BibTeX records: Raja Mazumder

download as .bib file

@article{DBLP:journals/jcb/KimADLMWK19,
  author    = {Baekdoo Kim and
               Thahmina Ali and
               Changsu Dong and
               Carlos Lijeron and
               Raja Mazumder and
               Claudia Wultsch and
               Konstantinos Krampis},
  title     = {\emph{miCloud: } {A} Plug-n-Play, Extensible, On-Premises Bioinformatics
               Cloud for Seamless Execution of Complex Next-Generation Sequencing
               Data Analysis Pipelines},
  journal   = {Journal of Computational Biology},
  volume    = {26},
  number    = {3},
  pages     = {280--284},
  year      = {2019},
  url       = {https://doi.org/10.1089/cmb.2018.0218},
  doi       = {10.1089/cmb.2018.0218},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/KimADLMWK19},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GuptaDRHWMV18,
  author    = {Samir Gupta and
               Hayley Dingerdissen and
               Karen E. Ross and
               Yu Hu and
               Cathy H. Wu and
               Raja Mazumder and
               K. Vijay{-}Shanker},
  title     = {{DEXTER:} Disease-Expression Relation Extraction from Text},
  journal   = {Database},
  volume    = {2018},
  pages     = {bay045},
  year      = {2018},
  url       = {https://doi.org/10.1093/database/bay045},
  doi       = {10.1093/database/bay045},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/GuptaDRHWMV18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/HuDGKVWYM18,
  author    = {Yu Hu and
               Hayley Dingerdissen and
               Samir Gupta and
               Robel Kahsay and
               K. Vijay{-}Shanker and
               Quan Wan and
               Cheng Yan and
               Raja Mazumder},
  title     = {Identification of key differentially expressed MicroRNAs in cancer
               patients through pan-cancer analysis},
  journal   = {Comp. in Bio. and Med.},
  volume    = {103},
  pages     = {183--197},
  year      = {2018},
  url       = {https://doi.org/10.1016/j.compbiomed.2018.10.021},
  doi       = {10.1016/j.compbiomed.2018.10.021},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/cbm/HuDGKVWYM18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DingerdissenTHC18,
  author    = {Hayley Dingerdissen and
               John Torcivia{-}Rodriguez and
               Yu Hu and
               Ting{-}Chia Chang and
               Raja Mazumder and
               Robel Kahsay},
  title     = {BioMuta and BioXpress: mutation and expression knowledgebases for
               cancer biomarker discovery},
  journal   = {Nucleic Acids Research},
  volume    = {46},
  number    = {Database-Issue},
  pages     = {D1128--D1136},
  year      = {2018},
  url       = {https://doi.org/10.1093/nar/gkx907},
  doi       = {10.1093/nar/gkx907},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/DingerdissenTHC18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GoldweberTTSM17,
  author    = {Scott Goldweber and
               Jamal Theodore and
               John Torcivia{-}Rodriguez and
               Vahan Simonyan and
               Raja Mazumder},
  title     = {Pubcast and Genecast: Browsing and Exploring Publications and Associated
               Curated Content in Biology Through Mobile Devices},
  journal   = {{IEEE/ACM} Trans. Comput. Biology Bioinform.},
  volume    = {14},
  number    = {2},
  pages     = {498--500},
  year      = {2017},
  url       = {https://doi.org/10.1109/TCBB.2016.2542802},
  doi       = {10.1109/TCBB.2016.2542802},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/tcbb/GoldweberTTSM17},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SimonyanCDFGGGK16,
  author    = {Vahan Simonyan and
               Konstantin Chumakov and
               Hayley Dingerdissen and
               William J. Faison and
               Scott Goldweber and
               Anton Golikov and
               Naila Gulzar and
               Konstantinos Karagiannis and
               Phuc Vinh Nguyen Lam and
               Thomas Maudru and
               Olesja Muravitskaja and
               Ekaterina Osipova and
               Yang Pan and
               Alexey Pschenichnov and
               Alexandre Rostovtsev and
               Luis V. Santana{-}Quintero and
               Krista Smith and
