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ORCIDBibTeX records: Jason L. Stein
@article{DBLP:journals/neuroimage/LemaitreGTSPMFF23,
author = {Herv{\'{e}} Lema{\^{\i}}tre and
Yann Le Guen and
Amanda K. Tilot and
Jason L. Stein and
Cathy Philippe and
Jean{-}Fran{\c{c}}ois Mangin and
Simon E. Fisher and
Vincent Frouin},
title = {Genetic variations within human gained enhancer elements affect human
brain sulcal morphology},
journal = {NeuroImage},
volume = {265},
pages = {119773},
year = {2023},
url = {https://doi.org/10.1016/j.neuroimage.2022.119773},
doi = {10.1016/J.NEUROIMAGE.2022.119773},
timestamp = {Tue, 17 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/LemaitreGTSPMFF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WeiDDMKKBSW23,
author = {Ziquan Wei and
Tingting Dan and
Jiaqi Ding and
Carolyn M. McCormick and
Felix A. Kyere and
Minjeong Kim and
David Borland and
Jason L. Stein and
Guorong Wu},
title = {High Throughput Deep Model of 3D Nucleus Instance Segmentation by
Stereo Stitching Contextual Gaps},
booktitle = {20th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2023, Cartagena, Colombia, April 18-21, 2023},
pages = {1--5},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ISBI53787.2023.10230745},
doi = {10.1109/ISBI53787.2023.10230745},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/WeiDDMKKBSW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GuoKSWK22,
author = {Yue Guo and
Oleh Krupa and
Jason L. Stein and
Guorong Wu and
Ashok Kumar Krishnamurthy},
title = {SAU-Net: {A} Unified Network for Cell Counting in 2D and 3D Microscopy
Images},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {4},
pages = {1920--1932},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3089608},
doi = {10.1109/TCBB.2021.3089608},
timestamp = {Fri, 01 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/GuoKSWK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/GuoBMSWK22,
author = {Yue Guo and
David Borland and
Carolyn M. McCormick and
Jason L. Stein and
Guorong Wu and
Ashok Kumar Krishnamurthy},
editor = {Yuankai Huo and
Bryan A. Millis and
Yuyin Zhou and
Xiangxue Wang and
Adam P. Harrison and
Ziyue Xu},
title = {Cell Counting with Inverse Distance Kernel and Self-supervised Learning},
booktitle = {Medical Optical Imaging and Virtual Microscopy Image Analysis - First
International Workshop, {MOVI} 2022, Held in Conjunction with {MICCAI}
2022, Singapore, September 18, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13578},
pages = {1--10},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-16961-8\_1},
doi = {10.1007/978-3-031-16961-8\_1},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/GuoBMSWK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BorlandMPKMBFEO21,
author = {David Borland and
Carolyn M. McCormick and
Niyanta K. Patel and
Oleh Krupa and
Jessica T. Mory and
Alvaro A. Beltran and
Tala M. Farah and
Carla F. Escobar{-}Tomlienovich and
Sydney S. Olson and
Minjeong Kim and
Guorong Wu and
Jason L. Stein},
title = {Segmentor: a tool for manual refinement of 3D microscopy annotations},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {260},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04202-8},
doi = {10.1186/S12859-021-04202-8},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BorlandMPKMBFEO21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/MaKGMBKS021,
author = {Junbo Ma and
Oleh Krupa and
Madison Rose Glass and
Carolyn M. McCormick and
David Borland and
Minjeong Kim and
Jason L. Stein and
Guorong Wu},
editor = {Aasa Feragen and
Stefan Sommer and
Julia A. Schnabel and
Mads Nielsen},
title = {3D Nucleus Instance Segmentation for Whole-Brain Microscopy Images},
booktitle = {Information Processing in Medical Imaging - 27th International Conference,
{IPMI} 2021, Virtual Event, June 28-June 30, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12729},
