BibTeX records: Zohar Yakhini

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@article{DBLP:journals/popets/AkaviaGSWY24,
  author       = {Adi Akavia and
                  Ben Galili and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  title        = {Privacy Preserving Feature Selection for Sparse Linear Regression},
  journal      = {Proc. Priv. Enhancing Technol.},
  volume       = {2024},
  number       = {1},
  pages        = {300--313},
  year         = {2024},
  url          = {https://doi.org/10.56553/popets-2024-0017},
  doi          = {10.56553/POPETS-2024-0017},
  timestamp    = {Wed, 29 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/popets/AkaviaGSWY24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcom/ShafirSAYY24,
  author       = {Roy Shafir and
                  Omer Sabary and
                  Leon Anavy and
                  Eitan Yaakobi and
                  Zohar Yakhini},
  title        = {Sequence Design and Reconstruction Under the Repeat Channel in Enzymatic
                  {DNA} Synthesis},
  journal      = {{IEEE} Trans. Commun.},
  volume       = {72},
  number       = {2},
  pages        = {675--691},
  year         = {2024},
  url          = {https://doi.org/10.1109/TCOMM.2023.3330848},
  doi          = {10.1109/TCOMM.2023.3330848},
  timestamp    = {Sat, 16 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcom/ShafirSAYY24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2401-15666,
  author       = {Omer Sabary and
                  Inbal Preuss and
                  Ryan Gabrys and
                  Zohar Yakhini and
                  Leon Anavy and
                  Eitan Yaakobi},
  title        = {Error-Correcting Codes for Combinatorial {DNA} Composite},
  journal      = {CoRR},
  volume       = {abs/2401.15666},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2401.15666},
  doi          = {10.48550/ARXIV.2401.15666},
  eprinttype    = {arXiv},
  eprint       = {2401.15666},
  timestamp    = {Tue, 06 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2401-15666.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-07639,
  author       = {Nir Weingarten and
                  Zohar Yakhini and
                  Moshe Butman and
                  Ran Gilad{-}Bachrach},
  title        = {Tighter Bounds on the Information Bottleneck with Application to Deep
                  Learning},
  journal      = {CoRR},
  volume       = {abs/2402.07639},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.07639},
  doi          = {10.48550/ARXIV.2402.07639},
  eprinttype    = {arXiv},
  eprint       = {2402.07639},
  timestamp    = {Mon, 19 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-07639.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csfw/AkaviaGSWY23,
  author       = {Adi Akavia and
                  Ben Galili and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  title        = {Efficient Privacy-Preserving Viral Strain Classification via k-mer
                  Signatures and {FHE}},
  booktitle    = {36th {IEEE} Computer Security Foundations Symposium, {CSF} 2023, Dubrovnik,
                  Croatia, July 10-14, 2023},
  pages        = {489--504},
  publisher    = {{IEEE}},
  year         = {2023},
  url          = {https://doi.org/10.1109/CSF57540.2023.00012},
  doi          = {10.1109/CSF57540.2023.00012},
  timestamp    = {Tue, 05 Sep 2023 20:33:27 +0200},
  biburl       = {https://dblp.org/rec/conf/csfw/AkaviaGSWY23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iacr/AkaviaGSWY23,
  author       = {Adi Akavia and
                  Ben Galili and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  title        = {Efficient Privacy-Preserving Viral Strain Classification via k-mer
                  Signatures and {FHE}},
  journal      = {{IACR} Cryptol. ePrint Arch.},
  pages        = {9},
  year         = {2023},
  url          = {https://eprint.iacr.org/2023/009},
  timestamp    = {Mon, 30 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/iacr/AkaviaGSWY23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iacr/AkaviaGSWY23a,
  author       = {Adi Akavia and
                  Ben Galili and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  title        = {Privacy Preserving Feature Selection for Sparse Linear Regression},
  journal      = {{IACR} Cryptol. ePrint Arch.},
  pages        = {1354},
  year         = {2023},
  url          = {https://eprint.iacr.org/2023/1354},
  timestamp    = {Sat, 07 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/iacr/AkaviaGSWY23a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sensors/BenmussaCY22,
  author       = {Chlo{\'{e}} Benmussa and
                  Jessica R. Cauchard and
                  Zohar Yakhini},
  title        = {Generating Alerts from Breathing Pattern Outliers},
  journal      = {Sensors},
  volume       = {22},
  number       = {16},
  pages        = {6306},
  year         = {2022},
  url          = {https://doi.org/10.3390/s22166306},
  doi          = {10.3390/S22166306},
  timestamp    = {Tue, 06 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/sensors/BenmussaCY22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SabaryOSAYY21,
  author       = {Omer Sabary and
                  Yoav Orlev and
                  Roy Shafir and
                  Leon Anavy and
                  Eitan Yaakobi and
                  Zohar Yakhini},
  title        = {{SOLQC:} Synthetic Oligo Library Quality Control tool},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {5},
  pages        = {720--722},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btaa740},
  doi          = {10.1093/BIOINFORMATICS/BTAA740},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SabaryOSAYY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Levy-JurgensonT21,
  author       = {Alona Levy{-}Jurgenson and
                  Xavier Tekpli and
                  Zohar Yakhini},
  title        = {Assessing heterogeneity in spatial data using the {HTA} index with
                  applications to spatial transcriptomics and imaging},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {21},
  pages        = {3796--3804},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btab569},
  doi          = {10.1093/BIOINFORMATICS/BTAB569},
  timestamp    = {Tue, 12 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/Levy-JurgensonT21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LevyJurgensonTY21,
  author       = {Alona Levy{-}Jurgenson and
                  Xavier Tekpli and
                  Zohar Yakhini},
