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@article{DBLP:journals/tcbb/AlonCPR10,
  author       = {Noga Alon and
                  Benny Chor and
                  Fabio Pardi and
                  Anat Rapoport},
  title        = {Approximate Maximum Parsimony and Ancestral Maximum Likelihood},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {183--187},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.13},
  doi          = {10.1109/TCBB.2008.13},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/AlonCPR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ApostolicoCP10,
  author       = {Alberto Apostolico and
                  Matteo Comin and
                  Laxmi Parida},
  title        = {{VARUN:} Discovering Extensible Motifs under Saturation Constraints},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {752--762},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.123},
  doi          = {10.1109/TCBB.2008.123},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ApostolicoCP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BergemannZ10,
  author       = {Tracy L. Bergemann and
                  Lue Ping Zhao},
  title        = {Signal Quality Measurements for cDNA Microarray Data},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {299--308},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.72},
  doi          = {10.1109/TCBB.2008.72},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BergemannZ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BlinDDHT10,
  author       = {Guillaume Blin and
                  Alain Denise and
                  Serge Dulucq and
                  Claire Herrbach and
                  H{\'{e}}l{\`{e}}ne Touzet},
  title        = {Alignments of {RNA} Structures},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {309--322},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.28},
  doi          = {10.1109/TCBB.2008.28},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BlinDDHT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BlinSV10,
  author       = {Guillaume Blin and
                  Florian Sikora and
                  St{\'{e}}phane Vialette},
  title        = {Querying Graphs in Protein-Protein Interactions Networks Using Feedback
                  Vertex Set},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {628--635},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.53},
  doi          = {10.1109/TCBB.2010.53},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BlinSV10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BogdanovS10,
  author       = {Petko Bogdanov and
                  Ambuj K. Singh},
  title        = {Molecular Function Prediction Using Neighborhood Features},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {208--217},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.81},
  doi          = {10.1109/TCBB.2009.81},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BogdanovS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BokhariJ10,
  author       = {Shahid H. Bokhari and
                  Daniel Janies},
  title        = {Reassortment Networks for Investigating the Evolution of Segmented
                  Viruses},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {288--298},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.73},
  doi          = {10.1109/TCBB.2008.73},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BokhariJ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BonetJ10,
  author       = {Maria Luisa Bonet and
                  Katherine St. John},
  title        = {On the Complexity of uSPR Distance},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {572--576},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.132},
  doi          = {10.1109/TCBB.2008.132},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BonetJ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BonizzoniVDPR10,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Romeo Rizzi},
  title        = {Pure Parsimony Xor Haplotyping},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {598--610},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.52},
  doi          = {10.1109/TCBB.2010.52},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BonizzoniVDPR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/CaoLLAZY10,
  author       = {Yonggang Cao and
                  Zuofeng Li and
                  Feifan Liu and
                  Shashank Agarwal and
                  Qing Zhang and
                  Hong Yu},
  title        = {An IR-Aided Machine Learning Framework for the BioCreative {II.5}
                  Challenge},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {454--461},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.56},
  doi          = {10.1109/TCBB.2010.56},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/CaoLLAZY10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChenLM10,
  author       = {Yifei Chen and
                  Feng Liu and
                  Bernard Manderick},
  title        = {BioLMiner System: Interaction Normalization Task and Interaction Pair
                  Task in the BioCreative {II.5} Challenge},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {428--441},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.47},
  doi          = {10.1109/TCBB.2010.47},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ChenLM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Cheng10,
  author       = {Qiang Cheng},
  title        = {A Sparse Learning Machine for High-Dimensional Data with Application
                  to Microarray Gene Analysis},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {636--646},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.8},
  doi          = {10.1109/TCBB.2009.8},
  timestamp    = {Fri, 13 Sep 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Cheng10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChowdhuryLR10,
  author       = {Rezaul Alam Chowdhury and
                  Hai{-}Son Le and
                  Vijaya Ramachandran},
  title        = {Cache-Oblivious Dynamic Programming for Bioinformatics},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {495--510},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.94},