               Elaine E. Thompson and
               Valery Tkachenko and
               John Torcivia{-}Rodriguez and
               Alin Voskanian and
               Quan Wan and
               Jing Wang and
               Tsung{-}Jung Wu and
               Carolyn Wilson and
               Raja Mazumder},
  title     = {High-performance integrated virtual environment {(HIVE):} a robust
               infrastructure for next-generation sequence data analysis},
  journal   = {Database},
  volume    = {2016},
  year      = {2016},
  url       = {https://doi.org/10.1093/database/baw022},
  doi       = {10.1093/database/baw022},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/SimonyanCDFGGGK16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenHMNMZPWWC16,
  author    = {Chuming Chen and
               Hongzhan Huang and
               Raja Mazumder and
               Darren A. Natale and
               Peter B. McGarvey and
               Jian Zhang and
               Shawn W. Polson and
               Yuqi Wang and
               Cathy H. Wu},
  title     = {Computational clustering for viral reference proteomes},
  journal   = {Bioinformatics},
  volume    = {32},
  number    = {13},
  pages     = {2041--2043},
  year      = {2016},
  url       = {https://doi.org/10.1093/bioinformatics/btw110},
  doi       = {10.1093/bioinformatics/btw110},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/ChenHMNMZPWWC16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WanDFGPWYZM15,
  author    = {Quan Wan and
               Hayley Dingerdissen and
               Yu Fan and
               Naila Gulzar and
               Yang Pan and
               Tsung{-}Jung Wu and
               Cheng Yan and
               Haichen Zhang and
               Raja Mazumder},
  title     = {BioXpress: an integrated RNA-seq-derived gene expression database
               for pan-cancer analysis},
  journal   = {Database},
  volume    = {2015},
  year      = {2015},
  url       = {https://doi.org/10.1093/database/bav019},
  doi       = {10.1093/database/bav019},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/WanDFGPWYZM15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuSCCCFHKKMMPSS15,
  author    = {Tsung{-}Jung Wu and
               Lynn M. Schriml and
               Qingrong Chen and
               Maureen Colbert and
               Daniel J. Crichton and
               Richard P. Finney and
               Ying Hu and
               Warren A. Kibbe and
               Heather Kincaid and
               Daoud M. Meerzaman and
               Elvira Mitraka and
               Yang Pan and
               Krista Smith and
               Sudhir Srivastava and
               Sari Ward and
               Cheng Yan and
               Raja Mazumder},
  title     = {Generating a focused view of disease ontology cancer terms for pan-cancer
               data integration and analysis},
  journal   = {Database},
  volume    = {2015},
  year      = {2015},
  url       = {https://doi.org/10.1093/database/bav032},
  doi       = {10.1093/database/bav032},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/WuSCCCFHKKMMPSS15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuSPSCSM14,
  author    = {Tsung{-}Jung Wu and
               Amirhossein Shamsaddini and
               Yang Pan and
               Krista Smith and
               Daniel J. Crichton and
               Vahan Simonyan and
               Raja Mazumder},
  title     = {A framework for organizing cancer-related variations from existing
               databases, publications and {NGS} data using a High-performance Integrated
               Virtual Environment {(HIVE)}},
  journal   = {Database},
  volume    = {2014},
  year      = {2014},
  url       = {https://doi.org/10.1093/database/bau022},
  doi       = {10.1093/database/bau022},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/WuSPSCSM14},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ColeKKAFMWGPSM14,
  author    = {Charles Cole and
               Konstantinos Krampis and
               Konstantinos Karagiannis and
               Jonas S. Almeida and
               William J. Faison and
               Mona Motwani and
               Quan Wan and
               Anton Golikov and
               Yang Pan and
               Vahan Simonyan and
               Raja Mazumder},
