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BibTeX records: Bruno W. S. Sobral
@article{DBLP:journals/bioinformatics/MaoAWWSYS15, author = {Chunhong Mao and David Abraham and Alice R. Wattam and Meredith J. C. Wilson and Maulik Shukla and Hyun Seung Yoo and Bruno W. S. Sobral}, title = {Curation, integration and visualization of bacterial virulence factors in {PATRIC}}, journal = {Bioinform.}, volume = {31}, number = {2}, pages = {252--258}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btu631}, doi = {10.1093/BIOINFORMATICS/BTU631}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/MaoAWWSYS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WarrenABDEGHHLM15, author = {Andrew S. Warren and Cristina Aurrecoechea and Brian P. Brunk and Prerak Desai and Scott J. Emrich and Gloria I. Giraldo{-}Calder{\'{o}}n and Omar S. Harb and Deborah Hix and Daniel Lawson and Dustin Machi and Chunhong Mao and Michael McClelland and Eric K. Nordberg and Maulik Shukla and Leslie B. Vosshall and Alice R. Wattam and Rebecca Will and Hyun Seung Yoo and Bruno W. S. Sobral}, title = {RNA-Rocket: an RNA-Seq analysis resource for infectious disease research}, journal = {Bioinform.}, volume = {31}, number = {9}, pages = {1496--1498}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btv002}, doi = {10.1093/BIOINFORMATICS/BTV002}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WarrenABDEGHHLM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WattamADDDGGGHKMMNOOPSSSSVWWWYZZS14, author = {Alice R. Wattam and David Abraham and Oral Dalay and Terry Disz and Timothy Driscoll and Joseph L. Gabbard and Joseph J. Gillespie and Roger Gough and Deborah Hix and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Eric K. Nordberg and Robert Olson and Ross A. Overbeek and Gordon D. Pusch and Maulik Shukla and Julie Schulman and Rick L. Stevens and Daniel E. Sullivan and Veronika Vonstein and Andrew S. Warren and Rebecca Will and Meredith J. C. Wilson and Hyun Seung Yoo and Chengdong Zhang and Yan Zhang and Bruno W. S. Sobral}, title = {PATRIC, the bacterial bioinformatics database and analysis resource}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Database-Issue}, pages = {581--591}, year = {2014}, url = {https://doi.org/10.1093/nar/gkt1099}, doi = {10.1093/NAR/GKT1099}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WattamADDDGGGHKMMNOOPSSSSVWWWYZZS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PyysaloORSMWSTA12, author = {Sampo Pyysalo and Tomoko Ohta and Rafal Rak and Daniel E. Sullivan and Chunhong Mao and Chunxia Wang and Bruno W. S. Sobral and Jun'ichi Tsujii and Sophia Ananiadou}, title = {Overview of the ID, {EPI} and {REL} tasks of BioNLP Shared Task 2011}, journal = {{BMC} Bioinform.}, volume = {13}, number = {{S-11}}, pages = {S2}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-S11-S2}, doi = {10.1186/1471-2105-13-S11-S2}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PyysaloORSMWSTA12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/DriscollGMDSFHBS11, author = {Timothy Driscoll and Joseph L. Gabbard and Chunhong Mao and Oral Dalay and Maulik Shukla and Clark C. Freifeld and Anne Gatewood Hoen and John S. Brownstein and Bruno W. S. Sobral}, title = {Integration and visualization of host-pathogen data related to infectious diseases}, journal = {Bioinform.}, volume = {27}, number = {16}, pages = {2279--2287}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr391}, doi = {10.1093/BIOINFORMATICS/BTR391}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/DriscollGMDSFHBS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bionlp/PyysaloORSMWSTA11, author = {Sampo Pyysalo and Tomoko Ohta and Rafal Rak and Daniel E. Sullivan and Chunhong Mao and Chunxia Wang and Bruno W. S. Sobral and Jun'ichi Tsujii and Sophia Ananiadou}, editor = {Jun'ichi Tsujii and Jin{-}Dong Kim and Sampo Pyysalo}, title = {Overview of the Infectious Diseases {(ID)} task of BioNLP Shared Task 2011}, booktitle = {Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011}, pages = {26--35}, publisher = {Association for Computational Linguistics}, year = {2011}, url = {https://aclanthology.org/W11-1804/}, timestamp = {Fri, 06 