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Journal Articles
- 2011
[j9]Qian Yang, Alexander Karpikov, Derek Toomre, James S. Duncan:
3-D Reconstruction of Microtubules From Multi-Angle Total Internal Reflection Fluorescence Microscopy Using Bayesian Framework. IEEE Trans. Image Process. 20(8): 2248-2259 (2011)- 2010
- [j8]Kresimir Letinic, Rafael Sebastián
, Andrew Barthel, Derek Toomre:
Deciphering subcellular processes in live imaging datasets via dynamic probabilistic networks. Bioinform. 26(16): 2029-2036 (2010) - [j7]Ester Díaz, Guillermo Ayala, Maria Diaz-Fernandez, Liang Gong, Derek Toomre:
Automatic Detection of Large Dense-Core Vesicles in Secretory Cells and Statistical Analysis of Their Intracellular Distribution. IEEE ACM Trans. Comput. Biol. Bioinform. 7(1): 2-11 (2010) - 2008
- [j6]María Elena Díaz, Guillermo Ayala, Teresa León, Roberto Zoncu, Derek Toomre:
Analyzing Protein-Protein Spatial-Temporal Dependencies from Image Sequences Using Fuzzy Temporal Random Sets. J. Comput. Biol. 15(9): 1221-1236 (2008) - [j5]Stathis Hadjidemetriou, Derek Toomre, James S. Duncan:
Motion tracking of the outer tips of microtubules. Medical Image Anal. 12(6): 689-702 (2008) - [j4]Ester Díaz, Rafael Sebastián, Guillermo Ayala, María Elena Díaz, Roberto Zoncu, Derek Toomre, Stéphane Gasman:
Measuring Spatiotemporal Dependencies in Bivariate Temporal Random Sets with Applications to Cell Biology. IEEE Trans. Pattern Anal. Mach. Intell. 30(9): 1659-1671 (2008) - 2006
- [j3]Guillermo Ayala, Rafael Sebastián, María Elena Díaz, Ester Díaz, Roberto Zoncu, Derek Toomre:
Analysis of Spatially and Temporally Overlapping Events with Application to Image Sequences. IEEE Trans. Pattern Anal. Mach. Intell. 28(10): 1707-1712 (2006) - [j2]Rafael Sebastián, Ester Díaz, Guillermo Ayala, María Elena Díaz, Roberto Zoncu, Derek Toomre:
Studying endocytosis in space and time by means of temporal Boolean models. Pattern Recognit. 39(11): 2175-2185 (2006) - [j1]Rafael Sebastián, María Elena Díaz, Guillermo Ayala, Kresimir Letinic, José Moncho-Bogani, Derek Toomre:
Spatio-Temporal Analysis of Constitutive Exocytosis in Epithelial Cells. IEEE ACM Trans. Comput. Biol. Bioinform. 3(1): 17-32 (2006)
Conference and Workshop Papers
- 2012
- [c11]Liang Liang, Hongying Shen, Yingke Xu, Pietro De Camilli, Derek Toomre, James S. Duncan:
A Bayesian method for 3D estimation of subcellular particle features in multi-angle TIRF microscopy. ISBI 2012: 984-987 - [c10]Liang Liang, Yingke Xu, Hongying Shen, Pietro De Camilli, Derek K. Toomre, James S. Duncan:
Automatic detection of subcellular particles in fluorescence microscopy via feature clustering and bayesian analysis. MMBIA 2012: 161-166 - 2011
- [c9]Liang Liang, Hongying Shen, Pietro De Camilli, Derek Toomre, James S. Duncan:
An Expectation Maximization Based Method for Subcellular Particle Tracking Using Multi-angle TIRF Microscopy. MICCAI (1) 2011: 629-636 - 2010
- [c8]Qian Yang, Alexander Karpikov, Derek Toomre, James S. Duncan:
Estimation of 3D Geometry of Microtubules Using Multi-angle Total Internal Reflection Fluorescence Microscopy. MICCAI (2) 2010: 538-545 - 2009
- [c7]Qian Yang, Alexander Karpikov, Derek Toomre, James S. Duncan:
3-D reconstruction and measurement of microtubules from multiple angle-total internal reflection fluorescence microscopy. CVPR Workshops 2009: 172-177 - 2007
- [c6]Teresa León, Rafael Sebastián, Guillermo Ayala, María Elena Díaz, Roberto Zoncu, Derek Toomre:
Fuzzy Temporal Random Sets with an Application to Cell Biology. FUZZ-IEEE 2007: 1-6 - [c5]Rafael Sebastián, Guillermo Ayala, María Elena Díaz, Roberto Zoncu, Derek Toomre:
Estimating the Duration of Endocytic Events. ISBI 2007: 248-251 - 2006
- [c4]Rafael Sebastián, María Elena Díaz, Guillermo Ayala, Roberto Zoncu, Derek Toomre:
Analysis of spatial dependencies of endocytic proteins based on temporal random sets. EMBC 2006: 4175-4178 - [c3]Stathis Hadjidemetriou, Derek Toomre, James S. Duncan:
Tracking the motion of the outer tips of microtubules. ISBI 2006: 530-533 - 2005
- [c2]Stathis Hadjidemetriou, Derek Toomre, James S. Duncan:
Segmentation and 3D Reconstruction of Microtubules in Total Internal Reflection Fluorescence Microscopy (TIRFM). MICCAI 2005: 761-769 - 2004
- [c1]Stathis Hadjidemetriou, James S. Duncan, Derek Toomre, David Tuck:
Automatic Quantification of Microtubule Dynamics. ISBI 2004: 656-659
Coauthor Index
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