pages = {504--516},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-78191-0\_39},
doi = {10.1007/978-3-030-78191-0\_39},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipmi/MaKGMBKS021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuoS0K19,
author = {Yue Guo and
Jason L. Stein and
Guorong Wu and
Ashok K. Krishnamurthy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {SAU-Net: {A} Universal Deep Network for Cell Counting},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {299--306},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342153},
doi = {10.1145/3307339.3342153},
timestamp = {Fri, 01 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GuoS0K19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/GuoWKS0BK19,
author = {Yue Guo and
Qian Wang and
Oleh Krupa and
Jason L. Stein and
Guorong Wu and
Kira Bradford and
Ashok K. Krishnamurthy},
editor = {Ignacio Rojas and
Olga Valenzuela and
Fernando Rojas and
Francisco M. Ortu{\~{n}}o Guzman},
title = {Cross Modality Microscopy Segmentation via Adversarial Adaptation},
booktitle = {Bioinformatics and Biomedical Engineering - 7th International Work-Conference,
{IWBBIO} 2019, Granada, Spain, May 8-10, 2019, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {11466},
pages = {469--478},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-17935-9\_42},
doi = {10.1007/978-3-030-17935-9\_42},
timestamp = {Mon, 05 Feb 2024 20:33:18 +0100},
biburl = {https://dblp.org/rec/conf/iwbbio/GuoWKS0BK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/WangWZLHGCSFBZK17,
author = {Qian Wang and
Shaoyu Wang and
Xiaofeng Zhu and
Tianyi Liu and
Zachary Humphrey and
Vladimir Ghukasyan and
Mike Conway and
Erik Scott and
Giulia Fragola and
Kira Bradford and
Mark J. Zylka and
Ashok K. Krishnamurthy and
Jason L. Stein and
Guorong Wu},
editor = {Guorong Wu and
Brent C. Munsell and
Yiqiang Zhan and
Wenjia Bai and
Gerard Sanroma and
Pierrick Coup{\'{e}}},
title = {Accurate and High Throughput Cell Segmentation Method for Mouse Brain
Nuclei Using Cascaded Convolutional Neural Network},
booktitle = {Patch-Based Techniques in Medical Imaging - Third International Workshop,
Patch-MI 2017, Held in Conjunction with {MICCAI} 2017, Quebec City,
QC, Canada, September 14, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10530},
pages = {55--62},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-67434-6\_7},
doi = {10.1007/978-3-319-67434-6\_7},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/WangWZLHGCSFBZK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/HibarSJKTMZMMWWT13,
author = {Derrek P. Hibar and
Jason L. Stein and
Neda Jahanshad and
Omid Kohannim and
Arthur W. Toga and
Katie McMahon and
Greig I. de Zubicaray and
Grant W. Montgomery and
Nicholas G. Martin and
Margaret J. Wright and
Michael W. Weiner and
Paul M. Thompson},
editor = {Kensaku Mori and
Ichiro Sakuma and
Yoshinobu Sato and
Christian Barillot and
Nassir Navab},
title = {Exhaustive Search of the {SNP-SNP} Interactome Identifies Epistatic
Effects on Brain Volume in Two Cohorts},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2013 - 16th International Conference, Nagoya, Japan, September 22-26,
2013, Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {8151},
pages = {600--607},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40760-4\_75},
doi = {10.1007/978-3-642-40760-4\_75},
timestamp = {Sun, 02 Jun 2019 21:24:51 +0200},
biburl = {https://dblp.org/rec/conf/miccai/HibarSJKTMZMMWWT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/HibarMSKSSZMMMWDAAT13,
author = {Derrek P. Hibar and
Sarah E. Medland and
Jason L. Stein and
Sungeun Kim and
Li Shen and
Andrew J. Saykin and
Greig I. de Zubicaray and
Katie McMahon and
Grant W. Montgomery and
Nicholas G. Martin and
Margaret J. Wright and
Srdjan Djurovic and
Ingrid Agartz and
Ole A. Andreassen and
Paul M. Thompson},
editor = {Kensaku Mori and
