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ORCIDBibTeX records: Steven A. Hofmeyr
@inproceedings{DBLP:conf/acda/McCoyHY023,
author = {Hunter McCoy and
Steven A. Hofmeyr and
Katherine A. Yelick and
Prashant Pandey},
editor = {Jonathan W. Berry and
David B. Shmoys and
Lenore Cowen and
Uwe Naumann},
title = {Singleton Sieving: Overcoming the Memory/Speed Trade-Off in Exascale
\emph{{\(\kappa\)}}-mer Analysis},
booktitle = {{SIAM} Conference on Applied and Computational Discrete Algorithms,
{ACDA} 2023, Seattle, WA, USA, May 31 - June 2, 2023},
pages = {213--224},
publisher = {{SIAM}},
year = {2023},
url = {https://doi.org/10.1137/1.9781611977714.19},
doi = {10.1137/1.9781611977714.19},
timestamp = {Tue, 17 Oct 2023 16:38:11 +0200},
biburl = {https://dblp.org/rec/conf/acda/McCoyHY023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/PopoviciAGEHOY23,
author = {Doru{-}Thom Popovici and
Muaaz Gul Awan and
Giulia Guidi and
Rob Egan and
Steven A. Hofmeyr and
Leonid Oliker and
Katherine A. Yelick},
title = {Designing Efficient {SIMD} Kernels for High Performance Sequence Alignment},
booktitle = {{IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2023 - Workshops, St. Petersburg, FL, USA, May 15-19, 2023},
pages = {167--176},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/IPDPSW59300.2023.00038},
doi = {10.1109/IPDPSW59300.2023.00038},
timestamp = {Wed, 09 Aug 2023 16:25:12 +0200},
biburl = {https://dblp.org/rec/conf/ipps/PopoviciAGEHOY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppopp/McCoyHY023,
author = {Hunter McCoy and
Steven A. Hofmeyr and
Katherine A. Yelick and
Prashant Pandey},
editor = {Maryam Mehri Dehnavi and
Milind Kulkarni and
Sriram Krishnamoorthy},
title = {High-Performance Filters for GPUs},
booktitle = {Proceedings of the 28th {ACM} {SIGPLAN} Annual Symposium on Principles
and Practice of Parallel Programming, PPoPP 2023, Montreal, QC, Canada,
25 February 2023 - 1 March 2023},
pages = {160--173},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3572848.3577507},
doi = {10.1145/3572848.3577507},
timestamp = {Wed, 22 Feb 2023 11:36:02 +0100},
biburl = {https://dblp.org/rec/conf/ppopp/McCoyHY023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iiswc/LiouAHFW22,
author = {Jhe{-}Yu Liou and
Muaaz Awan and
Steven A. Hofmeyr and
Stephanie Forrest and
Carole{-}Jean Wu},
title = {Understanding the Power of Evolutionary Computation for {GPU} Code
Optimization},
booktitle = {{IEEE} International Symposium on Workload Characterization, {IISWC}
2022, Austin, TX, USA, November 6-8, 2022},
pages = {185--198},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/IISWC55918.2022.00025},
doi = {10.1109/IISWC55918.2022.00025},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iiswc/LiouAHFW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-12350,
author = {Jhe{-}Yu Liou and
Muaaz Awan and
Steven A. Hofmeyr and
Stephanie Forrest and
Carole{-}Jean Wu},
title = {Understanding the Power of Evolutionary Computation for {GPU} Code
Optimization},
journal = {CoRR},
volume = {abs/2208.12350},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.12350},
doi = {10.48550/ARXIV.2208.12350},
eprinttype = {arXiv},
eprint = {2208.12350},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-12350.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2212-09005,
author = {Hunter McCoy and
Steven A. Hofmeyr and
Katherine A. Yelick and
Prashant Pandey},
title = {High-Performance Filters For GPUs},
journal = {CoRR},
volume = {abs/2212.09005},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2212.09005},
doi = {10.48550/ARXIV.2212.09005},
eprinttype = {arXiv},
eprint = {2212.09005},
timestamp = {Mon, 02 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2212-09005.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/MosesHCAGHLPSTF21,
author = {Melanie E. Moses and
Steven A. Hofmeyr and
Judy L. Cannon and
Akil Andrews and
Rebekah Gridley and
Monica Hinga and
Kirtus G. Leyba and
Abigail Pribisova and
Vanessa Surjadidjaja and
Humayra Tasnim and
Stephanie Forrest},
title = {Spatially distributed infection increases viral load in a computational
model of SARS-CoV-2 lung infection},
journal = {PLoS Comput. Biol.},
volume = {17},
number = {12},
year = {2021},
url = {https://doi.org/10.1371/journal.pcbi.1009735},
