblp.org/rec/books/tf/18/Fernandez-BacaV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DengF17,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
title = {An efficient algorithm for testing the compatibility of phylogenies
with nested taxa},
journal = {Algorithms Mol. Biol.},
volume = {12},
number = {1},
pages = {7:1--7:12},
year = {2017},
url = {https://doi.org/10.1186/s13015-017-0099-7},
doi = {10.1186/S13015-017-0099-7},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/DengF17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/DengF16,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
editor = {Roberto Grossi and
Moshe Lewenstein},
title = {Fast Compatibility Testing for Rooted Phylogenetic Trees},
booktitle = {27th Annual Symposium on Combinatorial Pattern Matching, {CPM} 2016,
June 27-29, 2016, Tel Aviv, Israel},
series = {LIPIcs},
volume = {54},
pages = {12:1--12:12},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2016},
url = {https://doi.org/10.4230/LIPIcs.CPM.2016.12},
doi = {10.4230/LIPICS.CPM.2016.12},
timestamp = {Tue, 11 Feb 2020 15:52:14 +0100},
biburl = {https://dblp.org/rec/conf/cpm/DengF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DengF16,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
editor = {Martin C. Frith and
Christian N{\o}rgaard Storm Pedersen},
title = {Fast Compatibility Testing for Phylogenies with Nested Taxa},
booktitle = {Algorithms in Bioinformatics - 16th International Workshop, {WABI}
2016, Aarhus, Denmark, August 22-24, 2016. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9838},
pages = {90--101},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-43681-4\_8},
doi = {10.1007/978-3-319-43681-4\_8},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DengF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/DengF16,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
title = {Fast Compatibility Testing for Phylogenies with Nested Taxa},
journal = {CoRR},
volume = {abs/1605.02045},
year = {2016},
url = {http://arxiv.org/abs/1605.02045},
eprinttype = {arXiv},
eprint = {1605.02045},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/DengF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaudharyFB15,
author = {Ruchi Chaudhary and
David Fern{\'{a}}ndez{-}Baca and
John Gordon Burleigh},
title = {MulRF: a software package for phylogenetic analysis using multi-copy
gene trees},
journal = {Bioinform.},
volume = {31},
number = {3},
pages = {432--433},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btu648},
doi = {10.1093/BIOINFORMATICS/BTU648},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaudharyFB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/endm/VakatiF15,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Compatibility, Incompatibility, Tree-Width, and Forbidden Phylogenetic
Minors},
journal = {Electron. Notes Discret. Math.},
volume = {50},
pages = {337--342},
year = {2015},
url = {https://doi.org/10.1016/j.endm.2015.07.056},
doi = {10.1016/J.ENDM.2015.07.056},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/endm/VakatiF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/Fernandez-BacaG15,
author = {David Fern{\'{a}}ndez{-}Baca and
Sylvain Guillemot and
Brad Shutters and
Sudheer Vakati},
title = {Fixed-Parameter Algorithms for Finding Agreement Supertrees},
journal = {{SIAM} J. Comput.},
volume = {44},
number = {2},
pages = {384--410},
year = {2015},
url = {https://doi.org/10.1137/120897559},
doi = {10.1137/120897559},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/Fernandez-BacaG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/ChaudharyFB15,
author = {Ruchi Chaudhary and
David Fern{\'{a}}ndez{-}Baca and
J. Gordon Burleigh},
editor = {Adrian{-}Horia Dediu and
Francisco Hern{\'{a}}ndez Quiroz and
Carlos Mart{\'{\i}}n{-}Vide and
David A. Rosenblueth},
title = {Constructing and Employing Tree Alignment Graphs for Phylogenetic
Synthesis},
booktitle = {Algorithms for Computational Biology - Second International Conference,
AlCoB 2015, Mexico City, Mexico, August 4-5, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9199},
pages = {97--108},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-21233-3\_8},
doi = {10.1007/978-3-319-21233-3\_8},
timestamp = {Tue, 14 May 2019 10:00:49 +0200},
biburl = {https://dblp.org/rec/conf/alcob/ChaudharyFB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ChaudharyFB15,
author = {Ruchi Chaudhary and
David Fern{\'{a}}ndez{-}Baca and
J. Gordon Burleigh},
title = {Constructing and Employing Tree Alignment Graphs for Phylogenetic
Synthesis},
journal = {CoRR},
volume = {abs/1503.03877},
year = {2015},
url = {http://arxiv.org/abs/1503.03877},
eprinttype = {arXiv},
eprint = {1503.03877},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/ChaudharyFB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/DengF15,
author = {Yun Deng and
David Fern{\'{a}}ndez{-}Baca},
title = {Fast Compatibility Testing for Rooted Phylogenetic Trees},
journal = {CoRR},
volume = {abs/1510.07758},
year = {2015},
url = {http://arxiv.org/abs/1510.07758},
eprinttype = {arXiv},
eprint = {1510.07758},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/DengF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/Fernandez-Baca14,
author = {David Fern{\'{a}}ndez{-}Baca},
title = {Editorial},
journal = {Algorithmica},
volume = {70},
number = {2},
pages = {149--151},
year = {2014},
url = {https://doi.org/10.1007/s00453-014-9900-x},
doi = {10.1007/S00453-014-9900-X},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/Fernandez-Baca14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/VakatiF14,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Characterizing compatibility and agreement of unrooted trees via cuts
in graphs},
journal = {Algorithms Mol. Biol.},
volume = {9},
pages = {13},
year = {2014},
url = {https://doi.org/10.1186/1748-7188-9-13},
doi = {10.1186/1748-7188-9-13},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/VakatiF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DeepakF14,
author = {Akshay Deepak and
David Fern{\'{a}}ndez{-}Baca},
title = {Enumerating all maximal frequent subtrees in collections of phylogenetic
