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ORCIDBibTeX records: Maryann E. Martone
@article{DBLP:journals/corr/abs-2401-00077,
author = {Erik C. Johnson and
Thinh T. Nguyen and
Benjamin K. Dichter and
Frank Zappulla and
Montgomery Kosma and
Kabilar Gunalan and
Yaroslav O. Halchenko and
Shay Q. Neufeld and
Michael Schirner and
Petra Ritter and
Maryann E. Martone and
Brock A. Wester and
Franco Pestilli and
Dimitri Yatsenko},
title = {A Maturity Model for Operations in Neuroscience Research},
journal = {CoRR},
volume = {abs/2401.00077},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2401.00077},
doi = {10.48550/ARXIV.2401.00077},
eprinttype = {arXiv},
eprint = {2401.00077},
timestamp = {Thu, 25 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2401-00077.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/Martone23,
author = {Maryann E. Martone},
title = {The past, present and future of neuroscience data sharing: a perspective
on the state of practices and infrastructure for {FAIR}},
journal = {Frontiers Neuroinformatics},
volume = {17},
year = {2023},
url = {https://doi.org/10.3389/fninf.2023.1276407},
doi = {10.3389/FNINF.2023.1276407},
timestamp = {Tue, 19 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fini/Martone23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BandrowskiPEGM23,
author = {Anita E. Bandrowski and
Mason Pairish and
Peter Eckmann and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {The Antibody Registry: ten years of registering antibodies},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {358--367},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac927},
doi = {10.1093/NAR/GKAC927},
timestamp = {Fri, 18 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BandrowskiPEGM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/SurlesZeiglerSGBBMGTHM22,
author = {Monique Surles{-}Zeigler and
Troy Sincomb and
Thomas H. Gillespie and
Bernard de Bono and
Jacqueline Bresnahan and
Gary M. Mawe and
Jeffrey S. Grethe and
Susan J. Tappan and
Maci L. Heal and
Maryann E. Martone},
title = {Extending and using anatomical vocabularies in the stimulating peripheral
activity to relieve conditions project},
journal = {Frontiers Neuroinformatics},
volume = {16},
year = {2022},
url = {https://doi.org/10.3389/fninf.2022.819198},
doi = {10.3389/FNINF.2022.819198},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/SurlesZeiglerSGBBMGTHM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/AbramsBDEGGGKHK22,
author = {Mathew Birdsall Abrams and
Jan G. Bjaalie and
Samir Das and
Gary F. Egan and
Satrajit S. Ghosh and
Wojtek James Goscinski and
Jeffrey S. Grethe and
Jeanette Hellgren Kotaleski and
Eric Tatt Wei Ho and
David N. Kennedy and
Linda J. Lanyon and
Trygve B. Leergaard and
Helen S. Mayberg and
Luciano Milanesi and
Roman Moucek and
Jean{-}Baptiste Poline and
Prasun Roy and
Stephen C. Strother and
Tong Boon Tang and
Paul H. E. Tiesinga and
Thomas Wachtler and
Daniel K. W{\'{o}}jcik and
Maryann E. Martone},
title = {A Standards Organization for Open and {FAIR} Neuroscience: the International
Neuroinformatics Coordinating Facility},
journal = {Neuroinformatics},
volume = {20},
number = {1},
pages = {25--36},
year = {2022},
url = {https://doi.org/10.1007/s12021-020-09509-0},
doi = {10.1007/S12021-020-09509-0},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/AbramsBDEGGGKHK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/AbramsBDEGGGKHK22a,
author = {Mathew Birdsall Abrams and
Jan G. Bjaalie and
Samir Das and
Gary F. Egan and
Satrajit S. Ghosh and
Wojtek James Goscinski and
Jeffrey S. Grethe and
Jeanette Hellgren Kotaleski and
Eric Tatt Wei Ho and
David N. Kennedy and
Linda J. Lanyon and
Trygve B. Leergaard and
Helen S. Mayberg and
Luciano Milanesi and
Roman Moucek and
Jean{-}Baptiste Poline and
Prasun Roy and
Stephen C. Strother and
Tong Boon Tang and
Paul H. E. Tiesinga and
Thomas Wachtler and
Daniel K. W{\'{o}}jcik and
Maryann E. Martone},
title = {Correction to: {A} Standards Organization for Open and {FAIR} Neuroscience:
the International Neuroinformatics Coordinating Facility},
journal = {Neuroinformatics},
volume = {20},
number = {1},
pages = {37--38},
year = {2022},
url = {https://doi.org/10.1007/s12021-021-09522-x},
doi = {10.1007/S12021-021-09522-X},
timestamp = {Tue, 18 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/AbramsBDEGGGKHK22a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/Torres-EspinACH22,
author = {Abel Torres{-}Espin and
Carlos A. Almeida and
Austin Chou and
J. Russell Huie and
Michael Chiu and
Romana Vavrek and
Jeff Sacramento and
Michael B. Orr and
John C. Gensel and
Jeffrey S. Grethe and
Maryann E. Martone and
Karim Fouad and
Adam R. Ferguson and
Warren Alilain and
Mark Bacon and
Nicholas Batty and
Michael Beattie and
Jacqueline Bresnahan and
Emily Burnside and
Sarah Busch and
Randall Carpenter and
Isaac Francos Quijorna and
Xiaohui Guo and
Agnes Haggerty and
Sarah Haroon and
Jack Harris and
Lyn Jakeman and
Linda Jones and
Naomi Kleitman and
Timothy Kopper and
Michael Lane and
Francisco Magana and
David Magnuson and
Ines Maldonado and
Verena May and
Katelyn McFarlane and
Kazuhito Morioka and
Martin Oudega and
Philip Leo Pascual and
Jean{-}Baptiste Poline and
Ephron S. Rosenzweig and
Emma Schmidt and
Wolfram Tetzlaff and
Lana Zholudeva},
title = {Promoting {FAIR} Data Through Community-driven Agile Design: the Open
Data Commons for Spinal Cord Injury (odc-sci.org)},
journal = {Neuroinformatics},
volume = {20},
number = {1},
pages = {203--219},
year = {2022},
url = {https://doi.org/10.1007/s12021-021-09533-8},
doi = {10.1007/S12021-021-09533-8},
timestamp = {Tue, 06 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/Torres-EspinACH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/PolineKSAEFGHTP22,
author = {Jean{-}Baptiste Poline and
David N. Kennedy and
Friedrich T. Sommer and
Giorgio A. Ascoli and
David C. Van Essen and
Adam R. Ferguson and
Jeffrey S. Grethe and
Michael Hawrylycz and
Paul M. Thompson and
Russell A. Poldrack and
Satrajit S. Ghosh and
David B. Keator and
Thomas L. Athey and
Joshua T. Vogelstein and
Helen S. Mayberg and
Maryann E. Martone},
title = {Is Neuroscience FAIR? {A} Call for Collaborative Standardisation of
Neuroscience Data},
journal = {Neuroinformatics},
volume = {20},
number = {2},
pages = {507--512},
year = {2022},
url = {https://doi.org/10.1007/s12021-021-09557-0},
doi = {10.1007/S12021-021-09557-0},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/PolineKSAEFGHTP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/GillespieTSMH22,
author = {Thomas H. Gillespie and
Shreejoy J. Tripathy and
Mohameth{-}Fran{\c{c}}ois Sy and
Maryann E. Martone and
Sean L. Hill},
title = {The Neuron Phenotype Ontology: {A} {FAIR} Approach to Proposing and
Classifying Neuronal Types},
journal = {Neuroinformatics},
volume = {20},
number = {3},
pages = {793--809},
year = {2022},
url = {https://doi.org/10.1007/s12021-022-09566-7},
doi = {10.1007/S12021-022-09566-7},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/GillespieTSMH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HsuCPLWLBOGM21,