doi = {10.1371/JOURNAL.PCBI.1009735},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/MosesHCAGHLPSTF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/AwanHEDBDOY21,
author = {Muaaz Gul Awan and
Steven A. Hofmeyr and
Rob Egan and
Nan Ding and
Aydin Bulu{\c{c}} and
Jack Deslippe and
Leonid Oliker and
Katherine A. Yelick},
editor = {Bronis R. de Supinski and
Mary W. Hall and
Todd Gamblin},
title = {Accelerating large scale \emph{de novo} metagenome assembly using
GPUs},
booktitle = {International Conference for High Performance Computing, Networking,
Storage and Analysis, {SC} 2021, St. Louis, Missouri, USA, November
14-19, 2021},
pages = {7},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3458817.3476212},
doi = {10.1145/3458817.3476212},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/AwanHEDBDOY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AwanDBSHOY20,
author = {Muaaz G. Awan and
Jack Deslippe and
Aydin Bulu{\c{c}} and
Oguz Selvitopi and
Steven A. Hofmeyr and
Leonid Oliker and
Katherine A. Yelick},
title = {{ADEPT:} a domain independent sequence alignment strategy for gpu
architectures},
journal = {{BMC} Bioinform.},
volume = {21},
number = {1},
pages = {406},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03720-1},
doi = {10.1186/S12859-020-03720-1},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AwanDBSHOY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/PeverelliTSDHBO20,
author = {Francesco Peverelli and
Lorenzo Di Tucci and
Marco D. Santambrogio and
Nan Ding and
Steven A. Hofmeyr and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Katherine A. Yelick},
title = {{GPU} accelerated partial order multiple sequence alignment for long
reads self-correction},
booktitle = {2020 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPSW} 2020, New Orleans, LA, USA, May 18-22, 2020},
pages = {174--182},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/IPDPSW50202.2020.00039},
doi = {10.1109/IPDPSW50202.2020.00039},
timestamp = {Mon, 29 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/PeverelliTSDHBO20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/ZeniGEDSHBOY20,
author = {Alberto Zeni and
Giulia Guidi and
Marquita Ellis and
Nan Ding and
Marco D. Santambrogio and
Steven A. Hofmeyr and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Katherine A. Yelick},
title = {{LOGAN:} High-Performance GPU-Based X-Drop Long-Read Alignment},
booktitle = {2020 {IEEE} International Parallel and Distributed Processing Symposium
(IPDPS), New Orleans, LA, USA, May 18-22, 2020},
pages = {462--471},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/IPDPS47924.2020.00055},
doi = {10.1109/IPDPS47924.2020.00055},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipps/ZeniGEDSHBOY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2001-06989,
author = {Katherine A. Yelick and
Aydin Bulu{\c{c}} and
Muaaz G. Awan and
Ariful Azad and
Benjamin Brock and
Rob Egan and
Saliya Ekanayake and
Marquita Ellis and
Evangelos Georganas and
Giulia Guidi and
Steven A. Hofmeyr and
Oguz Selvitopi and
Cristina Teodoropol and
Leonid Oliker},
title = {The Parallelism Motifs of Genomic Data Analysis},
journal = {CoRR},
volume = {abs/2001.06989},
year = {2020},
url = {https://arxiv.org/abs/2001.06989},
eprinttype = {arXiv},
eprint = {2001.06989},
timestamp = {Tue, 16 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2001-06989.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-05200,
author = {Alberto Zeni and
Giulia Guidi and
Marquita Ellis and
Nan Ding and
Marco D. Santambrogio and
Steven A. Hofmeyr and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Katherine A. Yelick},
title = {{LOGAN:} High-Performance GPU-Based X-Drop Long-Read Alignment},
journal = {CoRR},
volume = {abs/2002.05200},
year = {2020},
url = {https://arxiv.org/abs/2002.05200},
eprinttype = {arXiv},
eprint = {2002.05200},
timestamp = {Mon, 29 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-05200.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/BachanBHJKBHA19,
author = {John Bachan and
Scott B. Baden and
Steven A. Hofmeyr and
Mathias Jacquelin and
Amir Kamil and
Dan Bonachea and
Paul H. Hargrove and
Hadia Ahmed},
title = {{UPC++:} {A} High-Performance Communication Framework for Asynchronous
Computation},
