BibTeX records: Jill P. Mesirov

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@article{DBLP:journals/bioinformatics/RobinsonTTM23,
  author       = {James T. Robinson and
                  Helga Thorvaldsd{\'{o}}ttir and
                  Douglass Turner and
                  Jill P. Mesirov},
  title        = {igv.js: an embeddable JavaScript implementation of the Integrative
                  Genomics Viewer {(IGV)}},
  journal      = {Bioinform.},
  volume       = {39},
  number       = {1},
  year         = {2023},
  url          = {https://doi.org/10.1093/bioinformatics/btac830},
  doi          = {10.1093/BIOINFORMATICS/BTAC830},
  timestamp    = {Fri, 15 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/RobinsonTTM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/BrennerBCMMR19,
  author       = {Steven E. Brenner and
                  Martha L. Bulyk and
                  Dana C. Crawford and
                  Jill P. Mesirov and
                  Alexander A. Morgan and
                  Predrag Radivojac},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Marylyn D. Ritchie and
                  Teri E. Klein},
  title        = {Session introduction},
  booktitle    = {Biocomputing 2019: Proceedings of the Pacific Symposium, The Big Island
                  of Hawaii, Hawaii, USA, January 3-7, 2019},
  pages        = {220--223},
  year         = {2019},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb19/intro-pm.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/BrennerBCMMR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/MahTM18,
  author       = {Clarence K. Mah and
                  Thorin Tabor and
                  Jill P. Mesirov},
  title        = {An accessible, interactive GenePattern Notebook for analysis and exploration
                  of single-cell transcriptomic data},
  journal      = {F1000Research},
  volume       = {7},
  pages        = {1306},
  year         = {2018},
  url          = {https://doi.org/10.12688/f1000research.15830.1},
  doi          = {10.12688/F1000RESEARCH.15830.1},
  timestamp    = {Fri, 21 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/MahTM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/CarlinKGITRM17,
  author       = {Daniel E. Carlin and
                  Kassi Kosnicki and
                  Sara Garamszegi and
                  Trey Ideker and
                  Helga Thorvaldsd{\'{o}}ttir and
                  Michael Reich and
                  Jill P. Mesirov},
  title        = {A multi-tool recipe to identify regions of protein-DNA binding and
                  their influence on associated gene expression},
  journal      = {F1000Research},
  volume       = {6},
  pages        = {784},
  year         = {2017},
  url          = {https://doi.org/10.12688/f1000research.11616.1},
  doi          = {10.12688/F1000RESEARCH.11616.1},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/CarlinKGITRM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KatzWSSWTRMAB15,
  author       = {Yarden Katz and
                  Eric T. Wang and
                  Jacob Silterra and
                  Schraga Schwartz and
                  Bang Wong and
                  Helga Thorvaldsd{\'{o}}ttir and
                  James T. Robinson and
                  Jill P. Mesirov and
                  Edoardo M. Airoldi and
                  Christopher B. Burge},
  title        = {Quantitative visualization of alternative exon expression from RNA-seq
                  data},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {14},
  pages        = {2400--2402},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btv034},
  doi          = {10.1093/BIOINFORMATICS/BTV034},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KatzWSSWTRMAB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/TanWTHM15,
  author       = {Yan Tan and
                  Felix Wu and
                  Pablo Tamayo and
                  W. Nicholas Haining and
                  Jill P. Mesirov},
  title        = {Constellation Map: Downstream visualization and interpretation of
                  gene set enrichment results},
  journal      = {F1000Research},
  volume       = {4},
  pages        = {167},
  year         = {2015},
  url          = {https://doi.org/10.12688/f1000research.6644.1},
  doi          = {10.12688/F1000RESEARCH.6644.1},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/TanWTHM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/DemchakHRLSIM14,
  author       = {Barry Demchak and
                  Tim Hull and
                  Michael Reich and
                  Ted Liefeld and
                  Michael E. Smoot and
                  Trey Ideker and
                  Jill P. Mesirov},
