Stop the war!Остановите войну!
for scientists:
default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDBibTeX records: Stefano Lonardi
@inproceedings{DBLP:conf/bcb/ChakravartyLL23,
author = {Sakshar Chakravarty and
Glennis Logsdon and
Stefano Lonardi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {RAmbler: de novo genome assembly of complex repetitive regions},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {13:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612971},
doi = {10.1145/3584371.3612971},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChakravartyLL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaisyaL21,
author = {Dipankar Ranjan Baisya and
Stefano Lonardi},
title = {Prediction of histone post-translational modifications using deep
learning},
journal = {Bioinform.},
volume = {36},
number = {24},
pages = {5610--5617},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btaa1075},
doi = {10.1093/BIOINFORMATICS/BTAA1075},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaisyaL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiangL21,
author = {Qihua Liang and
Stefano Lonardi},
title = {Reference-agnostic representation and visualization of pan-genomes},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {502},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04424-w},
doi = {10.1186/S12859-021-04424-W},
timestamp = {Wed, 03 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiangL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HasanL20,
author = {Md. Abid Hasan and
Stefano Lonardi},
title = {DeeplyEssential: a deep neural network for predicting essential genes
in microbes},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {14},
pages = {367},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03688-y},
doi = {10.1186/S12859-020-03688-Y},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HasanL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Pan0L20,
author = {Weihua Pan and
Tao Jiang and
Stefano Lonardi},
title = {{OMGS:} Optical Map-Based Genome Scaffolding},
journal = {J. Comput. Biol.},
volume = {27},
number = {4},
pages = {519--533},
year = {2020},
url = {https://doi.org/10.1089/cmb.2019.0310},
doi = {10.1089/CMB.2019.0310},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/Pan0L20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PanL19,
author = {Weihua Pan and
Stefano Lonardi},
title = {Accurate detection of chimeric contigs via Bionano optical maps},
journal = {Bioinform.},
volume = {35},
number = {10},
pages = {1760--1762},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/bty850},
doi = {10.1093/BIOINFORMATICS/BTY850},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PanL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArdakanyAL19,
author = {Abbas Roayaei Ardakany and
Ferhat Ay and
Stefano Lonardi},
title = {Selfish: discovery of differential chromatin interactions via a self-similarity
measure},
journal = {Bioinform.},
volume = {35},
number = {14},
pages = {i145--i153},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/btz362},
doi = {10.1093/BIOINFORMATICS/BTZ362},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArdakanyAL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PanJL19,
author = {Weihua Pan and
Tao Jiang and
Stefano Lonardi},
editor = {Lenore J. Cowen},
title = {{OMGS:} Optical Map-Based Genome Scaffolding},
booktitle = {Research in Computational Molecular Biology - 23rd Annual International
Conference, {RECOMB} 2019, Washington, DC, USA, May 5-8, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11467},
pages = {190--207},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-17083-7\_12},
doi = {10.1007/978-3-030-17083-7\_12},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/PanJL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PanWAJL18,
author = {Weihua Pan and
Steve Wanamaker and
Audrey M. V. Ah{-}Fong and
Howard S. Judelson and
Stefano Lonardi},
title = {Novo{\&}Stitch: accurate reconciliation of genome assemblies via
optical maps},
journal = {Bioinform.},
volume = {34},
number = {13},
pages = {i43--i51},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/bty255},
doi = {10.1093/BIOINFORMATICS/BTY255},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PanWAJL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HasanL18,
author = {Md. Abid Hasan and
Stefano Lonardi},
editor = {Mathieu Blanchette and
A{\"{\i}}da Ouangraoua},
title = {mClass: Cancer Type Classification with Somatic Point Mutation Data},
booktitle = {Comparative Genomics - 16th International Conference, {RECOMB-CG}
2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11183},
pages = {131--145},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-00834-5\_7},
doi = {10.1007/978-3-030-00834-5\_7},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HasanL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/PolishkoHPBRL17,
author = {Anton Polishko and
Md. Abid Hasan and
Weihua Pan and
Evelien M. Bunnik and
Karine G. Le Roch and
Stefano Lonardi},
editor = {Russell Schwartz and
Knut Reinert},
title = {ThIEF: Finding Genome-wide Trajectories of Epigenetics Marks},
booktitle = {17th International Workshop on Algorithms in Bioinformatics, {WABI}
2017, August 21-23, 2017, Boston, MA, {USA}},
series = {LIPIcs},
volume = {88},
pages = {19:1--19:16},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2017},
url = {https://doi.org/10.4230/LIPIcs.WABI.2017.19},
doi = {10.4230/LIPICS.WABI.2017.19},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/PolishkoHPBRL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/ArdakanyL17,
author = {Abbas Roayaei Ardakany and
Stefano Lonardi},
editor = {Russell Schwartz and
Knut Reinert},
title = {Efficient and Accurate Detection of Topologically Associating Domains
from Contact Maps},
booktitle = {17th International Workshop on Algorithms in Bioinformatics, {WABI}
2017, August 21-23, 2017, Boston, MA, {USA}},
series = {LIPIcs},
volume = {88},
pages = {22:1--22:11},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2017},
url = {https://doi.org/10.4230/LIPIcs.WABI.2017.22},
doi = {10.4230/LIPICS.WABI.2017.22},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/ArdakanyL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarrisOL16,
author = {Elena Yavorska Harris and
Rachid Ounit and
Stefano Lonardi},
title = {BRAT-nova: fast and accurate mapping of bisulfite-treated reads},
journal = {Bioinform.},
volume = {32},
number = {17},
pages = {2696--2698},
year = {2016},
url = {https://doi.org/10.1093/bioinformatics/btw226},
doi = {10.1093/BIOINFORMATICS/BTW226},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarrisOL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OunitL16,
author = {Rachid Ounit and
Stefano Lonardi},
title = {Higher classification sensitivity of short metagenomic reads with
CLARK-\emph{S}},
journal = {Bioinform.},
volume = {32},
number = {24},
pages = {3823--3825},
year = {2016},
url = {https://doi.org/10.1093/bioinformatics/btw542},
doi = {10.1093/BIOINFORMATICS/BTW542},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OunitL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HahnLOLM16,
author = {Lars Hahn and
Chris{-}Andr{\'{e}} Leimeister and
Rachid Ounit and
Stefano Lonardi and
Burkhard Morgenstern},
title = {rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping
and Alignment-Free Sequence Comparison},
journal = {PLoS Comput. Biol.},
volume = {12},
number = {10},
year = {2016},
url = {https://doi.org/10.1371/journal.pcbi.1005107},
doi = {10.1371/JOURNAL.PCBI.1005107},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HahnLOLM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MirebrahimCL15,
author = {Seyed Hamid Mirebrahim and
Timothy J. Close and
Stefano Lonardi},
title = {\emph{De novo} meta-assembly of ultra-deep sequencing data},
journal = {Bioinform.},
volume = {31},