  doi          = {10.1109/TCBB.2008.94},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ChowdhuryLR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DaiLT10,
  author       = {Hong{-}Jie Dai and
                  Po{-}Ting Lai and
                  Richard Tzong{-}Han Tsai},
  title        = {Multistage Gene Normalization and SVM-Based Ranking for Protein Interactor
                  Extraction in Full-Text Articles},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {412--420},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.45},
  doi          = {10.1109/TCBB.2010.45},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/DaiLT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DiazADGT10,
  author       = {Ester D{\'{\i}}az and
                  Guillermo Ayala and
                  Maria Diaz{-}Fernandez and
                  Liang Gong and
                  Derek Toomre},
  title        = {Automatic Detection of Large Dense-Core Vesicles in Secretory Cells
                  and Statistical Analysis of Their Intracellular Distribution},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {2--11},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.30},
  doi          = {10.1109/TCBB.2008.30},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/DiazADGT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DoneKDD10,
  author       = {Bogdan Done and
                  Purvesh Khatri and
                  Arina Done and
                  Sorin Draghici},
  title        = {Predicting Novel Human Gene Ontology Annotations Using Semantic Analysis},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {91--99},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.29},
  doi          = {10.1109/TCBB.2008.29},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/DoneKDD10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FreitasWA10,
  author       = {Alex Alves Freitas and
                  Daniela Wieser and
                  Rolf Apweiler},
  title        = {On the Importance of Comprehensible Classification Models for Protein
                  Function Prediction},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {172--182},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.47},
  doi          = {10.1109/TCBB.2008.47},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/FreitasWA10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GodinF10,
  author       = {Christophe Godin and
                  Pascal Ferraro},
  title        = {Quantifying the Degree of Self-Nestedness of Trees: Application to
                  the Structural Analysis of Plants},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {688--703},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.29},
  doi          = {10.1109/TCBB.2009.29},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/GodinF10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GuillemotB10,
  author       = {Sylvain Guillemot and
                  Vincent Berry},
  title        = {Fixed-Parameter Tractability of the Maximum Agreement Supertree Problem},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {342--353},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.93},
  doi          = {10.1109/TCBB.2008.93},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/GuillemotB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GuptaLG10,
  author       = {Gunjan Gupta and
                  Alexander Liu and
                  Joydeep Ghosh},
  title        = {Automated Hierarchical Density Shaving: {A} Robust Automated Clustering
                  and Visualization Framework for Large Biological Data Sets},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {223--237},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.32},
  doi          = {10.1109/TCBB.2008.32},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/GuptaLG10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HakenbergLVJSMTBG10,
  author       = {J{\"{o}}rg Hakenberg and
                  Robert Leaman and
                  Nguyen Ha Vo and
                  Siddhartha Jonnalagadda and
                  Ryan Sullivan and
                  Christopher Miller and
                  Luis Tari and
                  Chitta Baral and
                  Graciela Gonzalez},
  title        = {Efficient Extraction of Protein-Protein Interactions from Full-Text
                  Articles},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {481--494},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.51},
  doi          = {10.1109/TCBB.2010.51},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/HakenbergLVJSMTBG10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Han10,
  author       = {Xiaoxu Han},
  title        = {Nonnegative Principal Component Analysis for Cancer Molecular Pattern
                  Discovery},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {537--549},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.36},
  doi          = {10.1109/TCBB.2009.36},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Han10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HanCAYBP10,
  author       = {Ju Han and
                  Hang Chang and
                  Kumari L. Andarawewa and
                  Paul Yaswen and
                  Mary Helen Barcellos{-}Hoff and
                  Bahram Parvin},
  title        = {Multidimensional Profiling of Cell Surface Proteins and Nuclear Markers},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {80--90},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.134},
  doi          = {10.1109/TCBB.2008.134},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/HanCAYBP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HuangLG10,
  author       = {Liang{-}Tsung Huang and
                  Lien Fu Lai and
                  M. Michael Gromiha},
  title        = {Human-Readable Rule Generator for Integrating Amino Acid Sequence
                  Information and Stability of Mutant Proteins},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {681--687},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.128},
  doi          = {10.1109/TCBB.2008.128},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/HuangLG10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/JackupsL10,
  author       = {Ronald Jackups Jr. and
                  Jie Liang},