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bionlp/PyysaloORSMWSTA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/SobralMSSZ11, author = {Bruno W. S. Sobral and Chunhong Mao and Maulik Shukla and Daniel E. Sullivan and Chengdong Zhang}, editor = {Ana L. N. Fred and Joaquim Filipe and Hugo Gamboa}, title = {Informatics-Driven Infectious Disease Research}, booktitle = {Biomedical Engineering Systems and Technologies - 4th International Joint Conference, {BIOSTEC} 2011, Rome, Italy, January 26-29, 2011, Revised Selected Papers}, series = {Communications in Computer and Information Science}, volume = {273}, pages = {3--11}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-29752-6\_1}, doi = {10.1007/978-3-642-29752-6\_1}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/biostec/SobralMSSZ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/Sobral11, author = {Bruno W. S. Sobral}, editor = {Pedro Vieira and Ana L. N. Fred and Joaquim Filipe and Hugo Gamboa}, title = {Informatics-driven Infectious Disease Research}, booktitle = {{BIODEVICES} 2011 - Proceedings of the International Conference on Biomedical Electronics and Devices, Rome, Italy, 26-29 January, 2011}, pages = {017}, publisher = {SciTePress}, year = {2011}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biostec/Sobral11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bionlp/PyysaloOCSMSTA10, author = {Sampo Pyysalo and Tomoko Ohta and Han{-}Cheol Cho and Daniel E. Sullivan and Chunhong Mao and Bruno W. S. Sobral and Jun'ichi Tsujii and Sophia Ananiadou}, editor = {K. Bretonnel Cohen and Dina Demner{-}Fushman and Sophia Ananiadou and John Pestian and Jun'ichi Tsujii and Bonnie L. Webber}, title = {Towards Event Extraction from Full Texts on Infectious Diseases}, booktitle = {Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, BioNLP@ACL 2010, Uppsala, Sweden, July 15, 2010}, pages = {132--140}, publisher = {Association for Computational Linguistics}, year = {2010}, url = {https://aclanthology.org/W10-1919/}, timestamp = {Fri, 06 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bionlp/PyysaloOCSMSTA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DriscollDMS09, author = {Tim Driscoll and Matthew D. Dyer and T. M. Murali and Bruno W. S. Sobral}, title = {{PIG} - the pathogen interaction gateway}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {647--650}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn799}, doi = {10.1093/NAR/GKN799}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DriscollDMS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiBST09, author = {Shenghua Li and Paul Brazhnik and Bruno W. S. Sobral and John J. Tyson}, title = {Temporal Controls of the Asymmetric Cell Division Cycle in \emph{Caulobacter crescentus}}, journal = {PLoS Comput. Biol.}, volume = {5}, number = {8}, year = {2009}, url = {https://doi.org/10.1371/journal.pcbi.1000463}, doi = {10.1371/JOURNAL.PCBI.1000463}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiBST09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ZhangCCWKSYSJLXZMMHCZMWS08, author = {C. Zhang and Oswald Crasta and Stephen A. Cammer and Rebecca Will and Ron Kenyon and Daniel E. Sullivan and Q. Yu and W. Sun and R. Jha and D. Liu and Tian Xue and Y. Zhang and M. Moore and Peter B. McGarvey and Hongzhan Huang and Yongxing Chen and J. Zhang and Raja Mazumder and Cathy H. Wu and Bruno W. S. Sobral}, title = {An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data}, journal = {Nucleic Acids Res.}, volume = {36}, number = {Database-Issue}, pages = {884--891}, year = {2008}, url = {https://doi.org/10.1093/nar/gkm903}, doi = {10.1093/NAR/GKM903}, timestamp = {Wed, 20 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ZhangCCWKSYSJLXZMMHCZMWS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiBST08, author = {Shenghua Li and Paul Brazhnik and Bruno W. S. Sobral and John J. Tyson}, title = {A Quantitative Study of the Division Cycle of \emph{Caulobacter crescentus} Stalked Cells}, journal = {PLoS Comput. Biol.