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ORCIDBibTeX records: Uri Alon 0001
@article{DBLP:journals/ploscb/MizrachiTKMHMA23,
author = {Ben Ron Mizrachi and
Avichai Tendler and
Omer Karin and
Tomer Milo and
Dafna Haran and
Avi E. Mayo and
Uri Alon},
title = {Major depressive disorder and bistability in an {HPA-CNS} toggle switch},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {12},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1011645},
doi = {10.1371/JOURNAL.PCBI.1011645},
timestamp = {Mon, 25 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/MizrachiTKMHMA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KarinA22,
author = {Omer Karin and
Uri Alon},
title = {The dopamine circuit as a reward-taxis navigation system},
journal = {PLoS Comput. Biol.},
volume = {18},
number = {7},
year = {2022},
url = {https://doi.org/10.1371/journal.pcbi.1010340},
doi = {10.1371/JOURNAL.PCBI.1010340},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/KarinA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KatzirCAA19,
author = {Itay Katzir and
Murat Cokol and
Bree B. Aldridge and
Uri Alon},
title = {Prediction of ultra-high-order antibiotic combinations based on pairwise
interactions},
journal = {PLoS Comput. Biol.},
volume = {15},
number = {1},
year = {2019},
url = {https://doi.org/10.1371/journal.pcbi.1006774},
doi = {10.1371/JOURNAL.PCBI.1006774},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/KatzirCAA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/TendlerZMA19,
author = {Avichai Tendler and
Anat Zimmer and
Avi E. Mayo and
Uri Alon},
title = {Noise-precision tradeoff in predicting combinations of mutations and
drugs},
journal = {PLoS Comput. Biol.},
volume = {15},
number = {5},
year = {2019},
url = {https://doi.org/10.1371/journal.pcbi.1006956},
doi = {10.1371/JOURNAL.PCBI.1006956},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/TendlerZMA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ZimmerADA17,
author = {Anat Zimmer and
Shlomit Amar{-}Farkash and
Tamar Danon and
Uri Alon},
title = {Dynamic proteomics reveals bimodal protein dynamics of cancer cells
in response to {HSP90} inhibitor},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {1},
pages = {33:1--33:11},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0410-8},
doi = {10.1186/S12918-017-0410-8},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ZimmerADA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TendlerMA15,
author = {Avichai Tendler and
Avraham E. Mayo and
Uri Alon},
title = {Evolutionary tradeoffs, Pareto optimality and the morphology of ammonite
shells},
journal = {{BMC} Syst. Biol.},
volume = {9},
pages = {12},
year = {2015},
url = {https://doi.org/10.1186/s12918-015-0149-z},
doi = {10.1186/S12918-015-0149-Z},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/TendlerMA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/FriedlanderMTA15,
author = {Tamar Friedlander and
Avraham E. Mayo and
Tsvi Tlusty and
Uri Alon},
title = {Evolution of Bow-Tie Architectures in Biology},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {3},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004055},
doi = {10.1371/JOURNAL.PCBI.1004055},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/FriedlanderMTA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KoremSHSHMRKA15,
author = {Yael Korem and
Pablo Szekely and
Yuval Hart and
Hila Sheftel and
Jean Hausser and
Avi E. Mayo and
Michael E. Rothenberg and
Tomer Kalisky and
Uri Alon},
title = {Geometry of the Gene Expression Space of Individual Cells},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {7},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004224},
doi = {10.1371/JOURNAL.PCBI.1004224},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/KoremSHSHMRKA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SzekelyKMMA15,
author = {Pablo Szekely and
Yael Korem and
Uri Moran and
Avi E. Mayo and
Uri Alon},
title = {The Mass-Longevity Triangle: Pareto Optimality and the Geometry of
Life-History Trait Space},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {10},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004524},
doi = {10.1371/JOURNAL.PCBI.1004524},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/SzekelyKMMA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/AidelbergTRDBA14,
author = {Guy Aidelberg and
Benjamin D. Towbin and
Daphna Rothschild and
Erez Dekel and
Anat Bren and
Uri Alon},
title = {Hierarchy of non-glucose sugars in Escherichia coli},
journal = {{BMC} Syst. Biol.},
volume = {8},
pages = {133},
year = {2014},
url = {https://doi.org/10.1186/s12918-014-0133-z},
doi = {10.1186/S12918-014-0133-Z},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/AidelbergTRDBA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/RothschildDHBASA14,
author = {Daphna Rothschild and
Erez Dekel and
Jean Hausser and
Anat Bren and
Guy Aidelberg and
Pablo Szekely and
Uri Alon},