  title     = {Non-synonymous variations in cancer and their effects on the human
               proteome: workflow for {NGS} data biocuration and proteome-wide analysis
               of {TCGA} data},
  journal   = {{BMC} Bioinformatics},
  volume    = {15},
  pages     = {28},
  year      = {2014},
  url       = {https://doi.org/10.1186/1471-2105-15-28},
  doi       = {10.1186/1471-2105-15-28},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/ColeKKAFMWGPSM14},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/LamGKNSSM13,
  author    = {Phuc Vinh Nguyen Lam and
               Radoslav Goldman and
               Konstantinos Karagiannis and
               Tejas Narsule and
               Vahan Simonyan and
               Valerii Soika and
               Raja Mazumder},
  title     = {Structure-based Comparative Analysis and Prediction of N-linked Glycosylation
               Sites in Evolutionarily Distant Eukaryotes},
  journal   = {Genomics, Proteomics {\&} Bioinformatics},
  volume    = {11},
  number    = {2},
  pages     = {96--104},
  year      = {2013},
  url       = {https://doi.org/10.1016/j.gpb.2012.11.003},
  doi       = {10.1016/j.gpb.2012.11.003},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/gpb/LamGKNSSM13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/KaragiannisSM13,
  author    = {Konstantinos Karagiannis and
               Vahan Simonyan and
               Raja Mazumder},
  title     = {SNVDis: {A} Proteome-wide Analysis Service for Evaluating nsSNVs in
               Protein Functional Sites and Pathways},
  journal   = {Genomics, Proteomics {\&} Bioinformatics},
  volume    = {11},
  number    = {2},
  pages     = {122--126},
  year      = {2013},
  url       = {https://doi.org/10.1016/j.gpb.2012.10.003},
  doi       = {10.1016/j.gpb.2012.10.003},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/gpb/KaragiannisSM13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GaudetABBBCDFGHKKMKMNOOPRSSSAVWYM12,
  author    = {Pascale Gaudet and
               Cecilia N. Arighi and
               Frederic B. Bastian and
               Alex Bateman and
               Judith A. Blake and
               J. Michael Cherry and
               Peter D'Eustachio and
               Robert D. Finn and
               Michelle G. Giglio and
               Lynette Hirschman and
               Renate Kania and
               William Klimke and
               Maria Jesus Martin and
               Ilene Karsch{-}Mizrachi and
               Monica C. Munoz{-}Torres and
               Darren A. Natale and
               Claire O'Donovan and
               B. F. Francis Ouellette and
               Kim D. Pruitt and
               Marc Robinson{-}Rechavi and
               Susanna{-}Assunta Sansone and
               Paul N. Schofield and
               Granger G. Sutton and
               Kimberly Van Auken and
               Sona Vasudevan and
               Cathy H. Wu and
               Jasmine Young and
               Raja Mazumder},
  title     = {Recent advances in biocuration: Meeting Report from the fifth International
               Biocuration Conference},
  journal   = {Database},
  volume    = {2012},
  year      = {2012},
  url       = {https://doi.org/10.1093/database/bas036},
  doi       = {10.1093/database/bas036},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/GaudetABBBCDFGHKKMKMNOOPRSSSAVWYM12},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GaudetM12,
  author    = {Pascale Gaudet and
               Raja Mazumder},
  title     = {Biocuration Virtual Issue 2012},
  journal   = {Database},
  volume    = {2012},
  year      = {2012},
  url       = {https://doi.org/10.1093/database/bas011},
  doi       = {10.1093/database/bas011},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/biodb/GaudetM12},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangMSMZCW11,
  author    = {Hongzhan Huang and
               Peter B. McGarvey and
               Baris E. Suzek and
               Raja Mazumder and
               Jian Zhang and
               Yongxing Chen and
               Cathy H. Wu},
  title     = {A comprehensive protein-centric {ID} mapping service for molecular
               data integration},
  journal   = {Bioinformatics},
  volume    = {27},
  number    = {8},
  pages     = {1190--1191},
  year      = {2011},
