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ORCIDBibTeX records: Christopher W. V. Hogue
@article{DBLP:journals/ploscb/JagannathanHT21,
author = {N. Suhas Jagannathan and
Christopher W. V. Hogue and
Lisa Tucker{-}Kellogg},
title = {Computational modeling suggests binding-induced expansion of Epsin
disordered regions upon association with {AP2}},
journal = {PLoS Comput. Biol.},
volume = {17},
number = {1},
year = {2021},
url = {https://doi.org/10.1371/journal.pcbi.1008474},
doi = {10.1371/JOURNAL.PCBI.1008474},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/JagannathanHT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/JagannathanHT20,
author = {N. Suhas Jagannathan and
Christopher W. V. Hogue and
Lisa Tucker{-}Kellogg},
title = {De novo Ensemble Modeling Suggests that AP2-Binding to Disordered
Regions Can Increase StericVolume of Epsin but Not Eps15},
booktitle = {Pacific Symposium on Biocomputing 2020, Fairmont Orchid, Hawaii, USA,
January 3-7, 2020},
pages = {183--194},
year = {2020},
url = {https://psb.stanford.edu/psb-online/proceedings/psb20/Jagannathan.pdf},
timestamp = {Fri, 13 Aug 2021 16:31:26 +0200},
biburl = {https://dblp.org/rec/conf/psb/JagannathanHT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HottaRLWMGHSOHMS14,
author = {Kinya Hotta and
Soumya Ranganathan and
Ruchuan Liu and
Fei Wu and
Hiroaki Machiyama and
Rong Gao and
Hiroaki Hirata and
Neelesh Soni and
Takashi Ohe and
Christopher W. V. Hogue and
M. S. Madhusudhan and
Yasuhiro Sawada},
title = {Biophysical Properties of Intrinsically Disordered p130Cas Substrate
Domain - Implication in Mechanosensing},
journal = {PLoS Comput. Biol.},
volume = {10},
number = {4},
year = {2014},
url = {https://doi.org/10.1371/journal.pcbi.1003532},
doi = {10.1371/JOURNAL.PCBI.1003532},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HottaRLWMGHSOHMS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuYH11,
author = {Chengcheng Liu and
Mingxi Yao and
Christopher W. V. Hogue},
title = {Near-membrane ensemble elongation in the proline-rich {LRP6} intracellular
domain may explain the mysterious initiation of the Wnt signaling
pathway},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-13}},
pages = {S13},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S13-S13},
doi = {10.1186/1471-2105-12-S13-S13},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuYH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BetelBIDTH07,
author = {Doron Betel and
Kevin E. Breitkreuz and
Ruth Isserlin and
Danielle Dewar{-}Darch and
Mike Tyers and
Christopher W. V. Hogue},
title = {Structure-Templated Predictions of Novel Protein Interactions from
Sequence Information},
journal = {PLoS Comput. Biol.},
volume = {3},
number = {9},
year = {2007},
url = {https://doi.org/10.1371/journal.pcbi.0030182},
doi = {10.1371/JOURNAL.PCBI.0030182},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/BetelBIDTH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SnyderFDSH06,
author = {Kevin A. Snyder and
Howard J. Feldman and
Michel Dumontier and
John J. Salama and
Christopher W. V. Hogue},
title = {Domain-based small molecule binding site annotation},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {152},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-152},
doi = {10.1186/1471-2105-7-152},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SnyderFDSH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlfaranoAA05,
author = {C. Alfarano and
C. E. Andrade and
K. Anthony and
N. Bahroos and
Martha Bajec and
K. Bantoft and
Doron Betel and
B. Bobechko and
K. Boutilier and
E. Burgess and
K. Buzadzija and
R. Cavero and
C. D'Abreo and
Ian M. Donaldson and
D. Dorairajoo and
Michel Justin Dumontier and
M. R. Dumontier and
V. Earles and
R. Farrall and
Howard J. Feldman and
E. Garderman and
Y. Gong and
R. Gonzaga and
V. Grytsan and
E. Gryz and
V. Gu and
E. Haldorsen and
A. Halupa and
Robin Haw and
A. Hrvojic and
L. Hurrell and
Ruth Isserlin and
F. Jack and
F. Juma and
A. Khan and
T. Kon and
S. Konopinsky and
V. Le and
E. Lee and
S. Ling and
M. Magidin and
J. Moniakis and
J. Montojo and
S. Moore and
B. Muskat and
I. Ng and
J. P. Paraiso and
Benjamin D. Parker and
Greg Pintilie and
R. Pirone and
John J. Salama and
S. Sgro and
T. Shan and
Y. Shu and
J. Siew and
D. Skinner and
Kevin A. Snyder and
R. Stasiuk and
D. Strumpf and
Brigitte Tuekam and
S. Tao and
Z. Wang and
M. White and
R. Willis and
Cheryl Wolting and
S. Wong and
A. Wrong and
C. Xin and
R. Yao and
B. Yates and
Shudong Zhang and
K. Zheng and
Tony Pawson and
B. F. Francis Ouellette and
Christopher W. V. Hogue},