trees},
journal = {Algorithms Mol. Biol.},
volume = {9},
pages = {16},
year = {2014},
url = {https://doi.org/10.1186/1748-7188-9-16},
doi = {10.1186/1748-7188-9-16},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/DeepakF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/DeepakFTSM14,
author = {Akshay Deepak and
David Fern{\'{a}}ndez{-}Baca and
Srikanta Tirthapura and
Michael J. Sanderson and
Michelle M. McMahon},
title = {EvoMiner: frequent subtree mining in phylogenetic databases},
journal = {Knowl. Inf. Syst.},
volume = {41},
number = {3},
pages = {559--590},
year = {2014},
url = {https://doi.org/10.1007/s10115-013-0676-0},
doi = {10.1007/S10115-013-0676-0},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/kais/DeepakFTSM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/ShuttersVF13,
author = {Brad Shutters and
Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Incompatible quartets, triplets, and characters},
journal = {Algorithms Mol. Biol.},
volume = {8},
pages = {11},
year = {2013},
url = {https://doi.org/10.1186/1748-7188-8-11},
doi = {10.1186/1748-7188-8-11},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/ShuttersVF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DeepakFM13,
author = {Akshay Deepak and
David Fern{\'{a}}ndez{-}Baca and
Michelle M. McMahon},
title = {Extracting conflict-free information from multi-labeled trees},
journal = {Algorithms Mol. Biol.},
volume = {8},
pages = {18},
year = {2013},
url = {https://doi.org/10.1186/1748-7188-8-18},
doi = {10.1186/1748-7188-8-18},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/DeepakFM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/ChaudharyBF13,
author = {Ruchi Chaudhary and
John Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
title = {Inferring species trees from incongruent multi-copy gene trees using
the Robinson-Foulds distance},
journal = {Algorithms Mol. Biol.},
volume = {8},
pages = {28},
year = {2013},
url = {https://doi.org/10.1186/1748-7188-8-28},
doi = {10.1186/1748-7188-8-28},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/ChaudharyBF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/VakatiF13,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
editor = {Aaron E. Darling and
Jens Stoye},
title = {Characterizing Compatibility and Agreement of Unrooted Trees via Cuts
in Graphs},
booktitle = {Algorithms in Bioinformatics - 13th International Workshop, {WABI}
2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8126},
pages = {185--199},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40453-5\_15},
doi = {10.1007/978-3-642-40453-5\_15},
timestamp = {Tue, 21 Mar 2023 21:00:29 +0100},
biburl = {https://dblp.org/rec/conf/wabi/VakatiF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/VakatiF13,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Characterizing Compatibility and Agreement of Unrooted Trees via Cuts
in Graphs},
journal = {CoRR},
volume = {abs/1307.7828},
year = {2013},
url = {http://arxiv.org/abs/1307.7828},
eprinttype = {arXiv},
eprint = {1307.7828},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/VakatiF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/appml/ShuttersF12,
author = {Brad Shutters and
David Fern{\'{a}}ndez{-}Baca},
title = {A simple characterization of the minimal obstruction sets for three-state
perfect phylogenies},
journal = {Appl. Math. Lett.},
volume = {25},
number = {9},
pages = {1226--1229},
year = {2012},
url = {https://doi.org/10.1016/j.aml.2012.02.060},
doi = {10.1016/J.AML.2012.02.060},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/appml/ShuttersF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cleiej/AguilarADFLMNP12,
author = {Jos{\'{e}} Aguilar and
John Atkinson and
Yezid Donoso and
David Fern{\'{a}}ndez{-}Baca and
Ernst L. Leiss and
Gabriela Mar{\'{\i}}n and
Luciana Porcher Nedel and
Oscar Pastor},
title = {Preface to {CLEI} 2011 Special Issue},
journal = {{CLEI} Electron. J.},
volume = {15},
number = {2},
year = {2012},
url = {https://doi.org/10.19153/cleiej.15.2.0},
doi = {10.19153/CLEIEJ.15.2.0},
timestamp = {Tue, 08 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cleiej/AguilarADFLMNP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChaudharyBF12,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
title = {Fast Local Search for Unrooted Robinson-Foulds Supertrees},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {9},
number = {4},
pages = {1004--1013},
year = {2012},
url = {https://doi.org/10.1109/TCBB.2012.47},
doi = {10.1109/TCBB.2012.47},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChaudharyBF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/Fernandez-BacaGSV12,
author = {David Fern{\'{a}}ndez{-}Baca and
Sylvain Guillemot and
Brad Shutters and
Sudheer Vakati},
editor = {Juha K{\"{a}}rkk{\"{a}}inen and
Jens Stoye},
title = {Fixed-Parameter Algorithms for Finding Agreement Supertrees},
booktitle = {Combinatorial Pattern Matching - 23rd Annual Symposium, {CPM} 2012,
Helsinki, Finland, July 3-5, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7354},
pages = {373--384},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-31265-6\_30},
doi = {10.1007/978-3-642-31265-6\_30},
timestamp = {Tue, 21 Mar 2023 21:02:12 +0100},
biburl = {https://dblp.org/rec/conf/cpm/Fernandez-BacaGSV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DeepakDF12,
author = {Akshay Deepak and
Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and
Exact Algorithms},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {87--98},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_9},
doi = {10.1007/978-3-642-30191-9\_9},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DeepakDF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DeepakFM12,
author = {Akshay Deepak and
David Fern{\'{a}}ndez{-}Baca and
Michelle M. McMahon},
editor = {Benjamin J. Raphael and
Jijun Tang},
title = {Extracting Conflict-Free Information from Multi-labeled Trees},
booktitle = {Algorithms in Bioinformatics - 12th International Workshop, {WABI}
2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7534},