  url       = {https://doi.org/10.1093/bioinformatics/btr101},
  doi       = {10.1093/bioinformatics/btr101},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/HuangMSMZCW11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangCCWKSYSJLXZMMHCZMWS08,
  author    = {C. Zhang and
               Oswald Crasta and
               S. Cammer and
               Rebecca Will and
               Ron Kenyon and
               Daniel E. Sullivan and
               Q. Yu and
               W. Sun and
               R. Jha and
               D. Liu and
               Tian Xue and
               Y. Zhang and
               M. Moore and
               Peter B. McGarvey and
               Hongzhan Huang and
               Yongxing Chen and
               J. Zhang and
               Raja Mazumder and
               Cathy H. Wu and
               Bruno W. S. Sobral},
  title     = {An emerging cyberinfrastructure for biodefense pathogen and pathogen-host
               data},
  journal   = {Nucleic Acids Research},
  volume    = {36},
  number    = {Database-Issue},
  pages     = {884--891},
  year      = {2008},
  url       = {https://doi.org/10.1093/nar/gkm903},
  doi       = {10.1093/nar/gkm903},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/ZhangCCWKSYSJLXZMMHCZMWS08},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/MazumderV08,
  author    = {Raja Mazumder and
               Sona Vasudevan},
  title     = {Structure-Guided Comparative Analysis of Proteins: Principles, Tools,
               and Applications for Predicting Function},
  journal   = {PLoS Computational Biology},
  volume    = {4},
  number    = {9},
  year      = {2008},
  url       = {https://doi.org/10.1371/journal.pcbi.1000151},
  doi       = {10.1371/journal.pcbi.1000151},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/ploscb/MazumderV08},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuzekHMMW07,
  author    = {Baris E. Suzek and
               Hongzhan Huang and
               Peter B. McGarvey and
               Raja Mazumder and
               Cathy H. Wu},
  title     = {UniRef: comprehensive and non-redundant UniProt reference clusters},
  journal   = {Bioinformatics},
  volume    = {23},
  number    = {10},
  pages     = {1282--1288},
  year      = {2007},
  url       = {https://doi.org/10.1093/bioinformatics/btm098},
  doi       = {10.1093/bioinformatics/btm098},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/SuzekHMMW07},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WuABNBBFGHLMMMORS06,
  author    = {Cathy H. Wu and
               Rolf Apweiler and
               Amos Bairoch and
               Darren A. Natale and
               Winona C. Barker and
               Brigitte Boeckmann and
               Serenella Ferro and
               Elisabeth Gasteiger and
               Hongzhan Huang and
               Rodrigo Lopez and
               Michele Magrane and
               Maria Jesus Martin and
               Raja Mazumder and
               Claire O'Donovan and
               Nicole Redaschi and
               Baris E. Suzek},
  title     = {The Universal Protein Resource (UniProt): an expanding universe of
               protein information},
  journal   = {Nucleic Acids Research},
  volume    = {34},
  number    = {Database-Issue},
  pages     = {187--191},
  year      = {2006},
  url       = {https://doi.org/10.1093/nar/gkj161},
  doi       = {10.1093/nar/gkj161},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/WuABNBBFGHLMMMORS06},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MazumderNMTW05,
  author    = {Raja Mazumder and
               Darren A. Natale and
               Sudhir Murthy and
               Rathi Thiagarajan and
               Cathy H. Wu},
  title     = {Computational identification of strain-, species- and genus-specific
               proteins},
  journal   = {{BMC} Bioinformatics},
  volume    = {6},
  pages     = {279},
  year      = {2005},
  url       = {https://doi.org/10.1186/1471-2105-6-279},
  doi       = {10.1186/1471-2105-6-279},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/MazumderNMTW05},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CelamkotiKPMBS04,
  author    = {Srikanth Celamkoti and
               Sashidhara Kundeti and
               Anjan Purkayastha and
               Raja Mazumder and