author = {Chun{-}Nan Hsu and
Chia{-}Hui Chang and
Thamolwan Poopradubsil and
Amanda Lo and
Karen A. William and
Ko{-}Wei Lin and
Anita E. Bandrowski and
Ibrahim Burak {\"{O}}zyurt and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {Antibody Watch: Text mining antibody specificity from the literature},
journal = {PLoS Comput. Biol.},
volume = {17},
number = {5},
year = {2021},
url = {https://doi.org/10.1371/journal.pcbi.1008967},
doi = {10.1371/JOURNAL.PCBI.1008967},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/HsuCPLWLBOGM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/KatzHCFM20,
author = {Daniel S. Katz and
Neil P. Chue Hong and
Tim Clark and
Martin Fenner and
Maryann E. Martone},
title = {Software and Data Citation},
journal = {Comput. Sci. Eng.},
volume = {22},
number = {2},
pages = {4--7},
year = {2020},
url = {https://doi.org/10.1109/MCSE.2020.2969730},
doi = {10.1109/MCSE.2020.2969730},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cse/KatzHCFM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/HsuBGULOGM20,
author = {Chun{-}Nan Hsu and
Anita E. Bandrowski and
Tom Gillespie and
Jon Udell and
Ko{-}Wei Lin and
Ibrahim Burak {\"{O}}zyurt and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {Comparing the Use of Research Resource Identifiers and Natural Language
Processing for Citation of Databases, Software, and Other Digital
Artifacts},
journal = {Comput. Sci. Eng.},
volume = {22},
number = {2},
pages = {22--32},
year = {2020},
url = {https://doi.org/10.1109/MCSE.2019.2952838},
doi = {10.1109/MCSE.2019.2952838},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cse/HsuBGULOGM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-01937,
author = {Chun{-}Nan Hsu and
Chia{-}Hui Chang and
Thamolwan Poopradubsil and
Amanda Lo and
Karen A. William and
Ko{-}Wei Lin and
Anita E. Bandrowski and
Ibrahim Burak {\"{O}}zyurt and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {Antibody Watch: Text Mining Antibody Specificity from the Literature},
journal = {CoRR},
volume = {abs/2008.01937},
year = {2020},
url = {https://arxiv.org/abs/2008.01937},
eprinttype = {arXiv},
eprint = {2008.01937},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2008-01937.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/KennedyABCGGGGH19,
author = {David N. Kennedy and
Sanu Ann Abraham and
Julianna F. Bates and
Albert Crowley and
Satrajit S. Ghosh and
Tom Gillespie and
Mathias Goncalves and
Jeffrey S. Grethe and
Yaroslav O. Halchenko and
Michael Hanke and
Christian Haselgrove and
Steven M. Hodge and
Dorota Jarecka and
Jakub Kaczmarzyk and
David B. Keator and
Kyle Meyer and
Maryann E. Martone and
Smruti Padhy and
Jean{-}Baptiste Poline and
Nina Preuss and
Troy Sincomb and
Matt Travers},
title = {Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging},
journal = {Frontiers Neuroinformatics},
volume = {13},
pages = {1},
year = {2019},
url = {https://doi.org/10.3389/fninf.2019.00001},
doi = {10.3389/FNINF.2019.00001},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fini/KennedyABCGGGGH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ro/BandrowskiGSPGM19,
author = {Anita E. Bandrowski and
Tom Gillespie and
Monique Surles{-}Zeigler and
Gabrielle Pine and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {How BIDs and BIDs validator has informed the data aggregation needs
of the Stimulating Peripheral Activity to Relieve Conditions, SPARC,
consortium},
booktitle = {Proceedings of Workshop on Research Objects (RO2019), San Diego, CA,
USA, September 24, 2019},
year = {2019},
url = {https://doi.org/10.5281/zenodo.3265460},
doi = {10.5281/ZENODO.3265460},
timestamp = {Wed, 26 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ro/BandrowskiGSPGM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ro/BandrowskiGM18,
author = {Anita E. Bandrowski and
Tom Gillespie and
Maryann E. Martone},
title = {Research Resource IDentifiers for Key Biological Resources},
booktitle = {Proceedings of Workshop on Research Objects (RO2018), Amsterdam, The
Netherlands, October 29, 2018},
year = {2018},
url = {https://doi.org/10.5281/zenodo.1412731},
doi = {10.5281/ZENODO.1412731},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ro/BandrowskiGM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/brain/2017,
editor = {Yi Zeng and
Yong He and
Jeanette Hellgren Kotaleski and
Maryann E. Martone and
Bo Xu and
Hanchuan Peng and
Qingming Luo},
title = {Brain Informatics - International Conference, {BI} 2017, Beijing,
China, November 16-18, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10654},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-70772-3},
doi = {10.1007/978-3-319-70772-3},
isbn = {978-3-319-70771-6},
timestamp = {Wed, 09 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/brain/2017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerjpre/HsuBGM17,
author = {Chun{-}Nan Hsu and
Anita E. Bandrowski and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {Assessing value of biomedical digital repositories},
journal = {PeerJ Prepr.},
volume = {5},
pages = {e2688},
year = {2017},
url = {https://doi.org/10.7287/peerj.preprints.2688v1},
doi = {10.7287/PEERJ.PREPRINTS.2688V1},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/peerjpre/HsuBGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/BandrowskiBGHKH16,
author = {Anita E. Bandrowski and
Matthew H. Brush and
Jeffrey S. Grethe and
Melissa A. Haendel and
David N. Kennedy and
Sean L. Hill and
Patrick R. Hof and
Maryann E. Martone and
Maaike Pols and
Serena S. Tan and
Nicole L. Washington and
Elena V. Zudilova{-}Seinstra and
Nicole A. Vasilevsky},
title = {The Resource Identification Initiative: {A} Cultural Shift in Publishing},
journal = {Neuroinformatics},
volume = {14},
number = {2},
pages = {169--182},
year = {2016},
url = {https://doi.org/10.1007/s12021-015-9284-3},
doi = {10.1007/S12021-015-9284-3},
timestamp = {Thu, 16 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/BandrowskiBGHKH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/SivagnanamMYABMC15,
author = {Subhashini Sivagnanam and
Amit Majumdar and
Kenneth Yoshimoto and
Vadim Astakhov and
Anita E. Bandrowski and
Maryann E. Martone and
Nicholas T. Carnevale},
title = {Early experiences in developing and managing the neuroscience gateway},
journal = {Concurr. Comput. Pract. Exp.},
volume = {27},
number = {2},
pages = {473--488},
year = {2015},
url = {https://doi.org/10.1002/cpe.3283},
doi = {10.1002/CPE.3283},
timestamp = {Thu, 18 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/concurrency/SivagnanamMYABMC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/BandrowskiBGHKHHMPTWZV15,
author = {Anita E. Bandrowski and
Matthew H. Brush and
Jeffrey S. Grethe and
Melissa A. Haendel and
David N. Kennedy and
Sean L. Hill and
Patrick R. Hof and
Maryann E. Martone and
Maaike Pols and
Serena S. Tan and
Nicole L. Washington and
Elena V. Zudilova{-}Seinstra and
Nicole A. Vasilevsky},
title = {The Resource Identification Initiative: {A} cultural shift in publishing},
journal = {F1000Research},