number = {12},
pages = {9--16},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv226},
doi = {10.1093/BIOINFORMATICS/BTV226},
timestamp = {Tue, 24 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MirebrahimCL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LonardiMWACDC15,
author = {Stefano Lonardi and
Seyed Hamid Mirebrahim and
Steve Wanamaker and
Matthew Alpert and
Gianfranco Ciardo and
Denisa Duma and
Timothy J. Close},
title = {When less is more: 'slicing' sequencing data improves read decoding
accuracy and \emph{de novo} assembly quality},
journal = {Bioinform.},
volume = {31},
number = {18},
pages = {2972--2980},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv311},
doi = {10.1093/BIOINFORMATICS/BTV311},
timestamp = {Tue, 24 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LonardiMWACDC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/0001RHELK15,
author = {Bing Hu and
Thanawin Rakthanmanon and
Yuan Hao and
Scott Evans and
Stefano Lonardi and
Eamonn J. Keogh},
title = {Using the minimum description length to discover the intrinsic cardinality
and dimensionality of time series},
journal = {Data Min. Knowl. Discov.},
volume = {29},
number = {2},
pages = {358--399},
year = {2015},
url = {https://doi.org/10.1007/s10618-014-0345-2},
doi = {10.1007/S10618-014-0345-2},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/datamine/0001RHELK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FernandezVLN15,
author = {Edward B. Fernandez and
Jason R. Villarreal and
Stefano Lonardi and
Walid A. Najjar},
title = {{FHAST:} FPGA-Based Acceleration of Bowtie in Hardware},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {5},
pages = {973--981},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2015.2405333},
doi = {10.1109/TCBB.2015.2405333},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/FernandezVLN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DumaCBCCL15,
author = {Denise Duma and
Francesca Cordero and
Marco Beccuti and
Gianfranco Ciardo and
Timothy J. Close and
Stefano Lonardi},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Scrible: Ultra-Accurate Error-Correction of Pooled Sequenced Reads},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {162--174},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_12},
doi = {10.1007/978-3-662-48221-6\_12},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/DumaCBCCL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/OunitL15,
author = {Rachid Ounit and
Stefano Lonardi},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Higher Classification Accuracy of Short Metagenomic Reads by Discriminative
Spaced k-mers},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {286--295},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_21},
doi = {10.1007/978-3-662-48221-6\_21},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/OunitL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PolishkoBRL14,
author = {Anton Polishko and
Evelien M. Bunnik and
Karine G. Le Roch and
Stefano Lonardi},
title = {PuFFIN - a parameter-free method to build nucleosome maps from paired-end
reads},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-9}},
pages = {S11},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S9-S11},
doi = {10.1186/1471-2105-15-S9-S11},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PolishkoBRL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/ChenLZ14,
author = {Haifen Chen and
Stefano Lonardi and
Jie Zheng},
title = {Deciphering histone code of transcriptional regulation in malaria
parasites by large-scale data mining},
journal = {Comput. Biol. Chem.},
volume = {50},
pages = {3--10},
year = {2014},
url = {https://doi.org/10.1016/j.compbiolchem.2014.01.002},
doi = {10.1016/J.COMPBIOLCHEM.2014.01.002},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/candc/ChenLZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OunitCWL14,
author = {Rachid Ounit and
Timothy J. Close and
Steve Wanamaker and
Stefano Lonardi},
editor = {Pierre Baldi and
Wei Wang},
title = {CLARK, accurate and efficient classification of {DNA} sequences},
booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational
Biology, and Health Informatics, {BCB} '14, Newport Beach, California,
USA, September 20-23, 2014},
pages = {602},
publisher = {{ACM}},
year = {2014},
url = {https://doi.org/10.1145/2649387.2662449},
doi = {10.1145/2649387.2662449},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OunitCWL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MirebrahimCL14,
author = {Seyed Hamid Mirebrahim and
Timothy J. Close and
Stefano Lonardi},
editor = {Pierre Baldi and
Wei Wang},
title = {De novo assembly of ultra-deep sequencing data},
booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational
Biology, and Health Informatics, {BCB} '14, Newport Beach, California,
USA, September 20-23, 2014},
pages = {609},
publisher = {{ACM}},
year = {2014},
url = {https://doi.org/10.1145/2649387.2660799},
doi = {10.1145/2649387.2660799},
timestamp = {Tue, 24 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MirebrahimCL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LonardiDACBBWCAMWRBLC13,
author = {Stefano Lonardi and
Denisa Duma and
Matthew Alpert and
Francesca Cordero and
Marco Beccuti and
Prasanna R. Bhat and
Yonghui Wu and
Gianfranco Ciardo and
Burair Alsaihati and
Yaqin Ma and
Steve Wanamaker and
Josh Resnik and
Serdar Bozdag and
Ming{-}Cheng Luo and
Timothy J. Close},
title = {Combinatorial Pooling Enables Selective Sequencing of the Barley Gene
Space},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {4},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1003010},
doi = {10.1371/JOURNAL.PCBI.1003010},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/LonardiDACBBWCAMWRBLC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BozdagCL13,
author = {Serdar Bozdag and
Timothy J. Close and
Stefano Lonardi},
title = {A Graph-Theoretical Approach to the Selection of the Minimum Tiling
Path from a Physical Map},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {10},
number = {2},
pages = {352--360},
year = {2013},
url = {https://doi.org/10.1109/TCBB.2013.26},
doi = {10.1109/TCBB.2013.26},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/BozdagCL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DumaWGNRACCL13,
author = {Denisa Duma and
Mary Wootters and
Anna C. Gilbert and
Hung Q. Ngo and
Atri Rudra and
Matthew Alpert and
Timothy J. Close and
Gianfranco Ciardo and
Stefano Lonardi},
editor = {Aaron E. Darling and
Jens Stoye},
title = {Accurate Decoding of Pooled Sequenced Data Using Compressed Sensing},
booktitle = {Algorithms in Bioinformatics - 13th International Workshop, {WABI}
2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8126},
pages = {70--84},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40453-5\_7},
doi = {10.1007/978-3-642-40453-5\_7},
timestamp = {Tue, 21 Mar 2023 21:00:29 +0100},
biburl = {https://dblp.org/rec/conf/wabi/DumaWGNRACCL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PolishkoPRL12,
author = {Anton Polishko and
Nadia Ponts and
Karine G. Le Roch and
Stefano Lonardi},
title = {NOrMAL: accurate nucleosome positioning using a modified Gaussian
mixture model},
journal = {Bioinform.},
volume = {28},
number = {12},
pages = {242--249},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts206},
doi = {10.1093/BIOINFORMATICS/BTS206},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PolishkoPRL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarrisPRL12,
author = {Elena Yavorska Harris and
Nadia Ponts and
Karine G. Le Roch and
Stefano Lonardi},
title = {{BRAT-BW:} efficient and accurate mapping of bisulfite-treated reads},
journal = {Bioinform.},
volume = {28},
number = {13},
pages = {1795--1796},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts264},