pages = {81--92},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-33122-0\_7},
doi = {10.1007/978-3-642-33122-0\_7},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DeepakFM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/ShuttersVF12,
author = {Brad Shutters and
Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
editor = {Benjamin J. Raphael and
Jijun Tang},
title = {Improved Lower Bounds on the Compatibility of Quartets, Triplets,
and Multi-state Characters},
booktitle = {Algorithms in Bioinformatics - 12th International Workshop, {WABI}
2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7534},
pages = {190--200},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-33122-0\_15},
doi = {10.1007/978-3-642-33122-0\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/ShuttersVF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/latin/2012,
editor = {David Fern{\'{a}}ndez{-}Baca},
title = {{LATIN} 2012: Theoretical Informatics - 10th Latin American Symposium,
Arequipa, Peru, April 16-20, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7256},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-29344-3},
doi = {10.1007/978-3-642-29344-3},
isbn = {978-3-642-29343-6},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/latin/2012.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1205-5779,
author = {Brad Shutters and
Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Improved Lower Bounds on the Compatibility of Multi-State Characters},
journal = {CoRR},
volume = {abs/1205.5779},
year = {2012},
url = {http://arxiv.org/abs/1205.5779},
eprinttype = {arXiv},
eprint = {1205.5779},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1205-5779.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1205-6359,
author = {Akshay Deepak and
David Fern{\'{a}}ndez{-}Baca and
Michelle M. McMahon},
title = {Extracting Conflict-free Information from Multi-labeled Trees},
journal = {CoRR},
volume = {abs/1205.6359},
year = {2012},
url = {http://arxiv.org/abs/1205.6359},
eprinttype = {arXiv},
eprint = {1205.6359},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1205-6359.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1210-2665,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
title = {Inferring Species Trees from Incongruent Multi-Copy Gene Trees Using
the Robinson-Foulds Distance},
journal = {CoRR},
volume = {abs/1210.2665},
year = {2012},
url = {http://arxiv.org/abs/1210.2665},
eprinttype = {arXiv},
eprint = {1210.2665},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1210-2665.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1210-3762,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {On Two Graph-Theoretic Characterizations of Tree Compatibility},
journal = {CoRR},
volume = {abs/1210.3762},
year = {2012},
url = {http://arxiv.org/abs/1210.3762},
eprinttype = {arXiv},
eprint = {1210.3762},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1210-3762.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/appml/VakatiF11,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Graph triangulations and the compatibility of unrooted phylogenetic
trees},
journal = {Appl. Math. Lett.},
volume = {24},
number = {5},
pages = {719--723},
year = {2011},
url = {https://doi.org/10.1016/j.aml.2010.12.015},
doi = {10.1016/J.AML.2010.12.015},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/appml/VakatiF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/0002BFE11,
author = {Wen{-}Chieh Chang and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca and
Oliver Eulenstein},
title = {An {ILP} solution for the gene duplication problem},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S14},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S14},
doi = {10.1186/1471-2105-12-S1-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/0002BFE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/DongFMP11,
author = {Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca and
Fred R. McMorris and
Robert C. Powers},
title = {An axiomatic study of Majority-rule {(+} {)} and associated consensus
functions on hierarchies},
journal = {Discret. Appl. Math.},
volume = {159},
number = {17},
pages = {2038--2044},
year = {2011},
url = {https://doi.org/10.1016/j.dam.2011.07.002},
doi = {10.1016/J.DAM.2011.07.002},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/DongFMP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BansalDF11,
author = {Mukul S. Bansal and
Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
title = {Comparing and aggregating partially resolved trees},
journal = {Theor. Comput. Sci.},
volume = {412},
number = {48},
pages = {6634--6652},
year = {2011},
url = {https://doi.org/10.1016/j.tcs.2011.08.027},
doi = {10.1016/J.TCS.2011.08.027},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/BansalDF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChaudharyBF11,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Fast Local Search for Unrooted Robinson-Foulds Supertrees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {184--196},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_20},
doi = {10.1007/978-3-642-21260-4\_20},
timestamp = {Fri, 21 Aug 2020 17:12:20 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DongF11,
author = {Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
editor = {Teresa M. Przytycka and
Marie{-}France Sagot},
title = {Constructing Large Conservative Supertrees},
booktitle = {Algorithms in Bioinformatics - 11th International Workshop, {WABI}
2011, Saarbr{\"{u}}cken, Germany, September 5-7, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6833},
pages = {61--72},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-23038-7\_6},
doi = {10.1007/978-3-642-23038-7\_6},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DongF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1106-0874,
author = {Brad Shutters and
David Fern{\'{a}}ndez{-}Baca},
title = {A Simple Characterization of the Minimal Obstruction Sets for Three-State
Perfect Phylogenies},
journal = {CoRR},
volume = {abs/1106.0874},
year = {2011},
url = {http://arxiv.org/abs/1106.0874},