  title        = {Combinatorial Analysis for Sequence and Spatial Motif Discovery in
                  Short Sequence Fragments},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {524--536},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.101},
  doi          = {10.1109/TCBB.2008.101},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/JackupsL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Jiang10,
  author       = {Minghui Jiang},
  title        = {Approximation Algorithms for Predicting {RNA} Secondary Structures
                  with Arbitrary Pseudoknots},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {323--332},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.109},
  doi          = {10.1109/TCBB.2008.109},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Jiang10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KolchinskyAKHR10,
  author       = {Artemy Kolchinsky and
                  Alaa Abi{-}Haidar and
                  Jasleen Kaur and
                  Ahmed Abdeen Hamed and
                  Luis Mateus Rocha},
  title        = {Classification of Protein-Protein Interaction Full-Text Documents
                  Using Text and Citation Network Features},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {400--411},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.55},
  doi          = {10.1109/TCBB.2010.55},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/KolchinskyAKHR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KustraZ10,
  author       = {Rafal Kustra and
                  Adam Zagdanski},
  title        = {Data-Fusion in Clustering Microarray Data: Balancing Discovery and
                  Interpretability},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {50--63},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2007.70267},
  doi          = {10.1109/TCBB.2007.70267},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/KustraZ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LanS10,
  author       = {Man Lan and
                  Jian Su},
  title        = {Empirical Investigations into Full-Text Protein Interaction Article
                  Categorization Task {(ACT)} in the BioCreative {II.5} Challenge},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {421--427},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.49},
  doi          = {10.1109/TCBB.2010.49},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LanS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LangdonUCH10,
  author       = {William B. Langdon and
                  Graham J. G. Upton and
                  Renata da Silva Camargo and
                  Andrew P. Harrison},
  title        = {A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {647--653},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.108},
  doi          = {10.1109/TCBB.2008.108},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LangdonUCH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LeitnerMKCHV10,
  author       = {Florian Leitner and
                  Scott A. Mardis and
                  Martin Krallinger and
                  Gianni Cesareni and
                  Lynette Hirschman and
                  Alfonso Valencia},
  title        = {An Overview of BioCreative {II.5}},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {385--399},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.61},
  doi          = {10.1109/TCBB.2010.61},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LeitnerMKCHV10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LeungH10,
  author       = {Yukyee Leung and
                  Yeung Sam Hung},
  title        = {A Multiple-Filter-Multiple-Wrapper Approach to Gene Selection and
                  Microarray Data Classification},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {108--117},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.46},
  doi          = {10.1109/TCBB.2008.46},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LeungH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LiCLL10,
  author       = {Gang Li and
                  Tak{-}Ming Chan and
                  Kwong{-}Sak Leung and
                  Kin{-}Hong Lee},
  title        = {A Cluster Refinement Algorithm for Motif Discovery},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {654--668},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.25},
  doi          = {10.1109/TCBB.2009.25},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LiCLL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LiuLT10,
  author       = {Zhenqiu Liu and
                  Shili Lin and
                  Ming Tan},
  title        = {Sparse Support Vector Machines with L{\_}\{p\} Penalty for Biomarker
                  Identification},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {100--107},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.17},
  doi          = {10.1109/TCBB.2008.17},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LiuLT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LiuLW10,
  author       = {Xiaowen Liu and
                  Jinyan Li and
                  Lusheng Wang},
  title        = {Modeling Protein Interacting Groups by Quasi-Bicliques: Complexity,
                  Algorithm, and Application},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {354--364},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.61},
  doi          = {10.1109/TCBB.2008.61},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LiuLW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LonardiC10,
  author       = {Stefano Lonardi and
                  Jake Yue Chen},
  title        = {Data Mining in Bioinformatics: Selected Papers from {BIOKDD}},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {195--196},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.28},
  doi          = {10.1109/TCBB.2010.28},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LonardiC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LuGX10,
  author       = {Xin Lu and
                  Anthony Gamst and
                  Ronghui Xu},
  title        = {RDCurve: {A} Nonparametric Method to Evaluate the Stability of Ranking
                  Procedures},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {719--726},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.138},