  title        = {Cytoscape: the network visualization tool for GenomeSpace workflows},
  journal      = {F1000Research},
  volume       = {3},
  pages        = {151},
  year         = {2014},
  url          = {https://doi.org/10.12688/f1000research.4492.1},
  doi          = {10.12688/F1000RESEARCH.4492.1},
  timestamp    = {Fri, 08 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/DemchakHRLSIM14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ThorvaldsdottirRM13,
  author       = {Helga Thorvaldsd{\'{o}}ttir and
                  James T. Robinson and
                  Jill P. Mesirov},
  title        = {Integrative Genomics Viewer {(IGV):} high-performance genomics data
                  visualization and exploration},
  journal      = {Briefings Bioinform.},
  volume       = {14},
  number       = {2},
  pages        = {178--192},
  year         = {2013},
  url          = {https://doi.org/10.1093/bib/bbs017},
  doi          = {10.1093/BIB/BBS017},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/ThorvaldsdottirRM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/scfbm/SpidlenBBCNHQLRMWSSB13,
  author       = {Josef Spidlen and
                  Aaron Barsky and
                  Karin Breuer and
                  Peter Carr and
                  Marc{-}Danie Nazaire and
                  Barbara A. Hill and
                  Yu Qian and
                  Ted Liefeld and
                  Michael Reich and
                  Jill P. Mesirov and
                  Peter Wilkinson and
                  Richard H. Scheuermann and
                  Rafick{-}Pierre Sekaly and
                  Ryan Remy Brinkman},
  title        = {GenePattern Flow Cytometry Suite},
  journal      = {Source Code Biol. Medicine},
  volume       = {8},
  pages        = {14},
  year         = {2013},
  url          = {https://doi.org/10.1186/1751-0473-8-14},
  doi          = {10.1186/1751-0473-8-14},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/scfbm/SpidlenBBCNHQLRMWSSB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaiLHJQMG12,
  author       = {Liming Lai and
                  Arthur Liberzon and
                  Jason Hennessey and
                  Gaixin Jiang and
                  Jianli Qi and
                  Jill P. Mesirov and
                  Steven X. Ge},
  title        = {AraPath: a knowledgebase for pathway analysis in Arabidopsis},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {17},
  pages        = {2291--2292},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/bts421},
  doi          = {10.1093/BIOINFORMATICS/BTS421},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LaiLHJQMG12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1211-6664,
  author       = {Fabien Campagne and
                  Kevin C. Dorff and
                  Nyasha Chambwe and
                  James T. Robinson and
                  Jill P. Mesirov and
                  Thomas D. Wu},
  title        = {Compression of structured high-throughput sequencing data},
  journal      = {CoRR},
  volume       = {abs/1211.6664},
  year         = {2012},
  url          = {http://arxiv.org/abs/1211.6664},
  eprinttype    = {arXiv},
  eprint       = {1211.6664},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1211-6664.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiberzonSPTTM11,
  author       = {Arthur Liberzon and
                  Aravind Subramanian and
                  Reid Pinchback and
                  Helga Thorvaldsd{\'{o}}ttir and
                  Pablo Tamayo and
                  Jill P. Mesirov},
  title        = {Molecular signatures database (MSigDB) 3.0},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {12},
  pages        = {1739--1740},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btr260},
  doi          = {10.1093/BIOINFORMATICS/BTR260},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LiberzonSPTTM11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PyneHWRLMBMTHJM10,
  author       = {Saumyadipta Pyne and
                  Xinli Hu and
                  Kui Wang and
                  Elizabeth Rossin and
                  Tsung{-}I Lin and
                  Lisa Maier and
                  Clare Baecher{-}Allan and
                  Geoffrey J. McLachlan and
                  Pablo Tamayo and
                  David Hafler and
                  Philip L. De Jager and
                  Jill P. Mesirov},
  editor       = {Bonnie Berger},
  title        = {Automated High-Dimensional Flow Cytometric Data Analysis},
  booktitle    = {Research in Computational Molecular Biology, 14th Annual International
                  Conference, {RECOMB} 2010, Lisbon, Portugal, April 25-28, 2010. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {6044},