doi = {10.1093/BIOINFORMATICS/BTS264},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarrisPRL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/RakthanmanonKLE12,
author = {Thanawin Rakthanmanon and
Eamonn J. Keogh and
Stefano Lonardi and
Scott Evans},
title = {MDL-based time series clustering},
journal = {Knowl. Inf. Syst.},
volume = {33},
number = {2},
pages = {371--399},
year = {2012},
url = {https://doi.org/10.1007/s10115-012-0508-7},
doi = {10.1007/S10115-012-0508-7},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kais/RakthanmanonKLE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpec/FernandezNLV12,
author = {Edward Fernandez and
Walid A. Najjar and
Stefano Lonardi and
Jason R. Villarreal},
title = {Multithreaded {FPGA} acceleration of {DNA} sequence mapping},
booktitle = {{IEEE} Conference on High Performance Extreme Computing, {HPEC} 2012,
Waltham, MA, USA, September 10-12, 2012},
pages = {1--6},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/HPEC.2012.6408669},
doi = {10.1109/HPEC.2012.6408669},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hpec/FernandezNLV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/WuCL11,
author = {Yonghui Wu and
Timothy J. Close and
Stefano Lonardi},
title = {Accurate Construction of Consensus Genetic Maps via Integer Linear
Programming},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {2},
pages = {381--394},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2010.35},
doi = {10.1109/TCBB.2010.35},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/WuCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/birthday/0001RHELK11,
author = {Bing Hu and
Thanawin Rakthanmanon and
Yuan Hao and
Scott Evans and
Stefano Lonardi and
Eamonn J. Keogh},
editor = {David L. Dowe},
title = {Towards Discovering the Intrinsic Cardinality and Dimensionality of
Time Series Using {MDL}},
booktitle = {Algorithmic Probability and Friends. Bayesian Prediction and Artificial
Intelligence - Papers from the Ray Solomonoff 85th Memorial Conference,
Melbourne, VIC, Australia, November 30 - December 2, 2011},
series = {Lecture Notes in Computer Science},
volume = {7070},
pages = {184--197},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-44958-1\_14},
doi = {10.1007/978-3-642-44958-1\_14},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/birthday/0001RHELK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fccm/FernandezNL11,
author = {Edward Fernandez and
Walid A. Najjar and
Stefano Lonardi},
editor = {Paul Chow and
Michael J. Wirthlin},
title = {String Matching in Hardware Using the FM-Index},
booktitle = {{IEEE} 19th Annual International Symposium on Field-Programmable Custom
Computing Machines, {FCCM} 2011, Salt Lake City, Utah, USA, 1-3 May
2011},
pages = {218--225},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/FCCM.2011.55},
doi = {10.1109/FCCM.2011.55},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fccm/FernandezNL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/RakthanmanonKLE11,
author = {Thanawin Rakthanmanon and
Eamonn J. Keogh and
Stefano Lonardi and
Scott Evans},
editor = {Diane J. Cook and
Jian Pei and
Wei Wang and
Osmar R. Za{\"{\i}}ane and
Xindong Wu},
title = {Time Series Epenthesis: Clustering Time Series Streams Requires Ignoring
Some Data},
booktitle = {11th {IEEE} International Conference on Data Mining, {ICDM} 2011,
Vancouver, BC, Canada, December 11-14, 2011},
pages = {547--556},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICDM.2011.146},
doi = {10.1109/ICDM.2011.146},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/RakthanmanonKLE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/HuRHELK11,
author = {Bing Hu and
Thanawin Rakthanmanon and
Yuan Hao and
Scott Evans and
Stefano Lonardi and
Eamonn J. Keogh},
editor = {Diane J. Cook and
Jian Pei and
Wei Wang and
Osmar R. Za{\"{\i}}ane and
Xindong Wu},
title = {Discovering the Intrinsic Cardinality and Dimensionality of Time Series
Using {MDL}},
booktitle = {11th {IEEE} International Conference on Data Mining, {ICDM} 2011,
Vancouver, BC, Canada, December 11-14, 2011},
pages = {1086--1091},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICDM.2011.54},
doi = {10.1109/ICDM.2011.54},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/HuRHELK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1112-4438,
author = {Stefano Lonardi and
Denisa Duma and
Matthew Alpert and
Francesca Cordero and
Marco Beccuti and
Prasanna Bhat and
Yonghui Wu and
Gianfranco Ciardo and
Burair Alsaihati and
Yaqin Ma and
Steve Wanamaker and
Josh Resnik and
Timothy J. Close},
title = {Barcoding-free {BAC} Pooling Enables Combinatorial Selective Sequencing
of the Barley Gene Space},
journal = {CoRR},
volume = {abs/1112.4438},
year = {2011},
url = {http://arxiv.org/abs/1112.4438},
eprinttype = {arXiv},
eprint = {1112.4438},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1112-4438.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarrisPLRL10,
author = {Elena Yavorska Harris and
Nadia Ponts and
Aleksandr Levchuk and
Karine G. Le Roch and
Stefano Lonardi},
title = {{BRAT:} bisulfite-treated reads analysis tool},
journal = {Bioinform.},
volume = {26},
number = {4},
pages = {572--573},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btp706},
doi = {10.1093/BIOINFORMATICS/BTP706},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarrisPLRL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarrisPLRL10a,
author = {Elena Yavorska Harris and
Nadia Ponts and
Aleksandr Levchuk and
Karine G. Le Roch and
Stefano Lonardi},
title = {{BRAT:} bisulfite-treated reads analysis tool},
journal = {Bioinform.},
volume = {26},
number = {19},
pages = {2499},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq494},
doi = {10.1093/BIOINFORMATICS/BTQ494},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarrisPLRL10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LiuWLJ10,
author = {Lan Liu and
Yonghui Wu and
Stefano Lonardi and
Tao Jiang},
title = {Efficient Genome-Wide TagSNP Selection Across Populations via the
Linkage Disequilibrium Criterion},
journal = {J. Comput. Biol.},
volume = {17},
number = {1},
pages = {21--37},
year = {2010},
url = {https://doi.org/10.1089/cmb.2007.0228},
doi = {10.1089/CMB.2007.0228},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/LiuWLJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/VacicILR10,
author = {Vladimir Vacic and
Lilia M. Iakoucheva and
Stefano Lonardi and
Predrag Radivojac},
title = {Graphlet Kernels for Prediction of Functional Residues in Protein
Structures},
journal = {J. Comput. Biol.},
volume = {17},
number = {1},
pages = {55--72},
year = {2010},
url = {https://doi.org/10.1089/cmb.2009.0029},
doi = {10.1089/CMB.2009.0029},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/VacicILR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/LonardiC10,
author = {Stefano Lonardi and
Jake Yue Chen},
title = {Data Mining in Bioinformatics: Selected Papers from {BIOKDD}},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {7},
number = {2},
pages = {195--196},
year = {2010},
url = {https://doi.org/10.1109/TCBB.2010.28},
doi = {10.1109/TCBB.2010.28},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/LonardiC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fpl/FernandezNHL10,
author = {Edward Fernandez and
Walid A. Najjar and
Elena Yavorska Harris and
Stefano Lonardi},
title = {Exploration of Short Reads Genome Mapping in Hardware},
booktitle = {International Conference on Field Programmable Logic and Applications,
{FPL} 2010, August 31 2010 - September 2, 2010, Milano, Italy},
pages = {360--363},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/FPL.2010.78},
doi = {10.1109/FPL.2010.78},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fpl/FernandezNHL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/spire/2010,
editor = {Edgar Ch{\'{a}}vez and
Stefano Lonardi},