  title        = {Erratum to: Assessing heterogeneity in spatial data using the {HTA}
                  index with applications to spatial transcriptomics and imaging},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {22},
  pages        = {4296},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btab692},
  doi          = {10.1093/BIOINFORMATICS/BTAB692},
  timestamp    = {Tue, 12 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LevyJurgensonTY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaliliSY21a,
  author       = {Ben Galili and
                  Anat Samohi and
                  Zohar Yakhini},
  title        = {On the stability of log-rank test under labeling errors},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {22},
  pages        = {4297},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btab693},
  doi          = {10.1093/BIOINFORMATICS/BTAB693},
  timestamp    = {Tue, 12 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GaliliSY21a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaliliSY21,
  author       = {Ben Galili and
                  Anat Samohi and
                  Zohar Yakhini},
  title        = {On the stability of log-rank test under labeling errors},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {23},
  pages        = {4451--4459},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btab495},
  doi          = {10.1093/BIOINFORMATICS/BTAB495},
  timestamp    = {Tue, 12 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GaliliSY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/Ben-ElazarAJLKJ21,
  author       = {Shay Ben{-}Elazar and
                  Miriam Ragle Aure and
                  Kristin Jonsdottir and
                  Suvi{-}Katri Leivonen and
                  Vessela N. Kristensen and
                  Emiel A. M. Janssen and
                  Kristine Kleivi Sahlberg and
                  Ole Christian Lingj{\ae}rde and
                  Zohar Yakhini},
  title        = {miRNA normalization enables joint analysis of several datasets to
                  increase sensitivity and to reveal novel miRNAs differentially expressed
                  in breast cancer},
  journal      = {PLoS Comput. Biol.},
  volume       = {17},
  number       = {2},
  year         = {2021},
  url          = {https://doi.org/10.1371/journal.pcbi.1008608},
  doi          = {10.1371/JOURNAL.PCBI.1008608},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/Ben-ElazarAJLKJ21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/OringYH21,
  author       = {Alon Oring and
                  Zohar Yakhini and
                  Yacov Hel{-}Or},
  editor       = {Marina Meila and
                  Tong Zhang},
  title        = {Autoencoder Image Interpolation by Shaping the Latent Space},
  booktitle    = {Proceedings of the 38th International Conference on Machine Learning,
                  {ICML} 2021, 18-24 July 2021, Virtual Event},
  series       = {Proceedings of Machine Learning Research},
  volume       = {139},
  pages        = {8281--8290},
  publisher    = {{PMLR}},
  year         = {2021},
  url          = {http://proceedings.mlr.press/v139/oring21a.html},
  timestamp    = {Wed, 25 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icml/OringYH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/itw/ShafirSAYY21,
  author       = {Roy Shafir and
                  Omer Sabary and
                  Leon Anavy and
                  Eitan Yaakobi and
                  Zohar Yakhini},
  title        = {Sequence Reconstruction Under Stutter Noise in Enzymatic {DNA} Synthesis},
  booktitle    = {{IEEE} Information Theory Workshop, {ITW} 2021, Kanazawa, Japan, October
                  17-21, 2021},
  pages        = {1--6},
  publisher    = {{IEEE}},
  year         = {2021},
  url          = {https://doi.org/10.1109/ITW48936.2021.9611362},
  doi          = {10.1109/ITW48936.2021.9611362},
  timestamp    = {Tue, 30 Nov 2021 17:31:25 +0100},
  biburl       = {https://dblp.org/rec/conf/itw/ShafirSAYY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/noms/Bremler-BarrLY20,
  author       = {Anat Bremler{-}Barr and
                  Haim Levy and
                  Zohar Yakhini},
  title        = {IoT or NoT: Identifying IoT Devices in a Short Time Scale},
  booktitle    = {{NOMS} 2020 - {IEEE/IFIP} Network Operations and Management Symposium,
                  Budapest, Hungary, April 20-24, 2020},
  pages        = {1--9},
  publisher    = {{IEEE}},
  year         = {2020},
  url          = {https://doi.org/10.1109/NOMS47738.2020.9110451},
  doi          = {10.1109/NOMS47738.2020.9110451},
  timestamp    = {Mon, 15 Jun 2020 11:49:54 +0200},
  biburl       = {https://dblp.org/rec/conf/noms/Bremler-BarrLY20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-01487,
  author       = {Alon Oring and
                  Zohar Yakhini and
                  Yacov Hel{-}Or},
  title        = {Faithful Autoencoder Interpolation by Shaping the Latent Space},
  journal      = {CoRR},
  volume       = {abs/2008.01487},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.01487},
  eprinttype    = {arXiv},
  eprint       = {2008.01487},
  timestamp    = {Fri, 07 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-01487.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/Levy-JurgensonT19,
  author       = {Alona Levy{-}Jurgenson and
                  Xavier Tekpli and
                  Vessela N. Kristensen and
                  Zohar Yakhini},
  editor       = {Ian H. Holmes and
                  Carlos Mart{\'{\i}}n{-}Vide and
                  Miguel A. Vega{-}Rodr{\'{\i}}guez},
  title        = {Predicting Methylation from Sequence and Gene Expression Using Deep
                  Learning with Attention},
  booktitle    = {Algorithms for Computational Biology - 6th International Conference,
                  AlCoB 2019, Berkeley, CA, USA, May 28-30, 2019, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11488},
  pages        = {179--190},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-18174-1\_13},
  doi          = {10.1007/978-3-030-18174-1\_13},
  timestamp    = {Tue, 09 Nov 2021 09:18:33 +0100},
  biburl       = {https://dblp.org/rec/conf/alcob/Levy-JurgensonT19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccs/AkaviaSWY19,
  author       = {Adi Akavia and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  editor       = {Michael Brenner and
                  Tancr{\`{e}}de Lepoint and
                  Kurt Rohloff},
