BibTeX records: Dachuan Zhang

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@article{DBLP:journals/bmcbi/CaiLZXHLGH23,
  author       = {Pengli Cai and
                  Sheng Liu and
                  Dachuan Zhang and
                  Huadong Xing and
                  Mengying Han and
                  Dongliang Liu and
                  Linlin Gong and
                  Qian{-}Nan Hu},
  title        = {SynBioTools: a one-stop facility for searching and selecting synthetic
                  biology tools},
  journal      = {{BMC} Bioinform.},
  volume       = {24},
  number       = {1},
  pages        = {152},
  year         = {2023},
  url          = {https://doi.org/10.1186/s12859-023-05281-5},
  doi          = {10.1186/S12859-023-05281-5},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/CaiLZXHLGH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangCDGGLMSTYYZZLM23,
  author       = {Jiyao Wang and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  Shennan Lu and
                  Gabriele H. Marchler and
                  James S. Song and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Mingzhang Yang and
                  Dachuan Zhang and
                  Chanjuan Zheng and
                  Christopher J. Lanczycki and
                  Aron Marchler{-}Bauer},
  title        = {The conserved domain database in 2023},
  journal      = {Nucleic Acids Res.},
  volume       = {51},
  number       = {{D1}},
  pages        = {384--388},
  year         = {2023},
  url          = {https://doi.org/10.1093/nar/gkac1096},
  doi          = {10.1093/NAR/GKAC1096},
  timestamp    = {Fri, 18 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/WangCDGGLMSTYYZZLM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HuangZLDWZL22,
  author       = {Haojie Huang and
                  Gongming Zhou and
                  Xuejun Liu and
                  Lei Deng and
                  Chen Wu and
                  Dachuan Zhang and
                  Hui Liu},
  title        = {Contrastive learning-based computational histopathology predict differential
                  expression of cancer driver genes},
  journal      = {Briefings Bioinform.},
  volume       = {23},
  number       = {5},
  year         = {2022},
  url          = {https://doi.org/10.1093/bib/bbac294},
  doi          = {10.1093/BIB/BBAC294},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/HuangZLDWZL22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunDCZHH22,
  author       = {Dandan Sun and
                  Shaozhen Ding and
                  Pengli Cai and
                  Dachuan Zhang and
                  Mengying Han and
                  Qian{-}Nan Hu},
  title        = {BioBulkFoundary: a customized webserver for exploring biosynthetic
                  potentials of bulk chemicals},
  journal      = {Bioinform.},
  volume       = {38},
  number       = {22},
  pages        = {5137--5138},
  year         = {2022},
  url          = {https://doi.org/10.1093/bioinformatics/btac640},
  doi          = {10.1093/BIOINFORMATICS/BTAC640},
  timestamp    = {Sat, 25 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SunDCZHH22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bspc/WuCSZHMWY22,
  author       = {Guoqing Wu and
                  Xi Chen and
                  Zhifeng Shi and
                  Dachuan Zhang and
                  Zhaoyu Hu and
                  Ying Mao and
                  Yuanyuan Wang and
                  Jinhua Yu},
  title        = {Convolutional neural network with coarse-to-fine resolution fusion
                  and residual learning structures for cross-modality image synthesis},
  journal      = {Biomed. Signal Process. Control.},
  volume       = {71},
  number       = {Part},
  pages        = {103199},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.bspc.2021.103199},
  doi          = {10.1016/J.BSPC.2021.103199},
  timestamp    = {Wed, 21 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bspc/WuCSZHMWY22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gsis/XuZLOW22,
  author       = {Xiaocong Xu and
                  Dachuan Zhang and
                  Xiaoping Liu and
                  Jinpei Ou and
                  Xinxin Wu},
  title        = {Simulating multiple urban land use changes by integrating transportation
                  accessibility and a vector-based cellular automata: a case study on
                  city of Toronto},
  journal      = {Geo spatial Inf. Sci.},
  volume       = {25},
  number       = {3},
  pages        = {439--456},
  year         = {2022},
  url          = {https://doi.org/10.1080/10095020.2022.2043730},
  doi          = {10.1080/10095020.2022.2043730},
  timestamp    = {Sun, 13 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/gsis/XuZLOW22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tgis/Zhuang0YZHHZZL22,
  author       = {Haoming Zhuang and
                  Xiaoping Liu and
                  Yuchao Yan and
                  Dachuan Zhang and
                  Jialyu He and
                  Jinqiang He and
                  Xinchang Zhang and