}, volume = {4}, number = {1}, year = {2008}, url = {https://doi.org/10.1371/journal.pcbi.0040009}, doi = {10.1371/JOURNAL.PCBI.0040009}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiBST08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SnyderKLNKSSTXYZDDGHHHJKMMNPSYGGHABBKMRVCCDEKWSS07, author = {E. E. Snyder and N. Kampanya and J. Lu and Eric K. Nordberg and H. R. Karur and Maulik Shukla and Jeetendra Soneja and Y. Tian and Tian Xue and Hyun Seung Yoo and Fengkai Zhang and C. Dharmanolla and N. V. Dongre and Joseph J. Gillespie and J. Hamelius and M. Hance and K. I. Huntington and D. Jukneliene and J. Koziski and L. Mackasmiel and S. P. Mane and V. Nguyen and A. Purkayastha and J. Shallom and G. Yu and Y. Guo and Joseph L. Gabbard and Deborah Hix and A. F. Azad and S. C. Baker and S. M. Boyle and Y. Khudyakov and X. J. Meng and C. Rupprecht and J. Vinje and Oswald Crasta and M. J. Czar and Allan Dickerman and J. Dana Eckart and Ron Kenyon and Rebecca Will and Jo{\~{a}}o C. Setubal and Bruno W. S. Sobral}, title = {{PATRIC:} The {VBI} PathoSystems Resource Integration Center}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {401--406}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl858}, doi = {10.1093/NAR/GKL858}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SnyderKLNKSSTXYZDDGHHHJKMMNPSYGGHABBKMRVCCDEKWSS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/XueYWSKCS07, author = {Tian Xue and Boyu Yang and Rebecca Will and Bruce Sharp and Ron Kenyon and Oswald Crasta and Bruno W. S. Sobral}, editor = {Hamid R. Arabnia and Mary Qu Yang and Jack Y. Yang}, title = {A Generalized Framework for Pathosystems Informatics {\&} Bioinformatics Web Services}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2007, Volume I, June 25-28, 2007, Las Vegas Nevada, {USA}}, pages = {236--242}, publisher = {{CSREA} Press}, year = {2007}, timestamp = {Fri, 14 Dec 2007 13:10:25 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/XueYWSKCS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ismb/DyerMS07, author = {Matthew D. Dyer and T. M. Murali and Bruno W. S. Sobral}, title = {Computational prediction of host-pathogen protein-protein interactions}, booktitle = {Proceedings 15th International Conference on Intelligent Systems for Molecular Biology {(ISMB)} {\&} 6th European Conference on Computational Biology (ECCB), Vienna, Austria, July 21-25, 2007}, pages = {159--166}, year = {2007}, url = {https://doi.org/10.1093/bioinformatics/btm208}, doi = {10.1093/BIOINFORMATICS/BTM208}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ismb/DyerMS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/ZhaoXYWWWSKCS06, author = {Jing Zhao and Tian Xue and Boyu Yang and Kelly Williams and Alice R. Wattam and Rebecca Will and Bruce Sharp and Ron Kenyon and Oswald Crasta and Bruno W. S. Sobral}, editor = {Hamid R. Arabnia and Homayoun Valafar}, title = {Genome Annotation and Comparison System}, booktitle = {Proceedings of the 2006 International Conference on Bioinformatics {\&} Computational Biology, BIOCOMP'06, Las Vegas, Nevada, USA, June 26-29, 2006}, pages = {154--160}, publisher = {{CSREA} Press}, year = {2006}, timestamp = {Mon, 27 Nov 2006 11:07:54 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/ZhaoXYWWWSKCS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/YangXZKSLWSKCS06, author = {Boyu Yang and Tian Xue and Jing Zhao and Chaitanya Kommidi and Jeetendra Soneja and Jian Li and Rebecca Will and Bruce Sharp and Ron Kenyon and Oswald Crasta and Bruno W. S. Sobral}, editor = {Hamid R. Arabnia and Homayoun Valafar}, title = {Bioinformatics Web Services}, booktitle = {Proceedings of the 2006 International Conference on Bioinformatics {\&} Computational Biology, BIOCOMP'06, Las Vegas, Nevada, USA, June 26-29, 2006}, pages = {258--264}, publisher = {{CSREA} Press}, year = {2006}, timestamp = {Mon, 27 Nov 2006 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/YangXZKSLWSKCS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HeVWADES05, author = {Yongqun He and Richard R. Vines and Alice R. Wattam and Georgiy V. Abramochkin and Allan Dickerman and J. Dana Eckart and Bruno W. S. Sobral}, title = {{PIML:} the Pathogen Information Markup Language}, journal = {Bioinform.