  title        = {Linear-Regression on Packed Encrypted Data in the Two-Server Model},
  booktitle    = {Proceedings of the 7th {ACM} Workshop on Encrypted Computing {\&}
                  Applied Homomorphic Cryptography, WAHC@CCS 2019, London, UK, November
                  11-15, 2019},
  pages        = {21--32},
  publisher    = {{ACM}},
  year         = {2019},
  url          = {https://doi.org/10.1145/3338469.3358942},
  doi          = {10.1145/3338469.3358942},
  timestamp    = {Tue, 10 Nov 2020 16:06:16 +0100},
  biburl       = {https://dblp.org/rec/conf/ccs/AkaviaSWY19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1910-05647,
  author       = {Anat Bremler{-}Barr and
                  Haim Levy and
                  Zohar Yakhini},
  title        = {IoT or NoT: Identifying IoT Devices in a ShortTime Scale},
  journal      = {CoRR},
  volume       = {abs/1910.05647},
  year         = {2019},
  url          = {http://arxiv.org/abs/1910.05647},
  eprinttype    = {arXiv},
  eprint       = {1910.05647},
  timestamp    = {Wed, 16 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1910-05647.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iacr/AkaviaSWY19,
  author       = {Adi Akavia and
                  Hayim Shaul and
                  Mor Weiss and
                  Zohar Yakhini},
  title        = {Linear-Regression on Packed Encrypted Data in the Two-Server Model},
  journal      = {{IACR} Cryptol. ePrint Arch.},
  pages        = {1238},
  year         = {2019},
  url          = {https://eprint.iacr.org/2019/1238},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/iacr/AkaviaSWY19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PolishchukPYM18,
  author       = {Maya Polishchuk and
                  Inbal Paz and
                  Zohar Yakhini and
                  Yael Mandel{-}Gutfreund},
  title        = {{SMARTIV:} combined sequence and structure de-novo motif discovery
                  for in-vivo {RNA} binding data},
  journal      = {Nucleic Acids Res.},
  volume       = {46},
  number       = {Webserver-Issue},
  pages        = {W221--W228},
  year         = {2018},
  url          = {https://doi.org/10.1093/nar/gky453},
  doi          = {10.1093/NAR/GKY453},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/PolishchukPYM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Cohn-Alperovich17,
  author       = {Dalia Cohn{-}Alperovich and
                  Alona Rabner and
                  Ilona Kifer and
                  Yael Mandel{-}Gutfreund and
                  Zohar Yakhini},
  title        = {Mutual enrichment in aggregated ranked lists with applications to
                  gene expression regulation},
  journal      = {Bioinform.},
  volume       = {33},
  number       = {3},
  pages        = {470},
  year         = {2017},
  url          = {https://doi.org/10.1093/bioinformatics/btw727},
  doi          = {10.1093/BIOINFORMATICS/BTW727},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/Cohn-Alperovich17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KiferBBZXLY17,
  author       = {Ilona Kifer and
                  Rui Mamede Branca and
                  Amir Ben{-}Dor and
                  Linhui Zhai and
                  Ping Xu and
                  Janne Lehti{\"{o}} and
                  Zohar Yakhini},
  title        = {Optimizing Analytical Depth and Cost Efficiency of {IEF-LC/MS} Proteomics},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {14},
  number       = {2},
  pages        = {272--281},
  year         = {2017},
  url          = {https://doi.org/10.1109/TCBB.2015.2452901},
  doi          = {10.1109/TCBB.2015.2452901},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/KiferBBZXLY17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Cohn-Alperovich16,
  author       = {Dalia Cohn{-}Alperovich and
                  Alona Rabner and
                  Ilona Kifer and
                  Yael Mandel{-}Gutfreund and
                  Zohar Yakhini},
  title        = {Mutual enrichment in aggregated ranked lists with applications to
                  gene expression regulation},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {17},
  pages        = {464--472},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw435},
  doi          = {10.1093/BIOINFORMATICS/BTW435},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/Cohn-Alperovich16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Ben-ElazarCY16,
  author       = {Shay Ben{-}Elazar and
                  Benny Chor and
                  Zohar Yakhini},
  title        = {Extending partial haplotypes to full genome haplotypes using chromosome
                  conformation capture data},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {17},
  pages        = {559--566},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw453},
  doi          = {10.1093/BIOINFORMATICS/BTW453},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/Ben-ElazarCY16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SteinfeldNCYT15,
  author       = {Israel Steinfeld and
                  Roy Navon and
                  Michael L. Creech and
                  Zohar Yakhini and
                  Anya Tsalenko},
  title        = {ENViz: a Cytoscape App for integrated statistical analysis and visualization
                  of sample-matched data with multiple data types},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {10},
  pages        = {1683--1685},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu853},
  doi          = {10.1093/BIOINFORMATICS/BTU853},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SteinfeldNCYT15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RetwitzerPCKYB15,
  author       = {Matan Drory Retwitzer and
                  Maya Polishchuk and
                  Elena Churkin and
                  Ilona Kifer and
                  Zohar Yakhini and
                  Danny Barash},
  title        = {RNAPattMatch: a web server for {RNA} sequence/structure motif detection
                  based on pattern matching with flexible gaps},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Webserver-Issue},
  pages        = {W507--W512},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gkv435},
  doi          = {10.1093/NAR/GKV435},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/RetwitzerPCKYB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/LeibovichY14,
  author       = {Limor Leibovich and
                  Zohar Yakhini},
  title        = {Mutual enrichment in ranked lists and the statistical assessment of
