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ORCIDMathew J. Palakal
Mathew Palakal
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2010 – 2019
- 2016
[c52]Shenhui Jiang, Shiaofen Fang, Sam Bloomquist, Jeremy Keiper, Mathew J. Palakal, Yuni Xia, Shaun J. Grannis:
Healthcare Data Visualization: Geospatial and Temporal Integration. VISIGRAPP (2: IVAPP) 2016: 214-221- 2015
- [j29]K. M. Shabana, K. A. Abdul Nazeer
, Meeta Pradhan, Mathew Palakal:
A computational method for drug repositioning using publicly available gene expression data. BMC Bioinform. 16(S17): S5 (2015) - [j28]Meeta Pradhan, Kshithija Nagulapalli, Lakenvia Ledford, Yogesh Pandit, Mathew J. Palakal:
A system biology approach for understanding the miRNA regulatory network in colon rectal cancer. Int. J. Data Min. Bioinform. 11(1): 1-30 (2015) - [j27]Saeed Mehrabi, Anand Krishnan, Sunghwan Sohn, Alexandra M. Roch, Heidi Schmidt, Joe Kesterson, Chris Beesley, Paul R. Dexter, C. Max Schmidt, Hongfang Liu, Mathew J. Palakal:
DEEPEN: A negation detection system for clinical text incorporating dependency relation into NegEx. J. Biomed. Informatics 54: 213-219 (2015) - [c51]Saeed Mehrabi, Sunghwan Sohn, Dingcheng Li, Joshua J. Pankratz, Terry M. Therneau, Jennifer L. St. Sauver, Hongfang Liu, Mathew J. Palakal:
Temporal Pattern and Association Discovery of Diagnosis Codes Using Deep Learning. ICHI 2015: 408-416 - [c50]Saeed Mehrabi, Anand Krishnan, Alexandra M. Roch, Heidi Schmidt, Dingcheng Li, Joe Kesterson, Chris Beesley, Paul R. Dexter, C. Max Schmidt, Mathew J. Palakal, Hongfang Liu:
Identification of Patients with Family History of Pancreatic Cancer - Investigation of an NLP System Portability. MedInfo 2015: 604-608 - 2014
- [c49]Jeremy Keiper, Shiaofen Fang, Mathew Palakal, Yuni Xia, Sam Bloomquist, Shaun J. Grannis, Weizhi Li, Thanh M. Nguyen, Anand Krishnan:
Demonstrating A Public Health Terrain Data Visualization System. AMIA 2014 - [c48]Anand Krishnan, Jon Sligh, Eric Tinsley, Natalie Crohn, Jean Bandos, Heather Bush, Jason Depasquale, Mathew Palakal:
Causal Association Mining from Geriatric Literature. BIBE 2014: 226-230 - [c47]Deepali Jhamb, Anand Krishnan, Meelia Palakal, Yogesh Pandit, Mathew J. Palakal, Premkumar Duraiswamy:
Identification of protein interaction methods from biomedical literature. ICCABS 2014: 1-6 - [c46]Deepali Jhamb, Meeta Pradhan, Akshay Desai, Mathew J. Palakal, Premkumar Duraiswamy:
A systems biology analysis for the whole genome sequencing data. ICCABS 2014: 1-6 - [c45]K. M. Shabana, K. A. Abdul Nazeer, Meeta Pradhan, Mathew J. Palakal:
A computational method for drug repositioning using publicly available gene expression data. ICCABS 2014: 1-2 - [c44]T. A. Arunanand, K. A. Abdul Nazeer, Mathew J. Palakal, Meeta Pradhan:
A nature-inspired hybrid Fuzzy C-means algorithm for better clustering of biological data sets. ICDSE 2014: 76-82 - [c43]Akshay Desai, Meeta Pradhan, Mathew Palakal, Premkumar Duraiswamy:
CancerEpiDB: A database for DNA methylated genes in cancer. ICDSE 2014: 124-129 - 2013
- [j26]Meeta Pradhan, Akshay Desai, Mathew J. Palakal:
Systems biology approach to stage-wise characterization of epigenetic genes in lung adenocarcinoma. BMC Syst. Biol. 7: 141 (2013) - [c42]Saeed Mehrabi, Anand Krishnan, Eric Tinsley, Jon Sligh, Natalie Crohn, Heather Bush, Jason Depasquale, Jean Bandos, Mathew Palakal:
Event Causality Identification Using Conditional Random Field in Geriatric Care Domain. ICMLA (1) 2013: 339-343 - [c41]Saeed Mehrabi, C. Max Schmidt, Joshua A. Waters, Chris Beesley, Anand Krishnan, Joe Kesterson, Paul R. Dexter, Mohammed A. Al-Haddad, William M. Tierney, Mathew J. Palakal:
An Efficient Pancreatic Cyst Identification Methodology Using Natural Language Processing. MedInfo 2013: 822-826 - 2012
- [j25]Tulip Nandu, Meeta Pradhan, Mathew J. Palakal:
Elucidating gene signatures that control the circadian rhythm in cyanobacteria using bioinformatics methods. BMC Bioinform. 13(S-18): A9 (2012) - [j24]Meeta Pradhan, Kshithija Nagulapalli, Mathew J. Palakal:
Cliques for the identification of gene signatures for colorectal cancer across population. BMC Syst. Biol. 6(S-3): S17 (2012) - 2011
- [j23]Deepali Jhamb, Nandini Rao, Derek J. Milner, Fengyu Song, Jo Ann Cameron, David L. Stocum, Mathew J. Palakal:
Network based transcription factor analysis of regenerating axolotl limbs. BMC Bioinform. 12: 80 (2011) - [j22]Yue W. Webster, Ernst R. Dow, Jacob Koehler, Ranga Chandra Gudivada, Mathew J. Palakal:
Leveraging health social networking communities in translational research. J. Biomed. Informatics 44(4): 536-544 (2011) - [c40]Sandeep Raghuram, Yuni Xia, Jiaqi Ge, Mathew Palakal, Josette F. Jones, Dave Pecenka, Eric Tinsley, Jean Bandos, Jerry Geesaman:
AutoBayesian: Developing Bayesian Networks Based on Text Mining. DASFAA (2) 2011: 450-453 - [e3]William C. Chu, W. Eric Wong, Mathew J. Palakal, Chih-Cheng Hung:
Proceedings of the 2011 ACM Symposium on Applied Computing (SAC), TaiChung, Taiwan, March 21 - 24, 2011. ACM 2011, ISBN 978-1-4503-0113-8 [contents] - [e2]Osmar Norberto de Souza, Guilherme P. Telles, Mathew J. Palakal:
Advances in Bioinformatics and Computational Biology - 6th Brazilian Symposium on Bioinformatics, BSB 2011, Brasilia, Brazil, August 10-12, 2011. Proceedings. Lecture Notes in Computer Science 6832, Springer 2011, ISBN 978-3-642-22824-7 [contents] - 2010
- [j21]Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu:
Multi-way association extraction and visualization from biological text documents using hyper-graphs: Applications to genetic association studies for diseases. Artif. Intell. Medicine 49(3): 145-154 (2010) - [c39]Meeta Pradhan, Lakenvia Ledford, Yogesh Pandit, Mathew Palakal:
Global analysis of miRNA target genes in colon rectal cancer. BIBM 2010: 341-345 - [c38]Meeta Pradhan, Mathew Palakal:
Identifying CRC Specific Pathways and Drug Targets from Literature Augmented Proteomics Data. BIOCOMP 2010: 323-331 - [c37]Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal:
A framework for cross-disciplinary hypothesis generation. SAC 2010: 1511-1515 - [c36]Zi Ning, Ji Soo Yi, Mathew J. Palakal, Anna M. McDaniel:
OncoViz: a user-centric mining and visualization tool for cancer-related literature. SAC 2010: 1827-1828 - [e1]Sung Y. Shin, Sascha Ossowski, Michael Schumacher, Mathew J. Palakal, Chih-Cheng Hung:
Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), Sierre, Switzerland, March 22-26, 2010. ACM 2010, ISBN 978-1-60558-639-7 [contents]
