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BibTeX records: Julie M. Sullivan
@article{DBLP:journals/biodb/LyneBBCHHKLRSSW22, author = {Rachel Lyne and Adri{\'{a}}n Bazaga and Daniela Butano and Sergio Contrino and Joshua Heimbach and Fengyuan Hu and Alex Kalderimis and Mike Lyne and Kevin Herald Reierskog and Radek Stepan and Julie M. Sullivan and Archie Wise and Yo Yehudi and Gos Micklem}, title = {HumanMine: advanced data searching, analysis and cross-species comparison}, journal = {Database J. Biol. Databases Curation}, volume = {2022}, number = {2022}, year = {2022}, url = {https://doi.org/10.1093/database/baac054}, doi = {10.1093/DATABASE/BAAC054}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/LyneBBCHHKLRSSW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KyritsisWSLM19, author = {Konstantinos A Kyritsis and Bing Wang and Julie M. Sullivan and Rachel Lyne and Gos Micklem}, title = {InterMineR: an {R} package for InterMine databases}, journal = {Bioinform.}, volume = {35}, number = {17}, pages = {3206--3207}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/btz039}, doi = {10.1093/BIOINFORMATICS/BTZ039}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/KyritsisWSLM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/swat4ls/ButanoCCHLRSYM19, author = {Daniela Butano and Justin Clark{-}Casey and Sergio Contrino and Joshua Heimbach and Rachel Lyne and Kevin Herald Reierskog and Julie M. Sullivan and Yo Yehudi and Gos Micklem}, editor = {Ronald Cornet and Andra Waagmeester}, title = {Implementing {FAIR} Principles in InterMine}, booktitle = {12th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences}, series = {{CEUR} Workshop Proceedings}, volume = {2849}, pages = {137--138}, publisher = {CEUR-WS.org}, year = {2019}, url = {https://ceur-ws.org/Vol-2849/paper-19.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:02 +0100}, biburl = {https://dblp.org/rec/conf/swat4ls/ButanoCCHLRSYM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DumousseauKSARd18, author = {M. Sivade Dumousseau and Maximilian Koch and Anjali Shrivastava and Diego Alonso{-}L{\'{o}}pez and Javier De Las Rivas and Noemi del{-}Toro and Colin W. Combe and Birgit H. M. Meldal and Joshua Heimbach and Juri Rappsilber and Julie M. Sullivan and Yo Yehudi and Sandra E. Orchard}, title = {{JAMI:} a Java library for molecular interactions and data interoperability}, journal = {{BMC} Bioinform.}, volume = {19}, number = {1}, pages = {133:1--133:9}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2119-0}, doi = {10.1186/S12859-018-2119-0}, timestamp = {Mon, 19 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/DumousseauKSARd18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DumousseauAABCC18, author = {M. Sivade Dumousseau and Diego Alonso{-}L{\'{o}}pez and Mais G. Ammari and Glyn Bradley and Nancy H. Campbell and Arnaud C{\'{e}}ol and Gianni Cesareni and Colin W. Combe and Javier De Las Rivas and Noemi del{-}Toro and Joshua Heimbach and Henning Hermjakob and Igor Jurisica and Maximilian Koch and Luana Licata and Ruth C. Lovering and David J. Lynn and Birgit H. M. Meldal and Gos Micklem and Simona Panni and Pablo Porras and Sylvie Ricard{-}Blum and Bernd Roechert and Lukasz Salw{\'{\i}}nski and Anjali Shrivastava and Julie M. Sullivan and Nicolas Thierry{-}Mieg and Yo Yehudi and Kim Van Roey and Sandra E. Orchard}, title = {Encompassing new use cases - level 3.0 of the {HUPO-PSI} format for molecular interactions}, journal = {{BMC} Bioinform.}, volume = {19}, number = {1}, pages = {134:1--134:8}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2118-1}, doi = {10.1186/S12859-018-2118-1}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/DumousseauAABCC18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/f1000research/KomkovaLSYM18, author = {Daria Komkova and Rachel Lyne and Julie M. Sullivan and Yo Yehudi and Gos Micklem}, title = {The InterMine Android app: Cross-organism genomic data in your pocket}, journal = {F1000Research}, volume = {7}, pages = {1837}, year = {2018}, url = {https://doi.org/10.12688/f1000research.17005.1}, doi = {10.12688/F1000RESEARCH.17005.1}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/f1000research/KomkovaLSYM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/semco/RheeSSMKG16, author = {David Rhee and Kevin R. Shieh and Julie M. Sullivan