booktitle = {2019 {IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2019, Rio de Janeiro, Brazil, May 20-24, 2019},
pages = {963--973},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/IPDPS.2019.00104},
doi = {10.1109/IPDPS.2019.00104},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/BachanBHJKBHA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigbed/FerroniCHKS18,
author = {Matteo Ferroni and
Juan A. Colmenares and
Steven A. Hofmeyr and
John Kubiatowicz and
Marco D. Santambrogio},
title = {Enabling power-awareness for the Xen hypervisor},
journal = {{SIGBED} Rev.},
volume = {15},
number = {1},
pages = {36--42},
year = {2018},
url = {https://doi.org/10.1145/3199610.3199615},
doi = {10.1145/3199610.3199615},
timestamp = {Sun, 21 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sigbed/FerroniCHKS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpp/ImesHH18,
author = {Connor Imes and
Steven A. Hofmeyr and
Henry Hoffmann},
title = {Energy-efficient Application Resource Scheduling using Machine Learning
Classifiers},
booktitle = {Proceedings of the 47th International Conference on Parallel Processing,
{ICPP} 2018, Eugene, OR, USA, August 13-16, 2018},
pages = {45:1--45:11},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3225058.3225088},
doi = {10.1145/3225058.3225088},
timestamp = {Wed, 21 Nov 2018 12:44:17 +0100},
biburl = {https://dblp.org/rec/conf/icpp/ImesHH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/TucciCCHDS18,
author = {Lorenzo Di Tucci and
Davide Conficconi and
Alessandro Comodi and
Steven A. Hofmeyr and
David Donofrio and
Marco D. Santambrogio},
title = {A Parallel, Energy Efficient Hardware Architecture for the merAligner
on {FPGA} Using Chisel {HCL}},
booktitle = {2018 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2018, Vancouver, BC, Canada, May 21-25,
2018},
pages = {214--217},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/IPDPSW.2018.00041},
doi = {10.1109/IPDPSW.2018.00041},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/TucciCCHDS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/GeorganasEHGATB18,
author = {Evangelos Georganas and
Rob Egan and
Steven A. Hofmeyr and
Eugene Goltsman and
Bill Arndt and
Andrew Tritt and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Katherine A. Yelick},
title = {Extreme scale de novo metagenome assembly},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage, and Analysis, {SC} 2018, Dallas, TX, USA, November
11-16, 2018},
pages = {10:1--10:13},
publisher = {{IEEE} / {ACM}},
year = {2018},
url = {http://dl.acm.org/citation.cfm?id=3291670},
timestamp = {Mon, 12 Nov 2018 09:05:15 +0100},
biburl = {https://dblp.org/rec/conf/sc/GeorganasEHGATB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1809-07014,
author = {Evangelos Georganas and
Rob Egan and
Steven A. Hofmeyr and
Eugene Goltsman and
Bill Arndt and
Andrew Tritt and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Katherine A. Yelick},
title = {Extreme Scale De Novo Metagenome Assembly},
journal = {CoRR},
volume = {abs/1809.07014},
year = {2018},
url = {http://arxiv.org/abs/1809.07014},
eprinttype = {arXiv},
eprint = {1809.07014},
timestamp = {Fri, 05 Oct 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1809-07014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/taco/FerroniCDBCHKS17,
author = {Matteo Ferroni and
Andrea Corna and
Andrea Damiani and
Rolando Brondolin and
Juan A. Colmenares and
Steven A. Hofmeyr and
John Kubiatowicz and
Marco D. Santambrogio},
title = {Power Consumption Models for Multi-Tenant Server Infrastructures},
journal = {{ACM} Trans. Archit. Code Optim.},
volume = {14},
number = {4},
pages = {38:1--38:22},
year = {2017},
url = {https://doi.org/10.1145/3148965},
doi = {10.1145/3148965},
timestamp = {Sat, 08 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/taco/FerroniCDBCHKS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/EllisGEHBCOY17,
author = {Marquita Ellis and
Evangelos Georganas and
Rob Egan and
Steven A. Hofmeyr and
Aydin Bulu{\c{c}} and
Brandon Cook and
Leonid Oliker and
Katherine A. Yelick},
editor = {Francisco F. Rivera and
Tom{\'{a}}s F. Pena and
Jos{\'{e}} Carlos Cabaleiro},
title = {Performance Characterization of De Novo Genome Assembly on Leading
Parallel Systems},
booktitle = {Euro-Par 2017: Parallel Processing - 23rd International Conference