                  position weight matrix motifs},
  journal      = {Algorithms Mol. Biol.},
  volume       = {9},
  pages        = {11},
  year         = {2014},
  url          = {https://doi.org/10.1186/1748-7188-9-11},
  doi          = {10.1186/1748-7188-9-11},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/almob/LeibovichY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/KiferBYBLX14,
  author       = {Ilona Kifer and
                  Amir Ben{-}Dor and
                  Zohar Yakhini and
                  Rui Mamede Branca and
                  Janne Lehti{\"{o}} and
                  Ping Xu},
  editor       = {Huiru Jane Zheng and
                  Werner Dubitzky and
                  Xiaohua Hu and
                  Jin{-}Kao Hao and
                  Daniel P. Berrar and
                  Kwang{-}Hyun Cho and
                  Yadong Wang and
                  David R. Gilbert},
  title        = {Optimizing analytical depth and cost efficiency of {IEF-LC/MS} proteomics},
  booktitle    = {2014 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2014, Belfast, United Kingdom, November 2-5, 2014},
  pages        = {99--106},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/BIBM.2014.6999136},
  doi          = {10.1109/BIBM.2014.6999136},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/KiferBYBLX14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LeibovichPYM13,
  author       = {Limor Leibovich and
                  Inbal Paz and
                  Zohar Yakhini and
                  Yael Mandel{-}Gutfreund},
  title        = {DRIMust: a web server for discovering rank imbalanced motifs using
                  suffix trees},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Webserver-Issue},
  pages        = {174--179},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gkt407},
  doi          = {10.1093/NAR/GKT407},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LeibovichPYM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/LeibovichY13,
  author       = {Limor Leibovich and
                  Zohar Yakhini},
  editor       = {Aaron E. Darling and
                  Jens Stoye},
  title        = {Mutual Enrichment in Ranked Lists and the Statistical Assessment of
                  Position Weight Matrix Motifs},
  booktitle    = {Algorithms in Bioinformatics - 13th International Workshop, {WABI}
                  2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8126},
  pages        = {273--286},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-642-40453-5\_21},
  doi          = {10.1007/978-3-642-40453-5\_21},
  timestamp    = {Tue, 21 Mar 2023 21:00:29 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/LeibovichY13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1302-3579,
  author       = {Nir Friedman and
                  Zohar Yakhini},
  title        = {On the Sample Complexity of Learning Bayesian Networks},
  journal      = {CoRR},
  volume       = {abs/1302.3579},
  year         = {2013},
  url          = {http://arxiv.org/abs/1302.3579},
  eprinttype    = {arXiv},
  eprint       = {1302.3579},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1302-3579.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/talg/AumannLMPY12,
  author       = {Yonatan Aumann and
                  Moshe Lewenstein and
                  Oren Melamud and
                  Ron Y. Pinter and
                  Zohar Yakhini},
  title        = {Dotted interval graphs},
  journal      = {{ACM} Trans. Algorithms},
  volume       = {8},
  number       = {2},
  pages        = {9:1--9:21},
  year         = {2012},
  url          = {https://doi.org/10.1145/2151171.2151172},
  doi          = {10.1145/2151171.2151172},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/talg/AumannLMPY12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1212-2488,
  author       = {Ari Frank and
                  Dan Geiger and
                  Zohar Yakhini},
  title        = {A Distance-Based Branch and Bound Feature Selection Algorithm},
  journal      = {CoRR},
  volume       = {abs/1212.2488},
  year         = {2012},
  url          = {http://arxiv.org/abs/1212.2488},
  eprinttype    = {arXiv},
  eprint       = {1212.2488},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1212-2488.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YakhiniJ11,
  author       = {Zohar Yakhini and
                  Igor Jurisica},
  title        = {Cancer Computational Biology},
  journal      = {{BMC} Bioinform.},
  volume       = {12},
  pages        = {120},
  year         = {2011},
  url          = {https://doi.org/10.1186/1471-2105-12-120},
  doi          = {10.1186/1471-2105-12-120},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/YakhiniJ11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EdenNSLY09,
  author       = {Eran Eden and
                  Roy Navon and
                  Israel Steinfeld and
                  Doron Lipson and
                  Zohar Yakhini},
  title        = {\emph{GOrilla}: a tool for discovery and visualization of enriched
                  {GO} terms in ranked gene lists},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-48},
  doi          = {10.1186/1471-2105-10-48},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/EdenNSLY09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/SteinfeldNAZY08,
  author       = {Israel Steinfeld and
                  Roy Navon and
                  Diego Ardig{\`{o}} and
                  Ivana Zavaroni and
                  Zohar Yakhini},
  title        = {Clinically driven semi-supervised class discovery in gene expression
                  data},
  booktitle    = {ECCB'08 Proceedings, Seventh European Conference on Computational
                  Biology, 22-26 September 2008, Cagliari, Italy},
  pages        = {90--97},
  year         = {2008},
  url          = {https://doi.org/10.1093/bioinformatics/btn279},
  doi          = {10.1093/BIOINFORMATICS/BTN279},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eccb/SteinfeldNAZY08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LipsonYA07,
  author       = {Doron Lipson and
                  Zohar Yakhini and
                  Yonatan Aumann},
  title        = {Optimization of probe coverage for high-resolution oligonucleotide
                  aCGH},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {2},
  pages        = {77--83},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btl316},
  doi          = {10.1093/BIOINFORMATICS/BTL316},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LipsonYA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YosefYTKBRS07,