volume = {4},
pages = {134},
year = {2015},
url = {https://doi.org/10.12688/f1000research.6555.1},
doi = {10.12688/F1000RESEARCH.6555.1},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/f1000research/BandrowskiBGHKHHMPTWZV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/NicholsMDNMTRB14,
author = {B. Nolan Nichols and
Jos{\'{e}} L. V. Mejino Jr. and
Landon Detwiler and
Trond T. Nilsen and
Maryann E. Martone and
Jessica A. Turner and
Daniel L. Rubin and
James F. Brinkley},
title = {Neuroanatomical domain of the foundational model of anatomy ontology},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {1},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-1},
doi = {10.1186/2041-1480-5-1},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/NicholsMDNMTRB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ChaudhriEGGMWY14,
author = {Vinay K. Chaudhri and
Daniel Elenius and
Andrew Goldenkranz and
Allison Gong and
Maryann E. Martone and
William Webb and
Neil Yorke{-}Smith},
title = {Comparative analysis of knowledge representation and reasoning requirements
across a range of life sciences textbooks},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {51},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-51},
doi = {10.1186/2041-1480-5-51},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ChaudhriEGGMWY14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/HastingsFSJPLBITM14,
author = {Janna Hastings and
Gwen A. Frishkoff and
Barry Smith and
Mark Jensen and
Russell A. Poldrack and
Jane Lomax and
Anita E. Bandrowski and
Fahim T. Imam and
Jessica A. Turner and
Maryann E. Martone},
title = {Interdisciplinary perspectives on the development, integration, and
application of cognitive ontologies},
journal = {Frontiers Neuroinformatics},
volume = {8},
pages = {62},
year = {2014},
url = {https://doi.org/10.3389/fninf.2014.00062},
doi = {10.3389/FNINF.2014.00062},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/HastingsFSJPLBITM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isu/KenneallyIMMT14,
author = {Christopher Kenneally and
October Ivins and
Maryann E. Martone and
Britt Mueller and
William Trippe},
title = {Re-envisioning the business of information: Policies, practices and
procedures},
journal = {Inf. Serv. Use},
volume = {34},
number = {1-2},
pages = {75--84},
year = {2014},
url = {https://doi.org/10.3233/ISU-140729},
doi = {10.3233/ISU-140729},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isu/KenneallyIMMT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/TaselHMPM14,
author = {Serdar F. Tasel and
Reza Hassanpour and
Erkan U. Mumcuoglu and
Guy C. Perkins and
Maryann E. Martone},
editor = {S{\'{e}}bastien Ourselin and
Martin A. Styner},
title = {Automatic detection of mitochondria from electron microscope tomography
images: a curve fitting approach},
booktitle = {Medical Imaging 2014: Image Processing, San Diego, California, USA,
February 16-18, 2014},
series = {{SPIE} Proceedings},
volume = {9034},
pages = {903449},
publisher = {{SPIE}},
year = {2014},
url = {https://doi.org/10.1117/12.2043517},
doi = {10.1117/12.2043517},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/TaselHMPM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/Martone14,
author = {Maryann E. Martone},
editor = {Dieter Jaeger and
Ranu Jung},
title = {Cell Centered Database},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_487-1},
doi = {10.1007/978-1-4614-7320-6\_487-1},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/Martone14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/MartoneB14,
author = {Maryann E. Martone and
Anita E. Bandrowski},
editor = {Dieter Jaeger and
Ranu Jung},
title = {Neuroscience Information Framework {(NIF)}},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_459-1},
doi = {10.1007/978-1-4614-7320-6\_459-1},
timestamp = {Fri, 16 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/MartoneB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/RoncagliaMHBFIDML13,
author = {Paola Roncaglia and
Maryann E. Martone and
David P. Hill and
Tanya Z. Berardini and
Rebecca E. Foulger and
Fahim T. Imam and
Harold J. Drabkin and
Christopher J. Mungall and
Jane Lomax},
title = {The Gene Ontology {(GO)} Cellular Component Ontology: integration
with {SAO} (Subcellular Anatomy Ontology) and other recent developments},
journal = {J. Biomed. Semant.},
volume = {4},
pages = {20},
year = {2013},
url = {https://doi.org/10.1186/2041-1480-4-20},
doi = {10.1186/2041-1480-4-20},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/RoncagliaMHBFIDML13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/MaynardMLIM13,
author = {Sarah Maynard and
Christopher J. Mungall and
Suzanna E. Lewis and
Fahim T. Imam and
Maryann E. Martone},
title = {A knowledge based approach to matching human neurodegenerative disease
and animal models},
journal = {Frontiers Neuroinformatics},
volume = {7},
pages = {7},
year = {2013},
url = {https://doi.org/10.3389/fninf.2013.00007},
doi = {10.3389/FNINF.2013.00007},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/MaynardMLIM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/LarsonM13,
author = {Stephen D. Larson and
Maryann E. Martone},
title = {NeuroLex.org: an online framework for neuroscience knowledge},
journal = {Frontiers Neuroinformatics},
volume = {7},
pages = {18},
year = {2013},
url = {https://doi.org/10.3389/fninf.2013.00018},
doi = {10.3389/FNINF.2013.00018},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/LarsonM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/OrloffIMEK13,
author = {David N. Orloff and
Janet H. Iwasa and
Maryann E. Martone and
Mark H. Ellisman and
Caroline M. Kane},
title = {The cell: an image library-CCDB: a curated repository of microscopy
data},
journal = {Nucleic Acids Res.},
volume = {41},
number = {Database-Issue},
pages = {1241--1250},
year = {2013},
url = {https://doi.org/10.1093/nar/gks1257},
doi = {10.1093/NAR/GKS1257},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/OrloffIMEK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/MartoneA13,
author = {Maryann E. Martone and
Giorgio A. Ascoli},
title = {Connecting Connectomes},
journal = {Neuroinformatics},
volume = {11},
number = {4},
pages = {389--392},
year = {2013},
url = {https://doi.org/10.1007/s12021-013-9207-0},
doi = {10.1007/S12021-013-9207-0},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/MartoneA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwsg/SivagnanamMYABMC13,
author = {Subhashini Sivagnanam and
Amit Majumdar and
Kenneth Yoshimoto and
Vadim Astakhov and
Anita E. Bandrowski and
Maryann E. Martone and
Nicholas T. Carnevale},
editor = {Tam{\'{a}}s Kiss},
title = {Introducing The Neuroscience Gateway},
booktitle = {Proceedings of the 5th International Workshop on Science Gateways,
Zurich, Switzerland, 3-5 June, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {993},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-993/paper10.pdf},
timestamp = {Thu, 18 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iwsg/SivagnanamMYABMC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/GuptaBCQGM13,
