BibTeX records: Petros Koumoutsakos

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@article{DBLP:journals/corr/abs-2402-00972,
  author       = {Jan{-}Philipp von Bassewitz and
                  Sebastian Kaltenbach and
                  Petros Koumoutsakos},
  title        = {Closure Discovery for Coarse-Grained Partial Differential Equations
                  using Multi-Agent Reinforcement Learning},
  journal      = {CoRR},
  volume       = {abs/2402.00972},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.00972},
  doi          = {10.48550/ARXIV.2402.00972},
  eprinttype    = {arXiv},
  eprint       = {2402.00972},
  timestamp    = {Fri, 09 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-00972.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-17157,
  author       = {Han Gao and
                  Sebastian Kaltenbach and
                  Petros Koumoutsakos},
  title        = {Generative Learning for Forecasting the Dynamics of Complex Systems},
  journal      = {CoRR},
  volume       = {abs/2402.17157},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.17157},
  doi          = {10.48550/ARXIV.2402.17157},
  eprinttype    = {arXiv},
  eprint       = {2402.17157},
  timestamp    = {Mon, 25 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-17157.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2302-11101,
  author       = {Pantelis{-}Rafail Vlachas and
                  Petros Koumoutsakos},
  title        = {Learning from Predictions: Fusing Training and Autoregressive Inference
                  for Long-Term Spatiotemporal Forecasts},
  journal      = {CoRR},
  volume       = {abs/2302.11101},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2302.11101},
  doi          = {10.48550/ARXIV.2302.11101},
  eprinttype    = {arXiv},
  eprint       = {2302.11101},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2302-11101.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-02189,
  author       = {Sebastian Kaltenbach and
                  Phaedon{-}Stelios Koutsourelakis and
                  Petros Koumoutsakos},
  title        = {Interpretable reduced-order modeling with time-scale separation},
  journal      = {CoRR},
  volume       = {abs/2303.02189},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2303.02189},
  doi          = {10.48550/ARXIV.2303.02189},
  eprinttype    = {arXiv},
  eprint       = {2303.02189},
  timestamp    = {Thu, 16 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2303-02189.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-03404,
  author       = {Lucas Amoudruz and
                  Athena Economides and
                  Georgios Arampatzis and
                  Petros Koumoutsakos},
  title        = {The stress-free state of human erythrocytes: data driven inference
                  of a transferable {RBC} model},
  journal      = {CoRR},
  volume       = {abs/2303.03404},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2303.03404},
  doi          = {10.48550/ARXIV.2303.03404},
  eprinttype    = {arXiv},
  eprint       = {2303.03404},
  timestamp    = {Wed, 15 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2303-03404.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-04679,
  author       = {Petr Karnakov and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Flow reconstruction by multiresolution optimization of a discrete
                  loss with automatic differentiation},
  journal      = {CoRR},
  volume       = {abs/2303.04679},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2303.04679},
  doi          = {10.48550/ARXIV.2303.04679},
  eprinttype    = {arXiv},
  eprint       = {2303.04679},
  timestamp    = {Thu, 16 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2303-04679.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2304-01732,
  author       = {Ivica Kicic and
                  Pantelis{-}Rafail Vlachas and
                  Georgios Arampatzis and
                  Michail Chatzimanolakis and
                  Leonidas J. Guibas and
                  Petros Koumoutsakos},
  title        = {Adaptive learning of effective dynamics: Adaptive real-time, online
                  modeling for complex systems},
  journal      = {CoRR},
  volume       = {abs/2304.01732},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2304.01732},
  doi          = {10.48550/ARXIV.2304.01732},
  eprinttype    = {arXiv},
  eprint       = {2304.01732},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2304-01732.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-10548,
  author       = {Daniel W{\"{a}}lchli and
                  Pascal Weber and
                  Petros Koumoutsakos},
  title        = {Discovering Individual Rewards in Collective Behavior through Inverse
                  Multi-Agent Reinforcement Learning},
  journal      = {CoRR},
  volume       = {abs/2305.10548},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2305.10548},
  doi          = {10.48550/ARXIV.2305.10548},
  eprinttype    = {arXiv},
  eprint       = {2305.10548},
  timestamp    = {Thu, 25 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2305-10548.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-05812,
  author       = {Emmanuel Menier and
                  Sebastian Kaltenbach and
                  Mouadh Yagoubi and
                  Marc Schoenauer and
                  Petros Koumoutsakos},
  title        = {Interpretable learning of effective dynamics for multiscale systems},
  journal      = {CoRR},
  volume       = {abs/2309.05812},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2309.05812},
  doi          = {10.48550/ARXIV.2309.05812},
  eprinttype    = {arXiv},
  eprint       = {2309.05812},
  timestamp    = {Wed, 20 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2309-05812.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2312-00907,
  author       = {Rambod Mojgani and
                  Daniel W{\"{a}}lchli and
                  Yifei Guan and
                  Petros Koumoutsakos and
                  Pedram Hassanzadeh},
  title        = {Extreme Event Prediction with Multi-agent Reinforcement Learning-based
                  Parametrization of Atmospheric and Oceanic Turbulence},
  journal      = {CoRR},
  volume       = {abs/2312.00907},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2312.00907},
  doi          = {10.48550/ARXIV.2312.00907},
  eprinttype    = {arXiv},
  eprint       = {2312.00907},
  timestamp    = {Fri, 08 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2312-00907.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2312-05063,
  author       = {Michal Balcerak and
                  Ivan Ezhov and
                  Petr Karnakov and
                  Sergey Litvinov and
                  Petros Koumoutsakos and
                  Jonas Weidner and
                  Ray Zirui Zhang and
                  John S. Lowengrub and
                  Benedikt Wiestler and
                  Bjoern H. Menze},
  title        = {Individualizing Glioma Radiotherapy Planning by Optimization of a
                  Data and Physics Informed Discrete Loss},
  journal      = {CoRR},
  volume       = {abs/2312.05063},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2312.05063},
  doi          = {10.48550/ARXIV.2312.05063},
  eprinttype    = {arXiv},
  eprint       = {2312.05063},
  timestamp    = {Tue, 09 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2312-05063.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aisy/AmoudruzK22,
  author       = {Lucas Amoudruz and
                  Petros Koumoutsakos},
  title        = {Independent Control and Path Planning of Microswimmers with a Uniform
                  Magnetic Field},
  journal      = {Adv. Intell. Syst.},
  volume       = {4},
  number       = {3},
  year         = {2022},
  url          = {https://doi.org/10.1002/aisy.202100183},
  doi          = {10.1002/AISY.202100183},
  timestamp    = {Wed, 18 May 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/aisy/AmoudruzK22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/VlachasAUK22,
  author       = {Pantelis{-}Rafail Vlachas and
                  Georgios Arampatzis and
                  Caroline Uhler and
                  Petros Koumoutsakos},
  title        = {Multiscale simulations of complex systems by learning their effective
                  dynamics},
  journal      = {Nat. Mach. Intell.},
  volume       = {4},
  number       = {4},
  pages        = {359--366},
  year         = {2022},
  url          = {https://doi.org/10.1038/s42256-022-00464-w},
  doi          = {10.1038/S42256-022-00464-W},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/natmi/VlachasAUK22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-13319,
  author       = {Pascal Weber and
                  Daniel W{\"{a}}lchli and
                  Mustafa Zeqiri and
                  Petros Koumoutsakos},
  title        = {Remember and Forget Experience Replay for Multi-Agent Reinforcement
                  Learning},
  journal      = {CoRR},
  volume       = {abs/2203.13319},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2203.13319},
  doi          = {10.48550/ARXIV.2203.13319},
  eprinttype    = {arXiv},
  eprint       = {2203.13319},
  timestamp    = {Tue, 29 Mar 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2203-13319.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2205-04611,
  author       = {Petr Karnakov and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Optimizing a DIscrete Loss {(ODIL)} to solve forward and inverse problems
                  for partial differential equations using machine learning tools},
  journal      = {CoRR},
  volume       = {abs/2205.04611},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2205.04611},
  doi          = {10.48550/ARXIV.2205.04611},
  eprinttype    = {arXiv},
  eprint       = {2205.04611},
  timestamp    = {Wed, 11 May 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2205-04611.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ftrob/PappasDGKKKLTT21,
  author       = {George J. Pappas and
                  Kostas Daniilidis and
                  Leonidas J. Guibas and
                  Lydia E. Kavraki and
                  Petros Koumoutsakos and
                  Kostas J. Kyriakopoulos and
                  John Lygeros and
                  Michael S. Triantafyllou and
                  Panagiotis Tsiotras},
  title        = {Robotics in the {AI} era: {A} vision for a Hellenic Robotics Initiative},
  journal      = {Found. Trends Robotics},
  volume       = {9},
  number       = {3},
  pages        = {201--265},
  year         = {2021},
  url          = {https://doi.org/10.1561/2300000069},
  doi          = {10.1561/2300000069},
  timestamp    = {Wed, 08 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ftrob/PappasDGKKKLTT21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/NovatiLK21,
  author       = {Guido Novati and
                  Hugues Lascombes de Laroussilhe and
                  Petros Koumoutsakos},
  title        = {Automating turbulence modelling by multi-agent reinforcement learning},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {1},
  pages        = {87--96},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-020-00272-0},
  doi          = {10.1038/S42256-020-00272-0},
  timestamp    = {Wed, 15 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/natmi/NovatiLK21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/NovatiLK21a,
  author       = {Guido Novati and
                  Hugues Lascombes de Laroussilhe and
                  Petros Koumoutsakos},
  title        = {Publisher Correction: Automating turbulence modelling by multi-agent
                  reinforcement learning},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {1},
  pages        = {98},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-021-00293-3},
  doi          = {10.1038/S42256-021-00293-3},
  timestamp    = {Wed, 15 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/natmi/NovatiLK21a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/NovatiLK21b,