  author       = {Nir Yosef and
                  Zohar Yakhini and
                  Anya Tsalenko and
                  Vessela N. Kristensen and
                  Anne{-}Lise B{\o}rresen{-}Dale and
                  Eytan Ruppin and
                  Roded Sharan},
  title        = {A supervised approach for identifying discriminating genotype patterns
                  and its application to breast cancer data},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {2},
  pages        = {91--98},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btl298},
  doi          = {10.1093/BIOINFORMATICS/BTL298},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/YosefYTKBRS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RokhlenkoWY07,
  author       = {Oleg Rokhlenko and
                  Ydo Wexler and
                  Zohar Yakhini},
  title        = {Similarities and differences of gene expression in yeast stress conditions},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {2},
  pages        = {184--190},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btl308},
  doi          = {10.1093/BIOINFORMATICS/BTL308},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/RokhlenkoWY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SteinfeldNAZY07,
  author       = {Israel Steinfeld and
                  Roy Navon and
                  Diego Ardig{\`{o}} and
                  Ivana Zavaroni and
                  Zohar Yakhini},
  title        = {Semi-supervised class discovery using quantitative phenotypes - {CVD}
                  as a case study},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  number       = {{S-8}},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-S8-S6},
  doi          = {10.1186/1471-2105-8-S8-S6},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SteinfeldNAZY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/EdenLYY07,
  author       = {Eran Eden and
                  Doron Lipson and
                  Sivan Yogev and
                  Zohar Yakhini},
  title        = {Discovering Motifs in Ranked Lists of {DNA} Sequences},
  journal      = {PLoS Comput. Biol.},
  volume       = {3},
  number       = {3},
  year         = {2007},
  url          = {https://doi.org/10.1371/journal.pcbi.0030039},
  doi          = {10.1371/JOURNAL.PCBI.0030039},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/EdenLYY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorLTRBBWBY07,
  author       = {Amir Ben{-}Dor and
                  Doron Lipson and
                  Anya Tsalenko and
                  Mark Reimers and
                  Lars O. Baumbusch and
                  Michael T. Barrett and
                  John N. Weinstein and
                  Anne{-}Lise B{\o}rresen{-}Dale and
                  Zohar Yakhini},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Framework for Identifying Common Aberrations in {DNA} Copy Number
                  Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {122--136},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_9},
  doi          = {10.1007/978-3-540-71681-5\_9},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorLTRBBWBY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/TsalenkoSKEBBY06,
  author       = {Anya Tsalenko and
                  Roded Sharan and
                  Vessela N. Kristensen and
                  Hege Edvardsen and
                  Anne{-}Lise B{\o}rresen{-}Dale and
                  Amir Ben{-}Dor and
                  Zohar Yakhini},
  title        = {Analysis of Snp-expression Association Matrices},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {4},
  number       = {2},
  pages        = {259--274},
  year         = {2006},
  url          = {https://doi.org/10.1142/S0219720006001953},
  doi          = {10.1142/S0219720006001953},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/TsalenkoSKEBBY06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LipsonABLY06,
  author       = {Doron Lipson and
                  Yonatan Aumann and
                  Amir Ben{-}Dor and
                  Nathan Linial and
                  Zohar Yakhini},
  title        = {Efficient Calculation of Interval Scores for {DNA} Copy Number Data
                  Analysis},
  journal      = {J. Comput. Biol.},
  volume       = {13},
  number       = {2},
  pages        = {215--228},
  year         = {2006},
  url          = {https://doi.org/10.1089/cmb.2006.13.215},
  doi          = {10.1089/CMB.2006.13.215},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/LipsonABLY06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZilbersteinZPY06,
  author       = {Chaya Ben{-}Zaken Zilberstein and
                  Michal Ziv{-}Ukelson and
                  Ron Y. Pinter and
                  Zohar Yakhini},
  title        = {A High-Throughput Approach for Associating MicroRNAs with Their Activity
                  Conditions},
  journal      = {J. Comput. Biol.},
  volume       = {13},
  number       = {2},
  pages        = {245--266},
  year         = {2006},
  url          = {https://doi.org/10.1089/cmb.2006.13.245},
  doi          = {10.1089/CMB.2006.13.245},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/ZilbersteinZPY06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ivs/KincaidBY05,
  author       = {Robert Kincaid and
                  Amir Ben{-}Dor and
                  Zohar Yakhini},
  title        = {Exploratory visualization of array-based comparative genomic hybridization},
  journal      = {Inf. Vis.},
  volume       = {4},
  number       = {3},
  pages        = {176--190},
  year         = {2005},
  url          = {https://doi.org/10.1057/palgrave.ivs.9500095},
  doi          = {10.1057/PALGRAVE.IVS.9500095},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ivs/KincaidBY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SharanGYB05,
  author       = {Roded Sharan and
                  Jens Gramm and
                  Zohar Yakhini and
                  Amir Ben{-}Dor},
  title        = {Multiplexing Schemes for Generic {SNP} Genotyping Assays},
  journal      = {J. Comput. Biol.},
  volume       = {12},
  number       = {5},
  pages        = {514--533},
  year         = {2005},
  url          = {https://doi.org/10.1089/cmb.2005.12.514},
  doi          = {10.1089/CMB.2005.12.514},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/SharanGYB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WexlerYKG05,