  pages        = {577},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-3-642-12683-3\_41},
  doi          = {10.1007/978-3-642-12683-3\_41},
  timestamp    = {Wed, 09 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/PyneHWRLMBMTHJM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LinialMMR08,
  author       = {Michal Linial and
                  Jill P. Mesirov and
                  B. J. Morrison McKay and
                  Burkhard Rost},
  title        = {{ISMB} 2008 Toronto},
  journal      = {PLoS Comput. Biol.},
  volume       = {4},
  number       = {6},
  year         = {2008},
  url          = {https://doi.org/10.1371/journal.pcbi.1000094},
  doi          = {10.1371/JOURNAL.PCBI.1000094},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ploscb/LinialMMR08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SubramanianKGTM07,
  author       = {Aravind Subramanian and
                  Heidi Kuehn and
                  Joshua Gould and
                  Pablo Tamayo and
                  Jill P. Mesirov},
  title        = {\emph{GSEA-P}: a desktop application for Gene Set Enrichment Analysis},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {23},
  pages        = {3251--3253},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btm369},
  doi          = {10.1093/BIOINFORMATICS/BTM369},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SubramanianKGTM07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DalginASTMGDB07,
  author       = {Gul S. Dalgin and
                  Gabriela Alexe and
                  Daniel Scanfeld and
                  Pablo Tamayo and
                  Jill P. Mesirov and
                  Shridar Ganesan and
                  Charles DeLisi and
                  Gyan Bhanot},
  title        = {Portraits of breast cancer progression},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-291},
  doi          = {10.1186/1471-2105-8-291},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DalginASTMGDB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EngelsYBMDG06,
  author       = {Reinhard Engels and
                  Tamara Yu and
                  Christopher B. Burge and
                  Jill P. Mesirov and
                  David DeCaprio and
                  James E. Galagan},
  title        = {Combo: a whole genome comparative browser},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {14},
  pages        = {1782--1783},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl193},
  doi          = {10.1093/BIOINFORMATICS/BTL193},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/EngelsYBMDG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GouldGMRM06,
  author       = {Joshua Gould and
                  Gad Getz and
                  Stefano Monti and
                  Michael Reich and
                  Jill P. Mesirov},
  title        = {Comparative gene marker selection suite},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {15},
  pages        = {1924--1925},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl196},
  doi          = {10.1093/BIOINFORMATICS/BTL196},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GouldGMRM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MikkelsenGM05,
  author       = {Tarjei S. Mikkelsen and
                  James E. Galagan and
                  Jill P. Mesirov},
  title        = {Improving genome annotations using phylogenetic profile anomaly detection},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {4},
  pages        = {464--470},
  year         = {2005},
  url          = {https://doi.org/10.1093/bioinformatics/bti027},
  doi          = {10.1093/BIOINFORMATICS/BTI027},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/MikkelsenGM05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiefeldRGZTM05,
  author       = {Ted Liefeld and
                  Michael Reich and
                  Joshua Gould and
                  Peili Zhang and
                  Pablo Tamayo and
                  Jill P. Mesirov},
  title        = {GeneCruiser: a web service for the annotation of microarray data},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {18},
  pages        = {3681--3682},
  year         = {2005},
  url          = {https://doi.org/10.1093/bioinformatics/bti587},
  doi          = {10.1093/BIOINFORMATICS/BTI587},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LiefeldRGZTM05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2005,
  editor       = {Satoru Miyano and
                  Jill P. Mesirov and
                  Simon Kasif and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Research in Computational Molecular Biology, 9th Annual International