on Parallel and Distributed Computing, Santiago de Compostela, Spain,
August 28 - September 1, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10417},
pages = {79--91},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-64203-1\_6},
doi = {10.1007/978-3-319-64203-1\_6},
timestamp = {Tue, 30 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/europar/EllisGEHBCOY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/GeorganasEEHBCO17,
author = {Evangelos Georganas and
Marquita Ellis and
Rob Egan and
Steven A. Hofmeyr and
Aydin Bulu{\c{c}} and
Brandon Cook and
Leonid Oliker and
Katherine A. Yelick},
editor = {Karla Morris and
Costin Iancu and
Salvatore Filippone and
Bradford L. Chamberlain and
Bill Long},
title = {MerBench: {PGAS} Benchmarks for High Performance Genome Assembly},
booktitle = {Proceedings of PAW@SC 2017: Second Annual {PGAS} Applications Workshop,
Held in conjunction with {SC17:} The International Conference for
High Performance Computing, Networking, Storage and Analysis, Denver,
Colorado, USA, November 12-17, 2017},
pages = {5:1--5:4},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3144779.3169109},
doi = {10.1145/3144779.3169109},
timestamp = {Tue, 30 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/GeorganasEEHBCO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/BachanBHHJKSB17,
author = {John Bachan and
Dan Bonachea and
Paul Hargrove and
Steven A. Hofmeyr and
Mathias Jacquelin and
Amir Kamil and
Brian van Straalen and
Scott B. Baden},
editor = {Karla Morris and
Costin Iancu and
Salvatore Filippone and
Bradford L. Chamberlain and
Bill Long},
title = {The {UPC++} {PGAS} library for Exascale Computing},
booktitle = {Proceedings of PAW@SC 2017: Second Annual {PGAS} Applications Workshop,
Held in conjunction with {SC17:} The International Conference for
High Performance Computing, Networking, Storage and Analysis, Denver,
Colorado, USA, November 12-17, 2017},
pages = {7:1--7:4},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3144779.3169108},
doi = {10.1145/3144779.3169108},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/BachanBHHJKSB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/GeorganasHEBORY17,
author = {Evangelos Georganas and
Steven A. Hofmeyr and
Rob Egan and
Aydin Bulu{\c{c}} and
Leonid Oliker and
Daniel Rokhsar and
Katherine A. Yelick},
title = {Extreme-Scale De Novo Genome Assembly},
journal = {CoRR},
volume = {abs/1705.11147},
year = {2017},
url = {http://arxiv.org/abs/1705.11147},
eprinttype = {arXiv},
eprint = {1705.11147},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/GeorganasHEBORY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cybersecurity/EdwardsHF16,
author = {Benjamin Edwards and
Steven A. Hofmeyr and
Stephanie Forrest},
title = {Hype and heavy tails: {A} closer look at data breaches},
journal = {J. Cybersecur.},
volume = {2},
number = {1},
pages = {3--14},
year = {2016},
url = {https://doi.org/10.1093/cybsec/tyw003},
doi = {10.1093/CYBSEC/TYW003},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cybersecurity/EdwardsHF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ewili/FerroniCHKS16,
author = {Matteo Ferroni and
Juan A. Colmenares and
Steven A. Hofmeyr and
John Kubiatowicz and
Marco D. Santambrogio},
editor = {Jalil Boukhobza and
Marco D. Santambrogio and
Frank Singhoff},
title = {Enabling Power-Awareness for the Xen Hypervisor},
booktitle = {Proceedings of the Embedded Operating Systems Workshop co-located
with the Embedded Systems Week {(ESWEEK} 2016), Pittsburgh PA, USA,
October 6, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1697},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1697/EWiLi16\_10.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:01 +0100},
biburl = {https://dblp.org/rec/conf/ewili/FerroniCHKS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpcc/HofmeyrICRA16,
author = {Steven A. Hofmeyr and
Costin Iancu and
Juan A. Colmenares and
Eric Roman and
Brian Austin},
editor = {Jinjun Chen and
Laurence T. Yang},
title = {Time-Sharing Redux for Large-Scale {HPC} Systems},
booktitle = {18th {IEEE} International Conference on High Performance Computing
and Communications; 14th {IEEE} International Conference on Smart
City; 2nd {IEEE} International Conference on Data Science and Systems,
