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Neil Swainston
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Publications
- 2020
- [j19]Yash Khemchandani, Stephen O'Hagan, Soumitra Samanta, Neil Swainston, Timothy J. Roberts, Danushka Bollegala, Douglas B. Kell:
DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach. J. Cheminformatics 12(1): 53 (2020) - 2018
- [j18]Pablo Carbonell, Jerry Wong, Neil Swainston, Eriko Takano, Nicholas J. Turner, Nigel S. Scrutton, Douglas B. Kell, Rainer Breitling, Jean-Loup Faulon:
Selenzyme: enzyme selection tool for pathway design. Bioinform. 34(12): 2153-2154 (2018) - [j17]Neil Swainston, Mark Dunstan, Adrian J. Jervis, Christopher J. Robinson, Pablo Carbonell, Alan R. Williams, Jean-Loup Faulon, Nigel S. Scrutton, Douglas B. Kell:
PartsGenie: an integrated tool for optimizing and sharing synthetic biology parts. Bioinform. 34(13): 2327-2329 (2018) - 2017
- [j16]Neil Swainston, Andrew Currin, Lucy Green, Rainer Breitling, Philip J. Day, Douglas B. Kell:
CodonGenie: optimised ambiguous codon design tools. PeerJ Comput. Sci. 3: e120 (2017) - [i1]Neil Swainston, Andrew Currin, Lucy Green, Rainer Breitling, Philip J. Day, Douglas B. Kell:
CodonGenie: optimised ambiguous codon design tools. PeerJ Prepr. 5: e2797 (2017) - 2014
- [j13]Neil Swainston, Andrew Currin, Philip J. Day, Douglas B. Kell:
GeneGenie: optimized oligomer design for directed evolution. Nucleic Acids Res. 42(Webserver-Issue): 395-400 (2014) - 2013
- [j12]Finja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P. van Iersel, Sarah M. Keating, Matthias Rall, Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B. Kell, Wolfgang Müller, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, Nicolas Le Novère:
Path2Models: large-scale generation of computational models from biochemical pathway maps. BMC Syst. Biol. 7: 116 (2013) - 2012
- [j11]Dave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine Winder, Douglas B. Kell, Pedro Mendes, Neil Swainston:
Improving metabolic flux predictions using absolute gene expression data. BMC Syst. Biol. 6: 73 (2012) - 2011
- [j9]Neil Swainston, Kieran Smallbone, Pedro Mendes, Douglas B. Kell, Norman W. Paton:
The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks. J. Integr. Bioinform. 8(2) (2011) - 2010
- [j8]Peter Li, Joseph O. Dada, Daniel Jameson, Irena Spasic, Neil Swainston, Kathleen Carroll, Warwick B. Dunn, Farid Khan, Naglis Malys, Hanan L. Messiha, Evangelos Simeonidis, Dieter Weichart, Catherine Winder, Jill Wishart, David S. Broomhead, Carole A. Goble, Simon J. Gaskell, Douglas B. Kell, Hans V. Westerhoff, Pedro Mendes, Norman W. Paton:
Systematic integration of experimental data and models in systems biology. BMC Bioinform. 11: 582 (2010) - [j5]Paul D. Dobson, Kieran Smallbone, Daniel Jameson, Evangelos Simeonidis, Karin Lanthaler, Pinar Pir, Chuan Lu, Neil Swainston, Warwick B. Dunn, Paul Fisher, Duncan Hull, Marie Brown, Olusegun Oshota, Natalie J. Stanford, Douglas B. Kell, Ross D. King, Stephen G. Oliver, Robert D. Stevens, Pedro Mendes:
Further developments towards a genome-scale metabolic model of yeast. BMC Syst. Biol. 4: 145 (2010) - 2009
- [j3]Daniel Jameson, David A. Turner, John Ankers, Stephnie Kennedy, Sheila Ryan, Neil Swainston, Tony Griffiths, David G. Spiller, Stephen G. Oliver, Michael R. H. White, Douglas B. Kell, Norman W. Paton:
Information management for high content live cell imaging. BMC Bioinform. 10 (2009)
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