Ichiro Sakuma and
Yoshinobu Sato and
Christian Barillot and
Nassir Navab},
title = {Genetic Clustering on the Hippocampal Surface for Genome-Wide Association
Studies},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2013 - 16th International Conference, Nagoya, Japan, September 22-26,
2013, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {8150},
pages = {690--697},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40763-5\_85},
doi = {10.1007/978-3-642-40763-5\_85},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/miccai/HibarMSKSSZMMMWDAAT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/VounouJWSTRM12,
author = {Maria Vounou and
Eva Janousov{\'{a}} and
Robin Wolz and
Jason L. Stein and
Paul M. Thompson and
Daniel Rueckert and
Giovanni Montana},
title = {Sparse reduced-rank regression detects genetic associations with voxel-wise
longitudinal phenotypes in Alzheimer's disease},
journal = {NeuroImage},
volume = {60},
number = {1},
pages = {700--716},
year = {2012},
url = {https://doi.org/10.1016/j.neuroimage.2011.12.029},
doi = {10.1016/J.NEUROIMAGE.2011.12.029},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/VounouJWSTRM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/LutkenhoffKGSTCJ12,
author = {Evan Lutkenhoff and
Katherine H. Karlsgodt and
Boris Gutman and
Jason L. Stein and
Paul M. Thompson and
Tyrone D. Cannon and
J. David Jentsch},
title = {Structural and functional neuroimaging phenotypes in dysbindin mutant
mice},
journal = {NeuroImage},
volume = {62},
number = {1},
pages = {120--129},
year = {2012},
url = {https://doi.org/10.1016/j.neuroimage.2012.05.008},
doi = {10.1016/J.NEUROIMAGE.2012.05.008},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/LutkenhoffKGSTCJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/KohannimHJSHTJWT12,
author = {Omid Kohannim and
Derrek P. Hibar and
Neda Jahanshad and
Jason L. Stein and
Xue Hua and
Arthur W. Toga and
Clifford R. Jack and
Michael W. Weiner and
Paul M. Thompson},
title = {Predicting temporal lobe volume on {MRI} from genotypes using L\({}^{\mbox{1}}\)-L\({}^{\mbox{2}}\)
regularized regression},
booktitle = {9th {IEEE} International Symposium on Biomedical Imaging: From Nano
to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings},
pages = {1160--1163},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/ISBI.2012.6235766},
doi = {10.1109/ISBI.2012.6235766},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/isbi/KohannimHJSHTJWT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/HibarSKJSSKPFHPJWTT11,
author = {Derrek P. Hibar and
Jason L. Stein and
Omid Kohannim and
Neda Jahanshad and
Andrew J. Saykin and
Li Shen and
Sungeun Kim and
Nathan Pankratz and
Tatiana Foroud and
Matthew J. Huentelman and
Steven G. Potkin and
Clifford R. Jack Jr. and
Michael W. Weiner and
Arthur W. Toga and
Paul M. Thompson},
title = {Voxelwise gene-wide association study (vGeneWAS): Multivariate gene-based
association testing in 731 elderly subjects},
journal = {NeuroImage},
volume = {56},
number = {4},
pages = {1875--1891},
year = {2011},
url = {https://doi.org/10.1016/j.neuroimage.2011.03.077},
doi = {10.1016/J.NEUROIMAGE.2011.03.077},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/HibarSKJSSKPFHPJWTT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/HibarSKJJWTT11,
author = {Derrek P. Hibar and
Jason L. Stein and
Omid Kohannim and
Neda Jahanshad and
Clifford R. Jack and
Michael Weiner and
Arthur W. Toga and
Paul M. Thompson},
title = {Principal components regression: Multivariate, gene-based tests in
imaging genomics},
booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical
Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011,
Chicago, Illinois, {USA}},
pages = {289--293},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/ISBI.2011.5872408},