                  Honghui Zhang and
                  Manchun Li},
  title        = {Integrating a deep forest algorithm with vector-based cellular automata
                  for urban land change simulation},
  journal      = {Trans. {GIS}},
  volume       = {26},
  number       = {4},
  pages        = {2056--2080},
  year         = {2022},
  url          = {https://doi.org/10.1111/tgis.12935},
  doi          = {10.1111/TGIS.12935},
  timestamp    = {Wed, 01 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tgis/Zhuang0YZHHZZL22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2204-11994,
  author       = {Haojie Huang and
                  Gongming Zhou and
                  Xuejun Liu and
                  Lei Deng and
                  Chen Wu and
                  Dachuan Zhang and
                  Hui Liu},
  title        = {Contrastive learning-based computational histopathology predict differential
                  expression of cancer driver genes},
  journal      = {CoRR},
  volume       = {abs/2204.11994},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2204.11994},
  doi          = {10.48550/ARXIV.2204.11994},
  eprinttype    = {arXiv},
  eprint       = {2204.11994},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2204-11994.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aisy/ZhangZJWYLWWXC21,
  author       = {Dachuan Zhang and
                  Jiawei Zhang and
                  Yukun Jian and
                  Baoyi Wu and
                  Huizhen Yan and
                  Huanhuan Lu and
                  Shuxin Wei and
                  Si Wu and
                  Qunji Xue and
                  Tao Chen},
  title        = {Multi-Field Synergy Manipulating Soft Polymeric Hydrogel Transformers},
  journal      = {Adv. Intell. Syst.},
  volume       = {3},
  number       = {4},
  pages        = {2000208},
  year         = {2021},
  url          = {https://doi.org/10.1002/aisy.202000208},
  doi          = {10.1002/AISY.202000208},
  timestamp    = {Mon, 01 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/aisy/ZhangZJWYLWWXC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RenZTCZH21,
  author       = {Ailin Ren and
                  Dachuan Zhang and
                  Yu Tian and
                  Pengli Cai and
                  Tong Zhang and
                  Qian{-}Nan Hu},
  title        = {Transcriptor: a comprehensive platform for annotation of the enzymatic
                  functions of transcripts},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {3},
  pages        = {434--435},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btaa685},
  doi          = {10.1093/BIOINFORMATICS/BTAA685},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/RenZTCZH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangZLSDCCRHLJ21,
  author       = {Dachuan Zhang and
                  Tong Zhang and
                  Sheng Liu and
                  Dandan Sun and
                  Shaozhen Ding and
                  Xingxiang Cheng and
                  Pengli Cai and
                  Ailin Ren and
                  Mengying Han and
                  Dongliang Liu and
                  Cancan Jia and
                  Linlin Gong and
                  Rui Zhang and
                  Huadong Xing and
                  Weizhong Tu and
                  Junni Chen and
                  Qian{-}Nan Hu},
  title        = {{SARS2020:} an integrated platform for identification of novel coronavirus
                  by a consensus sequence-function model},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {8},
  pages        = {1182--1183},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btaa767},
  doi          = {10.1093/BIOINFORMATICS/BTAA767},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ZhangZLSDCCRHLJ21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanZDTCYSLGJCTCH21,
  author       = {Mengying Han and
                  Dachuan Zhang and
                  Shaozhen Ding and
                  Yu Tian and
                  Xingxiang Cheng and
                  Le Yuan and
                  Dandan Sun and
                  Dongliang Liu and
                  Linlin Gong and
                  Cancan Jia and
                  Pengli Cai and
                  Weizhong Tu and
                  Junni Chen and
                  Qian{-}Nan Hu},
  title        = {ChemHub: a knowledgebase of functional chemicals for synthetic biology
                  studies},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {22},
  pages        = {4275--4276},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btab360},
  doi          = {10.1093/BIOINFORMATICS/BTAB360},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/HanZDTCYSLGJCTCH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tgrs/HeLLWZZLY21,
  author       = {Jialyu He and
                  Xia Li and
                  Penghua Liu and
                  Xinxin Wu and
                  Jinbao Zhang and
                  Dachuan Zhang and
                  Xiaojuan Liu and
                  Yao Yao},