                  Conference, {RECOMB} 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3500},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/b135594},
  doi          = {10.1007/B135594},
  isbn         = {3-540-25866-3},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/2005.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ReichOATM04,
  author       = {Michael Reich and
                  K. Ohm and
                  Michael Angelo and
                  Pablo Tamayo and
                  Jill P. Mesirov},
  title        = {GeneCluster 2.0: an advanced toolset for bioarray analysis},
  journal      = {Bioinform.},
  volume       = {20},
  number       = {11},
  pages        = {1797--1798},
  year         = {2004},
  url          = {https://doi.org/10.1093/bioinformatics/bth138},
  doi          = {10.1093/BIOINFORMATICS/BTH138},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ReichOATM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MukherjeeTRRECGM03,
  author       = {Sayan Mukherjee and
                  Pablo Tamayo and
                  Simon Rogers and
                  Ryan M. Rifkin and
                  Anna Engle and
                  Colin Campbell and
                  Todd R. Golub and
                  Jill P. Mesirov},
  title        = {Estimating Dataset Size Requirements for Classifying {DNA} Microarray
                  Data},
  journal      = {J. Comput. Biol.},
  volume       = {10},
  number       = {2},
  pages        = {119--142},
  year         = {2003},
  url          = {https://doi.org/10.1089/106652703321825928},
  doi          = {10.1089/106652703321825928},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/MukherjeeTRRECGM03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ml/MontiTMG03,
  author       = {Stefano Monti and
                  Pablo Tamayo and
                  Jill P. Mesirov and
                  Todd R. Golub},
  title        = {Consensus Clustering: {A} Resampling-Based Method for Class Discovery
                  and Visualization of Gene Expression Microarray Data},
  journal      = {Mach. Learn.},
  volume       = {52},
  number       = {1-2},
  pages        = {91--118},
  year         = {2003},
  url          = {https://doi.org/10.1023/A:1023949509487},
  doi          = {10.1023/A:1023949509487},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ml/MontiTMG03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamrev/RifkinMTRYARPLG03,
  author       = {Ryan M. Rifkin and
                  Sayan Mukherjee and
                  Pablo Tamayo and
                  Sridhar Ramaswamy and
                  Chen{-}Hsiang Yeang and
                  Michael Angelo and
                  Michael Reich and
                  Tomaso A. Poggio and
                  Eric S. Lander and
                  Todd R. Golub and
                  Jill P. Mesirov},
  title        = {An Analytical Method for Multiclass Molecular Cancer Classification},
  journal      = {{SIAM} Rev.},
  volume       = {45},
  number       = {4},
  pages        = {706--723},
  year         = {2003},
  url          = {https://doi.org/10.1137/S0036144502411986},
  doi          = {10.1137/S0036144502411986},
  timestamp    = {Tue, 29 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamrev/RifkinMTRYARPLG03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/YeangRTMRARLMG01,
  author       = {Chen{-}Hsiang Yeang and
                  Sridhar Ramaswamy and
                  Pablo Tamayo and
                  Sayan Mukherjee and
                  Ryan M. Rifkin and
                  Michael Angelo and
                  Michael Reich and
                  Eric S. Lander and
                  Jill P. Mesirov and
                  Todd R. Golub},
  title        = {Molecular classification of multiple tumor types},
  booktitle    = {Proceedings of the Ninth International Conference on Intelligent Systems
                  for Molecular Biology, July 21-25, 2001, Copenhagen, Denmark},
  pages        = {316--322},
  year         = {2001},
  timestamp    = {Sun, 28 Apr 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/YeangRTMRARLMG01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BatzoglouBML00,
  author       = {Serafim Batzoglou and
                  Bonnie Berger and
                  Jill P. Mesirov and
                  Eric S. Lander},
  editor       = {Ron Shamir and
                  Satoru Miyano and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Sequencing a genome by walking with clone-end sequences: a mathematical
                  analysis (abstract)},
  booktitle    = {Proceedings of the Fourth Annual International Conference on Computational
                  Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