HPCC/SmartCity/DSS 2016, Sydney, Australia, December 12-14, 2016},
pages = {301--308},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/HPCC-SmartCity-DSS.2016.0051},
doi = {10.1109/HPCC-SMARTCITY-DSS.2016.0051},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpcc/HofmeyrICRA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acsac/EdwardsHFE15,
author = {Benjamin Edwards and
Steven A. Hofmeyr and
Stephanie Forrest and
Michel van Eeten},
title = {Analyzing and Modeling Longitudinal Security Data: Promise and Pitfalls},
booktitle = {Proceedings of the 31st Annual Computer Security Applications Conference,
Los Angeles, CA, USA, December 7-11, 2015},
pages = {391--400},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2818000.2818010},
doi = {10.1145/2818000.2818010},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/acsac/EdwardsHFE15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/GeorganasBCHAEO15,
author = {Evangelos Georganas and
Aydin Bulu{\c{c}} and
Jarrod Chapman and
Steven A. Hofmeyr and
Chaitanya Aluru and
Rob Egan and
Leonid Oliker and
Daniel Rokhsar and
Katherine A. Yelick},
editor = {Jackie Kern and
Jeffrey S. Vetter},
title = {HipMer: an extreme-scale de novo genome assembler},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage and Analysis, {SC} 2015, Austin, TX, USA, November
15-20, 2015},
pages = {14:1--14:11},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2807591.2807664},
doi = {10.1145/2807591.2807664},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/GeorganasBCHAEO15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/weis/EdwardsHF15,
author = {Benjamin Edwards and
Steven A. Hofmeyr and
Stephanie Forrest},
title = {Hype and Heavy Tails: {A} Closer Look at Data Breaches},
booktitle = {14th Annual Workshop on the Economics of Information Security, {WEIS}
2015, Delft, The Netherlands, 22-23 June, 2015},
year = {2015},
url = {http://www.econinfosec.org/archive/weis2015/papers/WEIS\_2015\_edwards.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/weis/EdwardsHF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tpds/IbrahimHI14,
author = {Khaled Z. Ibrahim and
Steven A. Hofmeyr and
Costin Iancu},
title = {The Case for Partitioning Virtual Machines on Multicore Architectures},
journal = {{IEEE} Trans. Parallel Distributed Syst.},
volume = {25},
number = {10},
pages = {2683--2696},
year = {2014},
url = {https://doi.org/10.1109/TPDS.2013.242},
doi = {10.1109/TPDS.2013.242},
timestamp = {Fri, 02 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tpds/IbrahimHI14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cluster/HofmeyrCIK13,
author = {Steven A. Hofmeyr and
Juan A. Colmenares and
Costin Iancu and
John Kubiatowicz},
title = {Juggle: addressing extrinsic load imbalances in {SPMD} applications
on multicore computers},
journal = {Clust. Comput.},
volume = {16},
number = {2},
pages = {299--319},
year = {2013},
url = {https://doi.org/10.1007/s10586-012-0204-0},
doi = {10.1007/S10586-012-0204-0},
timestamp = {Tue, 29 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cluster/HofmeyrCIK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dac/ColmenaresEHBMCGRBMAK13,
author = {Juan A. Colmenares and
Gage Eads and
Steven A. Hofmeyr and
Sarah Bird and
Miquel Moret{\'{o}} and
David Chou and
Brian Gluzman and
Eric Roman and
Davide B. Bartolini and
Nitesh Mor and
Krste Asanovic and
John Kubiatowicz},
title = {Tessellation: refactoring the {OS} around explicit resource containers
with continuous adaptation},
booktitle = {The 50th Annual Design Automation Conference 2013, {DAC} '13, Austin,
TX, USA, May 29 - June 07, 2013},
pages = {76:1--76:10},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2463209.2488827},
doi = {10.1145/2463209.2488827},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dac/ColmenaresEHBMCGRBMAK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nspw/EdwardsMSHF12,
author = {Benjamin Edwards and
Tyler Moore and
George Stelle and
Steven A. Hofmeyr and
Stephanie Forrest},
editor = {Richard Ford and
Mary Ellen Zurko and
Cormac Herley and
Tara Whalen},
title = {Beyond the blacklist: modeling malware spread and the effect of interventions},
booktitle = {The New Security Paradigms Workshop, {NSPW} '12, Bertinoro, Italy
- September 18 - 21, 2012},