  title        = {Accurate Estimation of the Proportion of Mixed Land Use at the Street-Block
                  Level by Integrating High Spatial Resolution Images and Geospatial
                  Big Data},
  journal      = {{IEEE} Trans. Geosci. Remote. Sens.},
  volume       = {59},
  number       = {8},
  pages        = {6357--6370},
  year         = {2021},
  url          = {https://doi.org/10.1109/TGRS.2020.3028622},
  doi          = {10.1109/TGRS.2020.3028622},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tgrs/HeLLWZZLY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2102-11033,
  author       = {Dachuan Zhang and
                  Haoyang Zhang and
                  Zhisheng Wei and
                  Yan Li and
                  Zhiheng Mao and
                  Chunmeng He and
                  Haorui Ma and
                  Xin Zeng and
                  Xiaoling Xie and
                  Xingran Kou and
                  Bingwen Zhang},
  title        = {IFoodCloud: {A} Platform for Real-time Sentiment Analysis of Public
                  Opinion about Food Safety in China},
  journal      = {CoRR},
  volume       = {abs/2102.11033},
  year         = {2021},
  url          = {https://arxiv.org/abs/2102.11033},
  eprinttype    = {arXiv},
  eprint       = {2102.11033},
  timestamp    = {Wed, 24 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2102-11033.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SunCTDZCH20,
  author       = {Dandan Sun and
                  Xingxiang Cheng and
                  Yu Tian and
                  Shaozhen Ding and
                  Dachuan Zhang and
                  Pengli Cai and
                  Qian{-}Nan Hu},
  title        = {EnzyMine: a comprehensive database for enzyme function annotation
                  with enzymatic reaction chemical feature},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2020},
  year         = {2020},
  url          = {https://doi.org/10.1093/database/baaa065},
  doi          = {10.1093/DATABASE/BAAA065},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biodb/SunCTDZCH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangYZLGMPWLMWB20,
  author       = {Jiyao Wang and
                  Philippe Youkharibache and
                  Dachuan Zhang and
                  Christopher J. Lanczycki and
                  Renata C. Geer and
                  Thomas Madej and
                  Lon Phan and
                  Minghong Ward and
                  Shennan Lu and
                  Gabriele H. Marchler and
                  Yanli Wang and
                  Stephen H. Bryant and
                  Lewis Y. Geer and
                  Aron Marchler{-}Bauer},
  title        = {iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations
                  of biomolecular structures},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {1},
  pages        = {131--135},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btz502},
  doi          = {10.1093/BIOINFORMATICS/BTZ502},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangYZLGMPWLMWB20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TianWYDCZRZTCH20,
  author       = {Yu Tian and
                  Ling Wu and
                  Le Yuan and
                  Shaozhen Ding and
                  Fu Chen and
                  Tong Zhang and
                  Ailin Ren and
                  Dachuan Zhang and
                  Weizhong Tu and
                  Junni Chen and
                  Qian{-}Nan Hu},
  title        = {BCSExplorer: a customized biosynthetic chemical space explorer with
                  multifunctional objective function analysis},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {5},
  pages        = {1642--1643},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btz755},
  doi          = {10.1093/BIOINFORMATICS/BTZ755},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/TianWYDCZRZTCH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChengSZTDCH20,
  author       = {Xingxiang Cheng and
                  Dandan Sun and
                  Dachuan Zhang and
                  Yu Tian and
                  Shaozhen Ding and
                  Pengli Cai and
                  Qian{-}Nan Hu},
  title        = {RxnBLAST: molecular scaffold and reactive chemical environment feature
                  extractor for biochemical reactions},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {9},
  pages        = {2946--2947},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btaa036},
  doi          = {10.1093/BIOINFORMATICS/BTAA036},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChengSZTDCH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LuWCDGGGHMSTYYZ20,
  author       = {Shennan Lu and
                  Jiyao Wang and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Renata C. Geer and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  David I. Hurwitz and
                  Gabriele H. Marchler and
                  James S. Song and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Mingzhang Yang and
                  Dachuan Zhang and
                  Chanjuan Zheng and
