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ORCIDNikos Makris
- > Home > Persons > Nikos Makris
Publications
- 2024
[i17]Yuxiang Wei, Yuqian Chen, Tengfei Xue, Leo R. Zekelman, Nikos Makris, Yogesh Rathi, Tom Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
A Deep Network for Explainable Prediction of Non-Imaging Phenotypes using Anatomical Multi-View Data. CoRR abs/2401.04579 (2024)- [i16]Yui Lo, Yuqian Chen, Dongnan Liu, Wan Liu, Leo R. Zekelman, Fan Zhang, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
Cross-domain Fiber Cluster Shape Analysis for Language Performance Cognitive Score Prediction. CoRR abs/2403.19001 (2024) - 2023
- [j45]Tengfei Xue, Fan Zhang, Chaoyi Zhang
, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Superficial white matter analysis: An efficient point-cloud-based deep learning framework with supervised contrastive learning for consistent tractography parcellation across populations and dMRI acquisitions. Medical Image Anal. 85: 102759 (2023) - [j44]Yuqian Chen, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Tom Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
Deep fiber clustering: Anatomically informed fiber clustering with self-supervised deep learning for fast and effective tractography parcellation. NeuroImage 273: 120086 (2023) - [c64]Yuqian Chen, Fan Zhang, Leo R. Zekelman, Tengfei Xue, Chaoyi Zhang, Yang Song, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Tractgraphcnn: Anatomically Informed Graph CNN for Classification Using Diffusion MRI Tractography. ISBI 2023: 1-5 - [c63]Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang:
DEEPRGVP: A novel microstructure-informed supervised contrastive learning framework for automated identification of the retinogeniculate pathway using dMRI tractography. ISBI 2023: 1-5 - [c62]Xiao Xu, Yuqian Chen, Leo R. Zekelman, Yogesh Rathi, Nikos Makris, Fan Zhang, Lauren J. O'Donnell:
Tractography-Based Parcellation of Cerebellar Dentate Nuclei via a Deep Nonnegative Matrix Factorization Clustering Method. ISBI 2023: 1-4 - [c61]Yuxiang Wei, Yuqian Chen, Tengfei Xue, Leo R. Zekelman, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
A Deep Network for Explainable Prediction of Non-imaging Phenotypes Using Anatomical Multi-view Data. CDMRI@MICCAI 2023: 165-176 - [c60]Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractCloud: Registration-Free Tractography Parcellation with a Novel Local-Global Streamline Point Cloud Representation. MICCAI (8) 2023: 409-419 - [i15]Yuqian Chen, Fan Zhang, Leo R. Zekelman, Tengfei Xue, Chaoyi Zhang, Yang Song, Nikos Makris, Yogesh Rathi, Tom Weidong Cai, Lauren J. O'Donnell:
TractGraphCNN: anatomically informed graph CNN for classification using diffusion MRI tractography. CoRR abs/2301.01911 (2023) - [i14]Wan Liu, Yuqian Chen, Chuyang Ye, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
Fiber Tract Shape Measures Inform Prediction of Non-Imaging Phenotypes. CoRR abs/2303.09124 (2023) - [i12]Yuqian Chen, Leo R. Zekelman, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. CoRR abs/2307.03982 (2023) - [i11]Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractCloud: Registration-free tractography parcellation with a novel local-global streamline point cloud representation. CoRR abs/2307.09000 (2023) - 2022
- [j40]Leo R. Zekelman, Fan Zhang, Nikos Makris, Jianzhong He, Yuqian Chen, Tengfei Xue, Daniela Liera, Daniel L. Drane, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
White matter association tracts underlying language and theory of mind: An investigation of 809 brains from the Human Connectome Project. NeuroImage 246: 118739 (2022) - [c51]Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Supwma: Consistent and Efficient Tractography Parcellation of Superficial White Matter with Deep Learning. ISBI 2022: 1-5 - [c50]Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. MICCAI (1) 2022: 174-184 - [i10]Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
SupWMA: Consistent and Efficient Tractography Parcellation of Superficial White Matter with Deep Learning. CoRR abs/2201.12528 (2022) - [i8]Yuqian Chen, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Tom Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
DFC: Anatomically Informed Fiber Clustering with Self-supervised Deep Learning for Fast and Effective Tractography Parcellation. CoRR abs/2205.00627 (2022) - [i7]Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Tom Weidong Cai, Lauren J. O'Donnell:
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. CoRR abs/2207.02402 (2022) - [i6]Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learning for Consistent Tractography Parcellation across Populations and dMRI Acquisitions. CoRR abs/2207.08975 (2022) - [i5]Tengfei Xue, Fan Zhang, Leo R. Zekelman, Chaoyi Zhang, Yuqian Chen, Suheyla Cetin Karayumak, Steven D. Pieper, William M. Wells III, Yogesh Rathi, Nikos Makris, Weidong Cai, Lauren J. O'Donnell:
A Novel Supervised Contrastive Regression Framework for Prediction of Neurocognitive Measures Using Multi-Site Harmonized Diffusion MRI Tractography. CoRR abs/2210.07411 (2022) - [i3]Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang:
DeepRGVP: A Novel Microstructure-Informed Supervised Contrastive Learning Framework for Automated Identification Of The Retinogeniculate Pathway Using dMRI Tractography. CoRR abs/2211.08119 (2022) - 2021
- [c44]Yuqian Chen, Chaoyi Zhang, Yang Song, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
Deep Fiber Clustering: Anatomically Informed Unsupervised Deep Learning for Fast and Effective White Matter Parcellation. MICCAI (7) 2021: 497-507 - [i2]Yuqian Chen, Chaoyi Zhang, Yang Song, Nikos Makris, Yogesh Rathi, Tom Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
Deep Fiber Clustering: Anatomically Informed Unsupervised Deep Learning for Fast and Effective White Matter Parcellation. CoRR abs/2107.04938 (2021)
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