title = {String Processing and Information Retrieval - 17th International Symposium,
{SPIRE} 2010, Los Cabos, Mexico, October 11-13, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6393},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16321-0},
doi = {10.1007/978-3-642-16321-0},
isbn = {978-3-642-16320-3},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/spire/2010.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BozdagCL09,
author = {Serdar Bozdag and
Timothy J. Close and
Stefano Lonardi},
title = {A compartmentalized approach to the assembly of physical maps},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-217},
doi = {10.1186/1471-2105-10-217},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BozdagCL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/HarrisLKL09,
author = {Elena Yavorska Harris and
Thierry Lecroq and
Gregory Kucherov and
Stefano Lonardi},
editor = {Gregory Kucherov and
Esko Ukkonen},
title = {CPM's 20th Anniversary: {A} Statistical Retrospective},
booktitle = {Combinatorial Pattern Matching, 20th Annual Symposium, {CPM} 2009,
Lille, France, June 22-24, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5577},
pages = {1--11},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-02441-2\_1},
doi = {10.1007/978-3-642-02441-2\_1},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cpm/HarrisLKL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/WuLCL08,
author = {Yonghui Wu and
Lan Liu and
Timothy J. Close and
Stefano Lonardi},
title = {Deconvoluting BAC-Gene Relationships Using a Physical Map},
journal = {J. Bioinform. Comput. Biol.},
volume = {6},
number = {3},
pages = {603--622},
year = {2008},
url = {https://doi.org/10.1142/S0219720008003564},
doi = {10.1142/S0219720008003564},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/WuLCL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/WuL08,
author = {Yonghui Wu and
Stefano Lonardi},
title = {A Linear-Time Algorithm for Predicting Functional Annotations from
{PPI} Networks},
journal = {J. Bioinform. Comput. Biol.},
volume = {6},
number = {6},
pages = {1049--1065},
year = {2008},
url = {https://doi.org/10.1142/S0219720008003916},
doi = {10.1142/S0219720008003916},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/WuL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigkdd/ChenZL08,
author = {Jake Y. Chen and
Mohammed Javeed Zaki and
Stefano Lonardi},
title = {{BIOKDD} 2008: a workshop report on data mining in bioinformatics},
journal = {{SIGKDD} Explor.},
volume = {10},
number = {2},
pages = {51--53},
year = {2008},
url = {https://doi.org/10.1145/1540276.1540292},
doi = {10.1145/1540276.1540292},
timestamp = {Tue, 29 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sigkdd/ChenZL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/GiancarloL08,
author = {Raffaele Giancarlo and
Stefano Lonardi},
title = {Foreword: Special issue in honor of the 60th Birthday of Professor
Alberto Apostolico: Work is for people who do not know how to: {SAIL}
- String Algorithms, Information and Learning},
journal = {Theor. Comput. Sci.},
volume = {395},
number = {2-3},
pages = {135--136},
year = {2008},
url = {https://doi.org/10.1016/j.tcs.2008.01.016},
doi = {10.1016/J.TCS.2008.01.016},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/GiancarloL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/VacicJZL08,
author = {Vladimir Vacic and
Hailing Jin and
Jian{-}Kang Zhu and
Stefano Lonardi},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {A Probabilistic Model for Small {RNA} Flowgram Matching},
booktitle = {Biocomputing 2008, Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, 4-8 January 2008},
pages = {75--86},
publisher = {World Scientific},
year = {2008},
url = {http://psb.stanford.edu/psb-online/proceedings/psb08/vavic.pdf},
timestamp = {Fri, 05 May 2017 13:11:14 +0200},
biburl = {https://dblp.org/rec/conf/psb/VacicJZL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/BozdagCL08,
author = {Serdar Bozdag and
Timothy J. Close and
Stefano Lonardi},
editor = {Keith A. Crandall and
Jens Lagergren},
title = {Computing the Minimal Tiling Path from a Physical Map by Integer Linear
Programming},
booktitle = {Algorithms in Bioinformatics, 8th International Workshop, {WABI} 2008,
Karlsruhe, Germany, September 15-19, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5251},
pages = {148--161},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-87361-7\_13},
doi = {10.1007/978-3-540-87361-7\_13},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/BozdagCL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VacicUDL07,
author = {Vladimir Vacic and
Vladimir N. Uversky and
A. Keith Dunker and
Stefano Lonardi},
title = {Composition Profiler: a tool for discovery and visualization of amino
acid composition differences},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-211},
doi = {10.1186/1471-2105-8-211},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VacicUDL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/KeoghLRWLH07,
author = {Eamonn J. Keogh and
Stefano Lonardi and
Chotirat Ann Ratanamahatana and
Li Wei and
Sang{-}Hee Lee and
John C. Handley},
title = {Compression-based data mining of sequential data},
journal = {Data Min. Knowl. Discov.},
volume = {14},
number = {1},
pages = {99--129},
year = {2007},
url = {https://doi.org/10.1007/s10618-006-0049-3},
doi = {10.1007/S10618-006-0049-3},
timestamp = {Tue, 05 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/datamine/KeoghLRWLH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/LinKWL07,
author = {Jessica Lin and
Eamonn J. Keogh and
Li Wei and
Stefano Lonardi},
title = {Experiencing {SAX:} a novel symbolic representation of time series},
journal = {Data Min. Knowl. Discov.},
volume = {15},
number = {2},
pages = {107--144},
year = {2007},
url = {https://doi.org/10.1007/s10618-007-0064-z},
doi = {10.1007/S10618-007-0064-Z},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/datamine/LinKWL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/YangL07,
author = {Qiaofeng Yang and
Stefano Lonardi},
title = {A parallel edge-betweenness clustering tool for Protein-Protein Interaction
networks},
journal = {Int. J. Data Min. Bioinform.},
volume = {1},
number = {3},
pages = {241--247},
year = {2007},
url = {https://doi.org/10.1504/IJDMB.2007.011611},
doi = {10.1504/IJDMB.2007.011611},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijdmb/YangL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tit/LonardiSW07,
author = {Stefano Lonardi and
Wojciech Szpankowski and
Mark Daniel Ward},
title = {Error Resilient LZ'77 Data Compression: Algorithms, Analysis, and
Experiments},
journal = {{IEEE} Trans. Inf. Theory},
volume = {53},
number = {5},
pages = {1799--1813},
year = {2007},
url = {https://doi.org/10.1109/TIT.2007.894689},
doi = {10.1109/TIT.2007.894689},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tit/LonardiSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/BozdagCL07,
author = {Serdar Bozdag and
Timothy J. Close and
Stefano Lonardi},
title = {A Compartmentalized Approach to the Assembly of Physical Maps},
booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
School, Boston, MA, {USA}},
pages = {218--225},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBE.2007.4375568},
doi = {10.1109/BIBE.2007.4375568},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibe/BozdagCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/SirowyWLV07,
author = {Scott Sirowy and
Yonghui Wu and
Stefano Lonardi and
Frank Vahid},
editor = {Rudy Lauwereins and
Jan Madsen},
title = {Two-level microprocessor-accelerator partitioning},
booktitle = {2007 Design, Automation and Test in Europe Conference and Exposition,
{DATE} 2007, Nice, France, April 16-20, 2007},
pages = {313--318},
publisher = {{EDA} Consortium, San Jose, CA, {USA}},
year = {2007},
url = {https://doi.org/10.1109/DATE.2007.364610},