2000 – 2009
- 2009
- [j20]Mathew Palakal, Pavithra G. Naidu:
An on demand data integration model for biological databases. Int. J. Data Min. Bioinform. 3(1): 40-54 (2009) - [j19]Shiaofen Fang, Basil George, Mathew Palakal:
Automatic Surface Scanning of 3D Artifacts. Int. J. Virtual Real. 8(4): 67-72 (2009) - [c35]Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal:
A Hybrid Method to Discover and Rank Cross-Disciplinary Associations. BIBM 2009: 362-365 - [c34]Steven Mannheimer, Mexhid Ferati, Donald Huckleberry, Mathew J. Palakal:
Using Audemes as a Learning Medium for the Visually Impaired. HEALTHINF 2009: 175-180 - [c33]Steven Mannheimer, Mexhid Ferati, Davide Bolchini, Mathew J. Palakal:
Educational Sound Symbols for the Visually Impaired. HCI (5) 2009: 106-115 - [c32]Sandeep Raghuram, Yuni Xia, Mathew Palakal, Josette F. Jones, Dave Pecenka, Eric Tinsley, Jean Bandos, Jerry Geesaman:
Bridging Text Mining and Bayesian Networks. NBiS 2009: 298-303 - [c31]Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa:
Comparison of Some Single-agent and Multi-agent Information Filtering Systems on a Benchmark Text Data Set. SEKE 2009: 185-188 - 2008
- [c30]Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu:
Multi-way Association Extraction from Biological Text Documents Using Hyper-Graphs. BIBM 2008: 257-262 - [c29]Shiaofen Fang, Basil George, Mathew Palakal:
Automatic Surface Scanning of 3D Artifacts. CW 2008: 335-341 - [c28]Andrew Campen, Yuni Xia, Dan Rigsby, Ying Guo, Xingdong Feng, Eric W. Su, Mathew Palakal, Shuyu Li:
Mining Gene Expression Database for Primary Human Disease Tissues. ICDE 2008: 1604-1607 - [c27]Mathew J. Palakal, William Perrizo, Kanagasabai Rajaraman:
Special track on Bioinformatics: editorial message. SAC 2008: 1260 - [c26]Anna Antony, Srilaxmi Basetty, Shielly Hartanto, Mathew J. Palakal:
Computational approach to biological validation of protein-protein interactions discovered using literature mining. SAC 2008: 1302-1306 - 2007
- [c25]Rani J. Swargam, Mathew J. Palakal:
The role of least frequent item sets in association discovery. ICDIM 2007: 217-223 - [c24]Pavithra G. Naidu, Mathew J. Palakal, Shielly Hartanto:
On-the-fly data integration models for biological databases. SAC 2007: 118-122 - 2006
- [j18]Yuan-Shun Dai, Mathew J. Palakal, Shielly Hartanto, Xiaolong Wang, Yanming Guo:
A Grid-Based Pseudo-Cache solution for MISD biomedical problems with high confidentiality and efficiency. Int. J. Bioinform. Res. Appl. 2(3): 259-281 (2006) - [c23]Mathew J. Palakal, William Perrizo:
Editorial message: special track on bioinformatics. SAC 2006: 130 - 2005
- [j17]Ramana M. Pidaparti, Mathew J. Palakal, Long Fang:
Cellular Automata Approach to Aircraft Corrosion Growth. Int. J. Artif. Intell. Tools 14(1-2): 361-369 (2005) - [j16]Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Javed Mostafa, Mathew J. Palakal:
Distributed multi-agent information filtering - A comparative study. J. Assoc. Inf. Sci. Technol. 56(8): 834-842 (2005) - [c22]Mathew J. Palakal, Sven Rahmann, Birong Liao:
Editorial message: special track on bioinformatics. SAC 2005: 99 - [c21]Niranjan Jayadevaprakash, Snehasis Mukhopadhyay, Mathew J. Palakal:
Generating association graphs of non-cooccurring text objects using transitive methods. SAC 2005: 141-145 - 2004
- [j15]Rajeev R. Raje, Daocheng Zhu, Snehasis Mukhopadhyay, Liying Tang, Mathew J. Palakal, Javed Mostafa:
COBioSIFTER - A CORBA-Based Distributed Multi-Agent Biological Information Management System. Clust. Comput. 7(4): 373-389 (2004) - [c20]Ramana Pidaparti, Mathew J. Palakal, Long Fong:
Cellular Automata Approach to Aircraft Corrosion Pit Growth. FLAIRS 2004: 93-98 - [c19]Warren T. Jones, Mathew J. Palakal, Jake Yue Chen:
Editorial message: special track on bioinformatics. SAC 2004: 101 - [c18]Kamal Kumar, Mathew J. Palakal, Snehasis Mukhopadhyay, Matthew J. Stephens, Huian Li:
BioMap: toward the development of a knowledge base of biomedical literature. SAC 2004: 121-127 - 2003
- [j14]Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal:
Simulation Studies of Different Dimensions of Users' Interests and their Impact on User Modeling and Information Filtering. Inf. Retr. 6(2): 199-223 (2003) - [j13]Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa:
Multi-agent information classification using dynamic acquaintance lists. J. Assoc. Inf. Sci. Technol. 54(10): 966-975 (2003) - [j12]Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes:
Identification of Biological Relationships from Text Documentsusing Efficient Computational Methods. J. Bioinform. Comput. Biol. 1(2): 307-342 (2003) - [j11]Snehasis Mukhopadhyay, Changhong Tang, Jeffrey Huang, Mathew J. Palakal:
Genetic Sequence Classification and its Application to Cross-Species Homology Detection. J. VLSI Signal Process. 35(3): 273-285 (2003) - [c17]Snehanis Mukhopadhyay, Mathew Palakal, Vijay Kodiripaka, Rajeev R. Raje, Javed Mostafa:
Managing information flow for complex, dynamic tasks using multi-agent collaboration. ISIC 2003: 848-853 - [c16]Warren T. Jones, Mathew J. Palakal:
Bioinformatics Track Editorial. SAC 2003: 66 - 2002
- [j10]Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa, Rajeev R. Raje, Mathias N'Cho, Santosh Mishra:
An intelligent biological information management system. Bioinform. 18(10): 1283-1288 (2002) - [j9]Rajeev R. Raje, Mingyong Qiao, Snehasis Mukhopadhyay, Mathew J. Palakal, Shengquan Peng, Javed Mostafa:
Homogeneous Agent-Based Distributed Information Filtering. Clust. Comput. 5(4): 377-388 (2002) - [c15]Jeffrey Huang, Deepa Umamaheswaran, Mathew J. Palakal:
Video Indexing and Retrieval for Archeological Digital Library, CLIOH. CIVR 2002: 289-298 - [c14]Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes:
A Multi-Level Text Mining Method to Extract Biological Relationships. CSB 2002: 97-108 - [c13]Deepa Umamaheswaran, Jeffrey Huang, Mathew J. Palakal, Suzali Suyut:
Video Scene Analysis Using Best Basis Wavelets and Learnin Strategies. JCIS 2002: 680-683 - [c12]Snehasis Mukhopadhyay, Changhong Tang, Jeffrey Huang, Mulong Yu, Mathew J. Palakal:
A comparative study of genetic sequence classification algorithms. NNSP 2002: 57-66 - [c11]Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa:
An intelligent biological information management system. SAC 2002: 159-163 - [c10]Yueyu Fu, Travis Bauer, Javed Mostafa, Mathew J. Palakal, Snehasis Mukhopadhyay:
Concept extraction and association from cancer literature. WIDM 2002: 100-103 - 2001
- [c9]Shengquan Peng, Snehasis Mukhopadhyay, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa:
A Comparison Between Single-agent and Multi-agent Classification of Documents. IPDPS 2001: 90 - [c8]Matthew J. Stephens, Mathew J. Palakal, Snehasis Mukhopadhyay, Rajeev R. Raje, Javed Mostafa:
Detecting Gene Relations from MEDLINE Abstracts. Pacific Symposium on Biocomputing 2001: 483-496
1990 – 1999
- 1998
- [j8]Javed Mostafa, Luz Marina Quiroga, Mathew J. Palakal:
Filtering Medical Documents Using Automated and Human Classification Methods. J. Am. Soc. Inf. Sci. 49(14): 1304-1318 (1998) - [j7]Y. P. Chien, Anand V. Hudli, Mathew Palakal:
Using Many-Sorted Logic in the Object-Oriented Data Model for Fast Robot Task Planning. J. Intell. Robotic Syst. 23(1): 1-25 (1998) - [j6]Michael Boyles, Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal, Artur Papiez, Nila Patel, Rajeev R. Raje:
A Bidding Mechanism for Web-Based Agents Involved in Information Classification. World Wide Web 1(3): 155-165 (1998) - [c7]Mathew J. Palakal, Frederick W. Myers, Carla L. Boyd:
An interactive learning environment for breadth-first computing science curriculum. SIGCSE 1998: 1-5 - 1997
- [j5]Javed Mostafa, Snehasis Mukhopadhyay, Wai Lam, Mathew J. Palakal:
A Multilevel Approach to Intelligent Information Filtering: Model, System, and Evaluation. ACM Trans. Inf. Syst. 15(4): 368-399 (1997) - [j4]S. Y. P. Chien, L. Q. Xue, Mathew J. Palakal:
Task planning for a mobile robot in an indoor environment using object-oriented domain information. IEEE Trans. Syst. Man Cybern. Part B 27(6): 1007-1016 (1997) - 1996
- [c6]Wai Lam, Snehasis Mukhopadhyay, Javed Mostafa, Mathew J. Palakal:
Detection of Shifts in User Interests for Personalized Information Filtering. SIGIR 1996: 317-325 - 1994
- [j3]Q. Xue, Y. P. Chien, Yuanli Feng, Mathew J. Palakal:
A Task Planner for Intelligent Mobile Robots using Subgoal Priority Information. Int. J. Artif. Intell. Tools 3(1): 1-22 (1994) - 1991
- [c5]Anand V. Hudli, Mathew J. Palakal, Michael J. Zoran:
A neural network based expert system model. ICTAI 1991: 145-149 - 1990
- [j2]Renato de Mori, Mathew J. Palakal, Piero Cosi:
Perceptual Models for Automatic Speech Recognition Systems. Adv. Comput. 31: 99-173 (1990)
1980 – 1989
- 1989
- [c4]Mathew J. Palakal, Michael J. Zoran:
Feature extraction from speech spectrograms using multi-layered network models. TAI 1989: 224-230 - 1988
- [j1]Renato De Mori, Régis Cardin, Ettore Merlo, Mathew Palakal, Jean Rouat:
A network of actions for automatic speech recognition. Speech Commun. 7(4): 337-353 (1988) - 1987
- [c3]Renato de Mori, Ettore Merlo, Mathew J. Palakal, Jean Rouat:
Use of Procedural Knowledge for Automatic Speech Recognition. IJCAI 1987: 840-843 - 1986
- [c2]Ettore Merlo, Renato De Mori, Mathew Palakal, Guy Mercier:
A continuous parameter and frequency domain based Markov model. ICASSP 1986: 1597-1600 - 1985
- [c1]Renato de Mori, Mathew J. Palakal:
On the Use of a Taxonomy of Time-Frequency Morphologies for Automatic Speech Recognition. IJCAI 1985: 877-879
Coauthor Index
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