Manuela Helmer-Citterich

◀ ▶ joint publications with Pier Federico Gherardini

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Publications

2012
[j26]
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  - journals/bmcbi/BianchiGHA12
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Valerio Bianchi, Pier Federico Gherardini, Manuela Helmer-Citterich, Gabriele Ausiello:
Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities. BMC Bioinform. 13(S-4): S17 (2012)
2011
[j24]
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  - journals/nar/ZanzoniCDGTHV11
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Andreas Zanzoni, Daniel Carbajo, Francesca Diella, Pier Federico Gherardini, Anna Tramontano, Manuela Helmer-Citterich, Allegra Via:
Phospho3D 2.0: an enhanced database of three-dimensional structures of phosphorylation sites. Nucleic Acids Res. 39(Database-Issue): 268-271 (2011)
[j23]
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  - journals/nar/ParcaMGAH11
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Luca Parca, Iolanda Mangone, Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich:
Phosfinder: a web server for the identification of phosphate-binding sites on protein structures. Nucleic Acids Res. 39(Web-Server-Issue): 278-282 (2011)
2009
[j21]
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  - journals/bmcbi/AusielloGGIH09
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Gabriele Ausiello, Pier Federico Gherardini, Elena Gatti, Ottaviano Incani, Manuela Helmer-Citterich:
Structural motifs recurring in different folds recognize the same ligand fragments. BMC Bioinform. 10 (2009)
2008
[j19]
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  - journals/bmcbi/AusielloGMTVH08
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Gabriele Ausiello, Pier Federico Gherardini, Paolo Marcatili, Anna Tramontano, Allegra Via, Manuela Helmer-Citterich:
FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. BMC Bioinform. 9(S-2) (2008)
2007
[j15]
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  - journals/bmcbi/ViaGFATH07
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Allegra Via, Pier Federico Gherardini, Enrico Ferraro, Gabriele Ausiello, Gianpaolo Scalia Tomba, Manuela Helmer-Citterich:
False occurrences of functional motifs in protein sequences highlight evolutionary constraints. BMC Bioinform. 8 (2007)
[j14]
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  - journals/nar/ZanzoniAVGH07
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Andreas Zanzoni, Gabriele Ausiello, Allegra Via, Pier Federico Gherardini, Manuela Helmer-Citterich:
Phospho3D: a database of three-dimensional structures of protein phosphorylation sites. Nucleic Acids Res. 35(Database-Issue): 229-231 (2007)
[j13]
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  - journals/nar/ViaPGRCAH07
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Allegra Via, Daniele Peluso, Pier Federico Gherardini, Emanuele de Rinaldis, Teresa Colombo, Gabriele Ausiello, Manuela Helmer-Citterich:
3dLOGO: a web server for the identification, analysis and use of conserved protein substructures. Nucleic Acids Res. 35(Web-Server-Issue): 416-419 (2007)

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