  author       = {Guido Novati and
                  Hugues Lascombes de Laroussilhe and
                  Petros Koumoutsakos},
  title        = {Publisher Correction: Automating turbulence modelling by multi-agent
                  reinforcement learning},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {1},
  pages        = {99},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-021-00295-1},
  doi          = {10.1038/S42256-021-00295-1},
  timestamp    = {Wed, 15 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/natmi/NovatiLK21b.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2102-08810,
  author       = {Pantelis{-}Rafail Vlachas and
                  Julija Zavadlav and
                  Matej Praprotnik and
                  Petros Koumoutsakos},
  title        = {Accelerated Simulations of Molecular Systems through Learning of their
                  Effective Dynamics},
  journal      = {CoRR},
  volume       = {abs/2102.08810},
  year         = {2021},
  url          = {https://arxiv.org/abs/2102.08810},
  eprinttype    = {arXiv},
  eprint       = {2102.08810},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2102-08810.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2102-10536,
  author       = {Peter Gunnarson and
                  Ioannis Mandralis and
                  Guido Novati and
                  Petros Koumoutsakos and
                  John O. Dabiri},
  title        = {Learning Efficient Navigation in Vortical Flow Fields},
  journal      = {CoRR},
  volume       = {abs/2102.10536},
  year         = {2021},
  url          = {https://arxiv.org/abs/2102.10536},
  eprinttype    = {arXiv},
  eprint       = {2102.10536},
  timestamp    = {Wed, 24 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2102-10536.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2103-01513,
  author       = {Petr Karnakov and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Computing foaming flows across scales: from breaking waves to microfluidics},
  journal      = {CoRR},
  volume       = {abs/2103.01513},
  year         = {2021},
  url          = {https://arxiv.org/abs/2103.01513},
  eprinttype    = {arXiv},
  eprint       = {2103.01513},
  timestamp    = {Thu, 04 Mar 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2103-01513.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2105-00771,
  author       = {Ioannis Mandralis and
                  Pascal Weber and
                  Guido Novati and
                  Petros Koumoutsakos},
  title        = {Learning swimming escape patterns under energy constraints},
  journal      = {CoRR},
  volume       = {abs/2105.00771},
  year         = {2021},
  url          = {https://arxiv.org/abs/2105.00771},
  eprinttype    = {arXiv},
  eprint       = {2105.00771},
  timestamp    = {Wed, 23 Feb 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2105-00771.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-11144,
  author       = {Hyunji Jane Bae and
                  Petros Koumoutsakos},
  title        = {Scientific multi-agent reinforcement learning for wall-models of turbulent
                  flows},
  journal      = {CoRR},
  volume       = {abs/2106.11144},
  year         = {2021},
  url          = {https://arxiv.org/abs/2106.11144},
  eprinttype    = {arXiv},
  eprint       = {2106.11144},
  timestamp    = {Thu, 01 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2106-11144.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cphysics/AlexeevALK20,
  author       = {Dmitry Alexeev and
                  Lucas Amoudruz and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Mirheo: High-performance mesoscale simulations for microfluidics},
  journal      = {Comput. Phys. Commun.},
  volume       = {254},
  pages        = {107298},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.cpc.2020.107298},
  doi          = {10.1016/J.CPC.2020.107298},
  timestamp    = {Thu, 06 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cphysics/AlexeevALK20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nn/VlachasPHSGOK20,
  author       = {Pantelis{-}Rafail Vlachas and
                  Jaideep Pathak and
                  Brian R. Hunt and
                  Themistoklis P. Sapsis and
                  Michelle Girvan and
                  Edward Ott and
                  Petros Koumoutsakos},
  title        = {Backpropagation algorithms and Reservoir Computing in Recurrent Neural
                  Networks for the forecasting of complex spatiotemporal dynamics},
  journal      = {Neural Networks},
  volume       = {126},
  pages        = {191--217},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.neunet.2020.02.016},
  doi          = {10.1016/J.NEUNET.2020.02.016},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nn/VlachasPHSGOK20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/WalchliMEAABK20,
  author       = {Daniel W{\"{a}}lchli and
                  Sergio M. Martin and
                  Athena Economides and
                  Lucas Amoudruz and
                  Georgios Arampatzis and
                  Xin Bian and
                  Petros Koumoutsakos},
  title        = {Load Balancing in Large Scale Bayesian Inference},
  booktitle    = {{PASC} '20: Platform for Advanced Scientific Computing Conference,
                  Geneva, Switzerland, June 29 - July 1, 2020},
  pages        = {5:1--5:12},
  publisher    = {{ACM}},
  year         = {2020},
  url          = {https://doi.org/10.1145/3394277.3401849},
  doi          = {10.1145/3394277.3401849},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/WalchliMEAABK20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/KarnakovWLK20,
  author       = {Petr Karnakov and
                  Fabian Wermelinger and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Aphros: High Performance Software for Multiphase Flows with Large
                  Scale Bubble and Drop Clusters},
  booktitle    = {{PASC} '20: Platform for Advanced Scientific Computing Conference,
                  Geneva, Switzerland, June 29 - July 1, 2020},
  pages        = {12:1--12:10},
  publisher    = {{ACM}},
  year         = {2020},
  url          = {https://doi.org/10.1145/3394277.3401856},
  doi          = {10.1145/3394277.3401856},
  timestamp    = {Mon, 22 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/KarnakovWLK20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-09023,
  author       = {Guido Novati and
                  Hugues Lascombes de Laroussilhe and
                  Petros Koumoutsakos},
  title        = {Automating Turbulence Modeling by Multi-Agent Reinforcement Learning},
  journal      = {CoRR},
  volume       = {abs/2005.09023},
  year         = {2020},
  url          = {https://arxiv.org/abs/2005.09023},
  eprinttype    = {arXiv},
  eprint       = {2005.09023},
  timestamp    = {Fri, 22 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2005-09023.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-13457,
  author       = {Sergio M. Martin and
                  Daniel W{\"{a}}lchli and
                  Georgios Arampatzis and
                  Petros Koumoutsakos},
  title        = {Korali: a High-Performance Computing Framework for Stochastic Optimization
                  and Bayesian Uncertainty Quantification},
  journal      = {CoRR},
  volume       = {abs/2005.13457},
  year         = {2020},
  url          = {https://arxiv.org/abs/2005.13457},
  eprinttype    = {arXiv},
  eprint       = {2005.13457},
  timestamp    = {Thu, 28 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2005-13457.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-13431,
  author       = {Pantelis{-}Rafail Vlachas and
                  Georgios Arampatzis and
                  Caroline Uhler and
                  Petros Koumoutsakos},
  title        = {Learning the Effective Dynamics of Complex Multiscale Systems},
  journal      = {CoRR},
  volume       = {abs/2006.13431},
  year         = {2020},
  url          = {https://arxiv.org/abs/2006.13431},
  eprinttype    = {arXiv},
  eprint       = {2006.13431},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2006-13431.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-10433,
  author       = {Francesco Varoli and
                  Guido Novati and
                  Pantelis{-}Rafail Vlachas and
                  Petros Koumoutsakos},
  title        = {Improved Memories Learning},
  journal      = {CoRR},
  volume       = {abs/2008.10433},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.10433},
  eprinttype    = {arXiv},
  eprint       = {2008.10433},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-10433.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/ByeonDABYMK19,
  author       = {Wonmin Byeon and
                  Manuel Dom{\'{\i}}nguez{-}Rodrigo and
                  Georgios Arampatzis and
                  Enrique Baquedano and
                  Jos{\'{e}} Yravedra and
                  Miguel {\'{A}}ngel Mat{\'{e}}{-}Gonz{\'{a}}lez and
                  Petros Koumoutsakos},
  title        = {Automated identification and deep classification of cut marks on bones
                  and its paleoanthropological implications},
  journal      = {J. Comput. Sci.},
  volume       = {32},
  pages        = {36--43},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.jocs.2019.02.005},
  doi          = {10.1016/J.JOCS.2019.02.005},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jocs/ByeonDABYMK19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/LipkovaAWAWDPPC19,
  author       = {Jana Lipkov{\'{a}} and
                  Panagiotis Angelikopoulos and
                  Stephen Wu and
                  Esther Alberts and
                  Benedikt Wiestler and
                  Christian Diehl and
                  Christine Preibisch and
                  Thomas Pyka and
                  Stephanie Combs and
                  Panagiotis E. Hadjidoukas and
                  Koen Van Leemput and
                  Petros Koumoutsakos and
                  John S. Lowengrub and
                  Bjoern H. Menze},
  title        = {Personalized Radiotherapy Design for Glioblastoma: Integrating Mathematical
                  Tumor Models, Multimodal Scans, and Bayesian Inference},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {38},
  number       = {8},
  pages        = {1875--1884},
  year         = {2019},
  url          = {https://doi.org/10.1109/TMI.2019.2902044},
  doi          = {10.1109/TMI.2019.2902044},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/LipkovaAWAWDPPC19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/NovatiK19,
  author       = {Guido Novati and
                  Petros Koumoutsakos},
  editor       = {Kamalika Chaudhuri and
                  Ruslan Salakhutdinov},
  title        = {Remember and Forget for Experience Replay},
  booktitle    = {Proceedings of the 36th International Conference on Machine Learning,
                  {ICML} 2019, 9-15 June 2019, Long Beach, California, {USA}},
  series       = {Proceedings of Machine Learning Research},
  volume       = {97},
  pages        = {4851--4860},
  publisher    = {{PMLR}},
  year         = {2019},
  url          = {http://proceedings.mlr.press/v97/novati19a.html},
  timestamp    = {Tue, 11 Jun 2019 15:37:38 +0200},
  biburl       = {https://dblp.org/rec/conf/icml/NovatiK19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/ArampatzisWWRK19,
  author       = {Georgios Arampatzis and
                  Daniel W{\"{a}}lchli and
                  Pascal Weber and
                  Henri R{\"{a}}stas and
                  Petros Koumoutsakos},
  title        = {({\(\mu\)}, {\(\lambda\)})-CCMA-ES for Constrained Optimization with
                  an Application in Pharmacodynamics},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2019, Zurich, Switzerland, June 12-14, 2019},
  pages        = {15:1--15:9},
  publisher    = {{ACM}},
  year         = {2019},
  url          = {https://doi.org/10.1145/3324989.3325725},
