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ORCIDHalil Kilicoglu
- > Home > Persons > Halil Kilicoglu
Publications
- 2023
[c39]Yongkang Xiao, Yu Hou, Huixue Zhou, Gayo Diallo, Marcelo Fiszman, Julian Wolfson, Halil Kilicoglu, You Chen, Hua Xu, William G. Mantyh, Rui Zhang:
Repurposing Drugs for Alzheimer's Diseases through Link Prediction on Biomedical Literature. ICHI 2023: 750-752- 2022
- [j31]Dalton Schutte, Jake Vasilakes, Anusha Bompelli, Yuqi Zhou, Marcelo Fiszman, Hua Xu, Halil Kilicoglu, Jeffrey R. Bishop, Terrence Adam, Rui Zhang:
Discovering novel drug-supplement interactions using SuppKG generated from the biomedical literature. J. Biomed. Informatics 131: 104120 (2022) - 2021
- [j28]Rui Zhang, Dimitar Hristovski, Dalton Schutte, Andrej Kastrin
, Marcelo Fiszman, Halil Kilicoglu:
Drug repurposing for COVID-19 via knowledge graph completion. J. Biomed. Informatics 115: 103696 (2021) - [i5]Dalton Schutte, Jake Vasilakes, Anusha Bompelli, Yuqi Zhou, Marcelo Fiszman, Hua Xu, Halil Kilicoglu, Jeffrey R. Bishop, Terrence Adam, Rui Zhang:
Discovering novel drug-supplement interactions using a dietary supplements knowledge graph generated from the biomedical literature. CoRR abs/2106.12741 (2021) - 2020
- [j26]Halil Kilicoglu, Graciela Rosemblat, Marcelo Fiszman, Dongwook Shin:
Broad-coverage biomedical relation extraction with SemRep. BMC Bioinform. 21(1): 188 (2020) - [i4]Rui Zhang, Dimitar Hristovski, Dalton Schutte, Andrej Kastrin, Marcelo Fiszman, Halil Kilicoglu:
Drug Repurposing for COVID-19 via Knowledge Graph Completion. CoRR abs/2010.09600 (2020) - 2019
- [j23]Graciela Rosemblat, Marcelo Fiszman, Dongwook Shin, Halil Kilicoglu:
Towards a characterization of apparent contradictions in the biomedical literature using context analysis. J. Biomed. Informatics 98 (2019) - 2018
- [j21]Thomas C. Rindflesch, Catherine Blake, Michael J. Cairelli, Marcelo Fiszman, Caroline J. Zeiss, Halil Kilicoglu:
Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing. J. Biomed. Semant. 9(1): 25:1-25:14 (2018) - 2016
- [j17]Halil Kilicoglu, Graciela Rosemblat, Marcelo Fiszman, Thomas C. Rindflesch:
Sortal anaphora resolution to enhance relation extraction from biomedical literature. BMC Bioinform. 17: 163 (2016) - 2015
- [c22]Halil Kilicoglu, Marcelo Fiszman, Kirk Roberts, Dina Demner-Fushman:
An Ensemble Method for Spelling Correction in Consumer Health Questions. AMIA 2015 - 2014
- [j15]Rui Zhang, Michael J. Cairelli, Marcelo Fiszman, Graciela Rosemblat, Halil Kilicoglu, Thomas C. Rindflesch, Serguei V. S. Pakhomov, Genevieve B. Melton:
Using semantic predications to uncover drug-drug interactions in clinical data. J. Biomed. Informatics 49: 134-147 (2014) - [c21]Kirk Roberts, Halil Kilicoglu, Marcelo Fiszman, Dina Demner-Fushman:
Automatically Classifying Question Types for Consumer Health Questions. AMIA 2014 - [c20]Kirk Roberts, Halil Kilicoglu, Marcelo Fiszman, Dina Demner-Fushman:
Decomposing Consumer Health Questions. BioNLP@ACL 2014: 29-37 - [c18]Kirk Roberts, Kate Masterton, Marcelo Fiszman, Halil Kilicoglu, Dina Demner-Fushman:
Annotating Question Decomposition on Complex Medical Questions. LREC 2014: 2598-2602 - 2013
- [c17]Rashmi Mishra, Guilherme Del Fiol, Halil Kilicoglu, Siddhartha Jonnalagadda, Marcelo Fiszman:
Automatically Extracting Clinically Useful Sentences from UpToDate to Support Clinicians' Information Needs. AMIA 2013 - [c16]Halil Kilicoglu, Marcelo Fiszman, Dina Demner-Fushman:
Interpreting Consumer Health Questions: The Role of Anaphora and Ellipsis. BioNLP@ACL 2013: 54-62 - 2012
- [j12]Halil Kilicoglu, Dongwook Shin, Marcelo Fiszman, Graciela Rosemblat, Thomas C. Rindflesch:
SemMedDB: a PubMed-scale repository of biomedical semantic predications. Bioinform. 28(23): 3158-3160 (2012) - 2011
- [j9]Halil Kilicoglu, Graciela Rosemblat, Marcelo Fiszman, Thomas C. Rindflesch:
Constructing a semantic predication gold standard from the biomedical literature. BMC Bioinform. 12: 486 (2011) - [j7]Thomas C. Rindflesch, Halil Kilicoglu, Marcelo Fiszman, Graciela Rosemblat, Dongwook Shin:
Semantic MEDLINE: An advanced information management application for biomedicine. Inf. Serv. Use 31(1-2): 15-21 (2011) - 2010
- [j6]Alla Keselman, Graciela Rosemblat, Halil Kilicoglu, Marcelo Fiszman, Honglan Jin, Dongwook Shin, Thomas C. Rindflesch:
Adapting semantic natural language processing technology to address information overload in influenza epidemic management. J. Assoc. Inf. Sci. Technol. 61(12): 2531-2543 (2010) - [c13]Halil Kilicoglu, Marcelo Fiszman, Graciela Rosemblat, Sean Marimpietri, Thomas C. Rindflesch:
Arguments of Nominals in Semantic Interpretation of Biomedical Text. BioNLP@ACL 2010: 46-54 - [c11]Marcelo Fiszman, Bruce E. Bray, Dongwook Shin, Halil Kilicoglu, Glen C. Bennett, Olivier Bodenreider, Thomas C. Rindflesch:
Combining Relevance Assignment with Quality of the Evidence to Support Guideline Development. MedInfo 2010: 709-713 - 2009
- [j4]Marcelo Fiszman, Dina Demner-Fushman, Halil Kilicoglu, Thomas C. Rindflesch:
Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation. J. Biomed. Informatics 42(5): 801-813 (2009) - 2006
- [c6]Marcelo Fiszman, Thomas C. Rindflesch, Halil Kilicoglu:
Summarizing Drug Information in Medline Citations. AMIA 2006 - 2005
- [c5]Thomas C. Rindflesch, Serguei Pakhomov, Marcelo Fiszman, Halil Kilicoglu, Vincent R. Sánchez:
Medical Facts to Support Inferencing in Natural Language Processing. AMIA 2005 - 2004
- [c4]Marcelo Fiszman, Thomas C. Rindflesch, Halil Kilicoglu:
Summarization of an Online Medical Encyclopedia. MedInfo 2004: 506-510 - 2003
- [c3]Marcelo Fiszman, Thomas C. Rindflesch, Halil Kilicoglu:
Integrating a Hypernymic Proposition Interpreter into a Semantic Processor for Biomedical Texts. AMIA 2003 - [c2]Marcelo Fiszman, Thomas C. Rindflesch, Halil Kilicoglu:
Interpreting Hypernymic Propositions in an Online Medical Encyclopedia. AMIA 2003
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