author = {Amarnath Gupta and
Anita E. Bandrowski and
Christopher Condit and
Xufei Qian and
Jeffrey S. Grethe and
Maryann E. Martone},
editor = {Alex Szalay and
Tamas Budavari and
Magdalena Balazinska and
Alexandra Meliou and
Ahmet Sacan},
title = {Semantic query reformulation: the {NIF} experience},
booktitle = {Conference on Scientific and Statistical Database Management, {SSDBM}
'13, Baltimore, MD, USA, July 29 - 31, 2013},
pages = {35:1--35:4},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2484838.2484839},
doi = {10.1145/2484838.2484839},
timestamp = {Fri, 16 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ssdbm/GuptaBCQGM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/SivagnanamAYCMMB13,
author = {Subhashini Sivagnanam and
Vadim Astakhov and
Kenneth Yoshimoto and
Ted Carnevale and
Maryann E. Martone and
Amitava Majumdar and
Anita E. Bandrowski},
editor = {Nancy Wilkins{-}Diehr},
title = {A neuroscience gateway: software and implementation},
booktitle = {Extreme Science and Engineering Discovery Environment: Gateway to
Discovery, XSEDE13, San Diego, CA, {USA} - July 22 - 25, 2013},
pages = {31:1--31:3},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2484762.2484816},
doi = {10.1145/2484762.2484816},
timestamp = {Thu, 18 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/xsede/SivagnanamAYCMMB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BandrowskiCLMSCCMWAGM12,
author = {Anita E. Bandrowski and
Jonathan Cachat and
Yuling Li and
Hans{-}Michael M{\"{u}}ller and
Paul W. Sternberg and
Paolo Ciccarese and
Tim Clark and
Luis N. Marenco and
Rixin Wang and
Vadim Astakhov and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {A hybrid human and machine resource curation pipeline for the Neuroscience
Information Framework},
journal = {Database J. Biol. Databases Curation},
volume = {2012},
year = {2012},
url = {https://doi.org/10.1093/database/bas005},
doi = {10.1093/DATABASE/BAS005},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BandrowskiCLMSCCMWAGM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GiulyME12,
author = {Richard J. Giuly and
Maryann E. Martone and
Mark H. Ellisman},
title = {Method: automatic segmentation of mitochondria utilizing patch classification,
contour pair classification, and automatically seeded level sets},
journal = {{BMC} Bioinform.},
volume = {13},
pages = {29},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-29},
doi = {10.1186/1471-2105-13-29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GiulyME12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/HamiltonSMA12,
author = {David J. Hamilton and
Gordon M. Shepherd and
Maryann E. Martone and
Giorgio A. Ascoli},
title = {An ontological approach to describing neurons and their relationships},
journal = {Frontiers Neuroinformatics},
volume = {6},
pages = {15},
year = {2012},
url = {https://doi.org/10.3389/fninf.2012.00015},
doi = {10.3389/FNINF.2012.00015},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/HamiltonSMA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fois/ImamLBGGM12,
author = {Fahim T. Imam and
Stephen D. Larson and
Anita E. Bandrowski and
Jeffrey S. Grethe and
Amarnath Gupta and
Maryann E. Martone},
editor = {Maureen Donnelly and
Giancarlo Guizzardi},
title = {Maturation of Neuroscience Information Framework: An Ontology Driven
Information System for Neuroscience},
booktitle = {Formal Ontology in Information Systems - Proceedings of the Seventh
International Conference, {FOIS} 2012, Gray, Austria, July 24-27,
2012},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {239},
pages = {15--28},
publisher = {{IOS} Press},
year = {2012},
url = {https://doi.org/10.3233/978-1-61499-084-0-15},
doi = {10.3233/978-1-61499-084-0-15},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/fois/ImamLBGGM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ihi/WaardAMSS12,
author = {Anita de Waard and
Sophia Ananiadou and
Maryann E. Martone and
{\'{A}}gnes S{\'{a}}ndor and
Hagit Shatkay},
editor = {Gang Luo and
Jiming Liu and
Christopher C. Yang},
title = {Detecting and using document structure in scientific text},
booktitle = {{ACM} International Health Informatics Symposium, {IHI} '12, Miami,
FL, USA, January 28-30, 2012},
pages = {883--884},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2110363.2110482},
doi = {10.1145/2110363.2110482},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ihi/WaardAMSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/procedia/AstakhovBGKGBMRPTWHKME12,
author = {Vadim Astakhov and
Anita E. Bandrowski and
Amarnath Gupta and
A. W. Kulungowski and
Jeffrey S. Grethe and
James Bouwer and
T. Molin and
V. Rowley and
S. Penticoff and
Masako Terada and
W. Wong and
Hiroyuki Hakozaki and
O. Kwon and
Maryann E. Martone and
Mark H. Ellisman},
editor = {Hesham H. Ali and
Yong Shi and
Deepak Khazanchi and
Michael Lees and
G. Dick van Albada and
Jack J. Dongarra and
Peter M. A. Sloot},
title = {Prototype of Kepler Processing Workflows For Microscopy And Neuroinformatics},
booktitle = {Proceedings of the International Conference on Computational Science,
{ICCS} 2012, Omaha, Nebraska, USA, 4-6 June, 2012},
series = {Procedia Computer Science},
volume = {9},
pages = {1595--1603},
publisher = {Elsevier},
year = {2012},
url = {https://doi.org/10.1016/j.procs.2012.04.175},
doi = {10.1016/J.PROCS.2012.04.175},
timestamp = {Thu, 08 Jul 2021 16:04:01 +0200},
biburl = {https://dblp.org/rec/journals/procedia/AstakhovBGKGBMRPTWHKME12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2011,
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-833},
urn = {urn:nbn:de:0074-833-7},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HawrylyczBBHJMNLLNPRVZB11,
author = {Michael Hawrylycz and
Richard A. Baldock and
Albert Burger and
Tsutomu Hashikawa and
G. Allan Johnson and
Maryann E. Martone and
Lydia Ng and
Christopher Lau and
Stephen D. Larson and
Jonathan Nissanov and
Luis Puelles and
Seth Ruffins and
Fons J. Verbeek and
Ilya Zaslavsky and
Jyl Boline},
title = {Digital Atlasing and Standardization in the Mouse Brain},
journal = {PLoS Comput. Biol.},
volume = {7},
number = {2},
year = {2011},
url = {https://doi.org/10.1371/journal.pcbi.1001065},
doi = {10.1371/JOURNAL.PCBI.1001065},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HawrylyczBBHJMNLLNPRVZB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ImamLGGBM11,
author = {Fahim T. Imam and
Stephen D. Larson and
Jeffrey S. Grethe and
Amarnath Gupta and
Anita E. Bandrowski and
Maryann E. Martone},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{NIFSTD} and NeuroLex: Comprehensive Neuroscience Ontology Development
Based on Multiple Biomedical Ontologies and Community Involvement},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper67.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ImamLGGBM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MungallABCCCCDEEGKILMMTTTTWH11,
author = {Chris Mungall and
David Anderson and
Anita E. Bandrowski and
Brian A. Canada and
Andrew Chatr{-}aryamontri and
Keith C. Cheng and