  doi          = {10.1145/3324989.3325725},
  timestamp    = {Wed, 23 Feb 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/pasc/ArampatzisWWRK19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/KarnakovWCLK19,
  author       = {Petr Karnakov and
                  Fabian Wermelinger and
                  Michail Chatzimanolakis and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {A High Performance Computing Framework for Multiphase, Turbulent Flows
                  on Structured Grids},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2019, Zurich, Switzerland, June 12-14, 2019},
  pages        = {17:1--17:9},
  publisher    = {{ACM}},
  year         = {2019},
  url          = {https://doi.org/10.1145/3324989.3325727},
  doi          = {10.1145/3324989.3325727},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/KarnakovWCLK19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-00240,
  author       = {Xin Bian and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Bending models of lipid bilayer membranes: spontaneous curvature and
                  area-difference elasticity},
  journal      = {CoRR},
  volume       = {abs/1905.00240},
  year         = {2019},
  url          = {http://arxiv.org/abs/1905.00240},
  eprinttype    = {arXiv},
  eprint       = {1905.00240},
  timestamp    = {Mon, 27 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1905-00240.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-11075,
  author       = {Steven L. Brunton and
                  Bernd Noack and
                  Petros Koumoutsakos},
  title        = {Machine Learning for Fluid Mechanics},
  journal      = {CoRR},
  volume       = {abs/1905.11075},
  year         = {2019},
  url          = {http://arxiv.org/abs/1905.11075},
  eprinttype    = {arXiv},
  eprint       = {1905.11075},
  timestamp    = {Wed, 24 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1905-11075.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1910-05266,
  author       = {Pantelis{-}Rafail Vlachas and
                  Jaideep Pathak and
                  Brian R. Hunt and
                  Themistoklis P. Sapsis and
                  Michelle Girvan and
                  Edward Ott and
                  Petros Koumoutsakos},
  title        = {Forecasting of Spatio-temporal Chaotic Dynamics with Recurrent Neural
                  Networks: a comparative study of Reservoir Computing and Backpropagation
                  Algorithms},
  journal      = {CoRR},
  volume       = {abs/1910.05266},
  year         = {2019},
  url          = {http://arxiv.org/abs/1910.05266},
  eprinttype    = {arXiv},
  eprint       = {1910.05266},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1910-05266.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-04712,
  author       = {Dmitry Alexeev and
                  Lucas Amoudruz and
                  Sergey Litvinov and
                  Petros Koumoutsakos},
  title        = {Mirheo: High-Performance Mesoscale Simulations for Microfluidics},
  journal      = {CoRR},
  volume       = {abs/1911.04712},
  year         = {2019},
  url          = {http://arxiv.org/abs/1911.04712},
  eprinttype    = {arXiv},
  eprint       = {1911.04712},
  timestamp    = {Mon, 02 Dec 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1911-04712.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/KovalchukKKCLDS18,
  author       = {Sergey V. Kovalchuk and
                  Valeria V. Krzhizhanovskaya and
                  Petros Koumoutsakos and
                  Eleni N. Chatzi and
                  Michael Harold Lees and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {The art of computational science: Bridging gaps - forming alloys},
  journal      = {J. Comput. Sci.},
  volume       = {26},
  pages        = {190--192},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.jocs.2018.04.014},
  doi          = {10.1016/J.JOCS.2018.04.014},
  timestamp    = {Sun, 06 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jocs/KovalchukKKCLDS18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/WermelingerRHK18,
  author       = {Fabian Wermelinger and
                  Ursula Rasthofer and
                  Panagiotis E. Hadjidoukas and
                  Petros Koumoutsakos},
  title        = {Petascale simulations of compressible flows with interfaces},
  journal      = {J. Comput. Sci.},
  volume       = {26},
  pages        = {217--225},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.jocs.2018.01.008},
  doi          = {10.1016/J.JOCS.2018.01.008},
  timestamp    = {Tue, 25 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jocs/WermelingerRHK18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/ArampatzisWAWHK18,
  author       = {Georgios Arampatzis and
                  Daniel W{\"{a}}lchli and
                  Panagiotis Angelikopoulos and
                  Stephen Wu and
                  Panagiotis E. Hadjidoukas and
                  Petros Koumoutsakos},
  title        = {Langevin Diffusion for Population Based Sampling with an Application
                  in Bayesian Inference for Pharmacodynamics},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {40},
  number       = {3},
  year         = {2018},
  url          = {https://doi.org/10.1137/16M1107401},
  doi          = {10.1137/16M1107401},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/ArampatzisWAWHK18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/SukysRWHK18,
  author       = {Jonas Sukys and
                  Ursula Rasthofer and
                  Fabian Wermelinger and
                  Panagiotis E. Hadjidoukas and
                  Petros Koumoutsakos},
  title        = {Multilevel Control Variates for Uncertainty Quantification in Simulations
                  of Cloud Cavitation},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {40},
  number       = {5},
  pages        = {B1361--B1390},
  year         = {2018},
  url          = {https://doi.org/10.1137/17M1129684},
  doi          = {10.1137/17M1129684},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/SukysRWHK18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/ByeonWSK18,
  author       = {Wonmin Byeon and
                  Qin Wang and
                  Rupesh Kumar Srivastava and
                  Petros Koumoutsakos},
  title        = {ContextVP: Fully Context-Aware Video Prediction},
  booktitle    = {2018 {IEEE} Conference on Computer Vision and Pattern Recognition
                  Workshops, {CVPR} Workshops 2018, Salt Lake City, UT, USA, June 18-22,
                  2018},
  pages        = {1122--1126},
  publisher    = {Computer Vision Foundation / {IEEE} Computer Society},
  year         = {2018},
  url          = {http://openaccess.thecvf.com/content\_cvpr\_2018\_workshops/w19/html/Byeon\_ContextVP\_Fully\_Context-Aware\_CVPR\_2018\_paper.html},
  timestamp    = {Tue, 31 Aug 2021 14:00:25 +0200},
  biburl       = {https://dblp.org/rec/conf/cvpr/ByeonWSK18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccv/ByeonWSK18,
  author       = {Wonmin Byeon and
                  Qin Wang and
                  Rupesh Kumar Srivastava and
                  Petros Koumoutsakos},
  editor       = {Vittorio Ferrari and
                  Martial Hebert and
                  Cristian Sminchisescu and
                  Yair Weiss},
  title        = {ContextVP: Fully Context-Aware Video Prediction},
  booktitle    = {Computer Vision - {ECCV} 2018 - 15th European Conference, Munich,
                  Germany, September 8-14, 2018, Proceedings, Part {XVI}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11220},
  pages        = {781--797},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-01270-0\_46},
  doi          = {10.1007/978-3-030-01270-0\_46},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eccv/ByeonWSK18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1802-02674,
  author       = {Siddhartha Verma and
                  Guido Novati and
                  Petros Koumoutsakos},
  title        = {Efficient collective swimming by harnessing vortices through deep
                  reinforcement learning},
  journal      = {CoRR},
  volume       = {abs/1802.02674},
  year         = {2018},
  url          = {http://arxiv.org/abs/1802.02674},
  eprinttype    = {arXiv},
  eprint       = {1802.02674},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1802-02674.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1802-07486,
  author       = {Pantelis{-}Rafail Vlachas and
                  Wonmin Byeon and
                  Zhong Y. Wan and
                  Themistoklis P. Sapsis and
                  Petros Koumoutsakos},
  title        = {Data-Driven Forecasting of High-Dimensional Chaotic Systems with Long-Short
                  Term Memory Networks},
  journal      = {CoRR},
  volume       = {abs/1802.07486},
  year         = {2018},
  url          = {http://arxiv.org/abs/1802.07486},
  eprinttype    = {arXiv},
  eprint       = {1802.07486},
  timestamp    = {Sat, 23 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1802-07486.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-00499,
  author       = {Jana Lipkov{\'{a}} and
                  Panagiotis Angelikopoulos and
                  Stephen Wu and
                  Esther Alberts and
                  Benedikt Wiestler and
                  Christian Diehl and
                  Christine Preibisch and
                  Thomas Pyka and
                  Stephanie Combs and
                  Panagiotis E. Hadjidoukas and
                  Koen Van Leemput and
                  Petros Koumoutsakos and
                  John S. Lowengrub and
                  Bjoern H. Menze},
  title        = {Personalized Radiotherapy Planning for Glioma Using Multimodal Bayesian
                  Model Calibration},
  journal      = {CoRR},
  volume       = {abs/1807.00499},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.00499},
  eprinttype    = {arXiv},
  eprint       = {1807.00499},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-00499.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-03671,
  author       = {Guido Novati and
                  Lakshminarayanan Mahadevan and
                  Petros Koumoutsakos},
  title        = {Deep-Reinforcement-Learning for Gliding and Perching Bodies},
  journal      = {CoRR},
  volume       = {abs/1807.03671},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.03671},
  eprinttype    = {arXiv},
  eprint       = {1807.03671},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-03671.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-05827,
  author       = {Guido Novati and
                  Petros Koumoutsakos},
  title        = {Remember and Forget for Experience Replay},
  journal      = {CoRR},
  volume       = {abs/1807.05827},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.05827},
  eprinttype    = {arXiv},
  eprint       = {1807.05827},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-05827.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/VermaHWK17,
  author       = {Siddhartha Verma and
                  Panagiotis E. Hadjidoukas and
                  Philipp Wirth and
                  Petros Koumoutsakos},
  title        = {Multi-objective optimization of artificial swimmers},
  booktitle    = {2017 {IEEE} Congress on Evolutionary Computation, {CEC} 2017, Donostia,
                  San Sebasti{\'{a}}n, Spain, June 5-8, 2017},
  pages        = {1037--1046},
  publisher    = {{IEEE}},
  year         = {2017},
  url          = {https://doi.org/10.1109/CEC.2017.7969422},
  doi          = {10.1109/CEC.2017.7969422},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cec/VermaHWK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/KoumoutsakosCKL17,
  author       = {Petros Koumoutsakos and
                  Eleni N. Chatzi and
                  Valeria V. Krzhizhanovskaya and
                  Michael Lees and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {The Art of Computational Science, Bridging Gaps - Forming Alloys.