  doi          = {10.1109/TCBB.2008.138},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LuGX10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LushboughBLJB10,
  author       = {Carol Lushbough and
                  Michael K. Bergman and
                  Carolyn J. Lawrence and
                  Douglas M. Jennewein and
                  Volker Brendel},
  title        = {BioExtract Server - An Integrated Workflow-Enabling System to Access
                  and Analyze Heterogeneous, Distributed Biomolecular Data},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {12--24},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.98},
  doi          = {10.1109/TCBB.2008.98},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/LushboughBLJB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MadeiraTSO10,
  author       = {Sara C. Madeira and
                  Miguel C. Teixeira and
                  Isabel S{\'{a}}{-}Correia and
                  Arlindo L. Oliveira},
  title        = {Identification of Regulatory Modules in Time Series Gene Expression
                  Data Using a Linear Time Biclustering Algorithm},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {153--165},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.34},
  doi          = {10.1109/TCBB.2008.34},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/MadeiraTSO10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Mahata10,
  author       = {Pritha Mahata},
  title        = {Exploratory Consensus of Hierarchical Clusterings for Melanoma and
                  Breast Cancer},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {138--152},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.33},
  doi          = {10.1109/TCBB.2008.33},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Mahata10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandouNPZ10,
  author       = {Ion I. Mandoiu and
                  Giri Narasimhan and
                  Yi Pan and
                  Yanqing Zhang},
  title        = {Guest Editors' Introduction to the Special Section on Bioinformatics
                  Research and Applications},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {577--578},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.114},
  doi          = {10.1109/TCBB.2010.114},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/MandouNPZ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MiklosMS10,
  author       = {Istv{\'{a}}n Mikl{\'{o}}s and
                  Bence M{\'{e}}lyk{\'{u}}ti and
                  Krister M. Swenson},
  title        = {The Metropolized Partial Importance Sampling {MCMC} Mixes Slowly on
                  Minimum Reversal Rearrangement Paths},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {763--767},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.26},
  doi          = {10.1109/TCBB.2009.26},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/MiklosMS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MosselR10,
  author       = {Elchanan Mossel and
                  S{\'{e}}bastien Roch},
  title        = {Incomplete Lineage Sorting: Consistent Phylogeny Estimation from Multiple
                  Loci},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {166--171},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.66},
  doi          = {10.1109/TCBB.2008.66},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/MosselR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MunozS10,
  author       = {Adriana Mu{\~{n}}oz and
                  David Sankoff},
  title        = {Rearrangement Phylogeny of Genomes in Contig Form},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {579--587},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.66},
  doi          = {10.1109/TCBB.2010.66},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/MunozS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Nakhleh10,
  author       = {Luay Nakhleh},
  title        = {A Metric on the Space of Reduced Phylogenetic Networks},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {218--222},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.2},
  doi          = {10.1109/TCBB.2009.2},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Nakhleh10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/PehkonenWT10,
  author       = {Petri Pehkonen and
                  Garry Wong and
                  Petri T{\"{o}}r{\"{o}}nen},
  title        = {Heuristic Bayesian Segmentation for Discovery of Coexpressed Genes
                  within Genomic Regions},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {37--49},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.56},
  doi          = {10.1109/TCBB.2008.56},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/PehkonenWT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/PelikanH10,
  author       = {Richard Pelikan and
                  Milos Hauskrecht},
  title        = {Efficient Peak-Labeling Algorithms for Whole-Sample Mass Spectrometry
                  Proteomics},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {126--137},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.31},
  doi          = {10.1109/TCBB.2008.31},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/PelikanH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/PerkinsH10,
  author       = {Theodore J. Perkins and
                  Michael T. Hallett},
  title        = {A Trade-Off between Sample Complexity and Computational Complexity
                  in Learning Boolean Networks from Time-Series Data},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {118--125},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.38},
  doi          = {10.1109/TCBB.2008.38},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/PerkinsH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/QiLLX10,
  author       = {Xingqin Qi and
                  Guojun Li and
                  Shuguang Li and
                  Ying Xu},
  title        = {Sorting Genomes by Reciprocal Translocations, Insertions, and Deletions},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {365--374},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.53},
  doi          = {10.1109/TCBB.2008.53},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/QiLLX10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RaifordKDR10,