eprinttype = {arXiv},
eprint = {1106.0874},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1106-0874.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DongFM10,
author = {Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca and
Fred R. McMorris},
title = {Constructing majority-rule supertrees},
journal = {Algorithms Mol. Biol.},
volume = {5},
pages = {2},
year = {2010},
url = {https://doi.org/10.1186/1748-7188-5-2},
doi = {10.1186/1748-7188-5-2},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/DongFM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/BansalBEF10,
author = {Mukul S. Bansal and
J. Gordon Burleigh and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca},
title = {Robinson-Foulds Supertrees},
journal = {Algorithms Mol. Biol.},
volume = {5},
pages = {18},
year = {2010},
url = {https://doi.org/10.1186/1748-7188-5-18},
doi = {10.1186/1748-7188-5-18},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/BansalBEF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChaudharyBWFE10,
author = {Ruchi Chaudhary and
Mukul S. Bansal and
Andr{\'{e}} Wehe and
David Fern{\'{a}}ndez{-}Baca and
Oliver Eulenstein},
title = {iGTP: {A} software package for large-scale gene tree parsimony analysis},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {574},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-574},
doi = {10.1186/1471-2105-11-574},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChaudharyBWFE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1004-4196,
author = {Sudheer Vakati and
David Fern{\'{a}}ndez{-}Baca},
title = {Graph Triangulations and the Compatibility of Unrooted Phylogenetic
Trees},
journal = {CoRR},
volume = {abs/1004.4196},
year = {2010},
url = {http://arxiv.org/abs/1004.4196},
eprinttype = {arXiv},
eprint = {1004.4196},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1004-4196.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/BansalF09,
author = {Mukul S. Bansal and
David Fern{\'{a}}ndez{-}Baca},
title = {Computing distances between partial rankings},
journal = {Inf. Process. Lett.},
volume = {109},
number = {4},
pages = {238--241},
year = {2009},
url = {https://doi.org/10.1016/j.ipl.2008.10.010},
doi = {10.1016/J.IPL.2008.10.010},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/BansalF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/talg/Fernandez-BacaV09,
author = {David Fern{\'{a}}ndez{-}Baca and
Balaji Venkatachalam},
title = {Parametric analysis for ungapped Markov models of evolution},
journal = {{ACM} Trans. Algorithms},
volume = {5},
number = {4},
pages = {44:1--44:20},
year = {2009},
url = {https://doi.org/10.1145/1597036.1597048},
doi = {10.1145/1597036.1597048},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/talg/Fernandez-BacaV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bicob/BansalCEF09,
author = {Mukul S. Bansal and
Wen{-}Chieh Chang and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca},
editor = {Sanguthevar Rajasekaran},
title = {Generalized Binary Tanglegrams: Algorithms and Applications},
booktitle = {Bioinformatics and Computational Biology, First International Conference,
BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5462},
pages = {114--125},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-00727-9\_13},
doi = {10.1007/978-3-642-00727-9\_13},
timestamp = {Tue, 14 May 2019 10:00:55 +0200},
biburl = {https://dblp.org/rec/conf/bicob/BansalCEF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DongFM09,
author = {Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca and
Fred R. McMorris},
editor = {Steven Salzberg and
Tandy J. Warnow},
title = {Constructing Majority-Rule Supertrees},
booktitle = {Algorithms in Bioinformatics, 9th International Workshop, {WABI} 2009,
Philadelphia, PA, USA, September 12-13, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5724},
pages = {73--84},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04241-6\_7},
doi = {10.1007/978-3-642-04241-6\_7},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DongFM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0906-5089,
author = {Mukul S. Bansal and
Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
title = {Comparing and Aggregating Partially Resolved Trees},
journal = {CoRR},
volume = {abs/0906.5089},
year = {2009},
url = {http://arxiv.org/abs/0906.5089},
eprinttype = {arXiv},
eprint = {0906.5089},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0906-5089.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/latin/BansalDF08,
author = {Mukul S. Bansal and
Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
editor = {Eduardo Sany Laber and
Claudson F. Bornstein and
Loana Tito Nogueira and
Lu{\'{e}}rbio Faria},
title = {Comparing and Aggregating Partially Resolved Trees},
booktitle = {{LATIN} 2008: Theoretical Informatics, 8th Latin American Symposium,
B{\'{u}}zios, Brazil, April 7-11, 2008, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4957},
pages = {72--83},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78773-0\_7},
doi = {10.1007/978-3-540-78773-0\_7},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/latin/BansalDF08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/VenkatachalamF07,
author = {Balaji Venkatachalam and
David Fern{\'{a}}ndez{-}Baca},
editor = {Teofilo F. Gonzalez},
title = {Sensitivity Analysis in Combinatorial Optimization},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics},
publisher = {Chapman and Hall/CRC},
year = {2007},
url = {https://doi.org/10.1201/9781420010749.ch30},
doi = {10.1201/9781420010749.CH30},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/crc/VenkatachalamF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChenEFS06,
author = {Duhong Chen and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca and
Michael J. Sanderson},
title = {Minimum-Flip Supertrees: Complexity and Algorithms},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {3},
number = {2},
pages = {165--173},
year = {2006},
url = {https://doi.org/10.1109/TCBB.2006.26},
doi = {10.1109/TCBB.2006.26},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChenEFS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/Fernandez-BacaV05,