                  Preface for {ICCS} 2017},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {1--6},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.281},
  doi          = {10.1016/J.PROCS.2017.05.281},
  timestamp    = {Sun, 06 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/KoumoutsakosCKL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/VermaNNK17,
  author       = {Siddhartha Verma and
                  Guido Novati and
                  Flavio Noca and
                  Petros Koumoutsakos},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Fast Motion of Heaving Airfoils},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {235--244},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.166},
  doi          = {10.1016/J.PROCS.2017.05.166},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/VermaNNK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/RasthoferWHK17,
  author       = {Ursula Rasthofer and
                  Fabian Wermelinger and
                  P. Hadijdoukas and
                  Petros Koumoutsakos},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Large Scale Simulation of Cloud Cavitation Collapse},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {1763--1772},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.158},
  doi          = {10.1016/J.PROCS.2017.05.158},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/RasthoferWHK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/GroenBKHK17,
  author       = {Derek Groen and
                  Bartosz Bosak and
                  Valeria V. Krzhizhanovskaya and
                  Alfons G. Hoekstra and
                  Petros Koumoutsakos},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Multiscale Modelling and Simulation, 14th International Workshop},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {1811--1812},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.275},
  doi          = {10.1016/J.PROCS.2017.05.275},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/GroenBKHK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/EconomidesALANH17,
  author       = {Athena Economides and
                  Lucas Amoudruz and
                  Sergey Litvinov and
                  Dmitry Alexeev and
                  Sara Nizzero and
                  Panagiotis E. Hadjidoukas and
                  Diego Rossinelli and
                  Petros Koumoutsakos},
  title        = {Towards the Virtual Rheometer: High Performance Computing for the
                  Red Blood Cell Microstructure},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2017, Lugano, Switzerland, June 26 - 28, 2017},
  pages        = {1:1--1:13},
  publisher    = {{ACM}},
  year         = {2017},
  url          = {https://doi.org/10.1145/3093172.3093226},
  doi          = {10.1145/3093172.3093226},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/EconomidesALANH17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/VermaHWRK17,
  author       = {Siddhartha Verma and
                  Panagiotis E. Hadjidoukas and
                  Philipp Wirth and
                  Diego Rossinelli and
                  Petros Koumoutsakos},
  title        = {Pareto Optimal Swimmers},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2017, Lugano, Switzerland, June 26 - 28, 2017},
  pages        = {7:1--7:11},
  publisher    = {{ACM}},
  year         = {2017},
  url          = {https://doi.org/10.1145/3093172.3093232},
  doi          = {10.1145/3093172.3093232},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/VermaHWRK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iccS/2017,
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://www.sciencedirect.com/science/journal/18770509/108},
  timestamp    = {Thu, 08 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/2017.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/SukysRWHK17,
  author       = {Jonas Sukys and
                  Ursula Rasthofer and
                  Fabian Wermelinger and
                  Panagiotis E. Hadjidoukas and
                  Petros Koumoutsakos},
  title        = {Optimal fidelity multi-level Monte Carlo for quantification of uncertainty
                  in simulations of cloud cavitation collapse},
  journal      = {CoRR},
  volume       = {abs/1705.04374},
  year         = {2017},
  url          = {http://arxiv.org/abs/1705.04374},
  eprinttype    = {arXiv},
  eprint       = {1705.04374},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/SukysRWHK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1710-08518,
  author       = {Wonmin Byeon and
                  Qin Wang and
                  Rupesh Kumar Srivastava and
                  Petros Koumoutsakos},
  title        = {Fully Context-Aware Video Prediction},
  journal      = {CoRR},
  volume       = {abs/1710.08518},
  year         = {2017},
  url          = {http://arxiv.org/abs/1710.08518},
  eprinttype    = {arXiv},
  eprint       = {1710.08518},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1710-08518.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/KulakovaAHPK16,
  author       = {Lina Kulakova and
                  Panagiotis Angelikopoulos and
                  Panagiotis E. Hadjidoukas and
                  Costas Papadimitriou and
                  Petros Koumoutsakos},
  editor       = {Torsten Hoefler and
                  David E. Keyes and
                  Timothy Robinson},
  title        = {Approximate Bayesian Computation for Granular and Molecular Dynamics
                  Simulations},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2016, Lausanne, Switzerland, June 8-10, 2016},
  pages        = {4},
  publisher    = {{ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2929918},
  timestamp    = {Tue, 06 Nov 2018 11:07:28 +0100},
  biburl       = {https://dblp.org/rec/conf/pasc/KulakovaAHPK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/WermelingerHHRK16,
  author       = {Fabian Wermelinger and
                  Babak Hejazialhosseini and
                  Panagiotis E. Hadjidoukas and
                  Diego Rossinelli and
                  Petros Koumoutsakos},
  editor       = {Torsten Hoefler and
                  David E. Keyes and
                  Timothy Robinson},
  title        = {An Efficient Compressible Multicomponent Flow Solver for Heterogeneous
                  {CPU/GPU} Architectures},
  booktitle    = {Proceedings of the Platform for Advanced Scientific Computing Conference,
                  {PASC} 2016, Lausanne, Switzerland, June 8-10, 2016},
  pages        = {8},
  publisher    = {{ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2929914},
  timestamp    = {Tue, 28 Mar 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pasc/WermelingerHHRK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/HejlesenKLW15,
  author       = {Mads M{\o}lholm Hejlesen and
                  Petros Koumoutsakos and
                  Anthony Leonard and
                  Jens Honor{\'{e}} Walther},
  title        = {Iterative Brinkman penalization for remeshed vortex methods},
  journal      = {J. Comput. Phys.},
  volume       = {280},
  pages        = {547--562},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jcp.2014.09.029},
  doi          = {10.1016/J.JCP.2014.09.029},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/HejlesenKLW15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/TaurielloK15,
  author       = {Gerardo Tauriello and
                  Petros Koumoutsakos},
  title        = {A comparative study of penalization and phase field methods for the
                  solution of the diffusion equation in complex geometries},
  journal      = {J. Comput. Phys.},
  volume       = {283},
  pages        = {388--407},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jcp.2014.11.033},
  doi          = {10.1016/J.JCP.2014.11.033},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/TaurielloK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/HadjidoukasAPK15,
  author       = {Panagiotis E. Hadjidoukas and
                  Panagiotis Angelikopoulos and
                  Costas Papadimitriou and
                  Petros Koumoutsakos},
  title        = {{\(\Pi\)}4U: {A} high performance computing framework for Bayesian
                  uncertainty quantification of complex models},
  journal      = {J. Comput. Phys.},
  volume       = {284},
  pages        = {1--21},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jcp.2014.12.006},
  doi          = {10.1016/J.JCP.2014.12.006},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/HadjidoukasAPK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/RossinelliHRGBK15,
  author       = {Diego Rossinelli and
                  Babak Hejazialhosseini and
                  Wim M. van Rees and
                  Mattia Gazzola and
                  Michael Bergdorf and
                  Petros Koumoutsakos},
  title        = {{MRAG-I2D:} Multi-resolution adapted grids for remeshed vortex methods
                  on multicore architectures},
  journal      = {J. Comput. Phys.},
  volume       = {288},
  pages        = {1--18},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jcp.2015.01.035},
  doi          = {10.1016/J.JCP.2015.01.035},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcphy/RossinelliHRGBK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/HadjidoukasAKPK15,
  author       = {Panagiotis E. Hadjidoukas and
                  Panagiotis Angelikopoulos and
                  Lina Kulakova and
                  Costas Papadimitriou and
                  Petros Koumoutsakos},
  editor       = {Jesper Larsson Tr{\"{a}}ff and
                  Sascha Hunold and
                  Francesco Versaci},
  title        = {Exploiting Task-Based Parallelism in Bayesian Uncertainty Quantification},
  booktitle    = {Euro-Par 2015: Parallel Processing - 21st International Conference
                  on Parallel and Distributed Computing, Vienna, Austria, August 24-28,
                  2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9233},
  pages        = {532--544},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-662-48096-0\_41},
  doi          = {10.1007/978-3-662-48096-0\_41},
  timestamp    = {Sun, 12 Nov 2023 02:07:45 +0100},
  biburl       = {https://dblp.org/rec/conf/europar/HadjidoukasAKPK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/parco/HadjidoukasRWSR15,
  author       = {Panagiotis E. Hadjidoukas and
                  Diego Rossinelli and
                  Fabian Wermelinger and
                  Jonas Sukys and
                  Ursula Rasthofer and
                  Christian Conti and
                  Babak Hejazialhosseini and
                  Petros Koumoutsakos},
  editor       = {Gerhard R. Joubert and
                  Hugh Leather and
                  Mark Parsons and
                  Frans J. Peters and
                  Mark Sawyer},
  title        = {High throughput simulations of two-phase flows on Blue Gene/Q},
  booktitle    = {Parallel Computing: On the Road to Exascale, Proceedings of the International
                  Conference on Parallel Computing, ParCo 2015, 1-4 September 2015,
                  Edinburgh, Scotland, {UK}},
  series       = {Advances in Parallel Computing},
  volume       = {27},
  pages        = {767--776},
  publisher    = {{IOS} Press},
  year         = {2015},
  url          = {https://doi.org/10.3233/978-1-61499-621-7-767},
  doi          = {10.3233/978-1-61499-621-7-767},
  timestamp    = {Tue, 22 Jun 2021 13:45:14 +0200},
  biburl       = {https://dblp.org/rec/conf/parco/HadjidoukasRWSR15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/RossinelliTLABH15,
  author       = {Diego Rossinelli and
                  Yu{-}Hang Tang and
                  Kirill Lykov and
                  Dmitry Alexeev and
                  Massimo Bernaschi and
                  Panagiotis E. Hadjidoukas and
                  Mauro Bisson and
                  Wayne Joubert and
                  Christian Conti and
                  George E. Karniadakis and
                  Massimiliano Fatica and
                  Igor Pivkin and
                  Petros Koumoutsakos},
  editor       = {Jackie Kern and
                  Jeffrey S. Vetter},
  title        = {The in-silico lab-on-a-chip: petascale and high-throughput simulations
                  of microfluidics at cell resolution},
  booktitle    = {Proceedings of the International Conference for High Performance Computing,
                  Networking, Storage and Analysis, {SC} 2015, Austin, TX, USA, November
                  15-20, 2015},
  pages        = {2:1--2:12},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2807591.2807677},