P. Michael Conn and
Kara Dolinski and
Mark H. Ellisman and
Janan T. Eppig and
Jeffrey S. Grethe and
Joseph W. Kemnitz and
Shawn Iadonato and
Stephen D. Larson and
Charles Magness and
Maryann E. Martone and
Mike Tyers and
Carlo Torniai and
Olga G. Troyanskaya and
Judith Turner and
Monte Westerfield and
Melissa A. Haendel},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {An Ontology-Based Approach to Linking Model Organisms and Resources
to Human Diseases},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper43.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MungallABCCCCDEEGKILMMTTTTWH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cogsr/KolaHLRGM10,
author = {Jay (Subbarao) Kola and
Jonathan Harris and
Stephen M. Lawrie and
Alan L. Rector and
Carole A. Goble and
Maryann E. Martone},
title = {Towards an ontology for psychosis},
journal = {Cogn. Syst. Res.},
volume = {11},
number = {1},
pages = {42--52},
year = {2010},
url = {https://doi.org/10.1016/j.cogsys.2008.08.005},
doi = {10.1016/J.COGSYS.2008.08.005},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cogsr/KolaHLRGM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/TurnerMBDLMR10,
author = {Jessica A. Turner and
Jos{\'{e}} L. V. Mejino Jr. and
James F. Brinkley and
Landon T. Detwiler and
Hyo Jong Lee and
Maryann E. Martone and
Daniel L. Rubin},
title = {Application of neuroanatomical ontologies for neuroimaging data annotation},
journal = {Frontiers Neuroinformatics},
volume = {4},
pages = {10},
year = {2010},
url = {https://doi.org/10.3389/fninf.2010.00010},
doi = {10.3389/FNINF.2010.00010},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/TurnerMBDLMR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ivs/KimSCSM10,
author = {Han Suk Kim and
J{\"{u}}rgen P. Schulze and
Angela C. Cone and
Gina E. Sosinsky and
Maryann E. Martone},
title = {Dimensionality reduction on multi-dimensional transfer functions for
multi-channel volume data sets},
journal = {Inf. Vis.},
volume = {9},
number = {3},
pages = {167--180},
year = {2010},
url = {https://doi.org/10.1057/ivs.2010.6},
doi = {10.1057/IVS.2010.6},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ivs/KimSCSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vda/KimSCSM10,
author = {Han Suk Kim and
J{\"{u}}rgen P. Schulze and
Angela C. Cone and
Gina E. Sosinsky and
Maryann E. Martone},
editor = {Jinah Park and
Ming C. Hao and
Pak Chung Wong and
Chaomei Chen},
title = {Multichannel transfer function with dimensionality reduction},
booktitle = {Visualization and Data Analysis, {VDA} 2010, San Jose, CA, USA, January
18-19, 2010},
series = {{SPIE} Proceedings},
volume = {7530},
pages = {75300},
publisher = {{SPIE}},
year = {2010},
url = {https://doi.org/10.1117/12.839526},
doi = {10.1117/12.839526},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/vda/KimSCSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/YoungTTVAGGMDM09,
author = {Lynn Young and
Samson W. Tu and
Lakshika Tennakoon and
David Vismer and
Vadim Astakhov and
Amarnath Gupta and
Jeffrey S. Grethe and
Maryann E. Martone and
Amar K. Das and
Matthew J. McAuliffe},
title = {Ontology driven data integration for autism research},
booktitle = {Proceedings of the Twenty-Second {IEEE} International Symposium on
Computer-Based Medical Systems, August 3-4, 2009, Albuquerque, New
Mexico, {USA}},
pages = {1--7},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CBMS.2009.5255362},
doi = {10.1109/CBMS.2009.5255362},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/YoungTTVAGGMDM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/LarsonMIM09,
author = {Stephen D. Larson and
Sarah Maynard and
Fahim T. Imam and
Maryann E. Martone},
editor = {M. Scott Marshall and
Albert Burger and
Paolo Romano and
Adrian Paschke and
Andrea Splendiani},
title = {NeuroLex.org - {A} semantic wiki for neuroinformatics based on the
{NIF} Standard Ontology},
booktitle = {Proceedings of the Workshop on Semantic Web Applications and Tools
for Life Sciences, Amsterdam, The Netherlands, November 20, 2009},
series = {{CEUR} Workshop Proceedings},
volume = {559},
publisher = {CEUR-WS.org},
year = {2009},
url = {https://ceur-ws.org/Vol-559/Demo1.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/LarsonMIM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/GardnerAABBDGGGGHKMMMMRSSEW08,
author = {Daniel Gardner and
Huda Akil and
Giorgio A. Ascoli and
Douglas M. Bowden and
William J. Bug and
Duncan E. Donohue and
David H. Goldberg and
Bernice Grafstein and
Jeffrey S. Grethe and
Amarnath Gupta and
Maryam Halavi and
David N. Kennedy and
Luis N. Marenco and
Maryann E. Martone and
Perry L. Miller and
Hans{-}Michael M{\"{u}}ller and
Adrian Robert and
Gordon M. Shepherd and
Paul W. Sternberg and
David C. Van Essen and
Robert W. Williams},
title = {The Neuroscience Information Framework: {A} Data and Knowledge Environment
for Neuroscience},
journal = {Neuroinformatics},
volume = {6},
number = {3},
pages = {149--160},
year = {2008},
url = {https://doi.org/10.1007/s12021-008-9024-z},
doi = {10.1007/S12021-008-9024-Z},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/GardnerAABBDGGGGHKMMMMRSSEW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/BugAGGFLLRSTM08,
author = {William J. Bug and
Giorgio A. Ascoli and
Jeffrey S. Grethe and
Amarnath Gupta and
Christine Fennema{-}Notestine and
Angela R. Laird and
Stephen D. Larson and
Daniel L. Rubin and
Gordon M. Shepherd and
Jessica A. Turner and
Maryann E. Martone},
title = {The {NIFSTD} and BIRNLex Vocabularies: Building Comprehensive Ontologies
for Neuroscience},
journal = {Neuroinformatics},
volume = {6},
number = {3},
pages = {175--194},
year = {2008},
url = {https://doi.org/10.1007/s12021-008-9032-z},
doi = {10.1007/S12021-008-9032-Z},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/BugAGGFLLRSTM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/GuptaBMQCRMMSGASSM08,
author = {Amarnath Gupta and
William J. Bug and
Luis N. Marenco and
Xufei Qian and
Christopher Condit and
Arun Rangarajan and
Hans{-}Michael M{\"{u}}ller and
Perry L. Miller and
Brian Sanders and
Jeffrey S. Grethe and
Vadim Astakhov and
Gordon M. Shepherd and
Paul W. Sternberg and
Maryann E. Martone},
title = {Federated Access to Heterogeneous Information Resources in the Neuroscience
Information Framework {(NIF)}},
journal = {Neuroinformatics},
volume = {6},
number = {3},
pages = {205--217},
year = {2008},
url = {https://doi.org/10.1007/s12021-008-9033-y},
doi = {10.1007/S12021-008-9033-Y},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/GuptaBMQCRMMSGASSM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/MarencoAMSM08,
author = {Luis N. Marenco and
Giorgio A. Ascoli and
Maryann E. Martone and
Gordon M. Shepherd and
Perry L. Miller},
title = {The {NIF} LinkOut Broker: {A} Web Resource to Facilitate Federated
Data Integration using {NCBI} Identifiers},
journal = {Neuroinformatics},
volume = {6},
number = {3},
pages = {219--227},
year = {2008},
url = {https://doi.org/10.1007/s12021-008-9025-y},
doi = {10.1007/S12021-008-9025-Y},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/MarencoAMSM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/MarencoLMSSM08,
