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ORCIDBIBM Workshops 2012: Philadelphia, PA, USA
- 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012, Philadelphia, USA, October 4-7, 2012. IEEE Computer Society 2012, ISBN 978-1-4673-2746-6
- Yongzhi Ong, Winfried Kurth:
A graph model and grammar for multi-scale modelling using XL. 1-8 - Zhen Liu, Yang Cao:
Approximation of a multi-scale model based on multiple site phosphorylation. 9-16 - Majid Masso
:
Knowledge-based scoring function derived from atomic tessellation of macromolecular structures for prediction of protein-ligand binding affinity. 17-21 - Masood Zamani, Stefan C. Kremer:
Protein secondary structure prediction using support vector machines and a codon encoding scheme. 22-27 - Weiwei Han, Lei Xie:
Structural basis of polypharmacological effects of metformin. 28-31 - Thomas Evangelidis, Philip E. Bourne, Li Xie, Lei Xie:
An integrated workflow for proteome-wide off-target identification and polypharmacology drug design. 32-39 - Ibrahim Al-Bluwi, Marc Vaisset, Thierry Siméon, Juan Cortés:
Coarse-grained elastic networks, normal mode analysis and robotics-inspired methods for modeling protein conformational transitions. 40-47 - Ankur Dhanik, John S. McMurray, Lydia E. Kavraki:
Auto dock-based incremental docking protocol to improve docking of large ligands. 48-55 - Kevin Molloy, Amarda Shehu:
A robotics-inspired method to sample conformational paths connecting known functionally-relevant structures in protein systems. 56-63 - Sameh N. Saleh, Brian S. Olson, Amarda Shehu:
A population-based evolutionary algorithm for sampling minima in the protein energy surface. 64-71 - Jim Havrilla, Ahmet Sacan:
Meta-analysis of protein structural alignment. 72-76 - Lauro Cesar Galvão, Luiz Fernando Nunes, Heitor Silvério Lopes, Pablo Moscato:
A new greedy heuristic for 3DHP protein struture prediction with side chain. 77-81 - Bahar Akbal-Delibas, Filip Jagodzinski, Nurit Haspel:
Towards a hybrid method for detecting critical protein residues. 82-85 - Boyu Zhang, Daniel T. Yehdego, Kyle L. Johnson, Ming-Ying Leung, Michela Taufer:
A modularized MapReduce framework to support RNA secondary structure prediction and analysis workflows. 86-93 - Andrew McKnight, Kamal Al-Nasr, Dong Si, Andrey N. Chernikov, Nikos Chrisochoides, Jing He:
CryoEM skeleton length estimation using a decimated curve. 109-113 - Wenqi You, Alena Simalatsar, Nicolas Widmer, Giovanni De Micheli:
A Drug Administration Decision Support System. 122-129 - Ben-gong Zhang, Gouhei Tanaka, Luonan Chen, Kazuyuki Aihara:
Dynamical modeling of chronic myeloid leukemia progression and the development of mutations. 130-135 - J. B. Brown, Satoshi Niijima, Akira Shiraishi, Masahiko Nakatsui, Yasushi Okuno:
Chemogenomic approach to comprehensive predictions of ligand-target interactions: A comparative study. 136-142 - Omid Ghasemi, Nguyen T. Nguyen, Trevi A. Ramirez, Jianhua Zhang, Merry Lindsey, Yufang Jin:
A biclustering approach to analyze drug effects on extracellular matrix remodeling post-myocardial infarction. 143-150 - Quoc-Nam Tran, Valentin Andreev, Ariel Fernández:
Likelihood of side effects depends on desired clinical impact: Affinities within a very small set of targets enables inference of promiscuity or specificity of kinase inhibitors. 151-158 - Hailong Zhu, R. Shyama Prasad Rao, Luonan Chen:
Reconstructing dynamic gene regulatory network for the development process of hepatocellular carcinoma. 159-165 - Zhijie Lin, Yan Chen, Shiwei Wu, Yun Xiong, Yangyong Zhu, Guangyong Zheng:
Mining hub-based protein complexes in massive biological networks. 166-173 - Marco Mina, Pietro Hiram Guzzi:
AlignMCL: Comparative analysis of protein interaction networks through Markov clustering. 174-181 - Ioannis Gkigkitzis:
Predator prey modeling at the molecular level: Analytical considerations about the coupling of biochemical events during photo-chemo therapy and cell survival probability. 182-187 - Irina A. Roznovat, Heather J. Ruskin:
A computational model for genetic and epigenetic signals in colon cancer. 188-195 - Huaxiong Yao, Yan Yang, Xiaolong Li:
Relevance judgment algorithm for detecting protein complexes from protein interaction networks. 196-202 - Saeed Salem, Rami Alroobi, Syed Ahmed, Mohammad Hossain:
Discovering maximal cohesive subgraphs and patterns from attributed biological networks. 203-210 - Francisco I. Pena, Young-Rae Cho:
Improvements of graph entropy approach to detect protein complexes by ontological analysis of PPIs. 211-217 - Trevor Cohen, Dominic Widdows, Roger W. Schvaneveldt, Thomas C. Rindflesch:
Discovery at a distance: Farther journeys in predication space. 218-225 - Lubomir Stanchev:
Building semantic corpus from wordNet. 226-231 - J. Caleb Goodwin, Trevor Cohen, Thomas C. Rindflesch:
Discovery by scent: Discovery browsing system based on the Information Foraging Theory. 232-239 - Delroy Cameron, Varun Bhagwan, Amit P. Sheth:
Towards comprehensive longitudinal healthcare data capture. 240-247 - Sanmitra Bhattacharya, Padmini Srinivasan:
A semantic approach to involve Twitter in LBD efforts. 248-253 - Chen Geng, Jian Yang, Tong Li, Yongtian Wang:
A novel non-contact interactive medical image viewing system. 254-259 - Saurabh Shirgaonkar, Dong Hyun Jeong, Toan Huynh, Soo-Yeon Ji:
Designing a robust bleeding detection method for brain CT image analysis. 260-264 - Murat Seckin Ayhan, Ryan G. Benton, Vijay V. Raghavan, Suresh K. Choubey:
Utilization of domain-knowledge for simplicity and comprehensibility in predictive modeling of Alzheimer's disease. 265-272 - Tayo Obafemi-Ajayi, Ratchadaporn Kanawong, Dong Xu, Shao Li, Ye Duan:
Features for automated tongue image shape classification. 273-279 - Mohammad Majid al-Rifaie, Ahmed Aber, Ahmed Majid Oudah:
Utilising Stochastic Diffusion Search to identify metastasis in bone scans and microcalcifications on mammographs. 280-287 - Ratchadaporn Kanawong, Tayo Obafemi-Ajayi, Jun Yu, Dong Xu, Shao Li, Ye Duan:
ZHENG classification in Traditional Chinese Medicine based on modified specular-free tongue images. 288-294 - Nanyue Wang, Dawei Huang, Yanping Chen, Youhua Yu, Zengyu Shan, Liyuan Xue, Bohua Jiang, Tongda Li, Yan Chen, Ying Huang:
Signals analysis of pulse-diagnosis in TCM by the combination of unsupervised learning and supervised learning. 295-298 - Xue-Qiang Zeng, Guo-Zheng Li:
A supervised solution for redundant feature detection depending on instances. 299-306 - Yuanfang Chen, Yu Chen, Tao Yu, Zhaohui Liang, Song Wei:
Theory and practice: A discourse-based translation strategy of Chinese Medicine. 307-309 - Xiaoyu Chen, Na Chu, Lizhuang Ma, Yiyang Hu:
Syndrome discrimination model of traditional Chinese medicine for chronic hepatitis B. 310-315 - Yuntao Liu, Qing Liu, Dan-Wen Zheng, Qing-Ping Deng, Zhan-Peng Tan, Xiaoyang Jin, Wei Huang, Yaling Lei, Yi Luo, Jian Yin:
Application and improvement discussion about Apriori algorithm of association rules mining in cases mining of influenza treated by contemporary famous old Chinese medicine. 316-322 - Ziping Li, Zicai Chen, Lingfeng Zeng, Zhaohui Liang, Quanxin Chen:
Chen's flying needle treatment for Bell's facial paralysis of wind-cold pattern: A study protocol for a distinguished veteran doctor of TCM. 323-327 - Ziping Li, Fushan Qiu, Lingfeng Zeng, Zhaohui Liang, Yanyan Huang:
Distal point acupuncture for cervical spondylosis with radiculopathy based on flow of meridians: A research protocol for clinical trial. 328-331 - Yun Yang:
Data mining on prescription, herbal pairs, and pattern identification of pulmonary tuberculosis cases. 332-335 - Nipeng Lin, Changeai Xie, Xiaohong Xu, Wenbin Fu:
The mechanism of acupuncture for obsessive-complusive disorder on TCM heart-gallbladder concept. 336-339 - Xing Liu, Shengye Chen:
30 Cases of clinical efficacy observation on degenerative cervical spondylosis treated with needle-knife therapy. 340-342 - Lizhi Chen, Feng Yuan, Xiao-Yan Zhao, Mei-ai Liang, Wenbin Fu:
Mechanism of needle-knife therapy in treating degenerative cervical spondylosis. 343-345 - Feng Yuan, Lizhi Chen, Xiaohong Xu, Qian Wang, Wenbin Fu:
Acupuncture for neck type cervical spondylosis on Heart-Gallbladder theory. 346-348 - Xiuqin Wang, Ningxia Liang, Fumin Zhang, Tianping Li, Chai Yi, Jun Zhao:
Characteristic of TCM and the impact on ethics review of clinical research involving Chinese Medicine. 349-351 - Xiaoyong Lin, Jian Li, Jianke Pan, Jun Liu, Da Guo:
Effect of "Shenque" Qi distribution theory on malignant Bone cancer patients' quality of life(QOL) during chemotherapy. 352-354 - Binshan Zhang, Jian Li, Xuewei Cao, Jianke Pan, Da Guo:
Study on the law of ancient herbs in the treatment of osteoarthritis. 355-357 - Zhichao Tan, Da Guo, Lufeng Huang, Xuewei Cao, Jun Liu:
Treating Non-infectious Fever after Orthopedic Surgery by nourishing yin: An inspiration from systematized identification of warm diseases. 358-361 - Kun Bao, Han-guo Peng, Pei-ling Su:
Discussion on the improvement of the arteriovenous fistula surgeon's micrological technique. 362-364 - Shuo Jiang, Ping Zhong, Qiuping Huang, Qian Wang, Dejian Lu, Bin Huang, Wenbin Fu:
Randomized controlled trials of abdominal acupuncture (1992-2012): An assessment of reporting quality with a CONSORT- and STRICTA-based instrument. 365-370 - Zhiqi Fan, Qian Wu, Fuming Li, Yu Chen, Nipeng Lin, Wenbin Fu:
The making and evaluating of animal models of obsessive-compulsive disorder. 371-374 - Qian Wu, Fuming Li, Wenbin Fu:
Clinical research progress of treatment over Tourette syndrome with acup-mox therapy. 375-378 - Xiaohong Xu, Zhe Li, Xiaoling Xu, Wenbin Fu:
Clinical practice and research situation of Acupuncture in China: An overview report of 2012 Pearl River Forum. 379-382 - Qinghui Bao, Hui Liao, Li Fan, Hui Xiao, Jialin Zhu:
Effects of emotional nursing care cooperated with acupuncture points massage for post-stroke patients with insomnia. 383-385 - You Luo, Li Fan, Guibao Huang, Murong Liang, Jialin Zhu:
Effect of acupuncture on the blood glucose and insulin in the obese rats. 386-388 - Tao Yu, Kun Bao, Changeai Xie, Jian Sun, Li Jiang, Wenbin Fu:
Clinical observation of the heart-gallbladder acupuncture treatment in the blood stasis type lumbar muscle strain. 389-391 - Guang Yang, Jianfeng Zhuo, Jiang Li, Jun Zhang, Minzhou Zhang:
Clinic effect of tongguan capsule for coronary heart disease : A meta-analysis. 392-395 - Zhaohui Liang, Gang Zhang, Ziping Li, Jian Yin, Wenbin Fu:
Deep learning for acupuncture point selection patterns based on veteran doctor experience of Chinese medicine. 396-401 - Jian Li, Da Guo, Liu Jinwen, Jianke Pan, Lufeng Huang, Jun Liu:
Prof. Liu Jinwen's experience on treating knee osteoarthritis. 402-405 - Da Guo, Jian Li, Gang Zhang, Weixiang Lu, Shaojian Xu, Jun Liu:
Research on optimal Traditional Chinese Medicine treatment of knee ostarthritis with data mining algorithms. 406-409 - Qiang Tian, Kiulam Chung, Rusong Guo, Zhenbao Li, Shan Wu:
The immediate effects of Chinese bone-setting in patients with acute ankle sprain. 410-412 - Qingsheng Yang, Zhilin Gu, Zhenhua Xu, Quanxin Chen:
Clinical research on rule of acupoint heat-sensitization within patients suffer Bell's palsy. 413-417 - Hao Chen, Josiah Poon, Simon K. Poon, Kelvin Chan, Ka-Ho Wong, Daniel Man-yuen Sze:
Evaluation of herbal Chromatographie fingerprint identification systems. 418-423 - Zhenhua Xu, Zhilin Gu, Qingsheng Yang, Quanxin Chen:
A clinical research about "Moxibustion can be used for heat syndrome" in Bell's palsy. 424-427 - Yan Li, Biyun Xu, Peng Liu, Aihua Ou, Yan Xu, Biyang Ou, Ruiyu Xu, Zhaozhang Wei, Liang Zeng, Runru Mai, Jianbin Chen, Wen Zhou, Huimei Zeng, Jiale Zeng:
A randomized controlled study of emotion and quality of life on mild to moderate insomnia intervened by Chinese Medicine in integrated program. 428-434 - Benjie Qi, Qingfeng Luo, Mingzhi Wan:
Clinical curative effect of needle scalpel for traumatic ankylosis. 435-436 - Xiaohong Xu, Shudong Chen, Xiaoling Xu:
A novel acupuncture for killing lumbago: Immediate effects of balancing acupuncture for acute lumbar disc herniation. 437-440 - Ziping Li, Yun Zhang, Lingfeng Zeng, Zhaohui Liang, Liwei Yin, Wenbin Fu:
Moxibustion at Da-zhui acupoint for sensorineural tinnitus with the pattern about deficiency of qi-and-blood: A study protocol for clinical trial. 441-443 - Ziping Li, Lingfeng Zeng, Zhaohui Liang, Yongchao Zhang, Quanxin Chen, Wenbin Fu:
The development of Chen's flying needle based on the traditional Chinese Medicine: A needle-inserting technique created by a distinguished veteran doctor of TCM. 444-447 - Yefeng Cai, Yue Zhang, Zhao-hui Liang:
Application of data mining to Zheng studies of Chinese medicine based on CER. 448-451 - Wei Mao, Peng Xu, Chuang Li, Fengzhen Ye:
Analysis on the medication rule from the contemporary famous experts of TCM in treatment of chronic renal failure. 452-454 - Peng Chen, Bin Fang, Wei He, Yong Li, Zhen-Qiu Chen, Haibin Wang:
The effect of serum containing Tao Hong Si Wu decoction on macrophages in steroid-induced osteonecrosis of femoral head. 455-458 - Li Fan, You Luo, Dejian Lu, Minmin Wang, Hong Zhang, Weixiang Xie, Yujie Li:
Clinical effect study on treatment of post cerebral infarction depression by Eight Methods of Intelligent Turtle. 459-462 - Changeai Xie, Nipeng Lin, Jiaxin Zhou, Zhiqi Fan, Wenbin Fu:
The experimental introduction of professor Fu's three-step therapy on gouty arthritis. 463-465 - Lixing Cao, Yanxin Chen, Xiaodan Li, Qiuxia Chen:
The development for endometriosis with the pattern of kidney-deficiency and blood-stasis based on animal model: A trial combining disease and syndrome. 466-471 - Qingqing Zhou, Lixing Cao, Danting Wen, Zhiqiang Chen:
The assessment on influencing factors for postoperative recovery of gastrointestinal function based on the gynecological abdominal surgery. 472-476 - Wei Song, Weifeng Sun, Zhihuang Chen, Liu Jian:
The mechanical discussion of effect of muscle meridian on the treatment of arthralgia syndrome. 477-479 - Xia Wu, Hui-Jin Wang, Guo-ming Chen, Wei-Heng Zhu, Shun Long:
Mining the associations between pharmic quality and ingredients of traditional Chinese medicines. 480-485 - Ling Fan, Yao Xiao, Wenbin Fu, Ziping Li, Zhaohui Liang, Qing He:
The analysis of surface electromyographic signal characteristics of human arm muscle function state based on the theory of Chinese medicine. 486-490 - Shun Long, Guo-ming Chen, Wei-Heng Zhu, Wen-Juan Shi:
An empirical study on knee arthritis remedies. 491-495 - Stefan Jaeger:
An information-theoretic neural model based on concepts in Chinese medicine. 496-502 - Dejian Lu, Fuming Li, Wenbin Fu:
Professor Wenbin Fu's experience in treating Tourette syndrome on the theory of regulating Spirit. 503-506 - Lei Zhang, Wei Mao, Yin Li, Guobin Su, Xusheng Liu:
Gifts from Chinese Medicine for diabetic nephropathy: Ancient formulas in modern times. 507-510 - Yu Kui, Jian-Qiao Fang, Li Fang, Ping-Wen Li:
Abdominal acupuncture for Bi syndrome of casino workers in Macau: A randomized controlled trial. 511-513 - Chongli Deng, Jian Li, Xuewei Cao, Jun Liu, Tao Yu, Da Guo:
Therapeutic effectiveness evaluation on Shishi manipulation for knee osteoarthritis. 520-522 - Carl J. Schmidt, Liang Sun, Cecilia N. Arighi, Keith Decker, K. Vijay-Shanker, Manabu Torii, Catalina O. Tudor, Cathy H. Wu, Peter D'Eustachio:
Pathway curation: Application of text-mining tools eGIFT and RLIMS-P. 523-528 - Simon Gordonov, Avi Ma'ayan:
Connecting clusters of patient to drug responses of cell lines to suggest personalized therapeutics for breast cancer. 529-534 - Keith Decker, Preeti Anday, Liang Sun, Carl J. Schmidt:
Using expression data to help pathway curation. 535-539 - Hui Li, Chunmei Liu, Legand Burge, William M. Southerland:
Spatial index and visualization of protein structure. 540-543 - Hui Li, Chunmei Liu, Legand Burge, Kyung Dae Ko, William M. Southerland:
Predicting protein-protein interactions using full Bayesian network. 544-550 - Liliana Marcela Olarte Mesa, Luis Fernando Niño Vasquez, Liliana López Kleine:
Identification and analysis of gene clusters in biological data. 551-557 - Jasjit K. Banwait, Hesham H. Ali, Dhundy Bastola:
Enriching miRNA binding site specificity with sequence profile based filtering of 3'-UTR region of mRNA. 558-563 - Ravi V. Atreya, Jingchun Sun, Zhongming Zhao:
A network and functional investigation of illicit drugs and their targets. 564-569 - Dragana Miljkovic, Matjaz Depolli, Igor Mozetic, Nada Lavrac, Tjasa Stare, Marko Petek, Kristina Gruden:
Constraint-driven optimization of plant defense model parameters. 570-574 - Andrea Szabóová, Ondrej Kuzelka, Filip Zelezný:
Prediction of antimicrobial activity of peptides using relational machine learning. 575-580 - Gang Chen, Jianxin Wang:
Identifying functional modules in tissue specific protein interaction network. 581-586 - Murtada Khalafallah Elbashir, Jianxin Wang, Fang-Xiang Wu:
A hybrid approach of support vector machines with logistic regression for β-turn prediction. 587-593 - Jian Wang, Qian Xu, Hongfei Lin, Zhihao Yang, Yanpeng Li:
Combining labeled and unlabeled data for biomédical event extraction. 594-601 - Xijun Liang, Zhonghang Xia, Xinnan Niu, Andrew J. Link, Liping Pang, Fang-Xiang Wu, Hongwei Zhang:
A fuzzy cluster-based algorithm for peptide identification. 602-609 - Mohammad R. Nezami Ranjbar, Yi Zhao, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Evaluation of normalization methods for analysis of LC-MS data. 610-617 - Fahad Saeed, Trairak Pisitkun, Jason D. Hoffert, Guanghui Wang, Marjan Gucek, Mark A. Knepper:
An efficient dynamic programming algorithm for phosphorylation site assignment of large-scale mass spectrometry data. 618-625 - Yanhua Wang, Zhihao Yang, Hongfei Lin, Yanpeng Li:
A syntactic rule-based method for automatic pathway information extraction from biomédical literature. 626-633 - Wei Xiong, Hui Liu, Jihong Guan, Shuigeng Zhou:
Effectively predicting protein functions by collective classification - An extended abstract. 634-639 - Bo Xu, Hongfei Lin, Zhihao Yang, Kavishwar B. Wagholikar, Hongfang Liu:
Classifying protein complexes from candidate subgraphs using fuzzy machine learning model. 640-647 - Soyoung Ryu, David R. Goodlett, William S. Noble, Vladimir N. Minin:
A statistical approach to peptide identification from clustered tandem mass spectrometry data. 648-653 - Bahar Akbal-Delibas, Nurit Haspel:
Refining multimeric protein complexes using conservation, electrostatics and probabilistic selection. 648-653 - Renato de Paula, Maristela Holanda, Maria Emília M. T. Walter, Sérgio Lifschitz:
Managing data provenance in genome project workflows. 654-661 - Anurag Nagar, Michael Hahsler:
A novel quasi-alignment-based method for discovering conserved regions in genetic sequences. 662-669