  doi          = {10.1145/2807591.2807677},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sc/RossinelliTLABH15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/GazzolaHK14,
  author       = {Mattia Gazzola and
                  Babak Hejazialhosseini and
                  Petros Koumoutsakos},
  title        = {Reinforcement Learning and Wavelet Adapted Vortex Methods for Simulations
                  of Self-propelled Swimmers},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {36},
  number       = {3},
  year         = {2014},
  url          = {https://doi.org/10.1137/130943078},
  doi          = {10.1137/130943078},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/GazzolaHK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/KoumoutsakosF13,
  author       = {Petros Koumoutsakos and
                  Justin Feigelman},
  title        = {Multiscale stochastic simulations of chemical reactions with regulated
                  scale separation},
  journal      = {J. Comput. Phys.},
  volume       = {244},
  pages        = {290--297},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.jcp.2012.11.030},
  doi          = {10.1016/J.JCP.2012.11.030},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/KoumoutsakosF13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/TaurielloK13,
  author       = {Gerardo Tauriello and
                  Petros Koumoutsakos},
  title        = {Coupling Remeshed Particle and Phase Field Methods for the Simulation
                  of Reaction-Diffusion on the Surface and the Interior of Deforming
                  Geometries},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {35},
  number       = {6},
  year         = {2013},
  url          = {https://doi.org/10.1137/130906441},
  doi          = {10.1137/130906441},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/TaurielloK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/parco/ReesRHK13,
  author       = {Wim M. van Rees and
                  Diego Rossinelli and
                  Panagiotis E. Hadjidoukas and
                  Petros Koumoutsakos},
  editor       = {Michael Bader and
                  Arndt Bode and
                  Hans{-}Joachim Bungartz and
                  Michael Gerndt and
                  Gerhard R. Joubert and
                  Frans J. Peters},
  title        = {High performance {CPU/GPU} multiresolution Poisson solver},
  booktitle    = {Parallel Computing: Accelerating Computational Science and Engineering
                  (CSE), Proceedings of the International Conference on Parallel Computing,
                  ParCo 2013, 10-13 September 2013, Garching (near Munich), Germany},
  series       = {Advances in Parallel Computing},
  volume       = {25},
  pages        = {481--490},
  publisher    = {{IOS} Press},
  year         = {2013},
  url          = {https://doi.org/10.3233/978-1-61499-381-0-481},
  doi          = {10.3233/978-1-61499-381-0-481},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/parco/ReesRHK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/RossinelliHHBCBFSAK13,
  author       = {Diego Rossinelli and
                  Babak Hejazialhosseini and
                  Panagiotis E. Hadjidoukas and
                  Costas Bekas and
                  Alessandro Curioni and
                  Adam Bertsch and
                  Scott Futral and
                  Steffen J. Schmidt and
                  Nikolaus A. Adams and
                  Petros Koumoutsakos},
  editor       = {William Gropp and
                  Satoshi Matsuoka},
  title        = {11 PFLOP/s simulations of cloud cavitation collapse},
  booktitle    = {International Conference for High Performance Computing, Networking,
                  Storage and Analysis, SC'13, Denver, CO, {USA} - November 17 - 21,
                  2013},
  pages        = {3:1--3:13},
  publisher    = {{ACM}},
  year         = {2013},
  url          = {https://doi.org/10.1145/2503210.2504565},
  doi          = {10.1145/2503210.2504565},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sc/RossinelliHHBCBFSAK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1304-1903,
  author       = {Mario Paolucci and
                  Donald Kossmann and
                  Rosaria Conte and
                  Paul Lukowicz and
                  Panos Argyrakis and
                  Ann Blandford and
                  Giulia Bonelli and
                  Stuart Anderson and
                  Sara de Freitas and
                  Bruce Edmonds and
                  Nigel Gilbert and
                  Markus H. Gross and
                  J{\"{o}}rn Kohlhammer and
                  Petros Koumoutsakos and
                  Andreas Krause and
                  Bj{\"{o}}rn{-}Ola Linn{\'{e}}r and
                  Philipp Slusallek and
                  Olga Sorkine and
                  Robert W. Sumner and
                  Dirk Helbing},
  title        = {Towards a living earth simulator},
  journal      = {CoRR},
  volume       = {abs/1304.1903},
  year         = {2013},
  url          = {http://arxiv.org/abs/1304.1903},
  eprinttype    = {arXiv},
  eprint       = {1304.1903},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1304-1903.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/ContiRK12,
  author       = {Christian Conti and
                  Diego Rossinelli and
                  Petros Koumoutsakos},
  title        = {{GPU} and {APU} computations of Finite Time Lyapunov Exponent fields},
  journal      = {J. Comput. Phys.},
  volume       = {231},
  number       = {5},
  pages        = {2229--2244},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.jcp.2011.10.032},
  doi          = {10.1016/J.JCP.2011.10.032},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/ContiRK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/WaltherPKK12,
  author       = {Jens H. Walther and
                  Matej Praprotnik and
                  Evangelos M. Kotsalis and
                  Petros Koumoutsakos},
  title        = {Multiscale simulation of water flow past a C\({}_{\mbox{540}}\) fullerene},
  journal      = {J. Comput. Phys.},
  volume       = {231},
  number       = {7},
  pages        = {2677--2681},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.jcp.2011.12.015},
  doi          = {10.1016/J.JCP.2011.12.015},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/WaltherPKK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/HejazialhosseiniRCK12,
  author       = {Babak Hejazialhosseini and
                  Diego Rossinelli and
                  Christian Conti and
                  Petros Koumoutsakos},
  editor       = {Jeffrey K. Hollingsworth},
  title        = {High throughput software for direct numerical simulations of compressible
                  two-phase flows},
  booktitle    = {{SC} Conference on High Performance Computing Networking, Storage
                  and Analysis, {SC} '12, Salt Lake City, UT, {USA} - November 11 -
                  15, 2012},
  pages        = {16},
  publisher    = {{IEEE/ACM}},
  year         = {2012},
  url          = {https://doi.org/10.1109/SC.2012.66},
  doi          = {10.1109/SC.2012.66},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sc/HejazialhosseiniRCK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vecpar/HejazialhosseiniCRK12,
  author       = {Babak Hejazialhosseini and
                  Christian Conti and
                  Diego Rossinelli and
                  Petros Koumoutsakos},
  editor       = {Michel J. Dayd{\'{e}} and
                  Osni Marques and
                  Kengo Nakajima},
  title        = {High Performance {CPU} Kernels for Multiphase Compressible Flows},
  booktitle    = {High Performance Computing for Computational Science - {VECPAR} 2012,
                  10th International Conference, Kobe, Japan, July 17-20, 2012, Revised
                  Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {7851},
  pages        = {216--225},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-38718-0\_22},
  doi          = {10.1007/978-3-642-38718-0\_22},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/vecpar/HejazialhosseiniCRK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/RossinelliHBK11,
  author       = {Diego Rossinelli and
                  Babak Hejazialhosseini and
                  Michael Bergdorf and
                  Petros Koumoutsakos},
  title        = {Wavelet-adaptive solvers on multi-core architectures for the simulation
                  of complex systems},
  journal      = {Concurr. Comput. Pract. Exp.},
  volume       = {23},
  number       = {2},
  pages        = {172--186},
  year         = {2011},
  url          = {https://doi.org/10.1002/cpe.1639},
  doi          = {10.1002/CPE.1639},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/concurrency/RossinelliHBK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/BayatiCK11,
  author       = {Basil Bayati and
                  Philippe Chatelain and
                  Petros Koumoutsakos},
  title        = {Adaptive mesh refinement for stochastic reaction-diffusion processes},
  journal      = {J. Comput. Phys.},
  volume       = {230},
  number       = {1},
  pages        = {13--26},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.jcp.2010.08.035},
  doi          = {10.1016/J.JCP.2010.08.035},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/BayatiCK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/ReesLPK11,
  author       = {Wim M. van Rees and
                  Anthony Leonard and
                  D. I. Pullin and
                  Petros Koumoutsakos},
  title        = {A comparison of vortex and pseudo-spectral methods for the simulation
                  of periodic vortical flows at high Reynolds numbers},
  journal      = {J. Comput. Phys.},
  volume       = {230},
  number       = {8},
  pages        = {2794--2805},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.jcp.2010.11.031},
  doi          = {10.1016/J.JCP.2010.11.031},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/ReesLPK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/GazzolaCRK11,
  author       = {Mattia Gazzola and
                  Philippe Chatelain and
                  Wim M. van Rees and
                  Petros Koumoutsakos},
  title        = {Simulations of single and multiple swimmers with non-divergence free
                  deforming geometries},
  journal      = {J. Comput. Phys.},
  volume       = {230},
  number       = {19},
  pages        = {7093--7114},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.jcp.2011.04.025},
  doi          = {10.1016/J.JCP.2011.04.025},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/GazzolaCRK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/RossinelliHSK11,
  author       = {Diego Rossinelli and
                  Babak Hejazialhosseini and
                  Daniele G. Spampinato and
                  Petros Koumoutsakos},
  title        = {Multicore/Multi-GPU Accelerated Simulations of Multiphase Compressible
                  Flows Using Wavelet Adapted Grids},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {33},
  number       = {2},
  pages        = {512--540},
  year         = {2011},
  url          = {https://doi.org/10.1137/100795930},
  doi          = {10.1137/100795930},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/RossinelliHSK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cma/KotsalisHWK10,
  author       = {Evangelos M. Kotsalis and
                  Itsuo Hanasaki and
                  Jens H. Walther and
                  Petros Koumoutsakos},
  title        = {Non-periodic Molecular Dynamics simulations of coarse grained lipid
                  bilayer in water},
  journal      = {Comput. Math. Appl.},
  volume       = {59},
  number       = {7},
  pages        = {2370--2373},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.camwa.2009.08.054},
  doi          = {10.1016/J.CAMWA.2009.08.054},
  timestamp    = {Thu, 11 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cma/KotsalisHWK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/ChatelainK10,
  author       = {Philippe Chatelain and
                  Petros Koumoutsakos},
  title        = {A Fourier-based elliptic solver for vortical flows with periodic and
                  unbounded directions},
  journal      = {J. Comput. Phys.},
  volume       = {229},
  number       = {7},
  pages        = {2425--2431},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.jcp.2009.12.035},
  doi          = {10.1016/J.JCP.2009.12.035},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/ChatelainK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/RossinelliBCK10,
  author       = {Diego Rossinelli and
                  Michael Bergdorf and
                  Georges{-}Henri Cottet and