and Gos Micklem and Kami Kim and Aaron Golden}, title = {Understanding the Systems Biology of Pathogen Virulence Using Semantic Methodologies}, booktitle = {Tenth {IEEE} International Conference on Semantic Computing, {ICSC} 2016, Laguna Hills, CA, USA, February 4-6, 2016}, pages = {314--320}, publisher = {{IEEE} Computer Society}, year = {2016}, url = {https://doi.org/10.1109/ICSC.2016.33}, doi = {10.1109/ICSC.2016.33}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/semco/RheeSSMKG16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/semweb/DeraspeKBSMCCD16, author = {Maxime D{\'{e}}raspe and Kalpana Karra and Gail Binkley and Julie M. Sullivan and Gos Micklem and Jacques Corbeil and J. Michael Cherry and Michel Dumontier}, editor = {Cui Tao and Guoqian Jiang and Dezhao Song and Jeff Heflin and Frank Schilder}, title = {Semantic Research Platform for Model Organisms}, booktitle = {Proceedings of the First International Workshop on Biomedical Data Integration and Discovery {(BMDID} 2016) co-located with The 15th International Semantic Web Conference {(ISWC} 2016), Kobe, Japan, October 17, 2016}, series = {{CEUR} Workshop Proceedings}, volume = {1709}, publisher = {CEUR-WS.org}, year = {2016}, url = {https://ceur-ws.org/Vol-1709/BMDID\_2016\_paper\_1.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:07 +0100}, biburl = {https://dblp.org/rec/conf/semweb/DeraspeKBSMCCD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/swat4ls/DeraspeBBCCCCCH16, author = {Maxime D{\'{e}}raspe and Gail Binkley and Daniela Butano and Matthew Chadwick and J. Michael Cherry and Justin Clark{-}Casey and Sergio Contrino and Jacques Corbeil and Joshua Heimbach and Kalpana Karra and Rachel Lyne and Julie M. Sullivan and Yo Yehudi and Gos Micklem and Michel Dumontier}, editor = {Adrian Paschke and Albert Burger and Andrea Splendiani and M. Scott Marshall and Paolo Romano}, title = {Making Linked Data {SPARQL} with the InterMine Biological Data Warehouse}, booktitle = {Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, Amsterdam, The Netherlands, December 5-8, 2016}, series = {{CEUR} Workshop Proceedings}, volume = {1795}, publisher = {CEUR-WS.org}, year = {2016}, url = {https://ceur-ws.org/Vol-1795/paper8.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:02 +0100}, biburl = {https://dblp.org/rec/conf/swat4ls/DeraspeBBCCCCCH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/RheeCSSMKG15, author = {David B. Rhee and Matthew McKnight Croken and Kevin R. Shieh and Julie M. Sullivan and Gos Micklem and Kami Kim and Aaron Golden}, title = {toxoMine: an integrated omics data warehouse for \emph{Toxoplasma gondii} systems biology research}, journal = {Database J. Biol. Databases Curation}, volume = {2015}, year = {2015}, url = {https://doi.org/10.1093/database/bav066}, doi = {10.1093/DATABASE/BAV066}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/RheeCSSMKG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KrishnakumarHCFKKRCMMSSKMMVT15, author = {Vivek Krishnakumar and Matthew R. Hanlon and Sergio Contrino and Erik S. Ferlanti and Svetlana Karamycheva and Maria Kim and Benjamin D. Rosen and Chia{-}Yi Cheng and Walter Moreira and Stephen A. Mock and Joseph Stubbs and Julie M. Sullivan and Konstantinos Krampis and Jason R. Miller and Gos Micklem and Matthew Vaughn and Christopher D. Town}, title = {Araport: the Arabidopsis Information Portal}, journal = {Nucleic Acids Res.}, volume = {43}, number = {Database-Issue}, pages = {1003--1009}, year = {2015}, url = {https://doi.org/10.1093/nar/gku1200}, doi = {10.1093/NAR/GKU1200}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KrishnakumarHCFKKRCMMSSKMMVT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KalderimisLBCLHHSSSM14, author = {Alex Kalderimis and Rachel Lyne and Daniela Butano and Sergio Contrino and Mike Lyne and Joshua Heimbach and Fengyuan Hu and Richard N. Smith and Radek Stepan and Julie M. Sullivan and Gos Micklem}, title = {InterMine: extensive web services for modern biology}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Webserver-Issue}, pages = {468--472}, year = {2014}, url = {https://doi.org/10.1093/nar/gku301}, doi = {10.1093/NAR/GKU301}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KalderimisLBCLHHSSSM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/f1000research/KalderimisSSLLM14, author = {Alex