}, volume = {21}, number = {1}, pages = {116--121}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bth462}, doi = {10.1093/BIOINFORMATICS/BTH462}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/HeVWADES05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MaoQWCS05, author = {Chunhong Mao and Jing Qiu and Chunxia Wang and Trevor C. Charles and Bruno W. S. Sobral}, title = {NodMutDB: a database for genes and mutants involved in symbiosis}, journal = {Bioinform.}, volume = {21}, number = {12}, pages = {2927--2929}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti427}, doi = {10.1093/BIOINFORMATICS/BTI427}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MaoQWCS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/metmbs/YangENS05, author = {Boyu Yang and J. Dana Eckart and Eric K. Nordberg and Bruno W. S. Sobral}, editor = {Faramarz Valafar and Homayoun Valafar}, title = {ToolBus - An Interoperable Environment for Biological Researchers}, booktitle = {Proceedings of The 2005 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, {METMBS} 2005, Las Vegas, Nevada, USA, June 20-23, 2005}, pages = {274--280}, publisher = {{CSREA} Press}, year = {2005}, timestamp = {Wed, 15 Feb 2006 13:59:13 +0100}, biburl = {https://dblp.org/rec/conf/metmbs/YangENS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wob/Sobral05, author = {Bruno W. S. Sobral}, editor = {Jo{\~{a}}o C. Setubal and Sergio Verjovski{-}Almeida}, title = {Cyberinfrastructure for PathoSystems Biology}, booktitle = {Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, {BSB} 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3594}, pages = {11--27}, publisher = {Springer}, year = {2005}, url = {https://doi.org/10.1007/11532323\_3}, doi = {10.1007/11532323\_3}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wob/Sobral05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/omics/EckartS03, author = {J. Dana Eckart and Bruno W. S. Sobral}, title = {A Life Scientist's Gateway to Distributed Data Management and Computing: The PathPort/ToolBus Framework}, journal = {{OMICS}}, volume = {7}, number = {1}, pages = {79--88}, year = {2003}, url = {https://doi.org/10.1089/153623103322006661}, doi = {10.1089/153623103322006661}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/omics/EckartS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SiepelFTZMBS01, author = {Adam C. Siepel and Andrew D. Farmer and Andrew N. Tolopko and Mingzhe Zhuang and Pedro Mendes and William D. Beavis and Bruno W. S. Sobral}, title = {{ISYS:} a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources}, journal = {Bioinform.}, volume = {17}, number = {1}, pages = {83--94}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.1.83}, doi = {10.1093/BIOINFORMATICS/17.1.83}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/SiepelFTZMBS01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HualaDGWRLHKZHMBBSBMTSR01, author = {Eva Huala and Allan Dickerman and Margarita Garcia{-}Hernandez and Danforth Weems and Leonore Reiser and Frank LaFond and David Hanley and Donald Kiphart and Mingzhe Zhuang and Wen Huang and Lukas A. Mueller and Debika Bhattacharyya and Devaki Bhaya and Bruno W. S. Sobral and William D. Beavis and David Meinke and Christopher D. Town and Chris Somerville and Seung Yon Rhee}, title = {The Arabidopsis Information Resource {(TAIR):} a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant}, journal = {Nucleic Acids Res.}, volume = {29}, number = {1}, pages = {102--105}, year = {2001}, url = {https://doi.org/10.1093/nar/29.1.102}, doi = {10.1093/NAR/29.1.102}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HualaDGWRLHKZHMBBSBMTSR01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WaughHWWCIKS00, author = {Mark E. Waugh and Peter T. Hraber and Jennifer W. Weller and Yihe Wu and Guanghong Chen and Jeff T. Inman and Donald Kiphart and Bruno W. S. Sobral}, title = {The Phytophthora Genome Initiative Database: informatics and analysis for distributed pathogenomic research}, journal = {Nucleic Acids Res.}, volume = {28}, number = {1}, pages = {87--90}, year = {2000}, url = {https://doi.org/10.1093/nar/28.1.87}, doi = {10.1093/NAR/28.1.87}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/WaughHWWCIKS00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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