pages = {53--66},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2413296.2413302},
doi = {10.1145/2413296.2413302},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/nspw/EdwardsMSHF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1202-3987,
author = {Benjamin Edwards and
Tyler Moore and
George Stelle and
Steven A. Hofmeyr and
Stephanie Forrest},
title = {Beyond the Blacklist: Modeling Malware Spread and the Effect of Interventions},
journal = {CoRR},
volume = {abs/1202.3987},
year = {2012},
url = {http://arxiv.org/abs/1202.3987},
eprinttype = {arXiv},
eprint = {1202.3987},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1202-3987.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1202-3993,
author = {Benjamin Edwards and
Steven A. Hofmeyr and
George Stelle and
Stephanie Forrest},
title = {Internet Topology over Time},
journal = {CoRR},
volume = {abs/1202.3993},
year = {2012},
url = {http://arxiv.org/abs/1202.3993},
eprinttype = {arXiv},
eprint = {1202.3993},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1202-3993.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1202-4008,
author = {Steven A. Hofmeyr and
Tyler Moore and
Stephanie Forrest and
Benjamin Edwards and
George Stelle},
title = {Modeling Internet-Scale Policies for Cleaning up Malware},
journal = {CoRR},
volume = {abs/1202.4008},
year = {2012},
url = {http://arxiv.org/abs/1202.4008},
eprinttype = {arXiv},
eprint = {1202.4008},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1202-4008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/IbrahimHI11,
author = {Khaled Z. Ibrahim and
Steven A. Hofmeyr and
Costin Iancu},
title = {Characterizing the Performance of Parallel Applications on Multi-socket
Virtual Machines},
booktitle = {11th {IEEE/ACM} International Symposium on Cluster, Cloud and Grid
Computing, CCGrid 2011, Newport Beach, CA, USA, May 23-26, 2011},
pages = {1--12},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/CCGrid.2011.50},
doi = {10.1109/CCGRID.2011.50},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/IbrahimHI11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hotchips/ColmenaresBEHKP11,
author = {Juan A. Colmenares and
Sarah Bird and
Gage Eads and
Steven A. Hofmeyr and
Albert Kim and
Rohit Poddar and
Hilfi Alkaff and
Krste Asanovic and
John Kubiatowicz},
title = {Tessellation operating system: Building a real-time, responsive, high-throughput
client {OS} for many-core architectures},
booktitle = {2011 {IEEE} Hot Chips 23 Symposium (HCS), Stanford, CA, USA, August
17-19, 2011},
pages = {1},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.ieeecomputersociety.org/10.1109/HOTCHIPS.2011.7477518},
doi = {10.1109/HOTCHIPS.2011.7477518},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hotchips/ColmenaresBEHKP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/HofmeyrCIK11,
author = {Steven A. Hofmeyr and
Juan A. Colmenares and
Costin Iancu and
John Kubiatowicz},
editor = {Arthur B. Maccabe and
Douglas Thain},
title = {Juggle: proactive load balancing on multicore computers},
booktitle = {Proceedings of the 20th {ACM} International Symposium on High Performance
Distributed Computing, {HPDC} 2011, San Jose, CA, USA, June 8-11,
2011},
pages = {3--14},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/1996130.1996134},
doi = {10.1145/1996130.1996134},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/HofmeyrCIK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/IbrahimHIR11,
author = {Khaled Z. Ibrahim and
Steven A. Hofmeyr and
Costin Iancu and
Eric Roman},
editor = {Scott A. Lathrop and
Jim Costa and
William Kramer},
title = {Optimized pre-copy live migration for memory intensive applications},
booktitle = {Conference on High Performance Computing Networking, Storage and Analysis,
{SC} 2011, Seattle, WA, USA, November 12-18, 2011},
pages = {40:1--40:11},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2063384.2063437},
doi = {10.1145/2063384.2063437},
timestamp = {Fri, 03 Jul 2020 08:57:23 +0200},
biburl = {https://dblp.org/rec/conf/sc/IbrahimHIR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/weis/HofmeyrMFES11,
author = {Steven A. Hofmeyr and
Tyler Moore and
Stephanie Forrest and
Benjamin Edwards and
George Stelle},
title = {Modeling Internet-Scale Policies for Cleaning up Malware},