author = {Luis N. Marenco and
Yuli Li and
Maryann E. Martone and
Paul W. Sternberg and
Gordon M. Shepherd and
Perry L. Miller},
title = {Issues in the Design of a Pilot Concept-Based Query Interface for
the Neuroinformatics Information Framework},
journal = {Neuroinformatics},
volume = {6},
number = {3},
pages = {229--239},
year = {2008},
url = {https://doi.org/10.1007/s12021-008-9035-9},
doi = {10.1007/S12021-008-9035-9},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/MarencoLMSSM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/KumarRKCPCLMS08,
author = {Vijay S. Kumar and
Benjamin Rutt and
Tahsin M. Kur{\c{c}} and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek and
Tony C. Pan and
Sunny K. Chow and
Stephan Lamont and
Maryann E. Martone and
Joel H. Saltz},
title = {Large-Scale Biomedical Image Analysis in Grid Environments},
journal = {{IEEE} Trans. Inf. Technol. Biomed.},
volume = {12},
number = {2},
pages = {154--161},
year = {2008},
url = {https://doi.org/10.1109/TITB.2007.908466},
doi = {10.1109/TITB.2007.908466},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/titb/KumarRKCPCLMS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/cb/MartoneZGMTWFLE08,
author = {Maryann E. Martone and
Ilya Zaslavsky and
Amarnath Gupta and
Asif Memon and
Joshua Tran and
Willy Wong and
Lisa Fong and
Stephen D. Larson and
Mark H. Ellisman},
editor = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {The Smart Atlas: Spatial and Semantic Strategies for Multiscale Integration
of Brain Data},
booktitle = {Anatomy Ontologies for Bioinformatics, Principles and Practice},
series = {Computational Biology},
volume = {6},
pages = {267--286},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-1-84628-885-2\_13},
doi = {10.1007/978-1-84628-885-2\_13},
timestamp = {Thu, 13 Jun 2019 09:41:49 +0200},
biburl = {https://dblp.org/rec/series/cb/MartoneZGMTWFLE08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/LarsonFGCBM07,
author = {Stephen D. Larson and
Lisa Fong and
Amarnath Gupta and
Christopher Condit and
William J. Bug and
Maryann E. Martone},
title = {A formal ontology of subcellular neuroanatomy},
journal = {Frontiers Neuroinformatics},
volume = {1},
pages = {3},
year = {2007},
url = {https://doi.org/10.3389/neuro.11.003.2007},
doi = {10.3389/NEURO.11.003.2007},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/LarsonFGCBM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/GuptaLCGFCM07,
author = {Amarnath Gupta and
Stephen D. Larson and
Christopher Condit and
Sandeep Gupta and
Lisa Fong and
Li Chen and
Maryann E. Martone},
editor = {Jean{-}Luc Hainaut and
Elke A. Rundensteiner and
Markus Kirchberg and
Michela Bertolotto and
Mathias Brochhausen and
Yi{-}Ping Phoebe Chen and
Samira Si{-}Said Cherfi and
Martin Doerr and
Hyoil Han and
Sven Hartmann and
Jeffrey Parsons and
Geert Poels and
Colette Rolland and
Juan Trujillo and
Eric S. K. Yu and
Esteban Zim{\'{a}}nyi},
title = {Toward an Ontological Database for Subcellular Neuroanatomy},
booktitle = {Advances in Conceptual Modeling - Foundations and Applications, {ER}
2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM,SeCoGIS, Auckland,
New Zealand, November 5-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4802},
pages = {64--73},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-76292-8\_8},
doi = {10.1007/978-3-540-76292-8\_8},
timestamp = {Wed, 13 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/er/GuptaLCGFCM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthgrid/UrePMPLLJBPLRBM07,
author = {Jenny Ure and
Rob Procter and
Maryann E. Martone and
David Porteous and
Sharon Lloyd and
Stephen M. Lawrie and
Dominic Job and
Richard A. Baldock and
Alistair Philp and
Dave Liewald and
Frank Rakebrandt and
Alan Blaikie and
Clare McKay and
Stuart Anderson and
John D. Ainsworth and
Jano I. van Hemert and
Ignacio Blanquer and
Richard O. Sinnott and
Christian Barillot and
Bernard Gibaud and
Alan R. Williams and
Mark Hartswood and
Paul Watson and
Leslie Smith and
Albert Burger and
Jessie B. Kennedy and
Horacio Gonz{\'{a}}lez{-}V{\'{e}}lez and
Robert Stevens and
{\'{O}}scar Corcho and
Robin Morton and
Pamela Linksted and
Mylene Deschenes and
Mark M. McGilchrist and
Paul Johnson and
Alex Voss and
Renate Gertz and
Joanna M. Wardlaw},
editor = {Nicolas Jacq and
Henning M{\"{u}}ller and
Ignacio Blanquer and
Yannick Legr{\'{e}} and
Vincent Breton and
Dominique Hausser and
Vicente Hern{\'{a}}ndez and
Tony Solomonides and
Martin Hofmann{-}Apitius},
title = {Data Integration in eHealth: {A} Domain/Disease Specific Roadmap},
booktitle = {From Genes to Personalized HealthCare: Grid Solutions for the Life
Sciences - Proceedings of HealthGrid 2007, Geneva, Switzerland, April
24-27, 2007},
series = {Studies in Health Technology and Informatics},
volume = {126},
pages = {144--153},
publisher = {{IOS} Press},
year = {2007},
url = {http://www.booksonline.iospress.nl/Content/View.aspx?piid=5561},
timestamp = {Mon, 26 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/healthgrid/UrePMPLLJBPLRBM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/LewisMSMW07,
author = {John P. Lewis and
Iman Mostafavi and
Gina E. Sosinsky and
Maryann E. Martone and
Ruth West},
title = {Shape Priors by Kernel Density Modeling of {PCA} Residual Structure},
booktitle = {Proceedings of the International Conference on Image Processing, {ICIP}
2007, September 16-19, 2007, San Antonio, Texas, {USA}},
pages = {333--336},
publisher = {{IEEE}},
year = {2007},
url = {https://doi.org/10.1109/ICIP.2007.4380022},
doi = {10.1109/ICIP.2007.4380022},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/icip/LewisMSMW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/owled/FongLGCBCWLTM07,
author = {Lisa Fong and
Stephen D. Larson and
Amarnath Gupta and
Christopher Condit and
William J. Bug and
Li Chen and
Ruth West and
Stephan Lamont and
Masako Terada and
Maryann E. Martone},
editor = {Christine Golbreich and
Aditya Kalyanpur and
Bijan Parsia},
title = {An Ontology-Driven Knowledge Environment For Subcellular Neuroanatomy},
booktitle = {Proceedings of the {OWLED} 2007 Workshop on {OWL:} Experiences and
Directions, Innsbruck, Austria, June 6-7, 2007},
series = {{CEUR} Workshop Proceedings},
volume = {258},
publisher = {CEUR-WS.org},
year = {2007},
url = {https://ceur-ws.org/Vol-258/paper34.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/owled/FongLGCBCWLTM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/owled/LarsonM07,
author = {Stephen D. Larson and
Maryann E. Martone},
editor = {Christine Golbreich and
Aditya Kalyanpur and
Bijan Parsia},
title = {Rule-Based Reasoning With {A} Multi-Scale Neuroanatomical Ontology},
booktitle = {Proceedings of the {OWLED} 2007 Workshop on {OWL:} Experiences and
Directions, Innsbruck, Austria, June 6-7, 2007},
series = {{CEUR} Workshop Proceedings},
volume = {258},
publisher = {CEUR-WS.org},
year = {2007},
url = {https://ceur-ws.org/Vol-258/paper07.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/owled/LarsonM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/siggraph/LiangSWMZ07,