  author       = {Douglas W. Raiford and
                  Dan E. Krane and
                  Travis E. Doom and
                  Michael L. Raymer},
  title        = {Automated Isolation of Translational Efficiency Bias That Resists
                  the Confounding Effect of GC(AT)-Content},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {238--250},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.65},
  doi          = {10.1109/TCBB.2008.65},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/RaifordKDR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RajasekaranSA10,
  author       = {Sanguthevar Rajasekaran and
                  Sahar Al Seesi and
                  Reda A. Ammar},
  title        = {Improved Algorithms for Parsing ESLTAGs: {A} Grammatical Model Suitable
                  for {RNA} Pseudoknots},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {619--627},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.54},
  doi          = {10.1109/TCBB.2010.54},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcbb/RajasekaranSA10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RandhawaST10,
  author       = {Ranjit Randhawa and
                  Clifford A. Shaffer and
                  John J. Tyson},
  title        = {Model Composition for Macromolecular Regulatory Networks},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {278--287},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.64},
  doi          = {10.1109/TCBB.2008.64},
  timestamp    = {Sat, 27 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/RandhawaST10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RinaldiSKCVR10,
  author       = {Fabio Rinaldi and
                  Gerold Schneider and
                  Kaarel Kaljurand and
                  Simon Clematide and
                  Th{\'{e}}r{\`{e}}se Vachon and
                  Martin Romacker},
  title        = {OntoGene in BioCreative {II.5}},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {472--480},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.50},
  doi          = {10.1109/TCBB.2010.50},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/RinaldiSKCVR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RubelWHBBFHKEKMHH10,
  author       = {Oliver R{\"{u}}bel and
                  Gunther H. Weber and
                  Min{-}Yu Huang and
                  E. Wes Bethel and
                  Mark D. Biggin and
                  Charless C. Fowlkes and
                  Cris L. Luengo Hendriks and
                  Soile V. E. Ker{\"{a}}nen and
                  Michael B. Eisen and
                  David W. Knowles and
                  Jitendra Malik and
                  Hans Hagen and
                  Bernd Hamann},
  title        = {Integrating Data Clustering and Visualization for the Analysis of
                  3D Gene Expression Data},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {64--79},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.49},
  doi          = {10.1109/TCBB.2008.49},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/RubelWHBBFHKEKMHH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/SaetreYMMKT10,
  author       = {Rune S{\ae}tre and
                  Kazuhiro Yoshida and
                  Makoto Miwa and
                  Takuya Matsuzaki and
                  Yoshinobu Kano and
                  Jun'ichi Tsujii},
  title        = {Extracting Protein Interactions from Text with the Unified AkaneRE
                  Event Extraction System},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {442--453},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.46},
  doi          = {10.1109/TCBB.2010.46},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/SaetreYMMKT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Sagot10,
  author       = {Marie{-}France Sagot},
  title        = {{EIC} Editorial},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {193--194},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.29},
  doi          = {10.1109/TCBB.2010.29},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Sagot10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Shibuya10,
  author       = {Tetsuo Shibuya},
  title        = {Fast Hinge Detection Algorithms for Flexible Protein Structures},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {333--341},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.62},
  doi          = {10.1109/TCBB.2008.62},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Shibuya10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/SmalterHJL10,
  author       = {Aaron M. Smalter and
                  Jun Huan and
                  Yi Jia and
                  Gerald H. Lushington},
  title        = {{GPD:} {A} Graph Pattern Diffusion Kernel for Accurate Graph Classification
                  with Applications in Cheminformatics},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {197--207},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2009.80},
  doi          = {10.1109/TCBB.2009.80},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/SmalterHJL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/SnirR10,
  author       = {Sagi Snir and
                  Satish Rao},
  title        = {Quartets MaxCut: {A} Divide and Conquer Quartets Algorithm},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {704--718},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.133},
  doi          = {10.1109/TCBB.2008.133},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/SnirR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TenenhausGGF10,
  author       = {Arthur Tenenhaus and
                  Vincent Guillemot and
                  Xavier Gidrol and
                  Vincent Frouin},
  title        = {Gene Association Networks from Microarray Data Using a Regularized
                  Estimation of Partial Correlation Based on {PLS} Regression},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {251--262},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.87},
  doi          = {10.1109/TCBB.2008.87},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/TenenhausGGF10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TinininiBGL10,