author = {David Fern{\'{a}}ndez{-}Baca and
Balaji Venkatachalam},
editor = {Alberto Apostolico and
Maxime Crochemore and
Kunsoo Park},
title = {Parametric Analysis for Ungapped Markov Models of Evolution},
booktitle = {Combinatorial Pattern Matching, 16th Annual Symposium, {CPM} 2005,
Jeju Island, Korea, June 19-22, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3537},
pages = {394--405},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11496656\_34},
doi = {10.1007/11496656\_34},
timestamp = {Tue, 14 May 2019 10:00:38 +0200},
biburl = {https://dblp.org/rec/conf/cpm/Fernandez-BacaV05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenEF04,
author = {Duhong Chen and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca},
title = {Rainbow: a toolbox for phylogenetic supertree construction and analysis},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2872--2873},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth313},
doi = {10.1093/BIOINFORMATICS/BTH313},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenEF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/SunFY04,
author = {Fangting Sun and
David Fern{\'{a}}ndez{-}Baca and
Wei Yu},
title = {Inverse parametric sequence alignment},
journal = {J. Algorithms},
volume = {53},
number = {1},
pages = {36--54},
year = {2004},
url = {https://doi.org/10.1016/j.jalgor.2004.04.008},
doi = {10.1016/J.JALGOR.2004.04.008},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/SunFY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/Fernandez-BacaSS04,
author = {David Fern{\'{a}}ndez{-}Baca and
Timo Sepp{\"{a}}l{\"{a}}inen and
Giora Slutzki},
title = {Parametric multiple sequence alignment and phylogeny construction},
journal = {J. Discrete Algorithms},
volume = {2},
number = {2},
pages = {271--287},
year = {2004},
url = {https://doi.org/10.1016/S1570-8667(03)00078-9},
doi = {10.1016/S1570-8667(03)00078-9},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jda/Fernandez-BacaSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/Fernandez-BacaL03,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
title = {A Polynomial-Time Algorithm for Near-Perfect Phylogeny},
journal = {{SIAM} J. Comput.},
volume = {32},
number = {5},
pages = {1115--1127},
year = {2003},
url = {https://doi.org/10.1137/S0097539799350839},
doi = {10.1137/S0097539799350839},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/Fernandez-BacaL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/Fernandez-Baca03,
author = {David Fern{\'{a}}ndez{-}Baca},
title = {Decomposable multi-parameter matroid optimization problems},
journal = {Theor. Comput. Sci.},
volume = {297},
number = {1-3},
pages = {183--198},
year = {2003},
url = {https://doi.org/10.1016/S0304-3975(02)00638-2},
doi = {10.1016/S0304-3975(02)00638-2},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/Fernandez-Baca03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Fernandez-BacaSS02,
author = {David Fern{\'{a}}ndez{-}Baca and
Timo Sepp{\"{a}}l{\"{a}}inen and
Giora Slutzki},
title = {Bounds for parametric sequence comparison},
journal = {Discret. Appl. Math.},
volume = {118},
number = {3},
pages = {181--198},
year = {2002},
url = {https://doi.org/10.1016/S0166-218X(01)00206-2},
doi = {10.1016/S0166-218X(01)00206-2},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Fernandez-BacaSS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/SunFY02,
author = {Fangting Sun and
David Fern{\'{a}}ndez{-}Baca and
Wei Yu},
editor = {Oscar H. Ibarra and
Louxin Zhang},
title = {Inverse Parametric Sequence Alignment},
booktitle = {Computing and Combinatorics, 8th Annual International Conference,
{COCOON} 2002, Singapore, August 15-17, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2387},
pages = {97--106},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45655-4\_12},
doi = {10.1007/3-540-45655-4\_12},
timestamp = {Tue, 14 May 2019 10:00:35 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/SunFY02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/ChenEFS02,
author = {Duhong Chen and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca and
Michael J. Sanderson},
editor = {Oscar H. Ibarra and
Louxin Zhang},
title = {Supertrees by Flipping},
booktitle = {Computing and Combinatorics, 8th Annual International Conference,
{COCOON} 2002, Singapore, August 15-17, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2387},
pages = {391--400},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45655-4\_42},
doi = {10.1007/3-540-45655-4\_42},
timestamp = {Tue, 23 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/ChenEFS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/Fernandez-Baca01,
author = {David Fern{\'{a}}ndez{-}Baca},
title = {On Nonlinear Parametric Search},
journal = {Algorithmica},
volume = {30},
number = {1},
pages = {1--11},
year = {2001},
url = {https://doi.org/10.1007/s00453-001-0001-2},
doi = {10.1007/S00453-001-0001-2},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/Fernandez-Baca01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/ChenDEFS01,
author = {Duhong Chen and
Lixia Diao and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca and
Michael J. Sanderson},
editor = {Melvin F. Janowitz and
Fran{\c{c}}ois{-}Joseph Lapointe and
Fred R. McMorris and
Boris G. Mirkin and
Fred S. Roberts},
title = {Flipping: {A} supertree construction method},
booktitle = {Bioconsensus, Proceedings of a {DIMACS} Workshop, New Brunswick, New
Jersey, USA, 2001},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {61},
pages = {135--160},
publisher = {{DIMACS/AMS}},
year = {2001},
url = {https://doi.org/10.1090/dimacs/061/10},
doi = {10.1090/DIMACS/061/10},
timestamp = {Mon, 22 May 2023 16:07:34 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/ChenDEFS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/Fernandez-BacaSS00,
author = {David Fern{\'{a}}ndez{-}Baca and
Timo Sepp{\"{a}}l{\"{a}}inen and
Giora Slutzki},
editor = {Raffaele Giancarlo and
David Sankoff},
title = {Parametric Multiple Sequence Alignment and Phylogeny Construction},