title = {The Biomolecular Interaction Network Database and related tools 2005
update},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {418--424},
year = {2005},
url = {https://doi.org/10.1093/nar/gki051},
doi = {10.1093/NAR/GKI051},
timestamp = {Tue, 24 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AlfaranoAA05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sg/PintilieTH05,
author = {Greg Pintilie and
Brigitte Tuekam and
Christopher W. V. Hogue},
editor = {Andreas Butz and
Brian D. Fisher and
Antonio Kr{\"{u}}ger and
Patrick Olivier},
title = {Generation of Glyphs for Conveying Complex Information, with Application
to Protein Representations},
booktitle = {Smart Graphics, 5th International Symposium, {SG} 2005, Frauenw{\"{o}}rth
Cloister, Germany, August 22-24, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3638},
pages = {90--102},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11536482\_8},
doi = {10.1007/11536482\_8},
timestamp = {Sat, 30 Sep 2023 09:56:12 +0200},
biburl = {https://dblp.org/rec/conf/sg/PintilieTH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ibmsj/LewisRHH04,
author = {Kimberly N. Lewis and
Mark D. Robinson and
Timothy R. Hughes and
Christopher W. V. Hogue},
title = {MyMed: {A} database system for biomedical research on {MEDLINE} data},
journal = {{IBM} Syst. J.},
volume = {43},
number = {4},
pages = {756},
year = {2004},
url = {https://doi.org/10.1147/sj.434.0756},
doi = {10.1147/SJ.434.0756},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ibmsj/LewisRHH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fpl/AlexRIH04,
author = {Anish Alex and
Jonathan Rose and
Ruth Isserlin{-}Weinberger and
Christopher W. V. Hogue},
editor = {J{\"{u}}rgen Becker and
Marco Platzner and
Serge Vernalde},
title = {Hardware Accelerated Novel Protein Identification},
booktitle = {Field Programmable Logic and Application, 14th International Conference
, {FPL} 2004, Leuven, Belgium, August 30-September 1, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3203},
pages = {13--22},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30117-2\_4},
doi = {10.1007/978-3-540-30117-2\_4},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/fpl/AlexRIH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BetelIH04,
author = {Doron Betel and
Ruth Isserlin{-}Weinberger and
Christopher W. V. Hogue},
title = {Analysis of domain correlations in yeast protein complexes},
booktitle = {Proceedings Twelfth International Conference on Intelligent Systems
for Molecular Biology/Third European Conference on Computational Biology
2004, Glasgow, UK, July 31-August 4, 2004},
pages = {55--62},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth903},
doi = {10.1093/BIOINFORMATICS/BTH903},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/BetelIH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BaderH03,
author = {Gary D. Bader and
Christopher W. V. Hogue},
title = {An automated method for finding molecular complexes in large protein
interaction networks},
journal = {{BMC} Bioinform.},
volume = {4},
pages = {2},
year = {2003},
url = {https://doi.org/10.1186/1471-2105-4-2},
doi = {10.1186/1471-2105-4-2},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BaderH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DonaldsonMBWLTZBBMPH03,
author = {Ian M. Donaldson and
Joel D. Martin and
Berry de Bruijn and
Cheryl Wolting and
Vicki Lay and
Brigitte Tuekam and
Shudong Zhang and
Berivan Baskin and
Gary D. Bader and
Katerina Michalickova and
Tony Pawson and
Christopher W. V. Hogue},
title = {PreBIND and Textomy - mining the biomedical literature for protein-protein
interactions using a support vector machine},
journal = {{BMC} Bioinform.},
volume = {4},
pages = {11},
year = {2003},
url = {https://doi.org/10.1186/1471-2105-4-11},
doi = {10.1186/1471-2105-4-11},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DonaldsonMBWLTZBBMPH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BaderBH03,
author = {Gary D. Bader and
Doron Betel and
Christopher W. V. Hogue},
title = {{BIND:} the Biomolecular Interaction Network Database},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {248--250},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg056},
doi = {10.1093/NAR/GKG056},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BaderBH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DumontierH02,
author = {Michel Dumontier and
Christopher W. V. Hogue},
title = {{NBLAST:} a cluster variant of {BLAST} for NxN comparisons},
journal = {{BMC} Bioinform.},
volume = {3},
pages = {13},
year = {2002},