  author       = {Ydo Wexler and
                  Zohar Yakhini and
                  Yechezkel Kashi and
                  Dan Geiger},
  title        = {Finding Approximate Tandem Repeats in Genomic Sequences},
  journal      = {J. Comput. Biol.},
  volume       = {12},
  number       = {7},
  pages        = {928--942},
  year         = {2005},
  url          = {https://doi.org/10.1089/cmb.2005.12.928},
  doi          = {10.1089/CMB.2005.12.928},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/WexlerYKG05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/AumannMY05,
  author       = {Yonatan Aumann and
                  Efrat Manisterski and
                  Zohar Yakhini},
  title        = {Designing optimally multiplexed {SNP} genotyping assays},
  journal      = {J. Comput. Syst. Sci.},
  volume       = {70},
  number       = {3},
  pages        = {399--417},
  year         = {2005},
  url          = {https://doi.org/10.1016/j.jcss.2004.12.004},
  doi          = {10.1016/J.JCSS.2004.12.004},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcss/AumannMY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/TsalenkoSEKBBY05,
  author       = {Anya Tsalenko and
                  Roded Sharan and
                  Hege Edvardsen and
                  Vessela N. Kristensen and
                  Anne{-}Lise B{\o}rresen{-}Dale and
                  Amir Ben{-}Dor and
                  Zohar Yakhini},
  title        = {Analysis of SNP-Expression Association Matrices},
  booktitle    = {Fourth International {IEEE} Computer Society Computational Systems
                  Bioinformatics Conference, {CSB} 2005, Stanford, CA, USA, August 8-11,
                  2005},
  pages        = {135--143},
  publisher    = {{IEEE} Computer Society},
  year         = {2005},
  url          = {https://doi.org/10.1109/CSB.2005.14},
  doi          = {10.1109/CSB.2005.14},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/TsalenkoSEKBBY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LipsonABLY05,
  author       = {Doron Lipson and
                  Yonatan Aumann and
                  Amir Ben{-}Dor and
                  Nathan Linial and
                  Zohar Yakhini},
  editor       = {Satoru Miyano and
                  Jill P. Mesirov and
                  Simon Kasif and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Efficient Calculation of Interval Scores for {DNA} Copy Number Data
                  Analysis},
  booktitle    = {Research in Computational Molecular Biology, 9th Annual International
                  Conference, {RECOMB} 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3500},
  pages        = {83--100},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11415770\_6},
  doi          = {10.1007/11415770\_6},
  timestamp    = {Mon, 13 May 2019 09:30:09 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/LipsonABLY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZilbersteinZPY05,
  author       = {Chaya Ben{-}Zaken Zilberstein and
                  Michal Ziv{-}Ukelson and
                  Ron Y. Pinter and
                  Zohar Yakhini},
  editor       = {Satoru Miyano and
                  Jill P. Mesirov and
                  Simon Kasif and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {A High-Throughput Approach for Associating microRNAs with Their Activity
                  Conditions},
  booktitle    = {Research in Computational Molecular Biology, 9th Annual International
                  Conference, {RECOMB} 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3500},
  pages        = {133--151},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11415770\_11},
  doi          = {10.1007/11415770\_11},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ZilbersteinZPY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/AumannLMPY05,
  author       = {Yonatan Aumann and
                  Moshe Lewenstein and
                  Oren Melamud and
                  Ron Y. Pinter and
                  Zohar Yakhini},
  title        = {Dotted interval graphs and high throughput genotyping},
  booktitle    = {Proceedings of the Sixteenth Annual {ACM-SIAM} Symposium on Discrete
                  Algorithms, {SODA} 2005, Vancouver, British Columbia, Canada, January
                  23-25, 2005},
  pages        = {339--348},
  publisher    = {{SIAM}},
  year         = {2005},
  url          = {http://dl.acm.org/citation.cfm?id=1070432.1070480},
  timestamp    = {Fri, 07 Dec 2012 17:02:08 +0100},
  biburl       = {https://dblp.org/rec/conf/soda/AumannLMPY05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorHKSSY04,
  author       = {Amir Ben{-}Dor and
                  Tzvika Hartman and
                  Richard M. Karp and
                  Benno Schwikowski and
                  Roded Sharan and
                  Zohar Yakhini},
  title        = {Towards Optimally Multiplexed Applications of Universal Arrays},
  journal      = {J. Comput. Biol.},
  volume       = {11},
  number       = {2/3},
  pages        = {476--492},
  year         = {2004},
  url          = {https://doi.org/10.1089/1066527041410373},
  doi          = {10.1089/1066527041410373},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Ben-DorHKSSY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/SharanBY04,
  author       = {Roded Sharan and
                  Amir Ben{-}Dor and
                  Zohar Yakhini},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Tiffany A. Jung and
                  Teri E. Klein},
  title        = {Multiplexing Schemes for Generic {SNP} Genotyping Assays},
  booktitle    = {Biocomputing 2004, Proceedings of the Pacific Symposium, Hawaii, USA,
                  6-10 January 2004},
  pages        = {140--151},
  publisher    = {World Scientific},
  year         = {2004},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb04/sharan.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/SharanBY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZilbersteinEY04,
  author       = {Chaya Ben{-}Zaken Zilberstein and
                  Eleazar Eskin and
                  Zohar Yakhini},
  editor       = {Eleazar Eskin and
                  Christopher T. Workman},
  title        = {Using Expression Data to Discover {RNA} and {DNA} Regulatory Sequence
                  Motifs},
  booktitle    = {Regulatory Genomics, {RECOMB} 2004 International Workshop, {RRG} 2004,
                  San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {3318},
  pages        = {65--78},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-32280-1\_7},
