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Rafael Ferreira da Silva

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affiliation: Oak Ridge National Laboratory, USA

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2020 – today

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2023
[i19]
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  - journals/corr/abs-2304-00019
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Rafael Ferreira da Silva, Rosa M. Badia, Venkat Bala, Debbie Bard, Peer-Timo Bremer, Ian Buckley, Silvina Caíno-Lores, Kyle Chard, Carole A. Goble, Shantenu Jha, Daniel S. Katz, Daniel Laney, Manish Parashar, Frédéric Suter, Nick Tyler, Thomas D. Uram, Ilkay Altintas, Stefan Andersson, William Arndt, Juan Aznar, Jonathan Bader, Bartosz Balis, Chris Blanton, Kelly Rosa Braghetto, Aharon Brodutch, Paul Brunk, Henri Casanova, Alba Cervera-Lierta, Justin Chigu, Tainã Coleman, Nick Collier, Iacopo Colonnelli, Frederik Coppens, Michael R. Crusoe, Will Cunningham, Bruno de Paula Kinoshita, Paolo Di Tommaso, Charles M. Doutriaux, Matthew Downton, Wael R. Elwasif, Bjoern Enders, Chris Erdmann, Thomas Fahringer, Ludmilla Figueiredo, Rosa Filgueira, Martin Foltin, Anne Fouilloux, Luiz Gadelha, Andy Gallo, Artur García-Sáez, et al.:
Workflows Community Summit 2022: A Roadmap Revolution. CoRR abs/2304.00019 (2023)
2022
[j28]
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Tainã Coleman, Henri Casanova, Loïc Pottier, Manav Kaushik, Ewa Deelman, Rafael Ferreira da Silva:
WfCommons: A framework for enabling scientific workflow research and development. Future Gener. Comput. Syst. 128: 16-27 (2022)
[c63]
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  - conf/bigdataconf/MaheshwariWMSKS22
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Ketan Maheshwari, Sean R. Wilkinson, Alex May, Tyler J. Skluzacek, Olga A. Kuchar, Rafael Ferreira da Silva:
Pseudonymization at Scale: OLCF's Summit Usage Data Case Study. Big Data 2022: 3432-3440
[c62]
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  - conf/eScience/HonoreDPSDS22
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Valentin Honoré, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Ewa Deelman, Frédéric Suter:
SIM-SITU: A Framework for the Faithful Simulation of in situ Processing. e-Science 2022: 182-191
[c61]
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Radita Liem, Connor Scully-Allison, Ana Veroneze Solorzano, Kristopher Keipert, Rafael Ferreira da Silva, Suraj P. Kesavan, Tirthak Patel:
PERMAVOST'22 Discussion Panel: Domain Scientists vs. Performance Analysis Tools: Advancing in HPC. PERMAVOST@HPDC 2022: 23-24
[c60]
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Sean R. Wilkinson, Ketan Maheshwari, Rafael Ferreira da Silva:
Unveiling User Behavior on Summit Login Nodes as a User. ICCS (1) 2022: 516-529
[c59]
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  - conf/ipps/BuckerCSLLNSWB22
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H. Martin Bücker, Henri Casanova, Rafael Ferreira da Silva, Alice Lasserre, Derrick Luyen, Raymond Namyst, Johannes Schoder, Pierre-André Wacrenier, David P. Bunde:
Peachy Parallel Assignments (EduPar 2022). IPDPS Workshops 2022: 361-368
[c58]
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Henri Casanova, Yick Ching Wong, Loïc Pottier, Rafael Ferreira da Silva:
On the Feasibility of Simulation-Driven Portfolio Scheduling for Cyberinfrastructure Runtime Systems. JSSPP 2022: 3-24
[c57]
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Tainã Coleman, Henri Casanova, Ketan Maheshwari, Loïc Pottier, Sean R. Wilkinson, Justin M. Wozniak, Frédéric Suter, Mallikarjun Shankar, Rafael Ferreira da Silva:
WfBench: Automated Generation of Scientific Workflow Benchmarks. PMBS@SC 2022: 100-111
[c56]
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  - conf/works-ws/DoPSSCTD22
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Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Frédéric Suter, Silvina Caíno-Lores, Michela Taufer, Ewa Deelman:
Co-scheduling Ensembles of In Situ Workflows. WORKS@SC 2022: 43-51
[c55]
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  - conf/works-ws/AbhinitAACDGHILLMNNPRRRSVWXSF22
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Ishan Abhinit, Emily K. Adams, Khairul Alam, Brian Chase, Ewa Deelman, Lev Gorenstein, Stephen Hudson, Tanzima Z. Islam, Jeffrey Larson, Geoffrey Lentner, Anirban Mandal, John-Luke Navarro, Bogdan Nicolae, Line Pouchard, Robert B. Ross, Banani Roy, Mats Rynge, Alexander Serebrenik, Karan Vahi, Stefan M. Wild, Yufeng Xin, Rafael Ferreira da Silva, Rosa Filgueira:
Novel Proposals for FAIR, Automated, Recommendable, and Robust Workflows. WORKS@SC 2022: 84-92
[i18]
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  - journals/corr/abs-2201-07435
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Rafael Ferreira da Silva, Kyle Chard, Henri Casanova, Dan Laney, Dong H. Ahn, Shantenu Jha, William E. Allcock, Gregory Bauer, Dmitry Duplyakin, Bjoern Enders, Todd M. Heer, Eric Lancon, Sergiu Sanielevici, Kevin Sayers:
Workflows Community Summit: Tightening the Integration between Computing Facilities and Scientific Workflows. CoRR abs/2201.07435 (2022)
[i17]
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  - journals/corr/abs-2204-08354
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Sean R. Wilkinson, Ketan Maheshwari, Rafael Ferreira da Silva:
Unveiling User Behavior on Summit Login Nodes as a User. CoRR abs/2204.08354 (2022)
[i16]
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  - journals/corr/abs-2208-09190
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Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Frédéric Suter, Silvina Caíno-Lores, Michela Taufer, Ewa Deelman:
Co-scheduling Ensembles of In Situ Workflows. CoRR abs/2208.09190 (2022)
[i15]
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  - journals/corr/abs-2210-03170
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Tainã Coleman, Henri Casanova, Ketan Maheshwari, Loïc Pottier, Sean R. Wilkinson, Justin M. Wozniak, Frédéric Suter, Mallikarjun Shankar, Rafael Ferreira da Silva:
WfBench: Automated Generation of Scientific Workflow Benchmarks. CoRR abs/2210.03170 (2022)
[i14]
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  - journals/corr/abs-2212-09616
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Ketan Maheshwari, Sean R. Wilkinson, Alex May, Tyler J. Skluzacek, Olga A. Kuchar, Rafael Ferreira da Silva:
Pseudonymization at Scale: OLCF's Summit Usage Data Case Study. CoRR abs/2212.09616 (2022)
2021
[j27]
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  - journals/fgcs/PapadimitriouWV21
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George Papadimitriou, Cong Wang, Karan Vahi, Rafael Ferreira da Silva, Anirban Mandal, Zhengchun Liu, Rajiv Mayani, Mats Rynge, Mariam Kiran, Vickie E. Lynch, Rajkumar Kettimuthu, Ewa Deelman, Jeffrey S. Vetter, Ian T. Foster:
End-to-end online performance data capture and analysis for scientific workflows. Future Gener. Comput. Syst. 117: 387-400 (2021)
[j26]
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Rafael Ferreira da Silva, Sandra Gesing, Rizos Sakellariou, Ian J. Taylor:
Special issue on workflows in support of large-scale science. Future Gener. Comput. Syst. 118: 73-74 (2021)
[j25]
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  - journals/jocs/DoPCSCWETD21
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Tu Mai Anh Do, Loïc Pottier, Silvina Caíno-Lores, Rafael Ferreira da Silva, Michel A. Cuendet, Harel Weinstein, Trilce Estrada, Michela Taufer, Ewa Deelman:
A lightweight method for evaluating in situ workflow efficiency. J. Comput. Sci. 48: 101259 (2021)
[j24]
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  - journals/jocs/DeelmanSVRMTWL21
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Ewa Deelman, Rafael Ferreira da Silva, Karan Vahi, Mats Rynge, Rajiv Mayani, Ryan Tanaka, Wendy R. Whitcup, Miron Livny:
The Pegasus workflow management system: Translational computer science in practice. J. Comput. Sci. 52: 101200 (2021)
[j23]
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  - journals/jpdc/CasanovaTKS21
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Henri Casanova, Ryan Tanaka, William Koch, Rafael Ferreira da Silva:
Teaching parallel and distributed computing concepts in simulation with WRENCH. J. Parallel Distributed Comput. 156: 53-63 (2021)
[j22]
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  - journals/tiis/GilGKKROVPPSVCF21
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Yolanda Gil, Daniel Garijo, Deborah Khider, Craig A. Knoblock, Varun Ratnakar, Maximiliano Osorio, Hernán Vargas, Minh Pham, Jay Pujara, Basel Shbita, Binh Vu, Yao-Yi Chiang, Dan Feldman, Yijun Lin, Hayley Song, Vipin Kumar, Ankush Khandelwal, Michael S. Steinbach, Kshitij Tayal, Shaoming Xu, Suzanne A. Pierce, Lissa Pearson, Daniel Hardesty-Lewis, Ewa Deelman, Rafael Ferreira da Silva, Rajiv Mayani, Armen R. Kemanian, Yuning Shi, Lorne Leonard, Scott D. Peckham, Maria Stoica, Kelly M. Cobourn, Zeya Zhang, Christopher J. Duffy, Lele Shu:
Artificial Intelligence for Modeling Complex Systems: Taming the Complexity of Expert Models to Improve Decision Making. ACM Trans. Interact. Intell. Syst. 11(2): 11:1-11:49 (2021)
[c54]
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  - conf/cluster/DoHSSCG21
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Hoang-Dung Do, Valérie Hayot-Sasson, Rafael Ferreira da Silva, Christopher Steele, Henri Casanova, Tristan Glatard:
Modeling the Linux page cache for accurate simulation of data-intensive applications. CLUSTER 2021: 398-408
[c53]
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  - conf/cluster/TauferDSEHL21
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Michela Taufer, Ewa Deelman, Rafael Ferreira da Silva, Trilce Estrada, Mary W. Hall, Miron Livny:
A Roadmap to Robust Science for High-throughput Applications: The Developers' Perspective. CLUSTER 2021: 807-808
[c52]
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  - conf/eScience/BurkatPBMVRSD21
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Krzysztof Burkat, Maciej Pawlik, Bartosz Balis, Maciej Malawski, Karan Vahi, Mats Rynge, Rafael Ferreira da Silva, Ewa Deelman:
Serverless Containers - Rising Viable Approach to Scientific Workflows. e-Science 2021: 40-49
[c51]
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  - conf/eScience/ColemanCS21
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Tainã Coleman, Henri Casanova, Rafael Ferreira da Silva:
WfChef: Automated Generation of Accurate Scientific Workflow Generators. e-Science 2021: 159-168
[c50]
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Michela Taufer, Ewa Deelman, Rafael Ferreira da Silva, Trilce Estrada, Mary W. Hall:
A Roadmap to Robust Science for High-throughput Applications: The Scientists' Perspective. e-Science 2021: 247-248
[c49]
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  - conf/eduhpc/CasanovaSGLTB21
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Henri Casanova, Rafael Ferreira da Silva, Arturo González-Escribano, Herman Li, Yuri Torres, David P. Bunde:
Peachy Parallel Assignments (EduHPC 2021). EduHPC@SC 2021: 51-57
[c48]
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Tainã Coleman, Henri Casanova, Ty Gwartney, Rafael Ferreira da Silva:
Evaluating Energy-Aware Scheduling Algorithms for I/O-Intensive Scientific Workflows. ICCS (1) 2021: 183-197
[c47]
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  - conf/icppw/DoPSCTD21
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Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Silvina Caíno-Lores, Michela Taufer, Ewa Deelman:
Assessing Resource Provisioning and Allocation of Ensembles of In Situ Workflows. ICPP Workshops 2021: 38:1-38:10
[c46]
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  - conf/jsspp/HataishiDSC21
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Evan Hataishi, Pierre-François Dutot, Rafael Ferreira da Silva, Henri Casanova:
GLUME: A Strategy for Reducing Workflow Execution Times on Batch-Scheduled Platforms. JSSPP 2021: 210-230
[c45]
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  - conf/works-ws/CasanovaDGHHKLM21
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Henri Casanova, Ewa Deelman, Sandra Gesing, Michael D. Hildreth, Stephen Hudson, William Koch, Jeffrey Larson, Mary Ann McDowell, Natalie Meyers, John-Luke Navarro, George Papadimitriou, Ryan Tanaka, Ian J. Taylor, Douglas Thain, Stefan M. Wild, Rosa Filgueira, Rafael Ferreira da Silva:
Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education. WORKS 2021: 74-80
[c44]
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Ilkay Altintas, Rosa M. Badia, Bartosz Balis, Tainã Coleman, Frederik Coppens, Frank Di Natale, Bjoern Enders, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Daniel Garijo, Carole A. Goble, Dorran Howell, Shantenu Jha, Daniel S. Katz, Daniel Laney, Ulf Leser, Maciej Malawski, Kshitij Mehta, Loïc Pottier, Jonathan Ozik, J. Luc Peterson, Lavanya Ramakrishnan, Stian Soiland-Reyes, Douglas Thain, Matthew Wolf:
A Community Roadmap for Scientific Workflows Research and Development. WORKS 2021: 81-90
[i13]
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  - journals/corr/abs-2101-01335
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Hoang-Dung Do, Valérie Hayot-Sasson, Rafael Ferreira da Silva, Christopher Steele, Henri Casanova, Tristan Glatard:
Modeling the Linux page cache for accurate simulation of data-intensive applications. CoRR abs/2101.01335 (2021)
[i12]
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  - journals/corr/abs-2103-04195