booktitle = {10th Annual Workshop on the Economics of Information Security, {WEIS}
2011, George Mason University, Fairfax, VA, USA, June 14-15, 2011},
year = {2011},
url = {http://weis2011.econinfosec.org/papers/Modeling\%20Internet-Scale\%20Policies\%20for\%20Cleaning\%20up\%20Malware.pdf},
timestamp = {Thu, 22 Jul 2021 16:15:44 +0200},
biburl = {https://dblp.org/rec/conf/weis/HofmeyrMFES11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/weis/HofmeyrMFES11a,
author = {Steven A. Hofmeyr and
Tyler Moore and
Stephanie Forrest and
Benjamin Edwards and
George Stelle},
editor = {Bruce Schneier},
title = {Modeling Internet-Scale Policies for Cleaning up Malware},
booktitle = {Economics of Information Security and Privacy {III} [papers from the
Tenth Workshop on Economics and Information Security, {WEIS} 2011]},
pages = {149--170},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-1-4614-1981-5\_7},
doi = {10.1007/978-1-4614-1981-5\_7},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/weis/HofmeyrMFES11a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/IancuHBZ10,
author = {Costin Iancu and
Steven A. Hofmeyr and
Filip Blagojevic and
Yili Zheng},
title = {Oversubscription on multicore processors},
booktitle = {24th {IEEE} International Symposium on Parallel and Distributed Processing,
{IPDPS} 2010, Atlanta, Georgia, USA, 19-23 April 2010 - Conference
Proceedings},
pages = {1--11},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/IPDPS.2010.5470434},
doi = {10.1109/IPDPS.2010.5470434},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/IancuHBZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppopp/HofmeyrIB10,
author = {Steven A. Hofmeyr and
Costin Iancu and
Filip Blagojevic},
editor = {R. Govindarajan and
David A. Padua and
Mary W. Hall},
title = {Load balancing on speed},
booktitle = {Proceedings of the 15th {ACM} {SIGPLAN} Symposium on Principles and
Practice of Parallel Programming, {PPOPP} 2010, Bangalore, India,
January 9-14, 2010},
pages = {147--158},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1693453.1693475},
doi = {10.1145/1693453.1693475},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ppopp/HofmeyrIB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/IEEEpact/IancuH08,
author = {Costin Iancu and
Steven A. Hofmeyr},
editor = {Andreas Moshovos and
David Tarditi and
Kunle Olukotun},
title = {Runtime optimization of vector operations on large scale {SMP} clusters},
booktitle = {17th International Conference on Parallel Architectures and Compilation
Techniques, {PACT} 2008, Toronto, Ontario, Canada, October 25-29,
2008},
pages = {122--132},
publisher = {{ACM}},
year = {2008},
url = {https://doi.org/10.1145/1454115.1454134},
doi = {10.1145/1454115.1454134},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/IEEEpact/IancuH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acsac/ForrestAHS08,
author = {Stephanie Forrest and
Steven A. Hofmeyr and
Anil Somayaji},
title = {The Evolution of System-Call Monitoring},
booktitle = {Twenty-Fourth Annual Computer Security Applications Conference, {ACSAC}
2008, Anaheim, California, USA, 8-12 December 2008},
pages = {418--430},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ACSAC.2008.54},
doi = {10.1109/ACSAC.2008.54},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/acsac/ForrestAHS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/Hofmeyr07,
author = {Steven A. Hofmeyr},
editor = {Harold F. Tipton and
Micki Krause},
title = {Why Today},
booktitle = {Information security management handbook, Sixth Edition},
pages = {2623--2628},
publisher = {Auerbach Publ./CRC Press},
year = {2007},
url = {https://doi.org/10.1201/9781439833032.ch198},
doi = {10.1201/9781439833032.CH198},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/crc/Hofmeyr07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compsec/Hofmeyr05,
author = {Steven A. Hofmeyr},
title = {Host intrusion prevention: Part of the operating system or on top
of the operating system?},
journal = {Comput. Secur.},
volume = {24},
number = {6},
pages = {440--442},
year = {2005},
url = {https://doi.org/10.1016/j.cose.2005.07.004},
doi = {10.1016/J.COSE.2005.07.004},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/compsec/Hofmeyr05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compsec/Hofmeyr04,