doi = {10.1109/DATE.2007.364610},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/SirowyWLV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/SirowyWLV07a,
author = {Scott Sirowy and
Yonghui Wu and
Stefano Lonardi and
Frank Vahid},
editor = {Rudy Lauwereins and
Jan Madsen},
title = {Clock-frequency assignment for multiple clock domain systems-on-a-chip},
booktitle = {2007 Design, Automation and Test in Europe Conference and Exposition,
{DATE} 2007, Nice, France, April 16-20, 2007},
pages = {397--402},
publisher = {{EDA} Consortium, San Jose, CA, {USA}},
year = {2007},
url = {https://doi.org/10.1109/DATE.2007.364624},
doi = {10.1109/DATE.2007.364624},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/SirowyWLV07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/SheldonVL07,
author = {David Sheldon and
Frank Vahid and
Stefano Lonardi},
editor = {Rudy Lauwereins and
Jan Madsen},
title = {Interactive presentation: Soft-core processor customization using
the design of experiments paradigm},
booktitle = {2007 Design, Automation and Test in Europe Conference and Exposition,
{DATE} 2007, Nice, France, April 16-20, 2007},
pages = {821--826},
publisher = {{EDA} Consortium, San Jose, CA, {USA}},
year = {2007},
url = {https://doi.org/10.1109/DATE.2007.364392},
doi = {10.1109/DATE.2007.364392},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/SheldonVL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/WuBCL07,
author = {Yonghui Wu and
Prasanna Bhat and
Timothy J. Close and
Stefano Lonardi},
editor = {Raffaele Giancarlo and
Sridhar Hannenhalli},
title = {Efficient and Accurate Construction of Genetic Linkage Maps from Noisy
and Missing Genotyping Data},
booktitle = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4645},
pages = {395--406},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-74126-8\_37},
doi = {10.1007/978-3-540-74126-8\_37},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/WuBCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhengSMCJL06,
author = {Jie Zheng and
Jan T. Svensson and
Kavitha Madishetty and
Timothy J. Close and
Tao Jiang and
Stefano Lonardi},
title = {OligoSpawn: a software tool for the design of overgo probes from large
unigene datasets},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {7},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-7},
doi = {10.1186/1471-2105-7-7},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhengSMCJL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/BagnallRKLJ06,
author = {Anthony J. Bagnall and
Chotirat (Ann) Ratanamahatana and
Eamonn J. Keogh and
Stefano Lonardi and
Gareth J. Janacek},
title = {A Bit Level Representation for Time Series Data Mining with Shape
Based Similarity},
journal = {Data Min. Knowl. Discov.},
volume = {13},
number = {1},
pages = {11--40},
year = {2006},
url = {https://doi.org/10.1007/s10618-005-0028-0},
doi = {10.1007/S10618-005-0028-0},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/datamine/BagnallRKLJ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijsnet/LinKGL06,
author = {Song Lin and
Vana Kalogeraki and
Dimitrios Gunopulos and
Stefano Lonardi},
title = {Efficient information compression in sensor networks},
journal = {Int. J. Sens. Networks},
volume = {1},
number = {3/4},
pages = {229--240},
year = {2006},
url = {https://doi.org/10.1504/IJSNET.2006.012038},
doi = {10.1504/IJSNET.2006.012038},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijsnet/LinKGL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ngc/LonardiLKC06,
author = {Stefano Lonardi and
Jessica Lin and
Eamonn J. Keogh and
Bill Yuan{-}chi Chiu},
title = {Efficient Discovery of Unusual Patterns in Time Series},
journal = {New Gener. Comput.},
volume = {25},
number = {1},
pages = {61--93},
year = {2006},
url = {https://doi.org/10.1007/s00354-006-0004-2},
doi = {10.1007/S00354-006-0004-2},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ngc/LonardiLKC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/LonardiSY06,
author = {Stefano Lonardi and
Wojciech Szpankowski and
Qiaofeng Yang},
title = {Finding biclusters by random projections},
journal = {Theor. Comput. Sci.},
volume = {368},
number = {3},
pages = {217--230},
year = {2006},
url = {https://doi.org/10.1016/j.tcs.2006.09.023},
doi = {10.1016/J.TCS.2006.09.023},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/LonardiSY06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaim/YangLM06,
author = {Qiaofeng Yang and
Stefano Lonardi and
Avraham A. Melkman},
editor = {Siu{-}Wing Cheng and
Chung Keung Poon},
title = {A Compression-Boosting Transform for Two-Dimensional Data},
booktitle = {Algorithmic Aspects in Information and Management, Second International
Conference, {AAIM} 2006, Hong Kong, China, June 20-22, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4041},
pages = {126--137},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11775096\_13},
doi = {10.1007/11775096\_13},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aaim/YangLM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/WuLS06,
author = {Yonghui Wu and
Stefano Lonardi and
Wojciech Szpankowski},
title = {Error-Resilient {LZW} Data Compression},
booktitle = {2006 Data Compression Conference {(DCC} 2006), 28-30 March 2006, Snowbird,
UT, {USA}},
pages = {193--202},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/DCC.2006.33},
doi = {10.1109/DCC.2006.33},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/WuLS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icc/LinKGL06,
author = {Song Lin and
Vana Kalogeraki and
Dimitrios Gunopulos and
Stefano Lonardi},
title = {Online Information Compression in Sensor Networks},
booktitle = {Proceedings of {IEEE} International Conference on Communications,
{ICC} 2006, Istanbul, Turkey, 11-15 June 2006},
pages = {3371--3376},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/ICC.2006.255237},
doi = {10.1109/ICC.2006.255237},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icc/LinKGL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/KeoghWXLSS06,
author = {Eamonn J. Keogh and
Li Wei and
Xiaopeng Xi and
Stefano Lonardi and
Jin Shieh and
Scott Sirowy},
title = {Intelligent Icons: Integrating Lite-Weight Data Mining and Visualization
into {GUI} Operating Systems},
booktitle = {Proceedings of the 6th {IEEE} International Conference on Data Mining
{(ICDM} 2006), 18-22 December 2006, Hong Kong, China},
pages = {912--916},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/ICDM.2006.90},
doi = {10.1109/ICDM.2006.90},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/KeoghWXLSS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ivs/LinKL05,
author = {Jessica Lin and
Eamonn J. Keogh and
Stefano Lonardi},
title = {Visualizing and discovering non-trivial patterns in large time series
databases},
journal = {Inf. Vis.},
volume = {4},
number = {2},
pages = {61--82},
year = {2005},
url = {https://doi.org/10.1057/palgrave.ivs.9500089},
doi = {10.1057/PALGRAVE.IVS.9500089},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ivs/LinKL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jucs/WeiKXL05,
author = {Li Wei and
Eamonn J. Keogh and
Xiaopeng Xi and
Stefano Lonardi},
title = {Integrating Lite-Weight but Ubiquitous Data Mining into {GUI} Operating
Systems},
journal = {J. Univers. Comput. Sci.},
volume = {11},
number = {11},
pages = {1820--1834},
year = {2005},
url = {https://doi.org/10.3217/jucs-011-11-1820},
doi = {10.3217/JUCS-011-11-1820},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jucs/WeiKXL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChenZFNZLJ05,
author = {Xin Chen and
Jie Zheng and
Zheng Fu and
Peng Nan and
Yang Zhong and
Stefano Lonardi and
Tao Jiang},
title = {Assignment of Orthologous Genes via Genome Rearrangement},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {2},
number = {4},
pages = {302--315},