booktitle = {Combinatorial Pattern Matching, 11th Annual Symposium, {CPM} 2000,
Montreal, Canada, June 21-23, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1848},
pages = {69--83},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-45123-4\_8},
doi = {10.1007/3-540-45123-4\_8},
timestamp = {Tue, 14 May 2019 10:00:38 +0200},
biburl = {https://dblp.org/rec/conf/cpm/Fernandez-BacaSS00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/latin/Fernandez-Baca00,
author = {David Fern{\'{a}}ndez{-}Baca},
editor = {Gaston H. Gonnet and
Daniel Panario and
Alfredo Viola},
title = {Multi-parameter Minimum Spanning Trees},
booktitle = {{LATIN} 2000: Theoretical Informatics, 4th Latin American Symposium,
Punta del Este, Uruguay, April 10-14, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1776},
pages = {217--226},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/10719839\_22},
doi = {10.1007/10719839\_22},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/latin/Fernandez-Baca00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spire/Fernandez-BacaSS99,
author = {David Fern{\'{a}}ndez{-}Baca and
Timo Sepp{\"{a}}l{\"{a}}inen and
Giora Slutzki},
editor = {Ricardo A. Baeza{-}Yates and
Edgar Ch{\'{a}}vez and
Jes{\'{u}}s Favela},
title = {Bounds for Parametric Sequence Comparison},
booktitle = {Sixth International Symposium on String Processing and Information
Retrieval and Fifth International Workshop on Groupware, {SPIRE/CRIWG}
1999, Cancun, Mexico, September 21-24, 1999},
pages = {55--62},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/SPIRE.1999.796578},
doi = {10.1109/SPIRE.1999.796578},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/spire/Fernandez-BacaSS99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Fernandez-BacaL98,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
title = {On the Approximability of the Steiner Tree Problem in Phylogeny},
journal = {Discret. Appl. Math.},
volume = {88},
number = {1-3},
pages = {129--145},
year = {1998},
url = {https://doi.org/10.1016/S0166-218X(98)00069-9},
doi = {10.1016/S0166-218X(98)00069-9},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Fernandez-BacaL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/latin/Fernandez-Baca98,
author = {David Fern{\'{a}}ndez{-}Baca},
editor = {Claudio L. Lucchesi and
Arnaldo V. Moura},
title = {Faster Non-linear Parametric Search with Applications to Optimazation
and Dynamic Geometry},
booktitle = {{LATIN} '98: Theoretical Informatics, Third Latin American Symposium,
Campinas, Brazil, April, 20-24, 1998, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1380},
pages = {33--41},
publisher = {Springer},
year = {1998},
url = {https://doi.org/10.1007/BFb0054308},
doi = {10.1007/BFB0054308},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/latin/Fernandez-Baca98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Fernandez-BacaS97,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
title = {Optimal Parametric Search on Graphs of Bounded Tree-Width},
journal = {J. Algorithms},
volume = {22},
number = {2},
pages = {212--240},
year = {1997},
url = {https://doi.org/10.1006/jagm.1996.0816},
doi = {10.1006/JAGM.1996.0816},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Fernandez-BacaS97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/Fernandez-BacaS97,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
title = {Linear-Time Algorithms for Parametric Minimum Spanning Tree Problems
on Planar Graphs},
journal = {Theor. Comput. Sci.},
volume = {181},
number = {1},
pages = {57--74},
year = {1997},
url = {https://doi.org/10.1016/S0304-3975(96)00262-9},
doi = {10.1016/S0304-3975(96)00262-9},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/Fernandez-BacaS97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/AgarwalaF96,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
title = {Simple Algorithms for Perfect Phylogeny and Triangulating Colored
Graphs},
journal = {Int. J. Found. Comput. Sci.},
volume = {7},
number = {1},
pages = {11--22},
year = {1996},
url = {https://doi.org/10.1142/S0129054196000038},
doi = {10.1142/S0129054196000038},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijfcs/AgarwalaF96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/njc/Fernandez-BacaSE96,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki and
David Eppstein},
title = {Using Sparsification for Parametric Minimum Spanning Tree Problems},
journal = {Nord. J. Comput.},
volume = {3},
number = {4},
pages = {352--366},
year = {1996},
timestamp = {Mon, 24 Jul 2006 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/njc/Fernandez-BacaSE96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/AgarwalaF96,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
title = {Weighted Multidimensional Search and Its Application to Convex Optimization},
journal = {{SIAM} J. Comput.},
volume = {25},
number = {1},
pages = {83--99},
year = {1996},
url = {https://doi.org/10.1137/S0097539792241928},
doi = {10.1137/S0097539792241928},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamcomp/AgarwalaF96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/Fernandez-BacaL96,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
editor = {Friedhelm Meyer auf der Heide and
Burkhard Monien},
title = {A Polynomial-Time Algorithm for Near-Perfect Phylogeny},
booktitle = {Automata, Languages and Programming, 23rd International Colloquium,
ICALP96, Paderborn, Germany, 8-12 July 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1099},
pages = {670--680},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61440-0\_168},
doi = {10.1007/3-540-61440-0\_168},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/Fernandez-BacaL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/Fernandez-BacaL96,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
editor = {Tetsuo Asano and
Yoshihide Igarashi and
Hiroshi Nagamochi and
Satoru Miyano and
Subhash Suri},
title = {On the Approximability of the Steiner Tree Problem in Phylogeny},
booktitle = {Algorithms and Computation, 7th International Symposium, {ISAAC} '96,