                  Petros Koumoutsakos},
  title        = {{GPU} accelerated simulations of bluff body flows using vortex particle
                  methods},
  journal      = {J. Comput. Phys.},
  volume       = {229},
  number       = {9},
  pages        = {3316--3333},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.jcp.2010.01.004},
  doi          = {10.1016/J.JCP.2010.01.004},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/RossinelliBCK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/HejazialhosseiniRBK10,
  author       = {Babak Hejazialhosseini and
                  Diego Rossinelli and
                  Michael Bergdorf and
                  Petros Koumoutsakos},
  title        = {High order finite volume methods on wavelet-adapted grids with local
                  time-stepping on multicore architectures for the simulation of shock-bubble
                  interactions},
  journal      = {J. Comput. Phys.},
  volume       = {229},
  number       = {22},
  pages        = {8364--8383},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.jcp.2010.07.021},
  doi          = {10.1016/J.JCP.2010.07.021},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/HejazialhosseiniRBK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vecpar/ChatelainGKK10,
  author       = {Philippe Chatelain and
                  Mattia Gazzola and
                  Stefan Kern and
                  Petros Koumoutsakos},
  editor       = {Jos{\'{e}} M. Laginha M. Palma and
                  Michel J. Dayd{\'{e}} and
                  Osni Marques and
                  Jo{\~{a}}o Correia Lopes},
  title        = {Optimization of Aircraft Wake Alleviation Schemes through an Evolution
                  Strategy},
  booktitle    = {High Performance Computing for Computational Science - {VECPAR} 2010
                  - 9th International conference, Berkeley, CA, USA, June 22-25, 2010,
                  Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {6449},
  pages        = {210--221},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-3-642-19328-6\_21},
  doi          = {10.1007/978-3-642-19328-6\_21},
  timestamp    = {Mon, 16 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/vecpar/ChatelainGKK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GebackK09,
  author       = {Tobias Geb{\"{a}}ck and
                  Petros Koumoutsakos},
  title        = {Edge detection in microscopy images using curvelets},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-75},
  doi          = {10.1186/1471-2105-10-75},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/GebackK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cphysics/GonnetWK09,
  author       = {Pedro Gonnet and
                  Jens H. Walther and
                  Petros Koumoutsakos},
  title        = {theta-SHAKE: An extension to {SHAKE} for the explicit treatment of
                  angular constraints},
  journal      = {Comput. Phys. Commun.},
  volume       = {180},
  number       = {3},
  pages        = {360--364},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.cpc.2008.10.020},
  doi          = {10.1016/J.CPC.2008.10.020},
  timestamp    = {Fri, 21 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cphysics/GonnetWK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/BayatiCK09,
  author       = {Basil Bayati and
                  Philippe Chatelain and
                  Petros Koumoutsakos},
  title        = {D-leaping: Accelerating stochastic simulation algorithms for reactions
                  with delays},
  journal      = {J. Comput. Phys.},
  volume       = {228},
  number       = {16},
  pages        = {5908--5916},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.jcp.2009.05.004},
  doi          = {10.1016/J.JCP.2009.05.004},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/BayatiCK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GazzolaBBEGK09,
  author       = {Mattia Gazzola and
                  Christoph J. Burckhardt and
                  Basil Bayati and
                  Martin Engelke and
                  Urs F. Greber and
                  Petros Koumoutsakos},
  title        = {A Stochastic Model for Microtubule Motors Describes the \emph{In Vivo}
                  Cytoplasmic Transport of Human Adenovirus},
  journal      = {PLoS Comput. Biol.},
  volume       = {5},
  number       = {12},
  year         = {2009},
  url          = {https://doi.org/10.1371/journal.pcbi.1000623},
  doi          = {10.1371/JOURNAL.PCBI.1000623},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/GazzolaBBEGK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tec/HansenNGK09,
  author       = {Nikolaus Hansen and
                  Andr{\'{e}} S. P. Niederberger and
                  Lino Guzzella and
                  Petros Koumoutsakos},
  title        = {A Method for Handling Uncertainty in Evolutionary Optimization With
                  an Application to Feedback Control of Combustion},
  journal      = {{IEEE} Trans. Evol. Comput.},
  volume       = {13},
  number       = {1},
  pages        = {180--197},
  year         = {2009},
  url          = {https://doi.org/10.1109/TEVC.2008.924423},
  doi          = {10.1109/TEVC.2008.924423},
  timestamp    = {Tue, 12 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tec/HansenNGK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/RossinelliBHK09,
  author       = {Diego Rossinelli and
                  Michael Bergdorf and
                  Babak Hejazialhosseini and
                  Petros Koumoutsakos},
  editor       = {Henk J. Sips and
                  Dick H. J. Epema and
                  Hai{-}Xiang Lin},
  title        = {Wavelet-Based Adaptive Solvers on Multi-core Architectures for the
                  Simulation of Complex Systems},
  booktitle    = {Euro-Par 2009 Parallel Processing, 15th International Euro-Par Conference,
                  Delft, The Netherlands, August 25-28, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5704},
  pages        = {721--734},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-03869-3\_68},
  doi          = {10.1007/978-3-642-03869-3\_68},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/europar/RossinelliBHK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/DupuisCK08,
  author       = {Alexandre Dupuis and
                  Philippe Chatelain and
                  Petros Koumoutsakos},
  title        = {An immersed boundary-lattice-Boltzmann method for the simulation of
                  the flow past an impulsively started cylinder},
  journal      = {J. Comput. Phys.},
  volume       = {227},
  number       = {9},
  pages        = {4486--4498},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jcp.2008.01.009},
  doi          = {10.1016/J.JCP.2008.01.009},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/DupuisCK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/HieberK08,
  author       = {Simone Elke Hieber and
                  Petros Koumoutsakos},
  title        = {An immersed boundary method for smoothed particle hydrodynamics of
                  self-propelled swimmers},
  journal      = {J. Comput. Phys.},
  volume       = {227},
  number       = {19},
  pages        = {8636--8654},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jcp.2008.06.017},
  doi          = {10.1016/J.JCP.2008.06.017},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/HieberK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/Koumoutsakos08,
  author       = {Petros Koumoutsakos},
  title        = {Preface},
  journal      = {J. Comput. Phys.},
  volume       = {227},
  number       = {21},
  pages        = {9005},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jcp.2008.06.025},
  doi          = {10.1016/J.JCP.2008.06.025},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/Koumoutsakos08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/HieberK08a,
  author       = {Simone Elke Hieber and
                  Petros Koumoutsakos},
  title        = {A Lagrangian particle method for the simulation of linear and nonlinear
                  elastic models of soft tissue},
  journal      = {J. Comput. Phys.},
  volume       = {227},
  number       = {21},
  pages        = {9195--9215},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jcp.2008.05.016},
  doi          = {10.1016/J.JCP.2008.05.016},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/HieberK08a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vc/RossinelliK08,
  author       = {Diego Rossinelli and
                  Petros Koumoutsakos},
  title        = {Vortex methods for incompressible flow simulations on the {GPU}},
  journal      = {Vis. Comput.},
  volume       = {24},
  number       = {7-9},
  pages        = {699--708},
  year         = {2008},
  url          = {https://doi.org/10.1007/s00371-008-0250-z},
  doi          = {10.1007/S00371-008-0250-Z},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/vc/RossinelliK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/MildeBK08,
  author       = {Florian Milde and
                  Michael Bergdorf and
                  Petros Koumoutsakos},
  editor       = {Marian Bubak and
                  G. Dick van Albada and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {A Hybrid Model of Sprouting Angiogenesis},
  booktitle    = {Computational Science - {ICCS} 2008, 8th International Conference,
                  Krak{\'{o}}w, Poland, June 23-25, 2008, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5102},
  pages        = {167--176},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69387-1\_19},
  doi          = {10.1007/978-3-540-69387-1\_19},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/MildeBK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/KotsalisK08,
  author       = {Evangelos M. Kotsalis and
                  Petros Koumoutsakos},
  editor       = {Marian Bubak and
                  G. Dick van Albada and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {A Control Algorithm for Multiscale Simulations of Liquid Water},
  booktitle    = {Computational Science - {ICCS} 2008, 8th International Conference,
                  Krak{\'{o}}w, Poland, June 23-25, 2008, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5102},
  pages        = {234--241},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69387-1\_26},
  doi          = {10.1007/978-3-540-69387-1\_26},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/KotsalisK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/siggraph/KoumoutsakosCR08,
  author       = {Petros Koumoutsakos and
                  Georges{-}Henri Cottet and
                  Diego Rossinelli},
  title        = {Flow simulations using particles: bridging computer graphics and {CFD}},
  booktitle    = {International Conference on Computer Graphics and Interactive Techniques,
                  {SIGGRAPH} 2008, Los Angeles, California, USA, August 11-15, 2008,
                  Classes},
  pages        = {25:1--25:73},
  publisher    = {{ACM}},
  year         = {2008},
  url          = {https://doi.org/10.1145/1401132.1401166},
  doi          = {10.1145/1401132.1401166},
  timestamp    = {Fri, 12 Mar 2021 10:04:42 +0100},
  biburl       = {https://dblp.org/rec/conf/siggraph/KoumoutsakosCR08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/siggraph/Koumoutsakos08,
  author       = {Petros Koumoutsakos},
  editor       = {Jill Smolin},
  title        = {The secret life of vortices},
  booktitle    = {International Conference on Computer Graphics and Interactive Techniques,
                  {SIGGRAPH} 2008, Los Angeles, California, USA, August 11-15, 2008,
                  Computer Animation Festival},
  pages        = {98},
  publisher    = {{ACM}},
  year         = {2008},
  url          = {https://doi.org/10.1145/1400468.1400539},
  doi          = {10.1145/1400468.1400539},
  timestamp    = {Fri, 12 Mar 2021 10:05:03 +0100},
  biburl       = {https://dblp.org/rec/conf/siggraph/Koumoutsakos08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vecpar/ChatelainCBRAK08,
  author       = {Philippe Chatelain and
                  Alessandro Curioni and
                  Michael Bergdorf and
                  Diego Rossinelli and
                  Wanda Andreoni and
                  Petros Koumoutsakos},
  editor       = {Jos{\'{e}} M. Laginha M. Palma and
                  Patrick Amestoy and
                  Michel J. Dayd{\'{e}} and
                  Marta Mattoso and
                  Jo{\~{a}}o Correia Lopes},
  title        = {Vortex Methods for Massively Parallel Computer Architectures},
  booktitle    = {High Performance Computing for Computational Science - {VECPAR} 2008,
                  8th International Conference, Toulouse, France, June 24-27, 2008.