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Ewa Deelman, Anirban Mandal, Angela P. Murillo, Jarek Nabrzyski, Valerio Pascucci, Robert Ricci, Ilya Baldin, Susan Sons, Laura Christopherson, Charles Vardeman, Rafael Ferreira da Silva, Jane Wyngaard, Steve Petruzza, Mats Rynge, Karan Vahi, Wendy R. Whitcup, Josh Drake, Erik Scott:
Blueprint: Cyberinfrastructure Center of Excellence. CoRR abs/2103.04195 (2021)
[i11]
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  - journals/corr/abs-2103-09181
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Dan Laney, Dong H. Ahn, Shantenu Jha, Carole A. Goble, Lavanya Ramakrishnan, J. Luc Peterson, Bjoern Enders, Douglas Thain, Ilkay Altintas, Yadu N. Babuji, Rosa M. Badia, Vivien Bonazzi, Tainã Coleman, Michael R. Crusoe, Ewa Deelman, Frank Di Natale, Paolo Di Tommaso, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Alex Ganose, Björn A. Grüning, Daniel S. Katz, Olga A. Kuchar, Ana Kupresanin, Bertram Ludäscher, Ketan Maheshwari, Marta Mattoso, Kshitij Mehta, Todd S. Munson, Jonathan Ozik, Tom Peterka, Loic Pottier, Tim Randles, Stian Soiland-Reyes, Benjamín Tovar, Matteo Turilli, Thomas D. Uram, Karan Vahi, Michael Wilde, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Bringing the Scientific Workflows Community Together. CoRR abs/2103.09181 (2021)
[i10]
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  - journals/corr/abs-2105-00129
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Tainã Coleman, Henri Casanova, Rafael Ferreira da Silva:
WfChef: Automated Generation of Accurate Scientific Workflow Generators. CoRR abs/2105.00129 (2021)
[i9]
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  - journals/corr/abs-2105-14352
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Tainã Coleman, Henri Casanova, Loïc Pottier, Manav Kaushik, Ewa Deelman, Rafael Ferreira da Silva:
WfCommons: A Framework for Enabling Scientific Workflow Research and Development. CoRR abs/2105.14352 (2021)
[i8]
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  - journals/corr/abs-2106-05177
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Tainã Coleman, Dan Laney, Dong H. Ahn, Shantenu Jha, Dorran Howell, Stian Soiland-Reyes, Ilkay Altintas, Douglas Thain, Rosa Filgueira, Yadu N. Babuji, Rosa M. Badia, Bartosz Balis, Silvina Caíno-Lores, Scott Callaghan, Frederik Coppens, Michael R. Crusoe, Kaushik De, Frank Di Natale, Tu Mai Anh Do, Bjoern Enders, Thomas Fahringer, Anne Fouilloux, Grigori Fursin, Alban Gaignard, Alex Ganose, Daniel Garijo, Sandra Gesing, Carole A. Goble, Adil Hasan, Sebastiaan Huber, Daniel S. Katz, Ulf Leser, Douglas Lowe, Bertram Ludäscher, Ketan Maheshwari, Maciej Malawski, Rajiv Mayani, Kshitij Mehta, André Merzky, Todd S. Munson, Jonathan Ozik, Loïc Pottier, Sashko Ristov, Mehdi Roozmeh, Renan Souza, Frédéric Suter, Benjamín Tovar, Matteo Turilli, Karan Vahi, Alvaro Vidal-Torreira, Wendy R. Whitcup, Michael Wilde, Alan R. Williams, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development. CoRR abs/2106.05177 (2021)
[i7]
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  - journals/corr/abs-2110-02168
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Ilkay Altintas, Rosa M. Badia, Bartosz Balis, Tainã Coleman, Frederik Coppens, Frank Di Natale, Bjoern Enders, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Daniel Garijo, Carole A. Goble, Dorran Howell, Shantenu Jha, Daniel S. Katz, Daniel Laney, Ulf Leser, Maciej Malawski, Kshitij Mehta, Loïc Pottier, Jonathan Ozik, J. Luc Peterson, Lavanya Ramakrishnan, Stian Soiland-Reyes, Douglas Thain, Matthew Wolf:
A Community Roadmap for Scientific Workflows Research and Development. CoRR abs/2110.02168 (2021)
[i6]
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Valentin Honoré, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Ewa Deelman, Frédéric Suter:
SIM-SITU: A Framework for the Faithful Simulation of in-situ Workflows. CoRR abs/2112.15067 (2021)
2020
[j21]
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Henri Casanova, Rafael Ferreira da Silva, Ryan Tanaka, Suraj Pandey, Gautam Jethwani, William Koch, Spencer Albrecht, James Oeth, Frédéric Suter:
Developing accurate and scalable simulators of production workflow management systems with WRENCH. Future Gener. Comput. Syst. 112: 162-175 (2020)
[j20]
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Rafael Ferreira da Silva, Henri Casanova, Anne-Cécile Orgerie, Ryan Tanaka, Ewa Deelman, Frédéric Suter:
Characterizing, Modeling, and Accurately Simulating Power and Energy Consumption of I/O-intensive Scientific Workflows. J. Comput. Sci. 44: 101157 (2020)
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Loïc Pottier, Rafael Ferreira da Silva, Henri Casanova, Ewa Deelman:
Modeling the Performance of Scientific Workflow Executions on HPC Platforms with Burst Buffers. CLUSTER 2020: 92-103
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Tu Mai Anh Do, Loïc Pottier, Stephen Thomas, Rafael Ferreira da Silva, Michel A. Cuendet, Harel Weinstein, Trilce Estrada, Michela Taufer, Ewa Deelman:
A Novel Metric to Evaluate In Situ Workflows. ICCS (1) 2020: 538-553
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Henri Casanova, Rafael Ferreira da Silva, Arturo González-Escribano, William Koch, Yuri Torres, David P. Bunde:
Peachy Parallel Assignments (EduHPC 2020). EduHPC@SC 2020: 53-58
[c40]
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Joel C. Adams, Godmar Back, Piotr Bala, Michael K. Bane, Kirk W. Cameron, Henri Casanova, Margaret Ellis, Rafael Ferreira da Silva, Gautam Jethwani, William Koch, Tabitha Lee, Tongyu Zhu:
Lightning Talks of EduHPC 2020. EduHPC@SC 2020: 59-64
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Rafael Ferreira da Silva, Loïc Pottier, Tainã Coleman, Ewa Deelman, Henri Casanova:
WorkflowHub: Community Framework for Enabling Scientific Workflow Research and Development. WORKS@SC 2020: 49-56
[i5]
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Rafael Ferreira da Silva, Loïc Pottier, Tainã Coleman, Ewa Deelman, Henri Casanova:
WorkflowHub: Community Framework for Enabling Scientific Workflow Research and Development - Technical Report. CoRR abs/2009.00250 (2020)
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Krzysztof Burkat, Maciej Pawlik, Bartosz Balis, Maciej Malawski, Karan Vahi, Mats Rynge, Rafael Ferreira da Silva, Ewa Deelman:
Serverless Containers - rising viable approach to Scientific Workflows. CoRR abs/2010.11320 (2020)

2010 – 2019

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2019
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Ewa Deelman, Karan Vahi, Mats Rynge, Rajiv Mayani, Rafael Ferreira da Silva, George Papadimitriou, Miron Livny:
The Evolution of the Pegasus Workflow Management Software. Comput. Sci. Eng. 21(4): 22-36 (2019)
[j18]
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Adam Brinckman, Ewa Deelman, Sandeep Gupta, Jarek Nabrzyski, Soowang Park, Rafael Ferreira da Silva, Ian J. Taylor, Karan Vahi:
Collaborative circuit designs using the CRAFT repository. Future Gener. Comput. Syst. 94: 841-853 (2019)
[j17]
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Rafael Ferreira da Silva, Rosa Filgueira, Ewa Deelman, Erola Pairo-Castineira, Ian Michael Overton, Malcolm P. Atkinson:
Using simple PID-inspired controllers for online resilient resource management of distributed scientific workflows. Future Gener. Comput. Syst. 95: 615-628 (2019)
[j16]
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Rafael Ferreira da Silva, Scott Callaghan, Tu Mai Anh Do, George Papadimitriou, Ewa Deelman:
Measuring the impact of burst buffers on data-intensive scientific workflows. Future Gener. Comput. Syst. 101: 208-220 (2019)
[c38]
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Ryan Mitchell, Loïc Pottier, Steve Jacobs, Rafael Ferreira da Silva, Mats Rynge, Karan Vahi, Ewa Deelman:
Exploration of Workflow Management Systems Emerging Features from Users Perspectives. IEEE BigData 2019: 4537-4544
[c37]
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Rafael Ferreira da Silva, Rajiv Mayani, Yuning Shi, Armen R. Kemanian, Mats Rynge, Ewa Deelman:
Empowering Agroecosystem Modeling with HTC Scientific Workflows: The Cycles Model Use Case. IEEE BigData 2019: 4545-4552
[c36]
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Michela Taufer, Ewa Deelman, Stephen Thomas, Michael R. Wyatt II, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Harel Weinstein, Michel A. Cuendet, Trilce Estrada:
Characterizing In Situ and In Transit Analytics of Molecular Dynamics Simulations for Next-Generation Supercomputers. eScience 2019: 188-198
[c35]
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Karan Vahi, Michael Zink, Mats Rynge, George Papadimitriou, Duncan A. Brown, Rajiv Mayani, Rafael Ferreira da Silva, Ewa Deelman, Anirban Mandal, Eric Lyons:
Custom Execution Environments with Containers in Pegasus-Enabled Scientific Workflows. eScience 2019: 281-290
[c34]
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Rafael Ferreira da Silva, Henri Casanova, Ryan Tanaka, Frédéric Suter:
Bridging Concepts and Practice in eScience via Simulation-Driven Engineering. eScience 2019: 609-614
[c33]
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Rafael Ferreira da Silva, Anne-Cécile Orgerie, Henri Casanova, Ryan Tanaka, Ewa Deelman, Frédéric Suter:
Accurately Simulating Energy Consumption of I/O-Intensive Scientific Workflows. ICCS (1) 2019: 138-152
[c32]
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Daniel Garijo, Deborah Khider, Varun Ratnakar, Yolanda Gil, Ewa Deelman, Rafael Ferreira da Silva, Craig A. Knoblock, Yao-Yi Chiang, Minh Pham, Jay Pujara, Binh Vu, Dan Feldman, Rajiv Mayani, Kelly M. Cobourn, Christopher J. Duffy, Armen R. Kemanian, Lele Shu, Vipin Kumar, Ankush Khandelwal, Kshitij Tayal, Scott D. Peckham, Maria Stoica, Anna Dabrowski, Daniel Hardesty-Lewis, Suzanne A. Pierce:
An intelligent interface for integrating climate, hydrology, agriculture, and socioeconomic models. IUI Companion 2019: 111-112
[c31]
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Ryan Tanaka, Rafael Ferreira da Silva, Henri Casanova:
Teaching Parallel and Distributed Computing Concepts in Simulation with WRENCH. EduHPC@SC 2019: 1-9
[i3]
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Karan Vahi, Mats Rynge, George Papadimitriou, Duncan A. Brown, Rajiv Mayani, Rafael Ferreira da Silva, Ewa Deelman, Anirban Mandal, Eric Lyons, Michael Zink:
Custom Execution Environments with Containers in Pegasus-enabled Scientific Workflows. CoRR abs/1905.08204 (2019)
2018
[j15]
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Benjamín Tovar, Rafael Ferreira da Silva, Gideon Juve, Ewa Deelman, William E. Allcock, Douglas Thain, Miron Livny:
A Job Sizing Strategy for High-Throughput Scientific Workflows. IEEE Trans. Parallel Distributed Syst. 29(2): 240-253 (2018)
[c30]
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Rosa Filgueira, Rafael Ferreira da Silva, Ewa Deelman, Vyron Christodoulou, Amrey Krause:
IoT-Hub: New IoT Data-Platform for Virtual Research Environments. IWSG 2018
2017
[j14]
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Idafen Santana-Pérez, Rafael Ferreira da Silva, Mats Rynge, Ewa Deelman, María S. Pérez-Hernández, Óscar Corcho:
Reproducibility of execution environments in computational science using Semantics and Clouds. Future Gener. Comput. Syst. 67: 354-367 (2017)
[j13]
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Rafael Ferreira da Silva, Rosa Filgueira, Ilia Pietri, Ming Jiang, Rizos Sakellariou, Ewa Deelman:
A characterization of workflow management systems for extreme-scale applications. Future Gener. Comput. Syst. 75: 228-238 (2017)
[j12]
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Tristan Glatard, Marc-Etienne Rousseau, Sorina Camarasu-Pop, Reza Adalat, Natacha Beck, Samir Das, Rafael Ferreira da Silva, Najmeh Khalili-Mahani, Vladimir Korkhov, Pierre-Olivier Quirion, Pierre Rioux, Sílvia D. Olabarriaga, Pierre Bellec, Alan C. Evans:
Software architectures to integrate workflow engines in science gateways. Future Gener. Comput. Syst. 75: 239-255 (2017)
[j11]
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Ewa Deelman, Christopher D. Carothers, Anirban Mandal, Brian Tierney, Jeffrey S. Vetter, Ilya Baldin, Claris Castillo, Gideon Juve, Dariusz Król, Vickie E. Lynch, Benjamin Mayer, Jeremy S. Meredith, Thomas Proffen, Paul Ruth, Rafael Ferreira da Silva:
PANORAMA: An approach to performance modeling and diagnosis of extreme-scale workflows. Int. J. High Perform. Comput. Appl. 31(1): 4-18 (2017)
[c29]
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Anirban Mandal, Paul Ruth, Ilya Baldin, Rafael Ferreira da Silva, Ewa Deelman:
Toward Prioritization of Data Flows for Scientific Workflows Using Virtual Software Defined Exchanges. eScience 2017: 566-575
[c28]
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Vickie E. Lynch, Jose Borreguero Calvo, Ewa Deelman, Rafael Ferreira da Silva, Monojoy Goswami, Yawei Hui, Eric J. Lingerfelt, Jeffrey S. Vetter:
Distributed workflows for modeling experimental data. HPEC 2017: 1-5
[c27]
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Ian J. Taylor, Adam Brinckman, Ewa Deelman, Rafael Ferreira da Silva, Sandeep Gupta, Jarek Nabrzyski, Soowang Park, Karan Vahi:
Accelerating Circuit Realization via a Collaborative Gateway of Innovations. IWSG 2017
[c26]
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Rafael Ferreira da Silva, Scott Callaghan, Ewa Deelman:
On the use of burst buffers for accelerating data-intensive scientific workflows. WORKS@SC 2017: 2:1-2:9
[i2]
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Tristan Glatard, Gregory Kiar, Tristan Aumentado-Armstrong, Natacha Beck, Pierre Bellec, Rémi Bernard, Axel Bonnet, Sorina Camarasu-Pop, Frédéric Cervenansky, Samir Das, Rafael Ferreira da Silva, Guillaume Flandin, Pascal Girard, Krzysztof J. Gorgolewski, Charles R. G. Guttmann, Valérie Hayot-Sasson, Pierre-Olivier Quirion, Pierre Rioux, Marc-Etienne Rousseau, Alan C. Evans:
Boutiques: a flexible framework for automated application integration in computing platforms. CoRR abs/1711.09713 (2017)
2016
[j10]
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Ewa Deelman, Karan Vahi, Mats Rynge, Gideon Juve, Rajiv Mayani, Rafael Ferreira da Silva:
Pegasus in the Cloud: Science Automation through Workflow Technologies. IEEE Internet Comput. 20(1): 70-76 (2016)
[j9]
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Weiwei Chen, Rafael Ferreira da Silva, Ewa Deelman, Thomas Fahringer:
Dynamic and Fault-Tolerant Clustering for Scientific Workflows. IEEE Trans. Cloud Comput. 4(1): 49-62 (2016)
[c25]
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Rafael Ferreira da Silva, Ewa Deelman, Rosa Filgueira, Karan Vahi, Mats Rynge, Rajiv Mayani, Benjamin Mayer:
Automating environmental computing applications with scientific workflows. eScience 2016: 400-406
[c24]
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Dariusz Król, Jacek Kitowski, Rafael Ferreira da Silva, Gideon Juve, Karan Vahi, Mats Rynge, Ewa Deelman:
Science automation in practice: Performance data farming in workflows. ETFA 2016: 1-4
[c23]
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Dariusz Król, Rafael Ferreira da Silva, Ewa Deelman, Vickie E. Lynch:
Workflow Performance Profiles: Development and Analysis. Euro-Par Workshops 2016: 108-120
[c22]
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Stephan Schlagkamp, Rafael Ferreira da Silva, William E. Allcock, Ewa Deelman, Uwe Schwiegelshohn:
Consecutive Job Submission Behavior at Mira Supercomputer. HPDC 2016: 93-96
[c21]
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Stephan Schlagkamp, Rafael Ferreira da Silva, Ewa Deelman, Uwe Schwiegelshohn:
Understanding User Behavior: From HPC to HTC. ICCS 2016: 2241-2245
[c20]
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Stephan Schlagkamp, Matthias Hofmann, Lars Eufinger, Rafael Ferreira da Silva:
Increasing waiting time satisfaction in parallel job scheduling via a flexible MILP approach. HPCS 2016: 164-171
[c19]
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Stephan Schlagkamp, Rafael Ferreira da Silva, Johanna Renker, Gerhard Rinkenauer:
Analyzing users in parallel computing: A user-oriented study. HPCS 2016: 395-402
[c18]
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Hassan Nawaz, Gideon Juve, Rafael Ferreira da Silva, Ewa Deelman:
Performance Analysis of an I/O-Intensive Workflow Executing on Google Cloud and Amazon Web Services. IPDPS Workshops 2016: 535-544
[c17]
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Anirban Mandal, Paul Ruth, Ilya Baldin, Dariusz Król, Gideon Juve, Rajiv Mayani, Rafael Ferreira da Silva, Ewa Deelman, Jeremy S. Meredith, Jeffrey S. Vetter, Vickie E. Lynch, Benjamin Mayer, James Wynne, Mark P. Blanco, Christopher D. Carothers, Justin M. LaPre, Brian Tierney:
Toward an End-to-End Framework for Modeling, Monitoring and Anomaly Detection for Scientific Workflows. IPDPS Workshops 2016: 1370-1379
[c16]
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Rosa Filgueira, Rafael Ferreira da Silva, Amrey Krause, Ewa Deelman, Malcolm P. Atkinson:
Asterism: Pegasus and Dispel4py Hybrid Workflows for Data-Intensive Science. DataCloud@SC 2016: 1-8
[c15]
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Rafael Ferreira da Silva, Rosa Filgueira, Ewa Deelman, Erola Pairo-Castineira, Ian Michael Overton, Malcolm P. Atkinson:
Using Simple PID Controllers to Prevent and Mitigate Faults in Scientific Workflows. WORKS@SC 2016: 15-24
2015
[j8]
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Ewa Deelman, Karan Vahi, Gideon Juve, Mats Rynge, Scott Callaghan, Philip Maechling, Rajiv Mayani, Weiwei Chen, Rafael Ferreira da Silva, Miron Livny, R. Kent Wenger:
Pegasus, a workflow management system for science automation. Future Gener. Comput. Syst. 46: 17-35 (2015)
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Weiwei Chen, Rafael Ferreira da Silva, Ewa Deelman, Rizos Sakellariou:
Using imbalance metrics to optimize task clustering in scientific workflow executions. Future Gener. Comput. Syst. 46: 69-84 (2015)
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Tristan Glatard, Lindsay B. Lewis, Rafael Ferreira da Silva, Reza Adalat, Natacha Beck, Claude Lepage, Pierre Rioux, Marc-Etienne Rousseau, Tarek Sherif, Ewa Deelman, Najmeh Khalili-Mahani, Alan C. Evans:
Reproducibility of neuroimaging analyses across operating systems. Frontiers Neuroinformatics 9: 12 (2015)