year = {2005},
url = {https://doi.org/10.1109/TCBB.2005.48},
doi = {10.1109/TCBB.2005.48},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChenZFNZLJ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenZFNZLJ05,
author = {Xin Chen and
Jie Zheng and
Zheng Fu and
Peng Nan and
Yang Zhong and
Stefano Lonardi and
Tao Jiang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Computing the Assignment of Orthologous Genes via Genome Rearrangement},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {363--378},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/taojiang.pdf},
timestamp = {Wed, 22 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChenZFNZLJ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ZhengL05,
author = {Jie Zheng and
Stefano Lonardi},
title = {Discovery of Repetitive Patterns in {DNA} with Accurate Boundaries},
booktitle = {Fifth {IEEE} International Symposium on Bioinformatic and Bioengineering
{(BIBE} 2005), 19-21 October 2005, Minneapolis, MN, {USA}},
pages = {105--112},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/BIBE.2005.23},
doi = {10.1109/BIBE.2005.23},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ZhengL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/WeiKLKLRH05,
author = {Li Wei and
Nitin Kumar and
Venkata Nishanth Lolla and
Eamonn J. Keogh and
Stefano Lonardi and
Chotirat (Ann) Ratanamahatana and
Helga Van Herle},
title = {A Practical Tool for Visualizing and Data Mining Medical Time Series},
booktitle = {18th {IEEE} Symposium on Computer-Based Medical Systems {(CBMS} 2005),
23-24 June 2005, Dublin, Ireland},
pages = {341--346},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/CBMS.2005.17},
doi = {10.1109/CBMS.2005.17},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/WeiKLKLRH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YangL05,
author = {Qiaofeng Yang and
Stefano Lonardi},
title = {A Parallel Algorithm for Clustering Protein-Protein Interaction Networks},
booktitle = {Fourth International {IEEE} Computer Society Computational Systems
Bioinformatics Conference Workshops {\&} Poster Abstracts, {CSB}
2005 Workshops, Stanford, CA, USA, August 8-11, 2005},
pages = {174--177},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/CSBW.2005.13},
doi = {10.1109/CSBW.2005.13},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/YangL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/LinGLK05,
author = {Song Lin and
Dimitrios Gunopulos and
Stefano Lonardi and
Vana Kalogeraki},
title = {Applying {LVQ} Techniques to Compress Historical Information in Sensor
Networks},
booktitle = {2005 Data Compression Conference {(DCC} 2005), 29-31 March 2005, Snowbird,
UT, {USA}},
pages = {468},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/DCC.2005.16},
doi = {10.1109/DCC.2005.16},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/LinGLK05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/YangL05,
author = {Qiaofeng Yang and
Stefano Lonardi},
title = {A Compression-Boosting Transform for 2D Data},
booktitle = {2005 Data Compression Conference {(DCC} 2005), 29-31 March 2005, Snowbird,
UT, {USA}},
pages = {492},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/DCC.2005.2},
doi = {10.1109/DCC.2005.2},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/YangL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictai/YankovKLF05,
author = {Dragomir Yankov and
Eamonn J. Keogh and
Stefano Lonardi and
Ada Wai{-}Chee Fu},
title = {Dot Plots for Time Series Analysis},
booktitle = {17th {IEEE} International Conference on Tools with Artificial Intelligence
{(ICTAI} 2005), 14-16 November 2005, Hong Kong, China},
pages = {159--168},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/ICTAI.2005.60},
doi = {10.1109/ICTAI.2005.60},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ictai/YankovKLF05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/RatanamahatanaKBL05,
author = {Chotirat (Ann) Ratanamahatana and
Eamonn J. Keogh and
Anthony J. Bagnall and
Stefano Lonardi},
editor = {Tu Bao Ho and
David Wai{-}Lok Cheung and
Huan Liu},
title = {A Novel Bit Level Time Series Representation with Implication of Similarity
Search and Clustering},
booktitle = {Advances in Knowledge Discovery and Data Mining, 9th Pacific-Asia
Conference, {PAKDD} 2005, Hanoi, Vietnam, May 18-20, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3518},
pages = {771--777},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11430919\_90},
doi = {10.1007/11430919\_90},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/RatanamahatanaKBL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/KumarLKLR05,
author = {Nitin Kumar and
Venkata Nishanth Lolla and
Eamonn J. Keogh and
Stefano Lonardi and
Chotirat (Ann) Ratanamahatana},
editor = {Hillol Kargupta and
Jaideep Srivastava and
Chandrika Kamath and
Arnold Goodman},
title = {Time-series Bitmaps: a Practical Visualization Tool for Working with
Large Time Series Databases},
booktitle = {Proceedings of the 2005 {SIAM} International Conference on Data Mining,
{SDM} 2005, Newport Beach, CA, USA, April 21-23, 2005},
pages = {531--535},
publisher = {{SIAM}},
year = {2005},
url = {https://doi.org/10.1137/1.9781611972757.55},
doi = {10.1137/1.9781611972757.55},
timestamp = {Fri, 06 Oct 2023 11:45:43 +0200},
biburl = {https://dblp.org/rec/conf/sdm/KumarLKLR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/WeiKLKLR05,
author = {Li Wei and
Nitin Kumar and
Venkata Nishanth Lolla and
Eamonn J. Keogh and
Stefano Lonardi and
Chotirat (Ann) Ratanamahatana},
editor = {James Frew},
title = {Assumption-Free Anomaly Detection in Time Series},
booktitle = {17th International Conference on Scientific and Statistical Database
Management, {SSDBM} 2005, 27-29 June 2005, University of California,
Santa Barbara, CA, USA, Proceedings},
pages = {237--240},
year = {2005},
timestamp = {Tue, 14 Nov 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/WeiKLKLR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/time/LinGKL05,
author = {Song Lin and
Dimitrios Gunopulos and
Vana Kalogeraki and
Stefano Lonardi},
title = {A Data Compression Technique for Sensor Networks with Dynamic Bandwidth
Allocation},
booktitle = {12th International Symposium on Temporal Representation and Reasoning
{(TIME} 2005), 23-25 June 2005, Burlington, Vermont, {USA}},
pages = {186--188},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/TIME.2005.6},
doi = {10.1109/TIME.2005.6},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/time/LinGKL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhengCJL04,
author = {Jie Zheng and
Timothy J. Close and
Tao Jiang and
Stefano Lonardi},
title = {Efficient selection of unique and popular oligos for large {EST} databases},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2101--2112},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth210},
doi = {10.1093/BIOINFORMATICS/BTH210},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhengCJL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/AtallahL04,
author = {Mikhail J. Atallah and
Stefano Lonardi},
title = {Augmenting {LZ-77} with authentication and integrity assurance capabilities},
journal = {Concurr. Pract. Exp.},
volume = {16},
number = {11},
pages = {1063--1076},
year = {2004},
url = {https://doi.org/10.1002/cpe.804},
doi = {10.1002/CPE.804},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/concurrency/AtallahL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcst/ApostolicoGL04,
author = {Alberto Apostolico and
Fang{-}Cheng Gong and
Stefano Lonardi},
title = {Verbumculus and the Discovery of Unusual Words},
journal = {J. Comput. Sci. Technol.},
volume = {19},
number = {1},
pages = {22--41},
year = {2004},
url = {https://doi.org/10.1007/BF02944783},
doi = {10.1007/BF02944783},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcst/ApostolicoGL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/JansonLS04,