                  Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {5336},
  pages        = {479--489},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-92859-1\_42},
  doi          = {10.1007/978-3-540-92859-1\_42},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/vecpar/ChatelainCBRAK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ercim/Koumoutsakos08,
  author       = {Petros Koumoutsakos},
  title        = {Fluids and Supercomputers: The Billion Particle Era},
  journal      = {{ERCIM} News},
  volume       = {2008},
  number       = {74},
  year         = {2008},
  url          = {http://ercim-news.ercim.eu/fluids-and-supercomputers-the-billion-particle-era},
  timestamp    = {Wed, 22 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ercim/Koumoutsakos08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/AltenhoffWK07,
  author       = {Adrian M. Altenhoff and
                  Jens H. Walther and
                  Petros Koumoutsakos},
  title        = {A stochastic boundary forcing for dissipative particle dynamics},
  journal      = {J. Comput. Phys.},
  volume       = {225},
  number       = {1},
  pages        = {1125--1136},
  year         = {2007},
  url          = {https://doi.org/10.1016/j.jcp.2007.01.015},
  doi          = {10.1016/J.JCP.2007.01.015},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/AltenhoffWK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/MorraCTK07,
  author       = {Gabriele Morra and
                  Philippe Chatelain and
                  Paul J. Tackley and
                  Petros Koumoutsakos},
  editor       = {Yong Shi and
                  G. Dick van Albada and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Large Scale Three-Dimensional Boundary Element Simulation of Subduction},
  booktitle    = {Computational Science - {ICCS} 2007, 7th International Conference,
                  Beijing, China, May 27 - 30, 2007, Proceedings, Part {III}},
  series       = {Lecture Notes in Computer Science},
  volume       = {4489},
  pages        = {1122--1129},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-72588-6\_178},
  doi          = {10.1007/978-3-540-72588-6\_178},
  timestamp    = {Tue, 08 Nov 2022 08:34:35 +0100},
  biburl       = {https://dblp.org/rec/conf/iccS/MorraCTK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcphy/SbalzariniWBHKK06,
  author       = {Ivo F. Sbalzarini and
                  Jens H. Walther and
                  Michael Bergdorf and
                  Simone Elke Hieber and
                  Evangelos M. Kotsalis and
                  Petros Koumoutsakos},
  title        = {{PPM} - {A} highly efficient parallel particle-mesh library for the
                  simulation of continuum systems},
  journal      = {J. Comput. Phys.},
  volume       = {215},
  number       = {2},
  pages        = {566--588},
  year         = {2006},
  url          = {https://doi.org/10.1016/j.jcp.2005.11.017},
  doi          = {10.1016/J.JCP.2005.11.017},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcphy/SbalzariniWBHKK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mmas/BergdorfK06,
  author       = {Michael Bergdorf and
                  Petros Koumoutsakos},
  title        = {A Lagrangian Particle-Wavelet Method},
  journal      = {Multiscale Model. Simul.},
  volume       = {5},
  number       = {3},
  pages        = {980--995},
  year         = {2006},
  url          = {https://doi.org/10.1137/060652877},
  doi          = {10.1137/060652877},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mmas/BergdorfK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/SbalzariniWPCBHKK06,
  author       = {Ivo F. Sbalzarini and
                  Jens H. Walther and
                  B. Polasek and
                  Philippe Chatelain and
                  Michael Bergdorf and
                  Simone Elke Hieber and
                  Evangelos M. Kotsalis and
                  Petros Koumoutsakos},
  editor       = {Wolfgang E. Nagel and
                  Wolfgang V. Walter and
                  Wolfgang Lehner},
  title        = {A Software Framework for the Portable Parallelization of Particle-Mesh
                  Simulations},
  booktitle    = {Euro-Par 2006, Parallel Processing, 12th International Euro-Par Conference,
                  Dresden, Germany, August 28 - September 1, 2006, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4128},
  pages        = {730--739},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11823285\_76},
  doi          = {10.1007/11823285\_76},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/europar/SbalzariniWPCBHKK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsn/HansenGAK06,
  author       = {Nikolaus Hansen and
                  Fabian Gemperle and
                  Anne Auger and
                  Petros Koumoutsakos},
  editor       = {Thomas Philip Runarsson and
                  Hans{-}Georg Beyer and
                  Edmund K. Burke and
                  Juan Juli{\'{a}}n Merelo Guerv{\'{o}}s and
                  L. Darrell Whitley and
                  Xin Yao},
  title        = {When Do Heavy-Tail Distributions Help?},
  booktitle    = {Parallel Problem Solving from Nature - {PPSN} IX, 9th International
                  Conference, Reykjavik, Iceland, September 9-13, 2006, Procedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4193},
  pages        = {62--71},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11844297\_7},
  doi          = {10.1007/11844297\_7},
  timestamp    = {Sun, 25 Jul 2021 11:46:24 +0200},
  biburl       = {https://dblp.org/rec/conf/ppsn/HansenGAK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsn/KernHK06,
  author       = {Stefan Kern and
                  Nikolaus Hansen and
                  Petros Koumoutsakos},
  editor       = {Thomas Philip Runarsson and
                  Hans{-}Georg Beyer and
                  Edmund K. Burke and
                  Juan Juli{\'{a}}n Merelo Guerv{\'{o}}s and
                  L. Darrell Whitley and
                  Xin Yao},
  title        = {Local Meta-models for Optimization Using Evolution Strategies},
  booktitle    = {Parallel Problem Solving from Nature - {PPSN} IX, 9th International
                  Conference, Reykjavik, Iceland, September 9-13, 2006, Procedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4193},
  pages        = {939--948},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11844297\_95},
  doi          = {10.1007/11844297\_95},
  timestamp    = {Wed, 17 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ppsn/KernHK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vecpar/BergdorfK06,
  author       = {Michael Bergdorf and
                  Petros Koumoutsakos},
  editor       = {Michel J. Dayd{\'{e}} and
                  Jos{\'{e}} M. Laginha M. Palma and
                  Alvaro L. G. A. Coutinho and
                  Esther Pacitti and
                  Jo{\~{a}}o Correia Lopes},
  title        = {Multiresolution Simulations Using Particles},
  booktitle    = {High Performance Computing for Computational Science - {VECPAR} 2006,
                  7th International Conference, Rio de Janeiro, Brazil, June 10-13,
                  2006, Revised Selected and Invited Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {4395},
  pages        = {391--402},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/978-3-540-71351-7\_30},
  doi          = {10.1007/978-3-540-71351-7\_30},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/vecpar/BergdorfK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mmas/HouK05,
  author       = {Thomas Yizhao Hou and
                  Petros Koumoutsakos},
  title        = {Special Section on Multiscale Modeling in Materials and Life Sciences},
  journal      = {Multiscale Model. Simul.},
  volume       = {4},
  number       = {1},
  pages        = {213--214},
  year         = {2005},
  url          = {https://doi.org/10.1137/MMSUBT000004000001000213000001},
  doi          = {10.1137/MMSUBT000004000001000213000001},
  timestamp    = {Thu, 11 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mmas/HouK05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mmas/BergdorfCK05,
  author       = {Michael Bergdorf and
                  Georges{-}Henri Cottet and
                  Petros Koumoutsakos},
  title        = {Multilevel Adaptive Particle Methods for Convection-Diffusion Equations},
  journal      = {Multiscale Model. Simul.},
  volume       = {4},
  number       = {1},
  pages        = {328--357},
  year         = {2005},
  url          = {https://doi.org/10.1137/040602882},
  doi          = {10.1137/040602882},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mmas/BergdorfCK05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tsmc/BucheSK05,
  author       = {Dirk B{\"{u}}che and
                  Nicol N. Schraudolph and
                  Petros Koumoutsakos},
  title        = {Accelerating evolutionary algorithms with Gaussian process fitness
                  function models},
  journal      = {{IEEE} Trans. Syst. Man Cybern. Part {C}},
  volume       = {35},
  number       = {2},
  pages        = {183--194},
  year         = {2005},
  url          = {https://doi.org/10.1109/TSMCC.2004.841917},
  doi          = {10.1109/TSMCC.2004.841917},
  timestamp    = {Thu, 21 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tsmc/BucheSK05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/KernMHBOK04,
  author       = {Stefan Kern and
                  Sibylle D. M{\"{u}}ller and
                  Nikolaus Hansen and
                  Dirk B{\"{u}}che and
                  Jiri Ocenasek and
                  Petros Koumoutsakos},
  title        = {Learning probability distributions in continuous evolutionary algorithms
                  - a comparative review},
  journal      = {Nat. Comput.},
  volume       = {3},
  number       = {1},
  pages        = {77--112},
  year         = {2004},
  url          = {https://doi.org/10.1023/B:NACO.0000023416.59689.4e},
  doi          = {10.1023/B:NACO.0000023416.59689.4E},
  timestamp    = {Thu, 02 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/KernMHBOK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/KernMHBOK04a,
  author       = {Stefan Kern and
                  Sibylle D. M{\"{u}}ller and
                  Nikolaus Hansen and
                  Dirk B{\"{u}}che and
                  Jiri Ocenasek and
                  Petros Koumoutsakos},
  title        = {Learning Probability Distributions in Continuous Evolutionary Algorithms
                  - a Comparative Review},
  journal      = {Nat. Comput.},
  volume       = {3},
  number       = {3},
  pages        = {355--356},
  year         = {2004},
  url          = {https://doi.org/10.1023/B:NACO.0000036904.41423.1c},
  doi          = {10.1023/B:NACO.0000036904.41423.1C},
  timestamp    = {Thu, 02 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/KernMHBOK04a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/MilanoKS04,
  author       = {Michele Milano and
                  Petros Koumoutsakos and