               Charles Buck and
               Donald Seto},
  title     = {GeneOrder3.0: Software for comparing the order of genes in pairs of
               small bacterial genomes},
  journal   = {{BMC} Bioinformatics},
  volume    = {5},
  pages     = {52},
  year      = {2004},
  url       = {https://doi.org/10.1186/1471-2105-5-52},
  doi       = {10.1186/1471-2105-5-52},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/CelamkotiKPMBS04},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WuNHYNVHMKKLSACZCCCDB04,
  author    = {Cathy H. Wu and
               Anastasia N. Nikolskaya and
               Hongzhan Huang and
               Lai{-}Su L. Yeh and
               Darren A. Natale and
               Cholanayakanahalli R. Vinayaka and
               Zhang{-}Zhi Hu and
               Raja Mazumder and
               Sandeep Kumar and
               Panagiotis Kourtesis and
               Robert S. Ledley and
               Baris E. Suzek and
               Leslie Arminski and
               Yongxing Chen and
               Jian Zhang and
               Jorge Louie Cardenas and
               Sehee Chung and
               Jorge Castro{-}Alvear and
               Georgi Dinkov and
               Winona C. Barker},
  title     = {{PIRSF:} family classification system at the Protein Information Resource},
  journal   = {Nucleic Acids Research},
  volume    = {32},
  number    = {Database-Issue},
  pages     = {112--114},
  year      = {2004},
  url       = {https://doi.org/10.1093/nar/gkh097},
  doi       = {10.1093/nar/gkh097},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/WuNHYNVHMKKLSACZCCCDB04},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TatusovFJJKKKMMNRSSVWYN03,
  author    = {Roman L. Tatusov and
               Natalie D. Fedorova and
               John D. Jackson and
               Aviva R. Jacobs and
               Boris Kiryutin and
               Eugene V. Koonin and
               Dmitri M. Krylov and
               Raja Mazumder and
               Sergei L. Mekhedov and
               Anastasia N. Nikolskaya and
               B. Sridhar Rao and
               Sergei Smirnov and
               Alexander V. Sverdlov and
               Sona Vasudevan and
               Yuri I. Wolf and
               Jodie J. Yin and
               Darren A. Natale},
  title     = {The {COG} database: an updated version includes eukaryotes},
  journal   = {{BMC} Bioinformatics},
  volume    = {4},
  pages     = {41},
  year      = {2003},
  url       = {https://doi.org/10.1186/1471-2105-4-41},
  doi       = {10.1186/1471-2105-4-41},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/TatusovFJJKKKMMNRSSVWYN03},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03,
  author    = {Aron Marchler{-}Bauer and
               John B. Anderson and
               Carol DeWeese{-}Scott and
               Natalie D. Fedorova and
               Lewis Y. Geer and
               Siqian He and
               David I. Hurwitz and
               John D. Jackson and
               Aviva R. Jacobs and
               Christopher J. Lanczycki and
               Cynthia A. Liebert and
               Chunlei Liu and
               Thomas Madej and
               Gabriele H. Marchler and
               Raja Mazumder and
               Anastasia N. Nikolskaya and
               Anna R. Panchenko and
               Bachoti S. Rao and
               Benjamin A. Shoemaker and
               Vahan Simonyan and
               James S. Song and
               Paul A. Thiessen and
               Sona Vasudevan and
               Yanli Wang and
               Roxanne A. Yamashita and
               Jodie J. Yin and
               Stephen H. Bryant},
  title     = {{CDD:} a curated Entrez database of conserved domain alignments},
  journal   = {Nucleic Acids Research},
  volume    = {31},
  number    = {1},
  pages     = {383--387},
  year      = {2003},
  url       = {https://doi.org/10.1093/nar/gkg087},
  doi       = {10.1093/nar/gkg087},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03,
  author    = {Jie Chen and
               John B. Anderson and
               Carol DeWeese{-}Scott and
               Natalie D. Fedorova and
               Lewis Y. Geer and
               Siqian He and
               David I. Hurwitz and
               John D. Jackson and
               Aviva R. Jacobs and