  doi          = {10.1007/978-3-540-32280-1\_7},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ZilbersteinEY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/WexlerYKG04,
  author       = {Ydo Wexler and
                  Zohar Yakhini and
                  Yechezkel Kashi and
                  Dan Geiger},
  editor       = {Philip E. Bourne and
                  Dan Gusfield},
  title        = {Finding approximate tandem repeats in genomic sequences},
  booktitle    = {Proceedings of the Eighth Annual International Conference on Computational
                  Molecular Biology, 2004, San Diego, California, USA, March 27-31,
                  2004},
  pages        = {223--232},
  publisher    = {{ACM}},
  year         = {2004},
  url          = {https://doi.org/10.1145/974614.974644},
  doi          = {10.1145/974614.974644},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/WexlerYKG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/LipsonBDY04,
  author       = {Doron Lipson and
                  Amir Ben{-}Dor and
                  Elinor Dehan and
                  Zohar Yakhini},
  editor       = {Inge Jonassen and
                  Junhyong Kim},
  title        = {Joint Analysis of {DNA} Copy Numbers and Gene Expression Levels},
  booktitle    = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004,
                  Bergen, Norway, September 17-21, 2004, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3240},
  pages        = {135--146},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-30219-3\_12},
  doi          = {10.1007/978-3-540-30219-3\_12},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LipsonBDY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorCKY03,
  author       = {Amir Ben{-}Dor and
                  Benny Chor and
                  Richard M. Karp and
                  Zohar Yakhini},
  title        = {Discovering Local Structure in Gene Expression Data: The Order-Preserving
                  Submatrix Problem},
  journal      = {J. Comput. Biol.},
  volume       = {10},
  number       = {3/4},
  pages        = {373--384},
  year         = {2003},
  url          = {https://doi.org/10.1089/10665270360688075},
  doi          = {10.1089/10665270360688075},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Ben-DorCKY03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/TsalenkoBCY03,
  author       = {Anna Tsalenko and
                  Amir Ben{-}Dor and
                  Nancy Cox and
                  Zohar Yakhini},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Teri E. Klein},
  title        = {Methods for Analysis and Visualization of {SNP} Genotype Data for
                  Complex Diseases},
  booktitle    = {Proceedings of the 8th Pacific Symposium on Biocomputing, {PSB} 2003,
                  Lihue, Hawaii, USA, January 3-7, 2003},
  pages        = {548--561},
  year         = {2003},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb03/tsalenko.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/TsalenkoBCY03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorHSSY03,
  author       = {Amir Ben{-}Dor and
                  Tzvika Hartman and
                  Benno Schwikowski and
                  Roded Sharan and
                  Zohar Yakhini},
  editor       = {Martin Vingron and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman and
                  Webb Miller},
  title        = {Towards optimally multiplexed applications of universal {DNA} tag
                  systems},
  booktitle    = {Proceedings of the Sventh Annual International Conference on Computational
                  Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
  pages        = {48--56},
  publisher    = {{ACM}},
  year         = {2003},
  url          = {https://doi.org/10.1145/640075.640081},
  doi          = {10.1145/640075.640081},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorHSSY03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uai/FrankGY03,
  author       = {Ari Frank and
                  Dan Geiger and
                  Zohar Yakhini},
  editor       = {Christopher Meek and
                  Uffe Kj{\ae}rulff},
  title        = {A Distance-Based Branch and Bound Feature Selection Algorithm},
  booktitle    = {{UAI} '03, Proceedings of the 19th Conference in Uncertainty in Artificial
                  Intelligence, Acapulco, Mexico, August 7-10 2003},
  pages        = {241--248},
  publisher    = {Morgan Kaufmann},
  year         = {2003},
  url          = {https://dslpitt.org/uai/displayArticleDetails.jsp?mmnu=1\&\#38;smnu=2\&\#38;article\_id=935\&\#38;proceeding\_id=19},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/uai/FrankGY03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/AumannMY03,
  author       = {Yonatan Aumann and
                  Efrat Manisterski and
                  Zohar Yakhini},
  editor       = {Gary Benson and
                  Roderic D. M. Page},
  title        = {Designing Optimally Multiplexed {SNP} Genotyping Assays},
  booktitle    = {Algorithms in Bioinformatics, Third International Workshop, {WABI}
                  2003, Budapest, Hungary, September 15-20, 2003, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2812},
  pages        = {320--338},
  publisher    = {Springer},
  year         = {2003},
  url          = {https://doi.org/10.1007/978-3-540-39763-2\_24},
  doi          = {10.1007/978-3-540-39763-2\_24},
  timestamp    = {Tue, 14 May 2019 10:00:40 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/AumannMY03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorCKY02,
  author       = {Amir Ben{-}Dor and
                  Benny Chor and
                  Richard M. Karp and
                  Zohar Yakhini},
  editor       = {Gene Myers and
                  Sridhar Hannenhalli and
                  David Sankoff and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Discovering local structure in gene expression data: the order-preserving
                  submatrix problem},
  booktitle    = {Proceedings of the Sixth Annual International Conference on Computational
                  Biology, {RECOMB} 2002, Washington, DC, USA, April 18-21, 2002},
  pages        = {49--57},
  publisher    = {{ACM}},
  year         = {2002},
  url          = {https://doi.org/10.1145/565196.565203},
  doi          = {10.1145/565196.565203},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorCKY02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/LipsonWY02,
  author       = {Doron Lipson and