                  J{\"{u}}rgen Schmidhuber},
  title        = {Self-organizing nets for optimization},
  journal      = {{IEEE} Trans. Neural Networks},
  volume       = {15},
  number       = {3},
  pages        = {758--765},
  year         = {2004},
  url          = {https://doi.org/10.1109/TNN.2004.826132},
  doi          = {10.1109/TNN.2004.826132},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tnn/MilanoKS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsn/OcenasekKHK04,
  author       = {Jiri Ocenasek and
                  Stefan Kern and
                  Nikolaus Hansen and
                  Petros Koumoutsakos},
  editor       = {Xin Yao and
                  Edmund K. Burke and
                  Jos{\'{e}} Antonio Lozano and
                  Jim Smith and
                  Juan Juli{\'{a}}n Merelo Guerv{\'{o}}s and
                  John A. Bullinaria and
                  Jonathan E. Rowe and
                  Peter Ti{\~{n}}o and
                  Ata Kab{\'{a}}n and
                  Hans{-}Paul Schwefel},
  title        = {A Mixed Bayesian Optimization Algorithm with Variance Adaptation},
  booktitle    = {Parallel Problem Solving from Nature - {PPSN} VIII, 8th International
                  Conference, Birmingham, UK, September 18-22, 2004, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3242},
  pages        = {352--361},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-30217-9\_36},
  doi          = {10.1007/978-3-540-30217-9\_36},
  timestamp    = {Wed, 28 Jun 2023 16:19:43 +0200},
  biburl       = {https://dblp.org/rec/conf/ppsn/OcenasekKHK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ec/HansenMK03,
  author       = {Nikolaus Hansen and
                  Sibylle D. M{\"{u}}ller and
                  Petros Koumoutsakos},
  title        = {Reducing the Time Complexity of the Derandomized Evolution Strategy
                  with Covariance Matrix Adaptation {(CMA-ES)}},
  journal      = {Evol. Comput.},
  volume       = {11},
  number       = {1},
  pages        = {1--18},
  year         = {2003},
  url          = {https://doi.org/10.1162/106365603321828970},
  doi          = {10.1162/106365603321828970},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ec/HansenMK03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emo/BucheMK03,
  author       = {Dirk B{\"{u}}che and
                  Sibylle D. M{\"{u}}ller and
                  Petros Koumoutsakos},
  editor       = {Carlos M. Fonseca and
                  Peter J. Fleming and
                  Eckart Zitzler and
                  Kalyanmoy Deb and
                  Lothar Thiele},
  title        = {Self-Adaptation for Multi-objective Evolutionary Algorithms},
  booktitle    = {Evolutionary Multi-Criterion Optimization, Second International Conference,
                  {EMO} 2003, Faro, Portugal, April 8-11, 2003, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2632},
  pages        = {267--281},
  publisher    = {Springer},
  year         = {2003},
  url          = {https://doi.org/10.1007/3-540-36970-8\_19},
  doi          = {10.1007/3-540-36970-8\_19},
  timestamp    = {Tue, 14 May 2019 10:00:47 +0200},
  biburl       = {https://dblp.org/rec/conf/emo/BucheMK03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tec/MullerMAK02,
  author       = {Sibylle D. M{\"{u}}ller and
                  Jarno Marchetto and
                  Stefano Airaghi and
                  Petros Koumoutsakos},
  title        = {Optimization based on bacterial chemotaxis},
  journal      = {{IEEE} Trans. Evol. Comput.},
  volume       = {6},
  number       = {1},
  pages        = {16--29},
  year         = {2002},
  url          = {https://doi.org/10.1109/4235.985689},
  doi          = {10.1109/4235.985689},
  timestamp    = {Tue, 12 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tec/MullerMAK02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/MullerSK02,
  author       = {Sibylle D. M{\"{u}}ller and
                  Nicol N. Schraudolph and
                  Petros Koumoutsakos},
  title        = {Step size adaptation in evolution strategies using reinforcement learning},
  booktitle    = {Proceedings of the 2002 Congress on Evolutionary Computation, {CEC}
                  2002, Honolulu, HI, USA, May 12-17, 2002},
  pages        = {151--156},
  publisher    = {{IEEE}},
  year         = {2002},
  url          = {https://doi.org/10.1109/CEC.2002.1006225},
  doi          = {10.1109/CEC.2002.1006225},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cec/MullerSK02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsn/BucheGSK02,
  author       = {Dirk B{\"{u}}che and
                  Gianfranco Guidati and
                  Peter Stoll and
                  Petros Koumoutsakos},
  editor       = {Juan Juli{\'{a}}n Merelo Guerv{\'{o}}s and
                  Panagiotis Adamidis and
                  Hans{-}Georg Beyer and
                  Jos{\'{e}} Luis Fern{\'{a}}ndez{-}Villaca{\~{n}}as Mart{\'{\i}}n and
                  Hans{-}Paul Schwefel},
  title        = {Self-organizing Maps for Pareto Optimization of Airfoils},
  booktitle    = {Parallel Problem Solving from Nature - {PPSN} VII, 7th International
                  Conference, Granada, Spain, September 7-11, 2002, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2439},
  pages        = {122--131},
  publisher    = {Springer},
  year         = {2002},
  url          = {https://doi.org/10.1007/3-540-45712-7\_12},
  doi          = {10.1007/3-540-45712-7\_12},
  timestamp    = {Sun, 25 Jul 2021 11:46:24 +0200},
  biburl       = {https://dblp.org/rec/conf/ppsn/BucheGSK02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsn/MullerHK02,
  author       = {Sibylle D. M{\"{u}}ller and
                  Nikolaus Hansen and
                  Petros Koumoutsakos},
  editor       = {Juan Juli{\'{a}}n Merelo Guerv{\'{o}}s and
                  Panagiotis Adamidis and
                  Hans{-}Georg Beyer and
                  Jos{\'{e}} Luis Fern{\'{a}}ndez{-}Villaca{\~{n}}as Mart{\'{\i}}n and
                  Hans{-}Paul Schwefel},
  title        = {Increasing the Serial and the Parallel Performance of the CMA-Evolution
                  Strategy with Large Populations},
  booktitle    = {Parallel Problem Solving from Nature - {PPSN} VII, 7th International
                  Conference, Granada, Spain, September 7-11, 2002, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2439},
  pages        = {422--431},
  publisher    = {Springer},
  year         = {2002},
  url          = {https://doi.org/10.1007/3-540-45712-7\_41},
  doi          = {10.1007/3-540-45712-7\_41},
  timestamp    = {Wed, 17 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ppsn/MullerHK02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/MullerSWK01,
  author       = {Sibylle D. M{\"{u}}ller and
                  Ivo F. Sbalzarini and
                  Jens H. Walther and
                  Petros Koumoutsakos},
  title        = {Evolution strategies for the optimization of microdevices},
  booktitle    = {Proceedings of the 2001 Congress on Evolutionary Computation, {CEC}
                  2001, COEX, Seoul, Korea, May 27-30, 2001},
  pages        = {302--309},
  publisher    = {{IEEE}},
  year         = {2001},
  url          = {https://doi.org/10.1109/CEC.2001.934405},
  doi          = {10.1109/CEC.2001.934405},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cec/MullerSWK01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emo/SbalzariniMK01,
  author       = {Ivo F. Sbalzarini and
                  Sibylle D. M{\"{u}}ller and
                  Petros Koumoutsakos},
  editor       = {Eckart Zitzler and
                  Kalyanmoy Deb and
                  Lothar Thiele and
                  Carlos A. Coello Coello and
                  David Corne},
  title        = {Microchannel Optimization Using Multiobjective Evolution Strategies},
  booktitle    = {Evolutionary Multi-Criterion Optimization, First International Conference,
                  {EMO} 2001, Zurich, Switzerland, March 7-9, 2001, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1993},
  pages        = {516--530},
  publisher    = {Springer},
  year         = {2001},
  url          = {https://doi.org/10.1007/3-540-44719-9\_36},
  doi          = {10.1007/3-540-44719-9\_36},
  timestamp    = {Tue, 14 May 2019 10:00:47 +0200},
  biburl       = {https://dblp.org/rec/conf/emo/SbalzariniMK01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icann/MilanoSK01,
  author       = {Michele Milano and
                  J{\"{u}}rgen Schmidhuber and
                  Petros Koumoutsakos},
  editor       = {Georg Dorffner and
                  Horst Bischof and
                  Kurt Hornik},
  title        = {Active Learning with Adaptive Grids},
  booktitle    = {Artificial Neural Networks - {ICANN} 2001, International Conference
                  Vienna, Austria, August 21-25, 2001 Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2130},
  pages        = {436--442},
  publisher    = {Springer},
  year         = {2001},
  url          = {https://doi.org/10.1007/3-540-44668-0\_61},
  doi          = {10.1007/3-540-44668-0\_61},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icann/MilanoSK01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/daglib/0017430,
  author       = {Georges{-}Henri Cottet and
                  Petros Koumoutsakos},
  title        = {Vortex methods - theory and practice},
  publisher    = {Cambridge University Press},
  year         = {2000},
  isbn         = {978-0-521-62186-1},
  timestamp    = {Mon, 18 Apr 2011 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/books/daglib/0017430.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/MilanoKGS00,
  author       = {Michele Milano and
                  Petros Koumoutsakos and
                  Xavier Giannakopoulos and
                  J{\"{u}}rgen Schmidhuber},
  editor       = {Ali M. S. Zalzala},
  title        = {Evolving strategies for active flow control},
  booktitle    = {Proceedings of the 2000 Congress on Evolutionary Computation, {CEC}
                  2000, La Jolla, CA, USA, July 16-19, 2000},
  pages        = {212--218},
  publisher    = {{IEEE}},
  year         = {2000},
  url          = {https://doi.org/10.1109/CEC.2000.870297},
  doi          = {10.1109/CEC.2000.870297},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cec/MilanoKGS00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eh/MilanoK00,
  author       = {Michele Milano and
                  Petros Koumoutsakos},
  title        = {A Clustering Genetic Algorithm for Actuator Optimization in Flow Control},
  booktitle    = {2nd {NASA} / DoD Workshop on Evolvable Hardware {(EH} 2000), 13-15
                  July 2000, Palo Alto, CA, {USA}},
  pages        = {263--270},
  publisher    = {{IEEE} Computer Society},
  year         = {2000},
  url          = {https://doi.org/10.1109/EH.2000.869364},
  doi          = {10.1109/EH.2000.869364},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/eh/MilanoK00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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