doi = {10.1109/ISBI.2011.5872408},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/HibarSKJJWTT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/KohannimHSJJWTT11,
author = {Omid Kohannim and
Derrek P. Hibar and
Jason L. Stein and
Neda Jahanshad and
Clifford R. Jack and
Michael Weiner and
Arthur W. Toga and
Paul M. Thompson},
title = {Boosting power to detect genetic associations in imaging using multi-locus,
genome-wide scans and ridge regression},
booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical
Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011,
Chicago, Illinois, {USA}},
pages = {1855--1859},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/ISBI.2011.5872769},
doi = {10.1109/ISBI.2011.5872769},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbi/KohannimHSJJWTT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SteinHMLHHLTSKESSFPHCGACSWDPJWT10,
author = {Jason L. Stein and
Xue Hua and
Jonathan H. Morra and
Suh Lee and
Derrek P. Hibar and
April J. Ho and
Alex D. Leow and
Arthur W. Toga and
Jae Hoon Sul and
Hyun Min Kang and
Eleazar Eskin and
Andrew J. Saykin and
Li Shen and
Tatiana Foroud and
Nathan Pankratz and
Matthew J. Huentelman and
David W. Craig and
Jill D. Gerber and
April N. Allen and
Jason J. Corneveaux and
Dietrich A. Stephan and
Jennifer Webster and
Bryan M. DeChairo and
Steven G. Potkin and
Clifford R. Jack Jr. and
Michael W. Weiner and
Paul M. Thompson},
title = {Genome-wide analysis reveals novel genes influencing temporal lobe
structure with relevance to neurodegeneration in Alzheimer's disease},
journal = {NeuroImage},
volume = {51},
number = {2},
pages = {542--554},
year = {2010},
url = {https://doi.org/10.1016/j.neuroimage.2010.02.068},
doi = {10.1016/J.NEUROIMAGE.2010.02.068},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SteinHMLHHLTSKESSFPHCGACSWDPJWT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SteinHLHLTSSFPHCGACDPWTa10,
author = {Jason L. Stein and
Xue Hua and
Suh Lee and
April J. Ho and
Alex D. Leow and
Arthur W. Toga and
Andrew J. Saykin and
Li Shen and
Tatiana Foroud and
Nathan Pankratz and
Matthew J. Huentelman and
David W. Craig and
Jill D. Gerber and
April N. Allen and
Jason J. Corneveaux and
Bryan M. DeChairo and
Steven G. Potkin and
Michael W. Weiner and
Paul M. Thompson and
Alzheimer's Disease Neuroimaging Initiative},
title = {Voxelwise genome-wide association study (vGWAS)},
journal = {NeuroImage},
volume = {53},
number = {3},
pages = {1160--1174},
year = {2010},
url = {https://doi.org/10.1016/j.neuroimage.2010.02.032},
doi = {10.1016/J.NEUROIMAGE.2010.02.032},
timestamp = {Wed, 24 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SteinHLHLTSSFPHCGACDPWTa10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SteinWBWZMM08,
author = {Jason L. Stein and
Lisa M. Wiedholz and
Danielle S. Bassett and
Daniel R. Weinberger and
Caroline F. Zink and
Venkata S. Mattay and
Andreas Meyer{-}Lindenberg},
title = {Corrigendum to "A validated network of effective amygdala connectivity"
[NeuroImage 36 {(2007)} 736-745]},
journal = {NeuroImage},
volume = {39},
number = {1},
pages = {548},
year = {2008},
url = {https://doi.org/10.1016/j.neuroimage.2007.03.081},
doi = {10.1016/J.NEUROIMAGE.2007.03.081},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SteinWBWZMM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SteinWBWZMM07,
author = {Jason L. Stein and
Lisa M. Wiedholz and
Danielle S. Bassett and
Daniel R. Weinberger and
Caroline F. Zink and
Venkata S. Mattay and
Andreas Meyer{-}Lindenberg},
title = {A validated network of effective amygdala connectivity},
journal = {NeuroImage},
volume = {36},
number = {3},
pages = {736--745},
year = {2007},
url = {https://doi.org/10.1016/j.neuroimage.2007.03.022},
doi = {10.1016/J.NEUROIMAGE.2007.03.022},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SteinWBWZMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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