  pages        = {45},
  publisher    = {{ACM}},
  year         = {2000},
  url          = {https://doi.org/10.1145/332306.332325},
  doi          = {10.1145/332306.332325},
  timestamp    = {Mon, 13 May 2019 09:30:09 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BatzoglouBML00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BatzoglouPMBL00,
  author       = {Serafim Batzoglou and
                  Lior Pachter and
                  Jill P. Mesirov and
                  Bonnie Berger and
                  Eric S. Lander},
  editor       = {Ron Shamir and
                  Satoru Miyano and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Human and mouse gene structure: comparative analysis and application
                  to exon prediction},
  booktitle    = {Proceedings of the Fourth Annual International Conference on Computational
                  Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
  pages        = {46--53},
  publisher    = {{ACM}},
  year         = {2000},
  url          = {https://doi.org/10.1145/332306.332326},
  doi          = {10.1145/332306.332326},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BatzoglouPMBL00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SlonimTMGL00,
  author       = {Donna K. Slonim and
                  Pablo Tamayo and
                  Jill P. Mesirov and
                  Todd R. Golub and
                  Eric S. Lander},
  editor       = {Ron Shamir and
                  Satoru Miyano and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Class prediction and discovery using gene expression data},
  booktitle    = {Proceedings of the Fourth Annual International Conference on Computational
                  Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
  pages        = {263--272},
  publisher    = {{ACM}},
  year         = {2000},
  url          = {https://doi.org/10.1145/332306.332564},
  doi          = {10.1145/332306.332564},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/SlonimTMGL00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/MesirovS99,
  author       = {Jill P. Mesirov and
                  Donna K. Slonim},
  title        = {Computational biology},
  journal      = {Comput. Sci. Eng.},
  volume       = {1},
  number       = {3},
  pages        = {16--17},
  year         = {1999},
  url          = {https://doi.org/10.1109/MCISE.1999.764211},
  doi          = {10.1109/MCISE.1999.764211},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cse/MesirovS99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamjo/McKennaMZ95,
  author       = {Mike McKenna and
                  Jill P. Mesirov and
                  Stavros A. Zenios},
  title        = {Data Parallel Quadratic Programming on Box-Constrained Problems},
  journal      = {{SIAM} J. Optim.},
  volume       = {5},
  number       = {3},
  pages        = {570--589},
  year         = {1995},
  url          = {https://doi.org/10.1137/0805029},
  doi          = {10.1137/0805029},
  timestamp    = {Mon, 08 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamjo/McKennaMZ95.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/BrunetEM94,
  author       = {Jean{-}Philippe Brunet and
                  Alan Edelman and
                  Jill P. Mesirov},
  title        = {Erratum: Hypercube Algorithms for Direct N-Body Solvers for Different
                  Granularities},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {15},
  number       = {1},
  pages        = {238},
  year         = {1994},
  url          = {https://doi.org/10.1137/0915017},
  doi          = {10.1137/0915017},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/BrunetEM94.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/BrunetME93,
  author       = {Jean{-}Philippe Brunet and
                  Jill P. Mesirov and
                  Alan Edelman},
  title        = {Hypercube Algorithms for Direct N-Body Solvers for Different Granularities},
  journal      = {{SIAM} J. Sci. Comput.},
  volume       = {14},
  number       = {5},
  pages        = {1143--1158},
  year         = {1993},
  url          = {https://doi.org/10.1137/0914068},
  doi          = {10.1137/0914068},
  timestamp    = {Thu, 30 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamsc/BrunetME93.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/SethianBGM91,
  author       = {James A. Sethian and
                  Jean{-}Philippe Brunet and
                  Adam Greenberg and
                  Jill P. Mesirov},
  editor       = {Joanne L. Martin},
  title        = {Computing turbulent flow in complex geometries on a massively parallel
                  processor},