author = {Chih K. Liang and
J{\"{u}}rgen P. Schulze and
Ruth West and
Maryann E. Martone and
Matthias Zwicker},
editor = {Marc Alexa and
Adam Finkelstein},
title = {Bridging the resolution gap: superimposition of multiple multi-channel
volumes},
booktitle = {International Conference on Computer Graphics and Interactive Techniques,
{SIGGRAPH} 2007, San Diego, California, USA, August 5-9, 2007, Posters},
pages = {121},
publisher = {{ACM}},
year = {2007},
url = {https://doi.org/10.1145/1280720.1280852},
doi = {10.1145/1280720.1280852},
timestamp = {Thu, 28 Jul 2022 12:13:22 +0200},
biburl = {https://dblp.org/rec/conf/siggraph/LiangSWMZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/SinghSTLJRLWONPMNLE06,
author = {Rajvikram Singh and
Nicholas Schwarz and
Nut Taesombut and
David Lee and
Byungil Jeong and
Luc Renambot and
Abel W. Lin and
Ruth West and
Hiromu Otsuka and
Sei Naito and
Steven Peltier and
Maryann E. Martone and
Kazunori Nozaki and
Jason Leigh and
Mark H. Ellisman},
title = {Real-time multi-scale brain data acquisition, assembly, and analysis
using an end-to-end OptIPuter},
journal = {Future Gener. Comput. Syst.},
volume = {22},
number = {8},
pages = {1032--1039},
year = {2006},
url = {https://doi.org/10.1016/j.future.2006.03.017},
doi = {10.1016/J.FUTURE.2006.03.017},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fgcs/SinghSTLJRLWONPMNLE06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/PriceCMHPME06,
author = {Diana L. Price and
Sunny K. Chow and
Natalie A. B. MacLean and
Hiroyuki Hakozaki and
Steven Peltier and
Maryann E. Martone and
Mark H. Ellisman},
title = {High-resolution large-scale mosaic imaging using multiphoton microscopy
to characterize transgenic mouse models of human neurological disorders},
journal = {Neuroinformatics},
volume = {4},
number = {1},
pages = {65--80},
year = {2006},
url = {https://doi.org/10.1385/NI:4:1:65},
doi = {10.1385/NI:4:1:65},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/PriceCMHPME06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/AstakhovGGRLYQSME06,
author = {Vadim Astakhov and
Amarnath Gupta and
Jeffrey S. Grethe and
Edward Ross and
David Little and
Aylin Yilmaz and
Xufei Qian and
Simone Santini and
Maryann E. Martone and
Mark H. Ellisman},
title = {Semantically Based Data Integration Environment for Biomedical Research},
booktitle = {19th {IEEE} International Symposium on Computer-Based Medical Systems
{(CBMS} 2006), 22-23 June 2006, Salt Lake City, Utah, {USA}},
pages = {171--176},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/CBMS.2006.143},
doi = {10.1109/CBMS.2006.143},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/AstakhovGGRLYQSME06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/KumarRKCSCLM06,
author = {Vijay S. Kumar and
Benjamin Rutt and
Tahsin M. Kur{\c{c}} and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek and
Joel H. Saltz and
Sunny K. Chow and
Stephan Lamont and
Maryann E. Martone},
title = {Imaging and visual analysis - Large image correction and warping in
a cluster environment},
booktitle = {Proceedings of the {ACM/IEEE} {SC2006} Conference on High Performance
Networking and Computing, November 11-17, 2006, Tampa, FL, {USA}},
pages = {79},
publisher = {{ACM} Press},
year = {2006},
url = {https://doi.org/10.1145/1188455.1188539},
doi = {10.1145/1188455.1188539},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/KumarRKCSCLM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vldb/ChenMGFW06,
author = {Li Chen and
Maryann E. Martone and
Amarnath Gupta and
Lisa Fong and
Mona Wong{-}Barnum},
editor = {Umeshwar Dayal and
Kyu{-}Young Whang and
David B. Lomet and
Gustavo Alonso and
Guy M. Lohman and
Martin L. Kersten and
Sang Kyun Cha and
Young{-}Kuk Kim},
title = {OntoQuest: Exploring Ontological Data Made Easy},
booktitle = {Proceedings of the 32nd International Conference on Very Large Data
Bases, Seoul, Korea, September 12-15, 2006},
pages = {1183--1186},
publisher = {{ACM}},
year = {2006},
url = {http://dl.acm.org/citation.cfm?id=1164239},
timestamp = {Wed, 13 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/vldb/ChenMGFW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthgrid/GretheBGJLMPPRSZE05,
author = {Jeffrey S. Grethe and
Chaitan Baru and
Amarnath Gupta and
Mark James and
Bertram Lud{\"{a}}scher and
Maryann E. Martone and
Philip M. Papadopoulos and
Steven Peltier and
Arcot Rajasekar and
Simone Santini and
Ilya Zaslavsky and
Mark H. Ellisman},
editor = {Tony Solomonides and
Richard McClatchey and
Vincent Breton and
Yannick Legr{\'{e}} and
Sofie N{\o}rager},
title = {Biomedical Informatics Research Network: Building a National Collaboratory
to Hasten the Derivation of New Understanding and Treatment of Disease},
booktitle = {From Grid to Healthgrid - Proceedings of Healthgrid 2005, Oxford,
UK, 7-9 April 2005},
series = {Studies in Health Technology and Informatics},
volume = {112},
pages = {100--109},
publisher = {{IOS} Press},
year = {2005},
url = {http://www.booksonline.iospress.nl/Content/View.aspx?piid=4235},
timestamp = {Mon, 13 Oct 2014 14:37:15 +0200},
biburl = {https://dblp.org/rec/conf/healthgrid/GretheBGJLMPPRSZE05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dexaw/ZaslavskyHTMG04,
author = {Ilya Zaslavsky and
Haiyun He and
Joshua Tran and
Maryann E. Martone and
Amarnath Gupta},
title = {Integrating Brain Data Spatially: Spatial Data Infrastructure and
Atlas Environment for Online Federation and Analysis of Brain Images},
booktitle = {15th International Workshop on Database and Expert Systems Applications
{(DEXA} 2004), with CD-ROM, 30 August - 3 September 2004, Zaragoza,
Spain},
pages = {389--393},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/DEXA.2004.1333505},
doi = {10.1109/DEXA.2004.1333505},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dexaw/ZaslavskyHTMG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jpdc/PeltierLLMLMWDME03,
author = {Steven Peltier and
Abel W. Lin and
David Lee and
Stephen A. Mock and
Stephan Lamont and
Tomas E. Molina and
Mona Wong and
Lu Dai and
Maryann E. Martone and
Mark H. Ellisman},
title = {The Telescience Portal for advanced tomography applications},
journal = {J. Parallel Distributed Comput.},
volume = {63},
number = {5},
pages = {539--550},
year = {2003},
url = {https://doi.org/10.1016/S0743-7315(03)00061-3},
doi = {10.1016/S0743-7315(03)00061-3},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jpdc/PeltierLLMLMWDME03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/MartoneZGQHPWSE03,
author = {Maryann E. Martone and
Shenglan Zhang and
Amarnath Gupta and
Xufei Qian and
Haiyun He and
Diana L. Price and
Mona Wong and
Simone Santini and
Mark H. Ellisman},
title = {The cell-centered database - {A} database for multiscale structural
and protein localization data from light and electron microscopy},
journal = {Neuroinformatics},
volume = {1},
number = {4},
pages = {379--395},
year = {2003},
url = {https://doi.org/10.1385/NI:1:4:379},