Kalderimis and Radek Stepan and Julie M. Sullivan and Rachel Lyne and Michael Lyne and Gos Micklem}, title = {\emph{BioJS InterMine List Analysis}: {A} BioJS component for displaying graphical or statistical analysis of collections of items from InterMine endpoints}, journal = {F1000Research}, volume = {3}, pages = {45}, year = {2014}, url = {https://doi.org/10.12688/f1000research.3-45.v1}, doi = {10.12688/F1000RESEARCH.3-45.V1}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/f1000research/KalderimisSSLLM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/f1000research/KalderimisSSLLM14a, author = {Alex Kalderimis and Radek Stepan and Julie M. Sullivan and Rachel Lyne and Michael Lyne and Gos Micklem}, title = {\emph{BioJS InterMineTable Component}: {A} BioJS component for displaying data from InterMine compatible webservice endpoints}, journal = {F1000Research}, volume = {3}, pages = {46}, year = {2014}, url = {https://doi.org/10.12688/f1000research.3-46.v1}, doi = {10.12688/F1000RESEARCH.3-46.V1}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/f1000research/KalderimisSSLLM14a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/f1000research/KalderimisSSLLM14b, author = {Alex Kalderimis and Radek Stepan and Julie M. Sullivan and Rachel Lyne and Michael Lyne and Gos Micklem}, title = {\emph{BioJS DAGViewer}: {A} reusable JavaScript component for displaying directed graphs}, journal = {F1000Research}, volume = {3}, pages = {51}, year = {2014}, url = {https://doi.org/10.12688/f1000research.3-51.v1}, doi = {10.12688/F1000RESEARCH.3-51.V1}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/f1000research/KalderimisSSLLM14b.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/BalakrishnanPKHBHSMC12, author = {Rama Balakrishnan and Julie Park and Kalpana Karra and Benjamin C. Hitz and Gail Binkley and Eurie L. Hong and Julie M. Sullivan and Gos Micklem and J. Michael Cherry}, title = {YeastMine - an integrated data warehouse for \emph{Saccharomyces cerevisiae} data as a multipurpose tool-kit}, journal = {Database J. Biol. Databases Curation}, volume = {2012}, year = {2012}, url = {https://doi.org/10.1093/database/bar062}, doi = {10.1093/DATABASE/BAR062}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/BalakrishnanPKHBHSMC12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SmithABCCHLLKRSSWWM12, author = {Richard N. Smith and Jelena Aleksic and Daniela Butano and Adrian Carr and Sergio Contrino and Fengyuan Hu and Mike Lyne and Rachel Lyne and Alex Kalderimis and Kim Rutherford and Radek Stepan and Julie M. Sullivan and Matthew Wakeling and Xavier Watkins and Gos Micklem}, title = {InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data}, journal = {Bioinform.}, volume = {28}, number = {23}, pages = {3163--3165}, year = {2012}, url = {https://doi.org/10.1093/bioinformatics/bts577}, doi = {10.1093/BIOINFORMATICS/BTS577}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/SmithABCCHLLKRSSWWM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ContrinoSBCHLRKSCKLSWPRZLSM12, author = {Sergio Contrino and Richard N. Smith and Daniela Butano and Adrian Carr and Fengyuan Hu and Rachel Lyne and Kim Rutherford and Alex Kalderimis and Julie M. Sullivan and Seth Carbon and Ellen T. Kephart and Paul Lloyd and E. O. Stinson and Nicole L. Washington and Marc D. Perry and Peter Ruzanov and Zheng Zha and Suzanna E. Lewis and Lincoln D. Stein and Gos Micklem}, title = {modMine: flexible access to modENCODE data}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {1082--1088}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr921}, doi = {10.1093/NAR/GKR921}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ContrinoSBCHLRKSCKLSWPRZLSM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/McPikeSGD02, author = {Mark P. McPike and Julie M. Sullivan and Jerry Goodisman and James C. Dabrowiak}, title = {Footprinting, circular dichroism and {UV} melting studies on neomycin {B} binding to the packaging region of human immunodeficiency virus type-1 {RNA}}, journal = {Nucleic Acids Res.}, volume = {30}, number = {13}, pages = {2825--2831}, year = {2002}, url = {https://doi.org/10.1093/nar/gkf402}, doi = {10.1093/NAR/GKF402}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/McPikeSGD02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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