author = {Svante Janson and
Stefano Lonardi and
Wojciech Szpankowski},
title = {On average sequence complexity},
journal = {Theor. Comput. Sci.},
volume = {326},
number = {1-3},
pages = {213--227},
year = {2004},
url = {https://doi.org/10.1016/j.tcs.2004.06.023},
doi = {10.1016/J.TCS.2004.06.023},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/JansonLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acsw/KeoghLLC04,
author = {Eamonn J. Keogh and
Jessica Lin and
Stefano Lonardi and
Bill Yuan{-}chi Chiu},
editor = {James M. Hogan and
Paul Montague and
Martin K. Purvis and
Chris Steketee},
title = {We Have Seen the Future, and It Is Symbolic},
booktitle = {{ACSW} Frontiers 2004, 2004 {ACSW} Workshops - the Australasian Information
Security Workshop (AISW2004), the Australasian Workshop on Data Mining
and Web Intelligence (DMWI2004), and the Australasian Workshop on
Software Internationalisation {(AWSI2004)} . Dunedin, New Zealand,
January 2004},
series = {{CRPIT}},
volume = {32},
pages = {83},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV32Keogh.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/acsw/KeoghLLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/JansonLS04,
author = {Svante Janson and
Stefano Lonardi and
Wojciech Szpankowski},
editor = {S{\"{u}}leyman Cenk Sahinalp and
S. Muthukrishnan and
Ugur Dogrus{\"{o}}z},
title = {On the Average Sequence Complexity},
booktitle = {Combinatorial Pattern Matching, 15th Annual Symposium, {CPM} 2004,
Istanbul,Turkey, July 5-7, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3109},
pages = {74--88},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-27801-6\_6},
doi = {10.1007/978-3-540-27801-6\_6},
timestamp = {Fri, 07 May 2021 12:57:04 +0200},
biburl = {https://dblp.org/rec/conf/cpm/JansonLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/LonardiSY04,
author = {Stefano Lonardi and
Wojciech Szpankowski and
Qiaofeng Yang},
editor = {S{\"{u}}leyman Cenk Sahinalp and
S. Muthukrishnan and
Ugur Dogrus{\"{o}}z},
title = {Finding Biclusters by Random Projections},
booktitle = {Combinatorial Pattern Matching, 15th Annual Symposium, {CPM} 2004,
Istanbul,Turkey, July 5-7, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3109},
pages = {102--116},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-27801-6\_8},
doi = {10.1007/978-3-540-27801-6\_8},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cpm/LonardiSY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LonardiL04,
author = {Stefano Lonardi and
Yu Luo},
title = {Gridding and Compression of Microarray Images},
booktitle = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
pages = {122--130},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/CSB.2004.1332424},
doi = {10.1109/CSB.2004.1332424},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/LonardiL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/JansonLS04,
author = {Svante Janson and
Stefano Lonardi and
Wojciech Szpankowski},
title = {On the Average Sequence Complexity},
booktitle = {2004 Data Compression Conference {(DCC} 2004), 23-25 March 2004, Snowbird,
UT, {USA}},
pages = {542},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/DCC.2004.1281518},
doi = {10.1109/DCC.2004.1281518},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/JansonLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isit/LonardiSW04,
author = {Stefano Lonardi and
Wojciech Szpankowski and
Mark Daniel Ward},
title = {Error resilient LZ'77 scheme and its analysis},
booktitle = {Proceedings of the 2004 {IEEE} International Symposium on Information
Theory, {ISIT} 2004, Chicago Downtown Marriott, Chicago, Illinois,
USA, June 27 - July 2, 2004},
pages = {56},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/ISIT.2004.1365095},
doi = {10.1109/ISIT.2004.1365095},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/isit/LonardiSW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/KeoghLR04,
author = {Eamonn J. Keogh and
Stefano Lonardi and
Chotirat (Ann) Ratanamahatana},
editor = {Won Kim and
Ron Kohavi and
Johannes Gehrke and
William DuMouchel},
title = {Towards parameter-free data mining},
booktitle = {Proceedings of the Tenth {ACM} {SIGKDD} International Conference on
Knowledge Discovery and Data Mining, Seattle, Washington, USA, August
22-25, 2004},
pages = {206--215},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/1014052.1014077},
doi = {10.1145/1014052.1014077},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/KeoghLR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/LinKLLN04,
author = {Jessica Lin and
Eamonn J. Keogh and
Stefano Lonardi and
Jeffrey P. Lankford and
Donna M. Nystrom},
editor = {Won Kim and
Ron Kohavi and
Johannes Gehrke and
William DuMouchel},
title = {Visually mining and monitoring massive time series},
booktitle = {Proceedings of the Tenth {ACM} {SIGKDD} International Conference on
Knowledge Discovery and Data Mining, Seattle, Washington, USA, August
22-25, 2004},
pages = {460--469},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/1014052.1014104},
doi = {10.1145/1014052.1014104},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/LinKLLN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vldb/LinKLLN04,
author = {Jessica Lin and
Eamonn J. Keogh and
Stefano Lonardi and
Jeffrey P. Lankford and
Donna M. Nystrom},
editor = {Mario A. Nascimento and
M. Tamer {\"{O}}zsu and
Donald Kossmann and
Ren{\'{e}}e J. Miller and
Jos{\'{e}} A. Blakeley and
K. Bernhard Schiefer},
title = {VizTree: a Tool for Visually Mining and Monitoring Massive Time Series
Databases},
booktitle = {(e)Proceedings of the Thirtieth International Conference on Very Large
Data Bases, {VLDB} 2004, Toronto, Canada, August 31 - September 3
2004},
pages = {1269--1272},
publisher = {Morgan Kaufmann},
year = {2004},
url = {http://www.vldb.org/conf/2004/DEMP6.PDF},
doi = {10.1016/B978-012088469-8.50124-8},
timestamp = {Fri, 07 Jun 2019 12:44:00 +0200},
biburl = {https://dblp.org/rec/conf/vldb/LinKLLN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/KurtzL04,
author = {Stefan Kurtz and
Stefano Lonardi},
editor = {Dinesh P. Mehta and
Sartaj Sahni},
title = {Computational Biology},
booktitle = {Handbook of Data Structures and Applications},
publisher = {Chapman and Hall/CRC},
year = {2004},
url = {https://doi.org/10.1201/9781420035179.ch58},
doi = {10.1201/9781420035179.CH58},
timestamp = {Thu, 19 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/crc/KurtzL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ApostolicoBL03,
author = {Alberto Apostolico and
Mary Ellen Bock and
Stefano Lonardi},
title = {Monotony of Surprise and Large-Scale Quest for Unusual Words},
journal = {J. Comput. Biol.},
volume = {10},
number = {3/4},
pages = {283--311},
year = {2003},
url = {https://doi.org/10.1089/10665270360688020},
doi = {10.1089/10665270360688020},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/ApostolicoBL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/ZhengCJL03,
author = {Jie Zheng and
Timothy J. Close and
Tao Jiang and
Stefano Lonardi},
editor = {Ricardo A. Baeza{-}Yates and
Edgar Ch{\'{a}}vez and
Maxime Crochemore},
title = {Efficient Selection of Unique and Popular Oligos for Large {EST} Databases},
booktitle = {Combinatorial Pattern Matching, 14th Annual Symposium, {CPM} 2003,
Morelia, Michoc{\'{a}}n, Mexico, June 25-27, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2676},
pages = {384--401},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/3-540-44888-8\_28},
doi = {10.1007/3-540-44888-8\_28},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cpm/ZhengCJL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/LonardiS03,
author = {Stefano Lonardi and
Wojciech Szpankowski},
title = {Joint Source-Channel LZ'77 Coding},
booktitle = {2003 Data Compression Conference {(DCC} 2003), 25-27 March 2003, Snowbird,
