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ORCIDCarolyn J. Mattingly
- > Home > Persons > Carolyn J. Mattingly
Publications
- 2023
[j23]Allan Peter Davis
, Thomas C. Wiegers, Robin J. Johnson, Daniela Sciaky, Jolene Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database (CTD): update 2023. Nucleic Acids Res. 51(D1): 1257-1262 (2023)- 2021
- [j22]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database (CTD): update 2021. Nucleic Acids Res. 49(Database-Issue): D1138-D1143 (2021) - 2019
- [j21]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Roy McMorran, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2019. Nucleic Acids Res. 47(Database-Issue): D948-D954 (2019) - 2017
- [j20]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Benjamin L. King, Roy McMorran, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2017. Nucleic Acids Res. 45(Database-Issue): D972-D978 (2017) - 2016
- [j19]Jiao Li, Yueping Sun, Robin J. Johnson, Daniela Sciaky, Chih-Hsuan Wei, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Thomas C. Wiegers, Zhiyong Lu:
BioCreative V CDR task corpus: a resource for chemical disease relation extraction. Database J. Biol. Databases Curation 2016 (2016) - [j18]Dennis J. Pelletier, Thomas C. Wiegers, Ahmed Enayetallah, C. Kibbey, Mark Gosink, P. Koza-Taylor, Carolyn J. Mattingly, M. Lawton:
ToxEvaluator: an integrated computational platform to aid the interpretation of toxicology study-related findings. Database J. Biol. Databases Curation 2016 (2016) - [j17]Chih-Hsuan Wei, Yifan Peng, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Jiao Li, Thomas C. Wiegers, Zhiyong Lu:
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j16]Allan Peter Davis, Cynthia J. Grondin, Kelley Lennon-Hopkins, Cynthia A. Saraceni-Richards, Daniela Sciaky, Benjamin L. King, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database's 10th year anniversary: update 2015. Nucleic Acids Res. 43(Database-Issue): 914-920 (2015) - 2014
- [j15]Donald C. Comeau, Riza Theresa Batista-Navarro, Hong-Jie Dai, Rezarta Islamaj Dogan, Antonio Jimeno-Yepes, Ritu Khare, Zhiyong Lu, Hernani Marques, Carolyn J. Mattingly, Mariana L. Neves, Yifan Peng, Rafal Rak, Fabio Rinaldi, Richard Tzong-Han Tsai, Karin Verspoor, Thomas C. Wiegers, Cathy H. Wu, W. John Wilbur:
BioC interoperability track overview. Database J. Biol. Databases Curation 2014 (2014) - [j14]Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly:
Web services-based text-mining demonstrates broad impacts for interoperability and process simplification. Database J. Biol. Databases Curation 2014 (2014) - 2013
- [j13]Allan Peter Davis, Thomas C. Wiegers, Phoebe M. Roberts, Benjamin L. King, Jean M. Lay, Kelley Lennon-Hopkins, Daniela Sciaky, Robin J. Johnson, Heather Keating, Nigel Greene, Robert Hernandez, Kevin J. McConnell, Ahmed Enayetallah, Carolyn J. Mattingly:
A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug-disease and drug-phenotype interactions. Database J. Biol. Databases Curation 2013 (2013) - [j12]Allan Peter Davis, Cynthia G. Murphy, Robin J. Johnson, Jean M. Lay, Kelley Lennon-Hopkins, Cynthia A. Saraceni-Richards, Daniela Sciaky, Benjamin L. King, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2013. Nucleic Acids Res. 41(Database-Issue): 1104-1114 (2013) - 2012
- [j11]Susan M. Bello, Joel E. Richardson, Allan Peter Davis, Thomas C. Wiegers, Carolyn J. Mattingly, Mary E. Dolan, Cynthia L. Smith, Judith A. Blake, Janan T. Eppig:
Disease model curation improvements at Mouse Genome Informatics. Database J. Biol. Databases Curation 2012 (2012) - [j10]Allan Peter Davis, Robin J. Johnson, Kelley Lennon-Hopkins, Daniela Sciaky, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2012 (2012) - [j9]Allan Peter Davis, Thomas C. Wiegers, Michael C. Rosenstein, Carolyn J. Mattingly:
MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2012 (2012) - [j8]Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly:
Collaborative biocuration - text-mining development task for document prioritization for curation. Database J. Biol. Databases Curation 2012 (2012) - [j7]Cathy H. Wu, Cecilia N. Arighi, Kevin Bretonnel Cohen, Lynette Hirschman, Martin Krallinger, Zhiyong Lu, Carolyn J. Mattingly, Alfonso Valencia, Thomas C. Wiegers, W. John Wilbur:
BioCreative-2012 Virtual Issue. Database J. Biol. Databases Curation 2012 (2012) - 2011
- [j6]Allan Peter Davis, Thomas C. Wiegers, Cynthia G. Murphy, Carolyn J. Mattingly:
The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2011 (2011) - [j5]Allan Peter Davis, Benjamin L. King, Susan Mockus, Cynthia G. Murphy, Cynthia A. Saraceni-Richards, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2011. Nucleic Acids Res. 39(Database-Issue): 1067-1072 (2011) - [c3]Susan M. Bello, Allan Peter Davis, Thomas C. Wiegers, Mary E. Dolan, Cynthia L. Smith, Joel E. Richardson, Judith A. Blake, Carolyn J. Mattingly, Janan T. Eppig:
Waiting for a Robust Disease Ontology: A Merger of OMIM and MeSH as a Practical Interim Solution. ICBO 2011 - 2009
- [j4]Thomas C. Wiegers, Allan Peter Davis, K. Bretonnel Cohen, Lynette Hirschman, Carolyn J. Mattingly:
Text mining and manual curation of chemical-gene-disease networks for the Comparative Toxicogenomics Database (CTD). BMC Bioinform. 10: 326 (2009) - [j2]Allan Peter Davis, Cynthia G. Murphy, Cynthia A. Saraceni-Richards, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks. Nucleic Acids Res. 37(Database-Issue): 786-792 (2009)
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