title = {Linear Superposition and Prediction of Bacterial Promoter Activity
Dynamics in Complex Conditions},
journal = {PLoS Comput. Biol.},
volume = {10},
number = {5},
year = {2014},
url = {https://doi.org/10.1371/journal.pcbi.1003602},
doi = {10.1371/JOURNAL.PCBI.1003602},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/RothschildDHBASA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/AdlerMA14,
author = {Miri Adler and
Avi E. Mayo and
Uri Alon},
title = {Logarithmic and Power Law Input-Output Relations in Sensory Systems
with Fold-Change Detection},
journal = {PLoS Comput. Biol.},
volume = {10},
number = {8},
year = {2014},
url = {https://doi.org/10.1371/journal.pcbi.1003781},
doi = {10.1371/JOURNAL.PCBI.1003781},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/AdlerMA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/BrenHDKA13,
author = {Anat Bren and
Yuval Hart and
Erez Dekel and
Daniel Koster and
Uri Alon},
title = {The last generation of bacterial growth in limiting nutrient},
journal = {{BMC} Syst. Biol.},
volume = {7},
pages = {27},
year = {2013},
url = {https://doi.org/10.1186/1752-0509-7-27},
doi = {10.1186/1752-0509-7-27},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/BrenHDKA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MadarDBZPA13,
author = {Daniel Madar and
Erez Dekel and
Anat Bren and
Anat Zimmer and
Ziv Porat and
Uri Alon},
title = {Promoter activity dynamics in the lag phase of Escherichia coli},
journal = {{BMC} Syst. Biol.},
volume = {7},
pages = {136},
year = {2013},
url = {https://doi.org/10.1186/1752-0509-7-136},
doi = {10.1186/1752-0509-7-136},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MadarDBZPA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SzekelySMA13,
author = {Pablo Szekely and
Hila Sheftel and
Avi E. Mayo and
Uri Alon},
title = {Evolutionary Tradeoffs between Economy and Effectiveness in Biological
Homeostasis Systems},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {8},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1003163},
doi = {10.1371/JOURNAL.PCBI.1003163},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/SzekelySMA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icccrea/NoyHARMA12,
author = {Lior Noy and
Yuval Hart and
Natalie Andrew and
Omer Ramote and
Avi E. Mayo and
Uri Alon},
editor = {Mary Lou Maher and
Kristian J. Hammond and
Alison Pease and
Rafael P{\'{e}}rez y P{\'{e}}rez and
Dan Ventura and
Geraint A. Wiggins},
title = {A quantitative study of creative leaps},
booktitle = {Proceedings of the Third International Conference on Computational
Creativity, {ICCC} 2012, Dublin, Ireland, May 30 - June 1, 2012},
pages = {72--76},
publisher = {computationalcreativity.net},
year = {2012},
url = {http://computationalcreativity.net/iccc2012/wp-content/uploads/2012/05/072-Noy.pdf},
timestamp = {Fri, 11 Dec 2020 14:55:31 +0100},
biburl = {https://dblp.org/rec/conf/icccrea/NoyHARMA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MadarDBA11,
author = {Daniel Madar and
Erez Dekel and
Anat Bren and
Uri Alon},
title = {Negative auto-regulation increases the input dynamic-range of the
arabinose system of Escherichia coli},
journal = {{BMC} Syst. Biol.},
volume = {5},
pages = {111},
year = {2011},
url = {https://doi.org/10.1186/1752-0509-5-111},
doi = {10.1186/1752-0509-5-111},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MadarDBA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HartMMA11,
author = {Yuval Hart and
Avraham E. Mayo and
Ron Milo and
Uri Alon},
title = {Robust Control of {PEP} Formation Rate in the Carbon Fixation Pathway
of C\({}_{\mbox{4 }}\)Plants by a Bi-functional Enzyme},
journal = {{BMC} Syst. Biol.},
volume = {5},
pages = {171},
year = {2011},
url = {https://doi.org/10.1186/1752-0509-5-171},
doi = {10.1186/1752-0509-5-171},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/HartMMA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamads/ShovalAS11,
author = {Oren Shoval and
Uri Alon and
Eduardo D. Sontag},
title = {Symmetry Invariance for Adapting Biological Systems},
journal = {{SIAM} J. Appl. Dyn. Syst.},
volume = {10},
number = {3},
pages = {857--886},
year = {2011},
url = {https://doi.org/10.1137/100818078},
doi = {10.1137/100818078},
timestamp = {Tue, 25 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamads/ShovalAS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cdc/ShovalAS11,
author = {Oren Shoval and
Uri Alon and
Eduardo D. Sontag},
title = {Input symmetry invariance, and applications to biological systems},
booktitle = {50th {IEEE} Conference on Decision and Control and European Control
Conference, 11th European Control Conference, {CDC/ECC} 2011, Orlando,
FL, USA, December 12-15, 2011},
pages = {2233--2238},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/CDC.2011.6160251},
doi = {10.1109/CDC.2011.6160251},
timestamp = {Wed, 24 Feb 2021 08:49:08 +0100},
biburl = {https://dblp.org/rec/conf/cdc/ShovalAS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Frenkel-MorgensternCGEPISCLCDPA10,