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Rafael Ferreira da Silva, Gideon Juve, Mats Rynge, Ewa Deelman, Miron Livny:
Online Task Resource Consumption Prediction for Scientific Workflows. Parallel Process. Lett. 25(3): 1541003:1-1541003:25 (2015)
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Gideon Juve, Benjamín Tovar, Rafael Ferreira da Silva, Dariusz Król, Douglas Thain, Ewa Deelman, William E. Allcock, Miron Livny:
Practical Resource Monitoring for Robust High Throughput Computing. CLUSTER 2015: 650-657
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Rafael Ferreira da Silva, Mats Rynge, Gideon Juve, Igor Sfiligoi, Ewa Deelman, James Letts, Frank Würthwein, Miron Livny:
Characterizing a High Throughput Computing Workload: The Compact Muon Solenoid (CMS) Experiment at LHC. ICCS 2015: 39-48
2014
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Rafael Ferreira da Silva, Tristan Glatard, Frédéric Desprez:
Controlling fairness and task granularity in distributed, online, non-clairvoyant workflow executions. Concurr. Comput. Pract. Exp. 26(14): 2347-2366 (2014)
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Rafael Ferreira da Silva, Weiwei Chen, Gideon Juve, Karan Vahi, Ewa Deelman:
Community Resources for Enabling Research in Distributed Scientific Workflows. eScience 2014: 177-184
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Idafen Santana-Pérez, Rafael Ferreira da Silva, Mats Rynge, Ewa Deelman, María S. Pérez-Hernández, Óscar Corcho:
A Semantic-Based Approach to Attain Reproducibility of Computational Environments in Scientific Workflows: A Case Study. Euro-Par Workshops (1) 2014: 452-463
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Sudarshan Srinivasan, Gideon Juve, Rafael Ferreira da Silva, Karan Vahi, Ewa Deelman:
A cleanup algorithm for implementing storage constraints in scientific workflow executions. WORKS@SC 2014: 41-49
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Doug James, Nancy Wilkins-Diehr, Victoria Stodden, Dirk Colbry, Carlos Rosales, Mark R. Fahey, Justin Shi, Rafael Ferreira da Silva, Kyo Lee, Ralph Roskies, Laurence Loewe, Susan Lindsey, Rob Kooper, Lorena A. Barba, David H. Bailey, Jonathan M. Borwein, Óscar Corcho, Ewa Deelman, Michael C. Dietze, Benjamin Gilbert, Jan Harkes, Seth Keele, Praveen Kumar, Jong Lee, Erika Linke, Richard Marciano, Luigi Marini, Chris Mattmann, Dave Mattson, Kenton McHenry, Robert T. McLay, Sheila Miguez, Barbara S. Minsker, María S. Pérez-Hernández, Dan Ryan, Mats Rynge, Idafen Santana-Pérez, Mahadev Satyanarayanan, Gloriana St. Clair, Keith Webster, Eivind Hovig, Daniel S. Katz, Sophie Kay, Geir Kjetil Sandve, David Skinner, Gabrielle Allen, John Cazes, Kym Won Cho, Jim Fonseca, Lorraine J. Hwang, Lars Koesterke, Pragnesh Patel, Line Pouchard, Edward Seidel, Isuru Suriarachchi:
Standing Together for Reproducibility in Large-Scale Computing: Report on reproducibility@XSEDE. CoRR abs/1412.5557 (2014)
2013
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Rafael Ferreira da Silva:
A science-gateway for workflow executions : Online and non-clairvoyant self-healing of workflow executions on grids. (Auto-guérison en ligne et non clairvoyante des exécutions de chaînes de traitement sur grilles de calcul : Méthodes et évaluation dans une science-gateway pour l'imagerie médicale). Institut national des sciences appliquées de Lyon, Lyon - Villeurbanne, France, 2013
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Sorina Camarasu-Pop, Tristan Glatard, Rafael Ferreira da Silva, Pierre Gueth, David Sarrut, Hugues Benoit-Cattin:
Monte Carlo simulation on heterogeneous distributed systems: A computing framework with parallel merging and checkpointing strategies. Future Gener. Comput. Syst. 29(3): 728-738 (2013)
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Rafael Ferreira da Silva, Tristan Glatard, Frédéric Desprez:
Self-healing of workflow activity incidents on distributed computing infrastructures. Future Gener. Comput. Syst. 29(8): 2284-2294 (2013)
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Tristan Glatard, Carole Lartizien, Bernard Gibaud, Rafael Ferreira da Silva, Germain Forestier, Frederic Cervenansky, Martino Alessandrini, Hugues Benoit-Cattin, Olivier Bernard, Sorina Camarasu-Pop, Nadia Cerezo, Patrick Clarysse, Alban Gaignard, Patrick Hugonnard, Hervé Liebgott, Simon Marache, Adrien Marion, Johan Montagnat, Joachim Tabary, Denis Friboulet:
A Virtual Imaging Platform for Multi-Modality Medical Image Simulation. IEEE Trans. Medical Imaging 32(1): 110-118 (2013)
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