               Christopher J. Lanczycki and
               Cynthia A. Liebert and
               Chunlei Liu and
               Thomas Madej and
               Aron Marchler{-}Bauer and
               Gabriele H. Marchler and
               Raja Mazumder and
               Anastasia N. Nikolskaya and
               Bachoti S. Rao and
               Anna R. Panchenko and
               Benjamin A. Shoemaker and
               Vahan Simonyan and
               James S. Song and
               Paul A. Thiessen and
               Sona Vasudevan and
               Yanli Wang and
               Roxanne A. Yamashita and
               Jodie J. Yin and
               Stephen H. Bryant},
  title     = {{MMDB:} Entrez's 3D-structure database},
  journal   = {Nucleic Acids Research},
  volume    = {31},
  number    = {1},
  pages     = {474--477},
  year      = {2003},
  url       = {https://doi.org/10.1093/nar/gkg086},
  doi       = {10.1093/nar/gkg086},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZafarMS02,
  author    = {Nikhat Zafar and
               Raja Mazumder and
               Donald Seto},
  title     = {CoreGenes: {A} computational tool for identifying and cataloging "core"
               genes in a set of small genomes},
  journal   = {{BMC} Bioinformatics},
  volume    = {3},
  pages     = {12},
  year      = {2002},
  url       = {https://doi.org/10.1186/1471-2105-3-12},
  doi       = {10.1186/1471-2105-3-12},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/ZafarMS02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/ZafarMS02,
  author    = {Nikhat Zafar and
               Raja Mazumder and
               Donald Seto},
  title     = {Application of global computational tools GeneOrder and CoreGenes
               to the comparative analyses of chordopoxvirus genomes},
  journal   = {Inf. Sci.},
  volume    = {146},
  number    = {1-4},
  pages     = {127--135},
  year      = {2002},
  url       = {https://doi.org/10.1016/S0020-0255(02)00220-7},
  doi       = {10.1016/S0020-0255(02)00220-7},
  timestamp = {Sat, 27 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/isci/ZafarMS02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jcis/ZafarMS02,
  author    = {Nikhat Zafar and
               Raja Mazumder and
               Donald Seto},
  title     = {Application of Global Computational Tools GeneOrder and OrthologLocator
               to the Comparative Analyses of Chordopoxvirus Genomes},
  booktitle = {Proceedings of the 6th Joint Conference on Information Science, March
               8-13, 2002, Research Triangle Park, North Carolina, {USA}},
  pages     = {1186--1192},
  year      = {2002},
  crossref  = {DBLP:conf/jcis/2002},
  timestamp = {Mon, 13 Nov 2017 18:15:11 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/jcis/ZafarMS02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MazumderKS01,
  author    = {Raja Mazumder and
               Ashok S. Kolaskar and
               Donald Seto},
  title     = {GeneOrder: comparing the order of genes in small genomes},
  journal   = {Bioinformatics},
  volume    = {17},
  number    = {1},
  pages     = {162--166},
  year      = {2001},
  url       = {https://doi.org/10.1093/bioinformatics/17.2.162},
  doi       = {10.1093/bioinformatics/17.2.162},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/MazumderKS01},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/jcis/2002,
  editor    = {H. John Caulfield and
               Shu{-}Heng Chen and
               Heng{-}Da Cheng and
               Richard J. Duro and
               Vasant G. Honavar and
               Etienne E. Kerre and
               Mi Lu and
               Manuel Gra{\~{n}}a Romay and
               Timothy K. Shih and
               Dan Ventura and
               Paul P. Wang and
               Yuanyuan Yang},
  title     = {Proceedings of the 6th Joint Conference on Information Science, March
               8-13, 2002, Research Triangle Park, North Carolina, {USA}},
  publisher = {{JCIS} / Association for Intelligent Machinery, Inc.},
  year      = {2002},
  isbn      = {0-9707890-1-7},
  timestamp = {Mon, 13 Nov 2017 18:15:11 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/jcis/2002},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
a service of Schloss Dagstuhl - Leibniz Center for Informatics