Osaka, Japan, December 16-18, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1178},
pages = {65--74},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/BFb0009482},
doi = {10.1007/BFB0009482},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/Fernandez-BacaL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/Fernandez-BacaSE96,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki and
David Eppstein},
editor = {Rolf G. Karlsson and
Andrzej Lingas},
title = {Using Sparsification for Parametric Minimum Spanning Tree Problems},
booktitle = {Algorithm Theory - {SWAT} '96, 5th Scandinavian Workshop on Algorithm
Theory, Reykjav{\'{\i}}k, Iceland, July 3-5, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1097},
pages = {149--160},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61422-2\_128},
doi = {10.1007/3-540-61422-2\_128},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/Fernandez-BacaSE96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/AgarwalaF95,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
title = {Weighted Search in the Plane},
journal = {Inf. Process. Lett.},
volume = {54},
number = {2},
pages = {97--100},
year = {1995},
url = {https://doi.org/10.1016/0020-0190(94)00236-R},
doi = {10.1016/0020-0190(94)00236-R},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ipl/AgarwalaF95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AgarwalaFS95,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
title = {Fast Algorithms for Inferring Evolutionary Trees},
journal = {J. Comput. Biol.},
volume = {2},
number = {3},
pages = {397--407},
year = {1995},
url = {https://doi.org/10.1089/cmb.1995.2.397},
doi = {10.1089/CMB.1995.2.397},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/AgarwalaFS95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/latin/Fernandez-BacaS95,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
editor = {Ricardo A. Baeza{-}Yates and
Eric Goles Ch. and
Patricio V. Poblete},
title = {Linear-Time Algorithms for Parametric Minimum Spanning Tree Problems
on Planar Graphs},
booktitle = {{LATIN} '95: Theoretical Informatics, Second Latin American Symposium,
Valpara{\'{\i}}so, Chile, April 3-7, 1995, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {911},
pages = {257--271},
publisher = {Springer},
year = {1995},
url = {https://doi.org/10.1007/3-540-59175-3\_94},
doi = {10.1007/3-540-59175-3\_94},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/latin/Fernandez-BacaS95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Fernandez-BacaS94,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
title = {Parametric Problems on Graphs of Bounded Tree-Width},
journal = {J. Algorithms},
volume = {16},
number = {3},
pages = {408--430},
year = {1994},
url = {https://doi.org/10.1006/jagm.1994.1019},
doi = {10.1006/JAGM.1994.1019},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Fernandez-BacaS94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/AgarwalaF94,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
title = {A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when
the Number of Character States is Fixed},
journal = {{SIAM} J. Comput.},
volume = {23},
number = {6},
pages = {1216--1224},
year = {1994},
url = {https://doi.org/10.1137/S0097539793244587},
doi = {10.1137/S0097539793244587},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamcomp/AgarwalaF94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/Fernandez-BacaS94,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
editor = {Erik Meineche Schmidt and
Sven Skyum},
title = {Optimal Parametric Search on Graphs of Bounded Tree-Width},
booktitle = {Algorithm Theory - {SWAT} '94, 4th Scandinavian Workshop on Algorithm
Theory, Aarhus, Denmark, July 6-8, 1994, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {824},
pages = {155--166},
publisher = {Springer},
year = {1994},
url = {https://doi.org/10.1007/3-540-58218-5\_14},
doi = {10.1007/3-540-58218-5\_14},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/Fernandez-BacaS94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tc/Fernandez-BacaM93,
author = {David Fern{\'{a}}ndez{-}Baca and
A. Medepalli},
title = {Parametric Module Allocation on Partial k-Trees},
journal = {{IEEE} Trans. Computers},
volume = {42},
number = {6},
pages = {738--742},
year = {1993},
url = {https://doi.org/10.1109/12.277293},
doi = {10.1109/12.277293},
timestamp = {Sat, 20 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tc/Fernandez-BacaM93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/focs/AgarwalaF93,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
title = {A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when
the Number of Character States is Fixed},
booktitle = {34th Annual Symposium on Foundations of Computer Science, Palo Alto,
California, USA, 3-5 November 1993},
pages = {140--147},
publisher = {{IEEE} Computer Society},
year = {1993},
url = {https://doi.org/10.1109/SFCS.1993.366873},
doi = {10.1109/SFCS.1993.366873},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/focs/AgarwalaF93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fsttcs/AgarwalaF92,
author = {Richa Agarwala and
David Fern{\'{a}}ndez{-}Baca},
editor = {R. K. Shyamasundar},
title = {Solving the Lagrangian Dual when the Number of Constraints is Fixed},
booktitle = {Foundations of Software Technology and Theoretical Computer Science,
12th Conference, New Delhi, India, December 18-20, 1992, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {652},
pages = {164--175},
publisher = {Springer},
year = {1992},
url = {https://doi.org/10.1007/3-540-56287-7\_103},
doi = {10.1007/3-540-56287-7\_103},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fsttcs/AgarwalaF92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/Fernandez-BacaS92,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
editor = {Otto Nurmi and
Esko Ukkonen},
title = {Parametric Problems on Graphs of Bounded Tree-Width},
booktitle = {Algorithm Theory - {SWAT} '92, Third Scandinavian Workshop on Algorithm
Theory, Helsinki, Finland, July 8-10, 1992, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {621},
pages = {304--316},
publisher = {Springer},
