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2020 – today
- 2024
[j12]Sunyang Fu
, Heling Jia, Maria Vassilaki, Vipina Kuttichi Keloth, Yifang Dang, Yujia Zhou, Muskan Garg, Ronald C. Petersen, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Andrew Wen, Fang Li, Hua Xu, Cui Tao, Jungwei Fan, Hongfang Liu, Sunghwan Sohn:
FedFSA: Hybrid and federated framework for functional status ascertainment across institutions. J. Biomed. Informatics 152: 104623 (2024)- 2022
- [j11]Sunyang Fu, Maria Vassilaki, Omar A. Ibrahim, Ronald C. Petersen, Sandeep R. Pagali, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Jungwei Fan, Hongfang Liu, Sunghwan Sohn:
Quality assessment of functional status documentation in EHRs across different healthcare institutions. Frontiers Digit. Health 4 (2022) - [j10]Sunghwan Sohn, Sungrim Moon, Larry J. Prokop, Victor M. Montori, J. Wilfred Fan:
A scoping review of medical practice variation research within the informatics literature. Int. J. Medical Informatics 165: 104833 (2022) - [j9]Nansu Zong, Andrew Wen, Sungrim Moon, Sunyang Fu, Liwei Wang, Yiqing Zhao, Yue Yu, Ming Huang, Yanshan Wang, Gang Zheng, Michelle M. Mielke, James R. Cerhan, Hongfang Liu:
Computational drug repurposing based on electronic health records: a scoping review. npj Digit. Medicine 5 (2022) - [c31]Huan He, Sunyang Fu, Liwei Wang, Andrew Wen, Sijia Liu, Sungrim Moon, Kurt Miller, Hongfang Liu:
Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator. AMIA 2022 - [c30]Sungrim Moon, Liwei Wang, Xuan Chen, Nan Wang, Sheila Manemann, Nicholas B. Larson, Suzette J. Bielinski, Hongfang Liu:
Bridging the Granularity Gap in Family History Information Extracted from Clinical Narratives. AMIA 2022 - [c29]Sungrim Moon, Liwei Wang, Xuan Chen, Nan Wang, Sheila Manemann, Nicholas B. Larson, Suzette J. Bielinski, Hongfang Liu:
Mapping Family History Information from Clinical Narratives to Ontologies or Terminological Resources. AMIA 2022 - [c28]Liwei Wang, Sungrim Moon, Sicheng Zhou, Huan He, Hongfang Liu:
Annotation Enhancement of Synthetic Family History Corpus. AMIA 2022 - [c27]Sungrim Moon, Huan He, Hongfang Liu:
Sublanguage Characteristics of Clinical Documents. BIBM 2022: 3280-3286 - [c26]Sungrim Moon, Huan He, Jungwei Fan:
Effects of Information Masking in the Task-Specific Finetuning of a Transformers-Based Clinical Question-Answering Framework. ICHI 2022: 36-41 - [c25]Liwei Wang, Sunyang Fu, Andrew Wen, Xiaoyang Ruan, Huan He, Sijia Liu, Sungrim Moon, Michelle Mai, Irbaz Bin Riaz, Nan Wang, Ping Yang, Hua Xu, Jeremy L. Warner, Hongfang Liu:
Evaluation of mCODE Coverage in EHR: a Scoping Review of Cancer Natural Language Processing. ICHI 2022: 517-518 - [i3]Sungrim Moon, Huan He, Hongfang Liu, Jungwei Fan:
RxWhyQA: a clinical question-answering dataset with the challenge of multi-answer questions. CoRR abs/2201.02517 (2022) - 2021
- [c24]Sungrim Moon, Huan He, Jungwei Fan:
Development of a Clinical Question-Answering Corpus with Realistic Multi-Answer Challenges. AMIA 2021 - [c23]Sunghwan Sohn, Sungrim Moon, Larry J. Prokop, Victor M. Montori, Jungwei Fan:
A Scoping Review of Informatics Research for Clinical Practice Variation. AMIA 2021 - 2020
- [j8]Sunyang Fu, David Chen, Huan He, Sijia Liu, Sungrim Moon, Kevin J. Peterson, Feichen Shen, Liwei Wang, Yanshan Wang, Andrew Wen, Yiqing Zhao, Sunghwan Sohn, Hongfang Liu:
Clinical concept extraction: A methodology review. J. Biomed. Informatics 109: 103526 (2020) - [c22]Sungrim Moon, Jungwei Fan:
How You Ask Matters: The Effect of Paraphrastic Questions to BERT Performance on a Clinical SQuAD Dataset. ClinicalNLP@EMNLP 2020: 111-116 - [c21]Sijia Liu, Sunyang Fu, Sungrim Moon, Andrew Wen, Hongfang Liu:
Predicting Section Location of Clinical Sentences using BERT Encoder - A Pilot Study. AMIA 2020 - [c20]Mohamed Y. Elwazir, Andrew Wen, Sungrim Moon, Jungwei Fan:
A Perturbation Approach to Assessing BERT Robustness for Different Linguistic Aspects in Medical Question-Answering. AMIA 2020 - [c19]Andrew Wen, Feichen Shen, Sungrim Moon, Hongfang Liu, Jungwei Fan:
A Deep Profiling and Visualization Framework to Audit Clinical Assessment Variation. CBMS 2020: 546-551
2010 – 2019
- 2019
- [j7]Sungrim Moon, Sijia Liu, Christopher Scott, Sujith Samudrala, Mohamed M. Abidian, Jeffrey B. Geske, Peter A. Noseworthy, Jane L. Shellum, Rajeev Chaudhry, Steve Ommen, Rick Nishimura, Hongfang Liu, Adelaide M. Arruda-Olson:
Automated extraction of sudden cardiac death risk factors in hypertrophic cardiomyopathy patients by natural language processing. Int. J. Medical Informatics 128: 32-38 (2019) - [j6]Sungrim Moon, Sijia Liu, David Chen, Yanshan Wang, Douglas L. Wood, Rajeev Chaudhry, Hongfang Liu, Paul R. Kingsbury:
Salience of Medical Concepts of Inside Clinical Texts and Outside Medical Records for Referred Cardiovascular Patients. J. Heal. Informatics Res. 3(2): 200-219 (2019) - [j5]Andrew Wen, Sunyang Fu, Sungrim Moon, Mohamed El Wazir, Andrew Rosenbaum, Vinod C. Kaggal, Sijia Liu, Sunghwan Sohn, Hongfang Liu, Jungwei Fan:
Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation. npj Digit. Medicine 2 (2019) - [c18]Alisha Chaudhry, Sungrim Moon, Vinod Kaggal, Paul Wennberg, Thom Rooke, David Liedl, Christopher Scott, Ana Casanegra, Iftikhar J. Kullo, Robert McBane, Jane L. Shellum, Rick Nishimura, Rajeev Chaudhry, Hongfang Liu, Adelaide M. Arruda-Olson:
Usability Evaluation of a Clinical Decision Support Tool for Management of Peripheral Artery Disease Patients. AMIA 2019 - [c17]Sungrim Moon, Vinod Kaggal, Sunghwan Sohn, Hongfang Liu, Rajeev Chaudhry, Adelaide M. Arruda-Olson:
Adaptation of a Natural Language Processing Algorithm Following Implementation of a New Electronic Health Record. AMIA 2019 - [i2]Sunyang Fu, David Chen, Sijia Liu, Sungrim Moon, Kevin J. Peterson, Feichen Shen, Yanshan Wang, Liwei Wang, Andrew Wen, Yiqing Zhao, Sunghwan Sohn, Hongfang Liu:
Development of Clinical Concept Extraction Applications: A Methodology Review. CoRR abs/1910.11377 (2019) - [i1]Andrew Wen, Mohamed Y. Elwazir, Sungrim Moon, Jungwei Fan:
Adapting and evaluating a deep learning language model for clinical why-question answering. CoRR abs/1911.05604 (2019) - 2018
- [j4]Yanshan Wang, Liwei Wang, Majid Rastegar-Mojarad, Sungrim Moon, Feichen Shen, Naveed Afzal, Sijia Liu, Yuqun Zeng, Saeed Mehrabi, Sunghwan Sohn, Hongfang Liu:
Clinical information extraction applications: A literature review. J. Biomed. Informatics 77: 34-49 (2018) - [j3]Stephen T. Wu, Sijia Liu, Sunghwan Sohn, Sungrim Moon, Chung-Il Wi, Young J. Juhn, Hongfang Liu:
Modeling asynchronous event sequences with RNNs. J. Biomed. Informatics 83: 167-177 (2018) - [c16]Adelaide M. Arruda-Olson, Naveed Afzal, Vishnu Priya Mallipeddi, Ahmad Said, Homam Moussa Pacha, Sungrim Moon, Alisha Chaudhry, Christopher Scott, Kent Bailey, Vinod Kaggal, Gustavo Oderich, Iftikhar J. Kullo, Rick Nishimura, Rajeev Chaudhry, Hongfang Liu:
Leveraging the Electronic Health Record to Create an Automated Real-time Prognostic Tool for Peripheral Arterial Disease. AMIA 2018 - [c15]Sungrim Moon, Sijia Liu, Sujith Samudrala, Jane L. Shellum, Jeffrey B. Geske, Peter A. Noseworthy, Steve Ommen, Rajeev Chaudhry, Rick Nishimura, Hongfang Liu, Adelaide M. Arruda-Olson:
Leveraging Electronic Health Records for Identification of Features Associated with Sudden Death for Hypertrophic Cardiomyopathy Patients. AMIA 2018 - 2017
- [j2]Yukun Chen, Thomas A. Lasko, Qiaozhu Mei, Qingxia Chen, Sungrim Moon, Jingqi Wang, Ky Nguyen, Tolulola Dawodu, Trevor Cohen, Joshua C. Denny, Hua Xu:
An active learning-enabled annotation system for clinical named entity recognition. BMC Medical Informatics Decis. Mak. 17(2): 35-44 (2017) - [c14]Sungrim Moon, Donna M. Ihrke, Yuqun Zeng, Hongfang Liu:
Distinction between medical and non-medical usages of short forms in clinical narratives. AMIA 2017 - [c13]Sunghwan Sohn, Young J. Juhn, Sungrim Moon, Chung-Il Wi, Katherine S. King, Euijung Ryu, Hongfang Liu:
Bayesian Prediction of Asthma Exacerbation in Children. AMIA 2017 - [c12]Sungrim Moon, Sijia Liu, Paul R. Kingsbury, David Chen, Yanshan Wang, Feichen Shen, Rajeev Chaudhry, Hongfang Liu:
Medical concept intersection between outside medical records and consultant notes: A case study in transferred cardiovascular patients. BIBM 2017: 1495-1500 - 2016
- [c11]Sungrim Moon, Yukun Chen, Jingqi Wang, Joshua C. Denny, S. Trent Rosenbloom, Ky Nguyen, Tolulola Dawodu, Hua Xu:
Applying Active Learning to Clinical Abbreviation Disambiguation in Real Time. AMIA 2016 - [c10]Sungrim Moon, Trevor Cohen, Hua Xu:
Semantic Relatedness and Similarity between Biomedical Concepts. AMIA 2016 - [c9]Qiang Wei, Yukun Chen, Sungrim Moon, Trevor Cohen, Hua Xu:
A Study of Active Learning for Document Selection in Clinical Named Entity Recognition. AMIA 2016 - [c8]Hee-Jin Lee, Hua Xu, Jingqi Wang, Yaoyun Zhang, Sungrim Moon, Jun Xu, Yonghui Wu:
UTHealth at SemEval-2016 Task 12: an End-to-End System for Temporal Information Extraction from Clinical Notes. SemEval@NAACL-HLT 2016: 1292-1297 - 2015
- [c7]Yukun Chen, Sungrim Moon, Thomas A. Lasko, Qiaozhu Mei, Jingqi Wang, Trevor Cohen, Qingxia Chen, Joshua C. Denny, Hua Xu:
Real Time Active Learning Study for Clinical Named Entity Recognition. AMIA 2015 - 2014
- [j1]Sungrim Moon, Serguei V. S. Pakhomov, Nathan Liu, James O. Ryan, Genevieve B. Melton:
A sense inventory for clinical abbreviations and acronyms created using clinical notes and medical dictionary resources. J. Am. Medical Informatics Assoc. 21(2): 299-307 (2014) - [c6]Sungrim Moon, Yukun Chen, Jingqi Wang, Joshua C. Denny, Hua Xu:
Applying Active Learning to Word Sense Disambiguation in a Real-Time Setting. AMIA 2014 - [c5]Sungrim Moon, Trevor Cohen, Hua Xu:
A study of synonym extraction from clinical texts using semantic vector models. AMIA 2014 - 2013
- [c4]Sungrim Moon, Bjoern-Toby Berster, Hua Xu, Trevor Cohen:
Word Sense Disambiguation of Clinical Abbreviations with Hyperdimensional Computing. AMIA 2013 - [c3]Yonghui Wu, Buzhou Tang, Min Jiang, Sungrim Moon, Joshua C. Denny, Hua Xu:
Clinical Acronym/Abbreviation Normalization using a Hybrid Approach. CLEF (Working Notes) 2013 - 2012
- [c2]Sungrim Moon, Serguei V. S. Pakhomov, Genevieve B. Melton:
Automated Disambiguation of Acronyms and Abbreviations in Clinical Texts: Window and Training Size Considerations. AMIA 2012 - 2010
- [c1]Genevieve B. Melton, Sungrim Moon, Bridget T. McInnes, Serguei Pakhomov:
Automated Identification of Synonyms in Biomedical Acronym Sense Inventories. Louhi@NAACL-HLT 2010: 46-52
Coauthor Index
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