doi = {10.1385/NI:1:4:379},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/MartoneZGQHPWSE03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nn/GuptaLGM03,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Jeffrey S. Grethe and
Maryann E. Martone},
title = {Towards a formalization of disease-specific ontologies for neuroinformatics},
journal = {Neural Networks},
volume = {16},
number = {9},
pages = {1277--1292},
year = {2003},
url = {https://doi.org/10.1016/j.neunet.2003.07.008},
doi = {10.1016/J.NEUNET.2003.07.008},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nn/GuptaLGM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sigmod/GuptaLM03,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Maryann E. Martone},
editor = {Alon Y. Halevy and
Zachary G. Ives and
AnHai Doan},
title = {{BIRN-M:} {A} Semantic Mediator for Solving Real-World Neuroscience
Problems},
booktitle = {Proceedings of the 2003 {ACM} {SIGMOD} International Conference on
Management of Data, San Diego, California, USA, June 9-12, 2003},
pages = {678},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/872757.872869},
doi = {10.1145/872757.872869},
timestamp = {Thu, 11 Mar 2021 15:20:15 +0100},
biburl = {https://dblp.org/rec/conf/sigmod/GuptaLM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/ZhangQGM03,
author = {Shenglan Zhang and
Xufei Qian and
Amarnath Gupta and
Maryann E. Martone},
title = {A Practical Approach for Microscopy Imaging Data Management {(MIDM)}
in Neuroscience},
booktitle = {Proceedings of the 15th International Conference on Scientific and
Statistical Database Management {(SSDBM} 2003), 9-11 July 2003, Cambridge,
MA, {USA}},
pages = {237--240},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/SSDM.2003.1214986},
doi = {10.1109/SSDM.2003.1214986},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/ZhangQGM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/el/03/LudascherGM03,
author = {Bertram Lud{\"{a}}scher and
Amarnath Gupta and
Maryann E. Martone},
editor = {Zo{\'{e}} Lacroix and
Terence Critchlow},
title = {A Model-Based Mediator System for Scientific Data Management},
booktitle = {Bioinformatics},
series = {The Morgan Kaufmann series in multimedia information and systems},
pages = {335--370},
publisher = {Elsevier},
year = {2003},
url = {https://doi.org/10.1016/b978-155860829-0/50014-0},
doi = {10.1016/B978-155860829-0/50014-0},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/el/03/LudascherGM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bncod/GuptaLMQRTZ02,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Maryann E. Martone and
Xufei Qian and
Edward Ross and
Joshua Tran and
Ilya Zaslavsky},
editor = {Barry Eaglestone and
Siobh{\'{a}}n North and
Alexandra Poulovassilis},
title = {A System for Managing Alternate Models in Model-Based Mediation},
booktitle = {Advances in Databases, 19th British National Conference on Databases,
{BNCOD} 19, Sheffield, UK, July 17-19, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2405},
pages = {54--57},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45495-0\_7},
doi = {10.1007/3-540-45495-0\_7},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/bncod/GuptaLMQRTZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/edbt/QianLMG02,
author = {Xufei Qian and
Bertram Lud{\"{a}}scher and
Maryann E. Martone and
Amarnath Gupta},
editor = {Christian S. Jensen and
Keith G. Jeffery and
Jaroslav Pokorn{\'{y}} and
Simonas Saltenis and
Elisa Bertino and
Klemens B{\"{o}}hm and
Matthias Jarke},
title = {Navigating Virtual Information Sources with Know-ME},
booktitle = {Advances in Database Technology - {EDBT} 2002, 8th International Conference
on Extending Database Technology, Prague, Czech Republic, March 25-27,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2287},
pages = {739--741},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45876-X\_48},
doi = {10.1007/3-540-45876-X\_48},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/edbt/QianLMG02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/GuptaLM02,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Maryann E. Martone},
editor = {Stefano Spaccapietra and
Salvatore T. March and
Yahiko Kambayashi},
title = {Registering Scientific Information Sources for Semantic Mediation},
booktitle = {Conceptual Modeling - {ER} 2002, 21st International Conference on
Conceptual Modeling, Tampere, Finland, October 7-11, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2503},
pages = {182--198},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45816-6\_23},
doi = {10.1007/3-540-45816-6\_23},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/er/GuptaLM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/GuptaLM01,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Maryann E. Martone},
title = {An Extensible Model-Based Mediatior System with Domain Maps},
booktitle = {{ICDE} 2001, Demo Session Abstracts (Informal Proceedings)},
year = {2001},
url = {http://www.sdsc.edu/\%7Eludaesch/Paper/icde01.html},
timestamp = {Thu, 02 Feb 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/GuptaLM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/LudascherGM01,
author = {Bertram Lud{\"{a}}scher and
Amarnath Gupta and
Maryann E. Martone},
editor = {Dimitrios Georgakopoulos and
Alexander Buchmann},
title = {Model-Based Mediation with Domain Maps},
booktitle = {Proceedings of the 17th International Conference on Data Engineering,
April 2-6, 2001, Heidelberg, Germany},
pages = {81--90},
publisher = {{IEEE} Computer Society},
year = {2001},
url = {https://doi.org/10.1109/ICDE.2001.914816},
doi = {10.1109/ICDE.2001.914816},
timestamp = {Fri, 15 Mar 2024 12:30:44 +0100},
biburl = {https://dblp.org/rec/conf/icde/LudascherGM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/GuptaLM00,
author = {Amarnath Gupta and
Bertram Lud{\"{a}}scher and
Maryann E. Martone},
editor = {Oliver G{\"{u}}nther and
Hans{-}Joachim Lenz},
title = {Knowledge-Based Integration of Neuroscience Data Sources},
booktitle = {Proceedings of the 12th International Conference on Scientific and
Statistical Database Management, Berlin, Germany, July 26-28, 2000},
pages = {39--52},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/SSDM.2000.869777},
doi = {10.1109/SSDM.2000.869777},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/GuptaLM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vldb/LudasaherGM00,
author = {Bertram Lud{\"{a}}scher and
Amarnath Gupta and
Maryann E. Martone},
editor = {Amr El Abbadi and
Michael L. Brodie and
Sharma Chakravarthy and
Umeshwar Dayal and
Nabil Kamel and
Gunter Schlageter and
Kyu{-}Young Whang},
title = {Model-Based Information Integration in a Neuroscience Mediator System},
booktitle = {{VLDB} 2000, Proceedings of 26th International Conference on Very
Large Data Bases, September 10-14, 2000, Cairo, Egypt},
pages = {639--642},
publisher = {Morgan Kaufmann},
year = {2000},
url = {http://www.vldb.org/conf/2000/P639.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/vldb/LudasaherGM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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