year = {1992},
url = {https://doi.org/10.1007/3-540-55706-7\_26},
doi = {10.1007/3-540-55706-7\_26},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/Fernandez-BacaS92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/Fernandez-BacaW91,
author = {David Fern{\'{a}}ndez{-}Baca and
Mark A. Williams},
title = {On Matroids and Hierarchical Graphs},
journal = {Inf. Process. Lett.},
volume = {38},
number = {3},
pages = {117--121},
year = {1991},
url = {https://doi.org/10.1016/0020-0190(91)90232-7},
doi = {10.1016/0020-0190(91)90232-7},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/Fernandez-BacaW91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/orl/Fernandez-BacaS91,
author = {David Fern{\'{a}}ndez{-}Baca and
S. Srinivasan},
title = {Constructing the minimization diagram of a two-parameter problem},
journal = {Oper. Res. Lett.},
volume = {10},
number = {2},
pages = {87--93},
year = {1991},
url = {https://doi.org/10.1016/0167-6377(91)90092-4},
doi = {10.1016/0167-6377(91)90092-4},
timestamp = {Fri, 31 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/orl/Fernandez-BacaS91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/Fernandez-Baca90,
author = {David Fern{\'{a}}ndez{-}Baca},
editor = {John R. Gilbert and
Rolf G. Karlsson},
title = {Space-Sweep Algorithms for Parametric Optimization (Extended Abstract)},
booktitle = {{SWAT} 90, 2nd Scandinavian Workshop on Algorithm Theory, Bergen,
Norway, July 11-14, 1990, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {447},
pages = {264--275},
publisher = {Springer},
year = {1990},
url = {https://doi.org/10.1007/3-540-52846-6\_95},
doi = {10.1007/3-540-52846-6\_95},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/Fernandez-Baca90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/Fernandez-BacaW90,
author = {David Fern{\'{a}}ndez{-}Baca and
Mark A. Williams},
editor = {John R. Gilbert and
Rolf G. Karlsson},
title = {On Matroids and Hierarchical Graphs},
booktitle = {{SWAT} 90, 2nd Scandinavian Workshop on Algorithm Theory, Bergen,
Norway, July 11-14, 1990, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {447},
pages = {320--331},
publisher = {Springer},
year = {1990},
url = {https://doi.org/10.1007/3-540-52846-6\_101},
doi = {10.1007/3-540-52846-6\_101},
timestamp = {Fri, 19 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/swat/Fernandez-BacaW90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/Fernandez-BacaM89,
author = {David Fern{\'{a}}ndez{-}Baca and
Charles U. Martel},
title = {On the Efficiency of Maximum-Flow Algorithms on Networks with Small
Integer Capacities},
journal = {Algorithmica},
volume = {4},
number = {2},
pages = {173--189},
year = {1989},
url = {https://doi.org/10.1007/BF01553885},
doi = {10.1007/BF01553885},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/Fernandez-BacaM89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Fernandez-BacaS89,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
title = {Solving Parametric Problems on Trees},
journal = {J. Algorithms},
volume = {10},
number = {3},
pages = {381--402},
year = {1989},
url = {https://doi.org/10.1016/0196-6774(89)90035-7},
doi = {10.1016/0196-6774(89)90035-7},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Fernandez-BacaS89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tse/Fernandez-Baca89,
author = {David Fern{\'{a}}ndez{-}Baca},
title = {Allocating Modules to Processors in a Distributed System},
journal = {{IEEE} Trans. Software Eng.},
volume = {15},
number = {11},
pages = {1427--1436},
year = {1989},
url = {https://doi.org/10.1109/32.41334},
doi = {10.1109/32.41334},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tse/Fernandez-Baca89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/Fernandez-BacaW89,
author = {David Fern{\'{a}}ndez{-}Baca and
Mark A. Williams},
editor = {Frank K. H. A. Dehne and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Nicola Santoro},
title = {Augmentation Problems on Hierarchically Defined Graphs (Preliminary
Version)},
booktitle = {Algorithms and Data Structures, Workshop {WADS} '89, Ottawa, Canada,
August 17-19, 1989, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {382},
pages = {563--576},
publisher = {Springer},
year = {1989},
url = {https://doi.org/10.1007/3-540-51542-9\_47},
doi = {10.1007/3-540-51542-9\_47},
timestamp = {Fri, 17 Jul 2020 16:12:48 +0200},
biburl = {https://dblp.org/rec/conf/wads/Fernandez-BacaW89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/Fernandez-Baca88,
author = {David Fern{\'{a}}ndez{-}Baca},
title = {Nonserial Dynamic Programming Formulations of Satisfiability},
journal = {Inf. Process. Lett.},
volume = {27},
number = {6},
pages = {323--326},
year = {1988},
url = {https://doi.org/10.1016/0020-0190(88)90221-9},
doi = {10.1016/0020-0190(88)90221-9},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/Fernandez-Baca88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/Fernandez-BacaS88,
author = {David Fern{\'{a}}ndez{-}Baca and
Giora Slutzki},
editor = {Robert Cori and
Martin Wirsing},
title = {Solving Parametric Problems on Trees},
booktitle = {{STACS} 88, 5th Annual Symposium on Theoretical Aspects of Computer
Science, Bordeaux, France, February 11-13, 1988, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {294},
pages = {52--60},
publisher = {Springer},
year = {1988},
url = {https://doi.org/10.1007/BFb0035831},
doi = {10.1007/BFB0035831},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/stacs/Fernandez-BacaS88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/GusfieldMF87,
author = {Dan Gusfield and
Charles U. Martel and
David Fern{\'{a}}ndez{-}Baca},
title = {Fast Algorithms for Bipartite Network Flow},
journal = {{SIAM} J. Comput.},
volume = {16},
number = {2},
pages = {237--251},
year = {1987},
url = {https://doi.org/10.1137/0216020},
doi = {10.1137/0216020},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/GusfieldMF87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
a service of 
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
last updated on 2024-04-25 05:44 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
