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ORCIDBriefings in Bioinformatics, Volume 8
Volume 8, Number 1, January 2007
- Martin J. Bishop
:
Editorial. 1
- Tina A. Eyre, Mathew W. Wright, Michael J. Lush, Elspeth A. Bruford:
HCOP: a searchable database of human orthology predictions. 2-5 - Shivashankar H. Nagaraj, Robin B. Gasser, Shoba Ranganathan:
A hitchhiker's guide to expressed sequence tag (EST) analysis. 6-21 - Jason C. Hsu, Jane Chang, Tao Wang, Eiríkur Steingrímsson, Magnús Karl Magnússon, Kristin Bergsteinsdottir:
Statistically designing microarrays and microarray experiments to enhance sensitivity and specificity. 22-31 - Anne-Laure Boulesteix, Korbinian Strimmer:
Partial least squares: a versatile tool for the analysis of high-dimensional genomic data. 32-44 - Emanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew C. R. Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck:
Agents in bioinformatics, computational and systems biology. 45-59
- I. King Jordan:
Abstracts. 60-64
Volume 8, Number 2, March 2007
- Vladimir Brusic:
The growth of bioinformatics. 69-70
- David L. Gold, Kevin R. Coombes, Jing Wang, Bani K. Mallick:
Enrichment analysis in high-throughput genomics - accounting for dependency in the NULL. 71-77 - Piero Fariselli, Ivan Rossi, Emidio Capriotti, Rita Casadio:
The WWWH of remote homolog detection: The state of the art. 78-87 - Carolina Perez-Iratxeta, Miguel A. Andrade-Navarro, Jonathan D. Wren:
Evolving research trends in bioinformatics. 88-95 - Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan:
Methods and protocols for prediction of immunogenic epitopes. 96-108 - Darren J. Wilkinson:
Bayesian methods in bioinformatics and computational systems biology. 109-116 - Lucia Bianchi, Pietro Liò:
Forensic DNA and bioinformatics. 117-128
- I. King Jordan:
Abstracts. 129-133
Volume 8, Number 3, May 2007
- Eric Neumann, Larry Prusak:
Knowledge networks in the age of the Semantic Web. 141-149 - Chiquito J. Crasto, Luis N. Marenco, Nian Liu, Thomas M. Morse, Kei-Hoi Cheung, Peter C. Lai, Gautam Bahl, Peter Masiar, Hugo Y. K. Lam, Ernest Lim, Huajun Chen, Prakash M. Nadkarni, Michele Migliore, Perry L. Miller, Gordon M. Shepherd:
SenseLab: new developments in disseminating neuroscience information. 150-162 - Tim Clark, June Kinoshita:
Alzforum and SWAN: the present and future of scientific web communities. 163-171 - Dennis Quan:
Improving life sciences information retrieval using semantic web technology. 172-182 - Robert Stevens, Jun Zhao, Carole A. Goble:
Using provenance to manage knowledge of In Silico experiments. 183-194 - Lee Feigenbaum, Sean Martin, Matthew N. Roy, Benjamin Szekely, Wing C. Yung:
Boca: an open-source RDF store for building Semantic Web applications. 195-200
- Suzanne S. Sindi:
Handbook of Computational Molecular Biology: Edited by Srinivas Aluru. 201-203 - Russell Schwartz:
Stochastic Modelling for Systems Biology: Darren J. Wilkinson. 204-205
- Tim Clark:
Knowledge Integration in Biomedicine: Technology and Community.
Volume 8, Number 4, July 2007
- Martin J. Bishop, Claire Bird:
BIB's first impact factor is 24.37. 207 - Charlie Hodgman:
Integrative biology - the way forward. 208-209
- Claudine Chaouiya:
Petri net modelling of biological networks. 210-219 - Denis Thieffry:
Dynamical roles of biological regulatory circuits. 220-225 - Eric Mjolsness:
Towards a calculus of biomolecular complexes at equilibrium. 226-233 - Kevin Burrage, John Hancock, André Leier, Dan V. Nicolau Jr.:
Modelling and simulation techniques for membrane biology. 234-244 - Bryan C. Thorne, Alexander M. Bailey, Shayn M. Peirce:
Combining experiments with multi-cell agent-based modeling to study biological tissue patterning. 245-257 - Christopher C. Poirier, Pablo A. Iglesias:
An integrative approach to understanding mechanosensation. 258-265 - Nikolay A. Kolchanov, Tatyana I. Merkulova, Elena V. Ignatieva, Elena A. Ananko, Dmitry Yu. Oshchepkov, Victor G. Levitsky, Gennady V. Vasiliev, Nataly V. Klimova, Vasily M. Merkulov, T. Charles Hodgman:
Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes. 266-274
- Hiram A. Firpi:
Handbook of Bioinspired Algorithms and Applications: Edited by Stephan Olariu and Albert Y. 275-276
Volume 8, Number 5, September 2007
- Russ B. Altman:
Current progress in bioinformatics 2007. 277-278
- David S. Wishart:
Current Progress in computational metabolomics. 279-293 - Alain Laederach:
Informatics challenges in structured RNA. 294-303 - Bobbie-Jo M. Webb-Robertson, William R. Cannon:
Current trends in computational inference from mass spectrometry-based proteomics. 304-317 - Balaji S. Srinivasan, Nigam H. Shah, Jason Flannick, Eduardo Abeliuk, Antal F. Novak, Serafim Batzoglou:
Current progress in network research: toward reference networks for key model organisms. 318-332 - Maricel G. Kann:
Protein interactions and disease: computational approaches to uncover the etiology of diseases. 333-346 - Indra Neil Sarkar:
Biodiversity informatics: organizing and linking information across the spectrum of life. 347-357 - Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin Bretonnel Cohen:
Frontiers of biomedical text mining: current progress. 358-375
- Ping Ma:
Bayesian Inference for Gene Expression and Proteomics. 376-377 - Samy Meroueh:
Normal Mode Analysis Theoretical and Applications to Biological and Chemical Systems. 378-379
- Tim Clark:
Knowledge Integration in Biomedicine: Technology and Community. 380
Volume 8, Number 6, November 2007
- M. J. Bishop:
Editorial. 381 - Casey M. Bergman, Hadi Quesneville:
Discovering and detecting transposable elements in genome sequences. 382-392 - Giovanni Montana, Clive J. Hoggart:
Statistical software for gene mapping by admixture linkage disequilibrium. 393-395 - Irmtraud M. Meyer:
A practical guide to the art of RNA gene prediction. 396-414 - W. Gregory Alvord, Jean A. Roayaei, Octavio A. Quiñones, Katherine T. Schneider:
A microarray analysis for differential gene expression in the soybean genome using Bioconductor and R. 415-431 - Xiong Liu, Hassan A. Karimi:
High-throughput modeling and analysis of protein structural dynamics. 432-445 - Leon French, Paul Pavlidis:
Informatics in neuroscience. 446-456 - Sonia Cattley, Jonathan W. Arthur:
BioManager: the use of a bioinformatics web application as a teaching tool in undergraduate bioinformatics training. 457-465
- Yunlong Liu:
Computational Genome Analysis: an Introduction: Richard C. Deonier, Simon Tavaré and Michael S. Waterman. 466 - Giselle M. Knudsen:
Proteomics for Biological Discovery.: Edited by Timothy D. Veenstra and John R. Yates III. 467-468
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