url = {https://doi.org/10.1186/1471-2105-3-13},
doi = {10.1186/1471-2105-3-13},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DumontierH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BetelH02,
author = {Doron Betel and
Christopher W. V. Hogue},
title = {Kangaroo - {A} pattern-matching program for biological sequences},
journal = {{BMC} Bioinform.},
volume = {3},
pages = {20},
year = {2002},
url = {https://doi.org/10.1186/1471-2105-3-20},
doi = {10.1186/1471-2105-3-20},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BetelH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MichalickovaBDLBIH02,
author = {Katerina Michalickova and
Gary D. Bader and
Michel Dumontier and
Hao Lieu and
Doron Betel and
Ruth Isserlin and
Christopher W. V. Hogue},
title = {SeqHound: biological sequence and structure database as a platform
for bioinformatics research},
journal = {{BMC} Bioinform.},
volume = {3},
pages = {32},
year = {2002},
url = {https://doi.org/10.1186/1471-2105-3-32},
doi = {10.1186/1471-2105-3-32},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MichalickovaBDLBIH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DumontierMH02,
author = {Michel Dumontier and
Katerina Michalickova and
Christopher W. V. Hogue},
title = {Species-specific protein sequence and fold optimizations},
journal = {{BMC} Bioinform.},
volume = {3},
pages = {39},
year = {2002},
url = {https://doi.org/10.1186/1471-2105-3-39},
doi = {10.1186/1471-2105-3-39},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DumontierMH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/wi/02/BaderH02,
author = {Gary D. Bader and
Christopher W. V. Hogue},
editor = {Christoph W. Sensen},
title = {Bioinformatics: Interaction Databases},
booktitle = {Essentials of Genomics and Bioinformatics},
pages = {363--379},
publisher = {Wiley},
year = {2002},
url = {https://doi.org/10.1002/9783527612642.ch16},
doi = {10.1002/9783527612642.CH16},
timestamp = {Tue, 12 May 2020 16:02:38 +0200},
biburl = {https://dblp.org/rec/books/wi/02/BaderH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SalamaFH01,
author = {John J. Salama and
Howard J. Feldman and
Christopher W. V. Hogue},
title = {{VISTRAJ:} exploring protein conformational space},
journal = {Bioinform.},
volume = {17},
number = {9},
pages = {851--852},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.9.851},
doi = {10.1093/BIOINFORMATICS/17.9.851},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SalamaFH01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BaderDWOPH01,
author = {Gary D. Bader and
Ian M. Donaldson and
Cheryl Wolting and
B. F. Francis Ouellette and
Tony Pawson and
Christopher W. V. Hogue},
title = {{BIND} - The Biomolecular Interaction Network Database},
journal = {Nucleic Acids Res.},
volume = {29},
number = {1},
pages = {242--245},
year = {2001},
url = {https://doi.org/10.1093/nar/29.1.242},
doi = {10.1093/NAR/29.1.242},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BaderDWOPH01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaderH00,
author = {Gary D. Bader and
Christopher W. V. Hogue},
title = {BIND-a data specification for storing and describing biomolecular
interactions, molecular complexes and pathways},
journal = {Bioinform.},
volume = {16},
number = {5},
pages = {465--477},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.5.465},
doi = {10.1093/BIOINFORMATICS/16.5.465},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaderH00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alsc/MichalickovaDH00,
author = {Katerina Michalickova and
Moyez Dharsee and
Christopher W. V. Hogue},
title = {Sequence Analysis on a 216-Processor Beowulf Cluster},
booktitle = {4th Annual Linux Showcase {\&} Conference 2000, Atlanta, Georgia,
USA, October 10-14, 2000},
publisher = {{USENIX} Association},
year = {2000},
url = {https://www.usenix.org/conference/als-2000/sequence-analysis-216-processor-beowulf-cluster},
timestamp = {Wed, 04 Jul 2018 13:06:34 +0200},
biburl = {https://dblp.org/rec/conf/alsc/MichalickovaDH00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hcw/DharseeH00,
author = {Moyez Dharsee and
Christopher W. V. Hogue},
title = {MoBiDiCK: {A} Tool for Distributed Computing on the Internet},
booktitle = {9th Heterogeneous Computing Workshop, {HCW} 2000, Cancun, Mexico,
May 1, 2000},
pages = {323--335},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/HCW.2000.843755},
doi = {10.1109/HCW.2000.843755},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hcw/DharseeH00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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