  booktitle    = {Proceedings Supercomputing '91, Albuquerque, NM, USA, November 18-22,
                  1991},
  pages        = {230--241},
  publisher    = {{ACM}},
  year         = {1991},
  url          = {https://doi.org/10.1145/125826.125954},
  doi          = {10.1145/125826.125954},
  timestamp    = {Wed, 16 Oct 2019 14:14:57 +0200},
  biburl       = {https://dblp.org/rec/conf/sc/SethianBGM91.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/TamayoMB91,
  author       = {Pablo Tamayo and
                  Jill P. Mesirov and
                  Bruce M. Boghosian},
  editor       = {Joanne L. Martin},
  title        = {Parallel approaches to short range molecular dynamics simulations},
  booktitle    = {Proceedings Supercomputing '91, Albuquerque, NM, USA, November 18-22,
                  1991},
  pages        = {462--470},
  publisher    = {{ACM}},
  year         = {1991},
  url          = {https://doi.org/10.1145/125826.126067},
  doi          = {10.1145/125826.126067},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sc/TamayoMB91.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pc/ZhangMMW90,
  author       = {Xiru Zhang and
                  Michael McKenna and
                  Jill P. Mesirov and
                  David L. Waltz},
  title        = {The backpropagation algorithm on grid and hypercube architectures},
  journal      = {Parallel Comput.},
  volume       = {14},
  number       = {3},
  pages        = {317--327},
  year         = {1990},
  url          = {https://doi.org/10.1016/0167-8191(90)90084-M},
  doi          = {10.1016/0167-8191(90)90084-M},
  timestamp    = {Sat, 22 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/pc/ZhangMMW90.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/BrunetEM90,
  author       = {Jean{-}Philippe Brunet and
                  Alan Edelman and
                  Jill P. Mesirov},
  editor       = {Joanne L. Martin and
                  Daniel V. Pryor and
                  Gary R. Montry},
  title        = {An optional hypercube direct \emph{N}-body solver on the connection
                  machine},
  booktitle    = {Proceedings Supercomputing '90, New York, NY, USA, November 12-16,
                  1990},
  pages        = {748--752},
  publisher    = {{IEEE} Computer Society},
  year         = {1990},
  url          = {https://doi.org/10.1109/SUPERC.1990.130096},
  doi          = {10.1109/SUPERC.1990.130096},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sc/BrunetEM90.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tjs/LanderMT89,
  author       = {Eric S. Lander and
                  Jill P. Mesirov and
                  Washington Taylor},
  title        = {Study of protein sequence comparison metrics on the connection machine
                  {CM-2}},
  journal      = {J. Supercomput.},
  volume       = {3},
  number       = {4},
  pages        = {255--269},
  year         = {1989},
  url          = {https://doi.org/10.1007/BF00128166},
  doi          = {10.1007/BF00128166},
  timestamp    = {Fri, 22 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tjs/LanderMT89.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/ZhangMMW89,
  author       = {Xiru Zhang and
                  Michael McKenna and
                  Jill P. Mesirov and
                  David L. Waltz},
  editor       = {David S. Touretzky},
  title        = {An Efficient Implementation of the Back-propagation Algorithm on the
                  Connection Machine {CM-2}},
  booktitle    = {Advances in Neural Information Processing Systems 2, {[NIPS} Conference,
                  Denver, Colorado, USA, November 27-30, 1989]},
  pages        = {801--809},
  publisher    = {Morgan Kaufmann},
  year         = {1989},
  url          = {http://papers.nips.cc/paper/281-an-efficient-implementation-of-the-back-propagation-algorithm-on-the-connection-machine-cm-2},
  timestamp    = {Mon, 16 May 2022 15:41:51 +0200},
  biburl       = {https://dblp.org/rec/conf/nips/ZhangMMW89.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/ZhangWM89,
  author       = {Xiru Zhang and
                  David L. Waltz and
                  Jill P. Mesirov},
  editor       = {F. Ron Bailey},
  title        = {Protein structure prediction by a data-level parallel algorithm},
  booktitle    = {Proceedings Supercomputing '89, Reno, NV, USA, November 12-17, 1989},
  pages        = {215--223},
  publisher    = {{ACM}},
  year         = {1989},
  url          = {https://doi.org/10.1145/76263.76286},
  doi          = {10.1145/76263.76286},
  timestamp    = {Wed, 16 Oct 2019 14:14:57 +0200},
  biburl       = {https://dblp.org/rec/conf/sc/ZhangWM89.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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