                  Christopher J. Lanczycki and
                  Aron Marchler{-}Bauer},
  title        = {{CDD/SPARCLE:} the conserved domain database in 2020},
  journal      = {Nucleic Acids Res.},
  volume       = {48},
  number       = {Database-Issue},
  pages        = {D265--D268},
  year         = {2020},
  url          = {https://doi.org/10.1093/nar/gkz991},
  doi          = {10.1093/NAR/GKZ991},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LuWCDGGGHMSTYYZ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DingTCZCSYCTWH20,
  author       = {Shaozhen Ding and
                  Yu Tian and
                  Pengli Cai and
                  Dachuan Zhang and
                  Xingxiang Cheng and
                  Dandan Sun and
                  Le Yuan and
                  Junni Chen and
                  Weizhong Tu and
                  Dong{-}Qing Wei and
                  Qian{-}Nan Hu},
  title        = {novoPathFinder: a webserver of designing novel-pathway with integrating
                  GEM-model},
  journal      = {Nucleic Acids Res.},
  volume       = {48},
  number       = {Webserver-Issue},
  pages        = {W477--W487},
  year         = {2020},
  url          = {https://doi.org/10.1093/nar/gkaa230},
  doi          = {10.1093/NAR/GKAA230},
  timestamp    = {Tue, 14 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/DingTCZCSYCTWH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerY17,
  author       = {Aron Marchler{-}Bauer and
                  Bo Yu and
                  Lianyi Han and
                  Jane He and
                  Christopher J. Lanczycki and
                  Shennan Lu and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Renata C. Geer and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  David I. Hurwitz and
                  Fu Lu and
                  Gabriele H. Marchler and
                  James S. Song and
                  Narmada Thanki and
                  Zhouxi Wang and
                  Roxanne A. Yamashita and
                  Dachuan Zhang and
                  Chanjuan Zheng and
                  Lewis Y. Geer and
                  Stephen H. Bryant},
  title        = {{CDD/SPARCLE:} functional classification of proteins via subfamily
                  domain architectures},
  journal      = {Nucleic Acids Res.},
  volume       = {45},
  number       = {Database-Issue},
  pages        = {D200--D203},
  year         = {2017},
  url          = {https://doi.org/10.1093/nar/gkw1129},
  doi          = {10.1093/NAR/GKW1129},
  timestamp    = {Tue, 26 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerY17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tie/CuiZYL17,
  author       = {Peiling Cui and
                  Dachuan Zhang and
                  Shan Yang and
                  Haitao Li},
  title        = {Friction Compensation Based on Time-Delay Control and Internal Model
                  Control for a Gimbal System in Magnetically Suspended {CMG}},
  journal      = {{IEEE} Trans. Ind. Electron.},
  volume       = {64},
  number       = {5},
  pages        = {3798--3807},
  year         = {2017},
  url          = {https://doi.org/10.1109/TIE.2016.2644620},
  doi          = {10.1109/TIE.2016.2644620},
  timestamp    = {Fri, 22 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tie/CuiZYL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/YaoLZLZ17,
  author       = {Yao Yao and
                  Xiaoping Liu and
                  Dachuan Zhang and
                  Zhaotang Liang and
                  Yatao Zhang},
  title        = {Simulation of Urban Expansion and Farmland Loss in China by Integrating
                  Cellular Automata and Random Forest},
  journal      = {CoRR},
  volume       = {abs/1705.05651},
  year         = {2017},
  url          = {http://arxiv.org/abs/1705.05651},
  eprinttype    = {arXiv},
  eprint       = {1705.05651},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/YaoLZLZ17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerDGLCGGHGHLLMSTWYZZB15,
  author       = {Aron Marchler{-}Bauer and
                  Myra K. Derbyshire and
                  Noreen R. Gonzales and
                  Shennan Lu and
                  Farideh Chitsaz and
                  Lewis Y. Geer and
                  Renata C. Geer and
                  Jane He and
                  Marc Gwadz and
                  David I. Hurwitz and
                  Christopher J. Lanczycki and
                  Fu Lu and
                  Gabriele H. Marchler and
                  James S. Song and
                  Narmada Thanki and
                  Zhouxi Wang and
                  Roxanne A. Yamashita and
                  Dachuan Zhang and
                  Chanjuan Zheng and
                  Stephen H. Bryant},
  title        = {{CDD:} NCBI's conserved domain database},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {222--226},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gku1221},
  doi          = {10.1093/NAR/GKU1221},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerDGLCGGHGHLLMSTWYZZB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadejLZTGMB14,