UT, {USA}},
pages = {273--282},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/DCC.2003.1194018},
doi = {10.1109/DCC.2003.1194018},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/LonardiS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dmkd/LinKLC03,
author = {Jessica Lin and
Eamonn J. Keogh and
Stefano Lonardi and
Bill Yuan{-}chi Chiu},
editor = {Mohammed Javeed Zaki and
Charu C. Aggarwal},
title = {A symbolic representation of time series, with implications for streaming
algorithms},
booktitle = {Proceedings of the 8th {ACM} {SIGMOD} workshop on Research issues
in data mining and knowledge discovery, {DMKD} 2003, San Diego, California,
USA, June 13, 2003},
pages = {2--11},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/882082.882086},
doi = {10.1145/882082.882086},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dmkd/LinKLC03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/ChiuKL03,
author = {Bill Yuan{-}chi Chiu and
Eamonn J. Keogh and
Stefano Lonardi},
editor = {Lise Getoor and
Ted E. Senator and
Pedro M. Domingos and
Christos Faloutsos},
title = {Probabilistic discovery of time series motifs},
booktitle = {Proceedings of the Ninth {ACM} {SIGKDD} International Conference on
Knowledge Discovery and Data Mining, Washington, DC, USA, August 24
- 27, 2003},
pages = {493--498},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/956750.956808},
doi = {10.1145/956750.956808},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/ChiuKL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sac/AtallahL03,
author = {Mikhail J. Atallah and
Stefano Lonardi},
editor = {Gary B. Lamont and
Hisham Haddad and
George A. Papadopoulos and
Brajendra Panda},
title = {Authentication of {LZ-77} Compressed Data},
booktitle = {Proceedings of the 2003 {ACM} Symposium on Applied Computing (SAC),
March 9-12, 2003, Melbourne, FL, {USA}},
pages = {282--287},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/952532.952591},
doi = {10.1145/952532.952591},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sac/AtallahL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/ApostolicoL02,
author = {Alberto Apostolico and
Stefano Lonardi},
title = {A speed-up for the commute between subword trees and DAWGs},
journal = {Inf. Process. Lett.},
volume = {83},
number = {3},
pages = {159--161},
year = {2002},
url = {https://doi.org/10.1016/S0020-0190(01)00327-1},
doi = {10.1016/S0020-0190(01)00327-1},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/ApostolicoL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/3dpvt/GuerraLZ02,
author = {Concettina Guerra and
Stefano Lonardi and
Giuseppe Zanotti},
title = {Analysis of Secondary Structure Elements of Proteins Using Indexing
Techniques},
booktitle = {1st International Symposium on 3D Data Processing Visualization and
Transmission {(3DPVT} 2002), 19-21 June 2002, Padova, Italy},
pages = {812--823},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/TDPVT.2002.1024166},
doi = {10.1109/TDPVT.2002.1024166},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/3dpvt/GuerraLZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/PatelKLL02,
author = {Pranav Patel and
Eamonn J. Keogh and
Jessica Lin and
Stefano Lonardi},
title = {Mining Motifs in Massive Time Series Databases},
booktitle = {Proceedings of the 2002 {IEEE} International Conference on Data Mining
{(ICDM} 2002), 9-12 December 2002, Maebashi City, Japan},
pages = {370--377},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/ICDM.2002.1183925},
doi = {10.1109/ICDM.2002.1183925},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/PatelKLL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/KeoghLC02,
author = {Eamonn J. Keogh and
Stefano Lonardi and
Bill Yuan{-}chi Chiu},
title = {Finding surprising patterns in a time series database in linear time
and space},
booktitle = {Proceedings of the Eighth {ACM} {SIGKDD} International Conference
on Knowledge Discovery and Data Mining, July 23-26, 2002, Edmonton,
Alberta, Canada},
pages = {550--556},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/775047.775128},
doi = {10.1145/775047.775128},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/KeoghLC02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ApostolicoBL02,
author = {Alberto Apostolico and
Mary Ellen Bock and
Stefano Lonardi},
editor = {Gene Myers and
Sridhar Hannenhalli and
David Sankoff and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Monotony of surprise and large-scale quest for unusual words},
booktitle = {Proceedings of the Sixth Annual International Conference on Computational
Biology, {RECOMB} 2002, Washington, DC, USA, April 18-21, 2002},
pages = {22--31},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/565196.565200},
doi = {10.1145/565196.565200},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ApostolicoBL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ApostolicoBLX00,
author = {Alberto Apostolico and
Mary Ellen Bock and
Stefano Lonardi and
Xuyan Xu},
title = {Efficient Detection of Unusual Words},
journal = {J. Comput. Biol.},
volume = {7},
number = {1-2},
pages = {71--94},
year = {2000},
url = {https://doi.org/10.1089/10665270050081397},
doi = {10.1089/10665270050081397},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/ApostolicoBLX00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pieee/ApostolicoL00,
author = {Alberto Apostolico and
Stefano Lonardi},
title = {Off-line compression by greedy textual substitution},
journal = {Proc. {IEEE}},
volume = {88},
number = {11},
pages = {1733--1744},
year = {2000},
url = {https://doi.org/10.1109/5.892709},
doi = {10.1109/5.892709},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pieee/ApostolicoL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/ApostolicoL00,
author = {Alberto Apostolico and
Stefano Lonardi},
title = {Compression of Biological Sequences by Greedy Off-Line Textual Substitution},
booktitle = {Data Compression Conference, {DCC} 2000, Snowbird, Utah, USA, March
28-30, 2000},
pages = {143--152},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/DCC.2000.838154},
doi = {10.1109/DCC.2000.838154},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/ApostolicoL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spic/LonardiS99,
author = {Stefano Lonardi and
Paolo Sommaruga},
title = {Fractal image approximation and orthogonal bases},
journal = {Signal Process. Image Commun.},
volume = {14},
number = {5},
pages = {413--423},
year = {1999},
url = {https://doi.org/10.1016/S0923-5965(98)00021-6},
doi = {10.1016/S0923-5965(98)00021-6},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/spic/LonardiS99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/ApostolicoBL99,
author = {Alberto Apostolico and
Mary Ellen Bock and
Stefano Lonardi},
title = {Linear Global Detectors of Redundant and Rare Substrings},
booktitle = {Data Compression Conference, {DCC} 1999, Snowbird, Utah, USA, March
29-31, 1999},
pages = {168--177},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/DCC.1999.755666},
doi = {10.1109/DCC.1999.755666},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/ApostolicoBL99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/ApostolicoL98,
author = {Alberto Apostolico and
Stefano Lonardi},
title = {Some Theory and Practice of Greedy Off-Line Textual Substitution},
booktitle = {Data Compression Conference, {DCC} 1998, Snowbird, Utah, USA, March
30 - April 1, 1998},
pages = {119--128},
publisher = {{IEEE} Computer Society},
year = {1998},
url = {https://doi.org/10.1109/DCC.1998.672138},
doi = {10.1109/DCC.1998.672138},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/ApostolicoL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
a service of 
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
last updated on 2024-03-07 01:39 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