  author       = {Leonardo Tininini and
                  Paola Bertolazzi and
                  Alessandra Godi and
                  Giuseppe Lancia},
  title        = {CollHaps: {A} Heuristic Approach to Haplotype Inference by Parsimony},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {511--523},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.130},
  doi          = {10.1109/TCBB.2008.130},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/TinininiBGL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TsangW10,
  author       = {Herbert H. Tsang and
                  Kay C. Wiese},
  title        = {SARNA-Predict: Accuracy Improvement of {RNA} Secondary Structure Prediction
                  Using Permutation-Based Simulated Annealing},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {727--740},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.97},
  doi          = {10.1109/TCBB.2008.97},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/TsangW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/UngerC10,
  author       = {Giora Unger and
                  Benny Chor},
  title        = {Linear Separability of Gene Expression Data Sets},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {375--381},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.90},
  doi          = {10.1109/TCBB.2008.90},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/UngerC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/VenkatachalamAJG10,
  author       = {Balaji Venkatachalam and
                  Jim Apple and
                  Katherine St. John and
                  Dan Gusfield},
  title        = {Untangling Tanglegrams: Comparing Trees by Their Drawings},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {588--597},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.57},
  doi          = {10.1109/TCBB.2010.57},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/VenkatachalamAJG10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/VerspoorRJCBH10,
  author       = {Karin Verspoor and
                  Christophe Roeder and
                  Helen L. Johnson and
                  K. Bretonnel Cohen and
                  William A. Baumgartner Jr. and
                  Lawrence Hunter},
  title        = {Exploring Species-Based Strategies for Gene Normalization},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {462--471},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.48},
  doi          = {10.1109/TCBB.2010.48},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/VerspoorRJCBH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/Wu10,
  author       = {Yufeng Wu},
  title        = {Exact Computation of Coalescent Likelihood for Panmictic and Subdivided
                  Populations under the Infinite Sites Model},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {611--618},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.2},
  doi          = {10.1109/TCBB.2010.2},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/Wu10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YouBGB10,
  author       = {Liwen You and
                  Vladimir Brusic and
                  Marcus Gallagher and
                  Mikael Bod{\'{e}}n},
  title        = {Using Gaussian Process with Test Rejection to Detect T-Cell Epitopes
                  in Pathogen Genomes},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {741--751},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.131},
  doi          = {10.1109/TCBB.2008.131},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/YouBGB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZengZCY10,
  author       = {Jia Zeng and
                  Xiaoyu Zhao and
                  Xiao{-}Qin Cao and
                  Hong Yan},
  title        = {{SCS:} Signal, Context, and Structure Features for Genome-Wide Human
                  Promoter Recognition},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {550--562},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.95},
  doi          = {10.1109/TCBB.2008.95},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ZengZCY10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZhouSCWL10,
  author       = {Jianjun Zhou and
                  J{\"{o}}rg Sander and
                  Zhipeng Cai and
                  Lusheng Wang and
                  Guohui Lin},
  title        = {Finding the Nearest Neighbors in Biological Databases Using Less Distance
                  Computations},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {669--680},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.99},
  doi          = {10.1109/TCBB.2008.99},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ZhouSCWL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZhuOZ10,
  author       = {Zexuan Zhu and
                  Yew{-}Soon Ong and
                  Jacek M. Zurada},
  title        = {Identification of Full and Partial Class Relevant Genes},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {2},
  pages        = {263--277},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.105},
  doi          = {10.1109/TCBB.2008.105},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ZhuOZ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZhuWYLG10,
  author       = {Shenghuo Zhu and
                  Dingding Wang and
                  Kai Yu and
                  Tao Li and
                  Yihong Gong},
  title        = {Feature Selection for Gene Expression Using Model-Based Entropy},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {25--36},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.35},
  doi          = {10.1109/TCBB.2008.35},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ZhuWYLG10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZimekBFK10,
  author       = {Arthur Zimek and
                  Fabian Buchwald and
                  Eibe Frank and
                  Stefan Kramer},
  title        = {A Study of Hierarchical and Flat Classification of Proteins},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {3},
  pages        = {563--571},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2008.104},
  doi          = {10.1109/TCBB.2008.104},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/ZimekBFK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}