                  Peter Webb and
                  Zohar Yakhini},
  editor       = {Roderic Guig{\'{o}} and
                  Dan Gusfield},
  title        = {Designing Specific Oligonucleotide Probes for the Entire S. cerevisiae
                  Transcriptome},
  booktitle    = {Algorithms in Bioinformatics, Second International Workshop, {WABI}
                  2002, Rome, Italy, September 17-21, 2002, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2452},
  pages        = {491--505},
  publisher    = {Springer},
  year         = {2002},
  url          = {https://doi.org/10.1007/3-540-45784-4\_38},
  doi          = {10.1007/3-540-45784-4\_38},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LipsonWY02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorFY01,
  author       = {Amir Ben{-}Dor and
                  Nir Friedman and
                  Zohar Yakhini},
  editor       = {Thomas Lengauer},
  title        = {Class discovery in gene expression data},
  booktitle    = {Proceedings of the Fifth Annual International Conference on Computational
                  Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
                  April 22-25, 2001},
  pages        = {31--38},
  publisher    = {{ACM}},
  year         = {2001},
  url          = {https://doi.org/10.1145/369133.369167},
  doi          = {10.1145/369133.369167},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorFY01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorKSY00,
  author       = {Amir Ben{-}Dor and
                  Richard M. Karp and
                  Benno Schwikowski and
                  Zohar Yakhini},
  title        = {Universal {DNA} Tag Systems: {A} Combinatorial Design Scheme},
  journal      = {J. Comput. Biol.},
  volume       = {7},
  number       = {3-4},
  pages        = {503--519},
  year         = {2000},
  url          = {https://doi.org/10.1089/106652700750050916},
  doi          = {10.1089/106652700750050916},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Ben-DorKSY00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorBFNSY00,
  author       = {Amir Ben{-}Dor and
                  Laurakay Bruhn and
                  Nir Friedman and
                  Iftach Nachman and
                  Mich{\`{e}}l Schummer and
                  Zohar Yakhini},
  title        = {Tissue Classification with Gene Expression Profiles},
  journal      = {J. Comput. Biol.},
  volume       = {7},
  number       = {3-4},
  pages        = {559--583},
  year         = {2000},
  url          = {https://doi.org/10.1089/106652700750050943},
  doi          = {10.1089/106652700750050943},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Ben-DorBFNSY00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorBFNSY00,
  author       = {Amir Ben{-}Dor and
                  Laurakay Bruhn and
                  Nir Friedman and
                  Iftach Nachman and
                  Mich{\`{e}}l Schummer and
                  Zohar Yakhini},
  editor       = {Ron Shamir and
                  Satoru Miyano and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Tissue classification with gene expression profiles},
  booktitle    = {Proceedings of the Fourth Annual International Conference on Computational
                  Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
  pages        = {54--64},
  publisher    = {{ACM}},
  year         = {2000},
  url          = {https://doi.org/10.1145/332306.332328},
  doi          = {10.1145/332306.332328},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorBFNSY00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorKSY00,
  author       = {Amir Ben{-}Dor and
                  Richard M. Karp and
                  Benno Schwikowski and
                  Zohar Yakhini},
  editor       = {Ron Shamir and
                  Satoru Miyano and
                  Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Universal {DNA} tag systems: a combinatorial design scheme},
  booktitle    = {Proceedings of the Fourth Annual International Conference on Computational
                  Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
  pages        = {65--75},
  publisher    = {{ACM}},
  year         = {2000},
  url          = {https://doi.org/10.1145/332306.332346},
  doi          = {10.1145/332306.332346},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorKSY00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorSY99,
  author       = {Amir Ben{-}Dor and
                  Ron Shamir and
                  Zohar Yakhini},
  title        = {Clustering Gene Expression Patterns},
  journal      = {J. Comput. Biol.},
  volume       = {6},
  number       = {3/4},
  pages        = {281--297},
  year         = {1999},
  url          = {https://doi.org/10.1089/106652799318274},
  doi          = {10.1089/106652799318274},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Ben-DorSY99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Ben-DorY99,
  author       = {Amir Ben{-}Dor and
                  Zohar Yakhini},
  editor       = {Sorin Istrail and
                  Pavel A. Pevzner and
                  Michael S. Waterman},
  title        = {Clustering gene expression patterns},
  booktitle    = {Proceedings of the Third Annual International Conference on Research
                  in Computational Molecular Biology, {RECOMB} 1999, Lyon, France, April
                  11-14, 1999},
  pages        = {33--42},
  publisher    = {{ACM}},
  year         = {1999},
  url          = {https://doi.org/10.1145/299432.299448},
  doi          = {10.1145/299432.299448},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorY99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uai/FriedmanY96,
  author       = {Nir Friedman and
                  Zohar Yakhini},
  editor       = {Eric Horvitz and
                  Finn Verner Jensen},
  title        = {On the Sample Complexity of Learning Bayesian Networks},
  booktitle    = {{UAI} '96: Proceedings of the Twelfth Annual Conference on Uncertainty
                  in Artificial Intelligence, Reed College, Portland, Oregon, USA, August
                  1-4, 1996},
  pages        = {274--282},
  publisher    = {Morgan Kaufmann},
  year         = {1996},
  url          = {https://dslpitt.org/uai/displayArticleDetails.jsp?mmnu=1\&\#38;smnu=2\&\#38;article\_id=377\&\#38;proceeding\_id=12},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/uai/FriedmanY96.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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