  author       = {Thomas Madej and
                  Christopher J. Lanczycki and
                  Dachuan Zhang and
                  Paul A. Thiessen and
                  Renata C. Geer and
                  Aron Marchler{-}Bauer and
                  Stephen H. Bryant},
  title        = {{MMDB} and {VAST+:} tracking structural similarities between macromolecular
                  complexes},
  journal      = {Nucleic Acids Res.},
  volume       = {42},
  number       = {Database-Issue},
  pages        = {297--303},
  year         = {2014},
  url          = {https://doi.org/10.1093/nar/gkt1208},
  doi          = {10.1093/NAR/GKT1208},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MadejLZTGMB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerZCDGGGGHLLLMSTYZB13,
  author       = {Aron Marchler{-}Bauer and
                  Chanjuan Zheng and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Lewis Y. Geer and
                  Renata C. Geer and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  David I. Hurwitz and
                  Christopher J. Lanczycki and
                  Fu Lu and
                  Shennan Lu and
                  Gabriele H. Marchler and
                  James S. Song and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Dachuan Zhang and
                  Stephen H. Bryant},
  title        = {{CDD:} conserved domains and protein three-dimensional structure},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Database-Issue},
  pages        = {348--352},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gks1243},
  doi          = {10.1093/NAR/GKS1243},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerZCDGGGGHLLLMSTYZB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadejAFGGLLLMPCTWZB12,
  author       = {Thomas Madej and
                  Kenneth J. Addess and
                  Jessica H. Fong and
                  Lewis Y. Geer and
                  Renata C. Geer and
                  Christopher J. Lanczycki and
                  Chunlei Liu and
                  Shennan Lu and
                  Aron Marchler{-}Bauer and
                  Anna R. Panchenko and
                  Jie Chen and
                  Paul A. Thiessen and
                  Yanli Wang and
                  Dachuan Zhang and
                  Stephen H. Bryant},
  title        = {{MMDB:} 3D structures and macromolecular interactions},
  journal      = {Nucleic Acids Res.},
  volume       = {40},
  number       = {Database-Issue},
  pages        = {461--464},
  year         = {2012},
  url          = {https://doi.org/10.1093/nar/gkr1162},
  doi          = {10.1093/NAR/GKR1162},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/MadejAFGGLLLMPCTWZB12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShoemakerZTTFMBMP12,
  author       = {Benjamin A. Shoemaker and
                  Dachuan Zhang and
                  Manoj Tyagi and
                  Ratna R. Thangudu and
                  Jessica H. Fong and
                  Aron Marchler{-}Bauer and
                  Stephen H. Bryant and
                  Thomas Madej and
                  Anna R. Panchenko},
  title        = {{IBIS} (Inferred Biomolecular Interaction Server) reports, predicts
                  and integrates multiple types of conserved interactions for proteins},
  journal      = {Nucleic Acids Res.},
  volume       = {40},
  number       = {Database-Issue},
  pages        = {834--840},
  year         = {2012},
  url          = {https://doi.org/10.1093/nar/gkr997},
  doi          = {10.1093/NAR/GKR997},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/ShoemakerZTTFMBMP12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerLACDDFGGGGHJKLLMMORSTYZZZB11,
  author       = {Aron Marchler{-}Bauer and
                  Shennan Lu and
                  John B. Anderson and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Carol DeWeese{-}Scott and
                  Jessica H. Fong and
                  Lewis Y. Geer and
                  Renata C. Geer and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  David I. Hurwitz and
                  John D. Jackson and
                  Zhaoxi Ke and
                  Christopher J. Lanczycki and
                  Fu Lu and
                  Gabriele H. Marchler and
                  Mikhail Mullokandov and
                  Marina V. Omelchenko and
                  Cynthia L. Robertson and
                  James S. Song and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Dachuan Zhang and
                  Naigong Zhang and
                  Chanjuan Zheng and
                  Stephen H. Bryant},
  title        = {{CDD:} a Conserved Domain Database for the functional annotation of
                  proteins},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Database-Issue},
  pages        = {225--229},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkq1189},
  doi          = {10.1093/NAR/GKQ1189},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerLACDDFGGGGHJKLLMMORSTYZZZB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShoemakerZTTFMBMP10,
  author       = {Benjamin A. Shoemaker and
                  Dachuan Zhang and
                  Ratna R. Thangudu and
                  Manoj Tyagi and
                  Jessica H. Fong and
                  Aron Marchler{-}Bauer and
                  Stephen H. Bryant and
                  Tom Madej and
                  Anna R. Panchenko},
  title        = {Inferred Biomolecular Interaction Server - a web server to analyze
                  and predict protein interacting partners and binding sites},
  journal      = {Nucleic Acids Res.},
  volume       = {38},
  number       = {Database-Issue},
  pages        = {518--524},
  year         = {2010},
  url          = {https://doi.org/10.1093/nar/gkp842},
  doi          = {10.1093/NAR/GKP842},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/ShoemakerZTTFMBMP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09,
  author       = {Aron Marchler{-}Bauer and
                  John B. Anderson and
                  Farideh Chitsaz and
                  Myra K. Derbyshire and
                  Carol DeWeese{-}Scott and
                  Jessica H. Fong and
                  Lewis Y. Geer and
                  Renata C. Geer and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  Siqian He and
                  David I. Hurwitz and
                  John D. Jackson and
                  Zhaoxi Ke and
                  Christopher J. Lanczycki and
                  Cynthia A. Liebert and
                  Chunlei Liu and
                  Fu Lu and
                  Shennan Lu and
                  Gabriele H. Marchler and
                  Mikhail Mullokandov and
                  James S. Song and
                  Asba Tasneem and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Dachuan Zhang and
                  Naigong Zhang and
                  Stephen H. Bryant},
  title        = {{CDD:} specific functional annotation with the Conserved Domain Database},
  journal      = {Nucleic Acids Res.},
  volume       = {37},
  number       = {Database-Issue},
  pages        = {205--210},
  year         = {2009},
  url          = {https://doi.org/10.1093/nar/gkn845},
  doi          = {10.1093/NAR/GKN845},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerADDGGHHHJKKLLLLLMMSTYYZB07,
  author       = {Aron Marchler{-}Bauer and
                  John B. Anderson and
                  Myra K. Derbyshire and
                  Carol DeWeese{-}Scott and
                  Noreen R. Gonzales and
                  Marc Gwadz and
                  Luning Hao and
                  Siqian He and
                  David I. Hurwitz and
                  John D. Jackson and
                  Zhaoxi Ke and
                  Dmitri M. Krylov and
                  Christopher J. Lanczycki and
                  Cynthia A. Liebert and
                  Chunlei Liu and
                  Fu Lu and
                  Shennan Lu and
                  Gabriele H. Marchler and
                  Mikhail Mullokandov and
                  James S. Song and
                  Narmada Thanki and
                  Roxanne A. Yamashita and
                  Jodie J. Yin and
                  Dachuan Zhang and
                  Stephen H. Bryant},
  title        = {{CDD:} a conserved domain database for interactive domain family analysis},
  journal      = {Nucleic Acids Res.},
  volume       = {35},
  number       = {Database-Issue},
  pages        = {237--240},
  year         = {2007},
  url          = {https://doi.org/10.1093/nar/gkl951},
  doi          = {10.1093/NAR/GKL951},
  timestamp    = {Fri, 18 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerADDGGHHHJKKLLLLLMMSTYYZB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05,
  author       = {Aron Marchler{-}Bauer and
                  John B. Anderson and
                  Praveen F. Cherukuri and
                  Carol DeWeese{-}Scott and
                  Lewis Y. Geer and
                  Marc Gwadz and
                  Siqian He and
                  David I. Hurwitz and
                  John D. Jackson and
                  Zhaoxi Ke and
                  Christopher J. Lanczycki and
                  Cynthia A. Liebert and
                  Chunlei Liu and
                  Fu Lu and
                  Gabriele H. Marchler and
                  Mikhail Mullokandov and
                  Benjamin A. Shoemaker and
                  Vahan Simonyan and
                  James S. Song and
                  Paul A. Thiessen and
                  Roxanne A. Yamashita and
                  Jodie J. Yin and
                  Dachuan Zhang and
                  Stephen H. Bryant},
  title        = {{CDD:} a Conserved Domain Database for protein classification},
  journal      = {Nucleic Acids Res.},
  volume       = {33},
  number       = {Database-Issue},
  pages        = {192--196},
  year         = {2005},
  url          = {https://doi.org/10.1093/nar/gki069},
  doi          = {10.1093/NAR/GKI069},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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