author = {Milana Frenkel{-}Morgenstern and
Ariel A. Cohen and
Naama Geva{-}Zatorsky and
Eran Eden and
Jaime Prilusky and
Irina Issaeva and
Alex Sigal and
Cellina Cohen{-}Saidon and
Yuvalal Liron and
Lydia Cohen and
Tamar Danon and
Natalie Perzov and
Uri Alon},
title = {Dynamic Proteomics: a database for dynamics and localizations of endogenous
fluorescently-tagged proteins in living human cells},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {508--512},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp808},
doi = {10.1093/NAR/GKP808},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Frenkel-MorgensternCGEPISCLCDPA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1012-2782,
author = {Oren Shoval and
Uri Alon and
Eduardo D. Sontag},
title = {Symmetry invariance for adapting biological systems},
journal = {CoRR},
volume = {abs/1012.2782},
year = {2010},
url = {http://arxiv.org/abs/1012.2782},
eprinttype = {arXiv},
eprint = {1012.2782},
timestamp = {Fri, 02 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1012-2782.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RahatALS09,
author = {Ofer Rahat and
Uri Alon and
Yaakov Levy and
Gideon Schreiber},
title = {Understanding hydrogen-bond patterns in proteins using network motifs},
journal = {Bioinform.},
volume = {25},
number = {22},
pages = {2921--2928},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp541},
doi = {10.1093/BIOINFORMATICS/BTP541},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RahatALS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/ShinarRA09,
author = {Guy Shinar and
Joshua D. Rabinowitz and
Uri Alon},
title = {Robustness in Glyoxylate Bypass Regulation},
journal = {PLoS Comput. Biol.},
volume = {5},
number = {3},
year = {2009},
url = {https://doi.org/10.1371/journal.pcbi.1000297},
doi = {10.1371/JOURNAL.PCBI.1000297},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/ShinarRA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KashtanMKA09,
author = {Nadav Kashtan and
Avi E. Mayo and
Tomer Kalisky and
Uri Alon},
title = {An Analytically Solvable Model for Rapid Evolution of Modular Structure},
journal = {PLoS Comput. Biol.},
volume = {5},
number = {4},
year = {2009},
url = {https://doi.org/10.1371/journal.pcbi.1000355},
doi = {10.1371/JOURNAL.PCBI.1000355},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/KashtanMKA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/ZaslaverKBJMDAI09,
author = {Alon Zaslaver and
Shai Kaplan and
Anat Bren and
Adrian Jinich and
Avi E. Mayo and
Erez Dekel and
Uri Alon and
Shalev Itzkovitz},
title = {Invariant Distribution of Promoter Activities in \emph{Escherichia
coli}},
journal = {PLoS Comput. Biol.},
volume = {5},
number = {10},
year = {2009},
url = {https://doi.org/10.1371/journal.pcbi.1000545},
doi = {10.1371/JOURNAL.PCBI.1000545},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/ZaslaverKBJMDAI09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamam/ShinarAF09,
author = {Guy Shinar and
Uri Alon and
Martin Feinberg},
title = {Sensitivity and Robustness in Chemical Reaction Networks},
journal = {{SIAM} J. Appl. Math.},
volume = {69},
number = {4},
pages = {977--998},
year = {2009},
url = {https://doi.org/10.1137/080719820},
doi = {10.1137/080719820},
timestamp = {Wed, 20 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamam/ShinarAF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/ParterKA08,
author = {Merav Parter and
Nadav Kashtan and
Uri Alon},
title = {Facilitated Variation: How Evolution Learns from Past Environments
To Generalize to New Environments},
journal = {PLoS Comput. Biol.},
volume = {4},
number = {11},
year = {2008},
url = {https://doi.org/10.1371/journal.pcbi.1000206},
doi = {10.1371/JOURNAL.PCBI.1000206},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/ParterKA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/advcs/ItzkovitzMKLLA06,
author = {Shalev Itzkovitz and
Ron Milo and
Nadav Kashtan and
Reuven Levitt and
Amir Lahav and
Uri Alon},
title = {Recurring Harmonic Walks and Network motifs in Western Music},
journal = {Adv. Complex Syst.},
volume = {9},
number = {1-2},
pages = {121--132},
year = {2006},
url = {https://doi.org/10.1142/S021952590600063X},
doi = {10.1142/S021952590600063X},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/advcs/ItzkovitzMKLLA06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KashtanIMA04,
author = {Nadav Kashtan and
Shalev Itzkovitz and
Ron Milo and
Uri Alon},
title = {Efficient sampling algorithm for estimating subgraph concentrations
and detecting network motifs},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1746--1758},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth163},
doi = {10.1093/BIOINFORMATICS/BTH163},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KashtanIMA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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