author = {Steven A. Hofmeyr},
title = {The implications of immunology for secure systems design},
journal = {Comput. Secur.},
volume = {23},
number = {6},
pages = {453--455},
year = {2004},
url = {https://doi.org/10.1016/j.cose.2004.06.006},
doi = {10.1016/J.COSE.2004.06.006},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/compsec/Hofmeyr04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isjgp/Hofmeyr03,
author = {Steven A. Hofmeyr},
title = {Why Today's Security Technologies Are So Inadequate: History, Implications,
and New Approaches},
journal = {Inf. Secur. J. {A} Glob. Perspect.},
volume = {12},
number = {1},
pages = {17--21},
year = {2003},
url = {https://doi.org/10.1201/1086/43325.12.1.20030301/41477.4},
doi = {10.1201/1086/43325.12.1.20030301/41477.4},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isjgp/Hofmeyr03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isjgp/Hofmeyr03a,
author = {Steven A. Hofmeyr},
title = {A New Approach to Security: Learning from Immunology},
journal = {Inf. Secur. J. {A} Glob. Perspect.},
volume = {12},
number = {4},
pages = {29--35},
year = {2003},
url = {https://doi.org/10.1201/1086/43648.12.4.20030901/77303.6},
doi = {10.1201/1086/43648.12.4.20030901/77303.6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isjgp/Hofmeyr03a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ec/HofmeyrF00,
author = {Steven A. Hofmeyr and
Stephanie Forrest},
title = {Architecture for an Artificial Immune System},
journal = {Evol. Comput.},
volume = {8},
number = {4},
pages = {443--473},
year = {2000},
url = {https://doi.org/10.1162/106365600568257},
doi = {10.1162/106365600568257},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ec/HofmeyrF00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcs/HofmeyrFS98,
author = {Steven A. Hofmeyr and
Stephanie Forrest and
Anil Somayaji},
title = {Intrusion Detection Using Sequences of System Calls},
journal = {J. Comput. Secur.},
volume = {6},
number = {3},
pages = {151--180},
year = {1998},
url = {https://doi.org/10.3233/jcs-980109},
doi = {10.3233/JCS-980109},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcs/HofmeyrFS98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cacm/ForrestHS97,
author = {Stephanie Forrest and
Steven A. Hofmeyr and
Anil Somayaji},
title = {Computer Immunology},
journal = {Commun. {ACM}},
volume = {40},
number = {10},
pages = {88--96},
year = {1997},
url = {https://doi.org/10.1145/262793.262811},
doi = {10.1145/262793.262811},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cacm/ForrestHS97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/software/KosoresowH97,
author = {Andrew P. Kosoresow and
Steven A. Hofmeyr},
title = {Intrusion Detection via System Call Traces},
journal = {{IEEE} Softw.},
volume = {14},
number = {5},
pages = {35--42},
year = {1997},
url = {https://doi.org/10.1109/52.605929},
doi = {10.1109/52.605929},
timestamp = {Mon, 08 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/software/KosoresowH97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nspw/SomayajiHF97,
author = {Anil Somayaji and
Steven A. Hofmeyr and
Stephanie Forrest},
editor = {Tom Haigh and
Bob Blakley and
Mary Ellen Zurko and
Catherine Meodaws},
title = {Principles of a computer immune system},
booktitle = {Proceedings of the 1997 Workshop on New Security Paradigms, Langdale,
Cumbria, United Kingdom, September 23-26, 1997},
pages = {75--82},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/283699.283742},
doi = {10.1145/283699.283742},
timestamp = {Thu, 09 Sep 2021 18:23:55 +0200},
biburl = {https://dblp.org/rec/conf/nspw/SomayajiHF97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sp/ForrestHSL96,
author = {Stephanie Forrest and
Steven A. Hofmeyr and
Anil Somayaji and
Thomas A. Longstaff},
title = {A Sense of Self for Unix Processes},
booktitle = {1996 {IEEE} Symposium on Security and Privacy, May 6-8, 1996, Oakland,
CA, {USA}},
pages = {120--128},
publisher = {{IEEE} Computer Society},
year = {1996},
url = {https://doi.org/10.1109/SECPRI.1996.502675},
doi = {10.1109/SECPRI.1996.502675},
timestamp = {Thu, 21 Sep 2023 15:57:36 +0200},
biburl = {https://dblp.org/rec/conf/sp/ForrestHSL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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