default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDEugene I. Shakhnovich
Person information
- affiliation: Harvard University, Department of Chemistry and Chemical Biology
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2020
[i1]David E. Graff, Eugene I. Shakhnovich, Connor W. Coley:
Accelerating high-throughput virtual screening through molecular pool-based active learning. CoRR abs/2012.07127 (2020)
2010 – 2019
- 2018
- [j24]Rostam M. Razban, Amy I Gilson, Niamh Durfee, Hendrik Strobelt, Kasper Dinkla, Jeong-Mo Choi
, Hanspeter Pfister, Eugene I. Shakhnovich:
ProteomeVis: a web app for exploration of protein properties from structure to sequence evolution across organisms' proteomes. Bioinform. 34(20): 3557-3565 (2018) - [j23]Rostam M. Razban, Amy I Gilson, Niamh Durfee, Hendrik Strobelt, Kasper Dinkla, Jeong-Mo Choi, Hanspeter Pfister, Eugene I. Shakhnovich:
ProteomeVis: a web app for exploration of protein properties from structure to sequence evolution across organisms' proteomes. Bioinform. 34(23): 4140 (2018) - 2017
- [j22]Nicolas Chéron, Eugene I. Shakhnovich:
Effect of sampling on BACE-1 ligands binding free energy predictions via MM-PBSA calculations. J. Comput. Chem. 38(22): 1941-1951 (2017) - [j21]Théau Debroise, Eugene I. Shakhnovich, Nicolas Chéron:
A Hybrid Knowledge-Based and Empirical Scoring Function for Protein-Ligand Interaction: SMoG2016. J. Chem. Inf. Model. 57(3): 584-593 (2017) - 2016
- [j20]Hugo Jacquin, Amy Gilson, Eugene I. Shakhnovich, Simona Cocco, Rémi Monasson:
Benchmarking Inverse Statistical Approaches for Protein Structure and Design with Exactly Solvable Models. PLoS Comput. Biol. 12(5) (2016) - 2015
- [j19]Jian Tian, Jaie C. Woodard, Anna Whitney, Eugene I. Shakhnovich:
Thermal Stabilization of Dihydrofolate Reductase Using Monte Carlo Unfolding Simulations and Its Functional Consequences. PLoS Comput. Biol. 11(4) (2015) - 2014
- [j18]Sílvia G. Estácio, Heinrich Krobath, Diogo Vila-Viçosa, Miguel Machuqueiro, Eugene I. Shakhnovich, Patrícia F. N. Faísca:
A Simulated Intermediate State for Folding and Aggregation Provides Insights into ΔN6 β2-Microglobulin Amyloidogenic Behavior. PLoS Comput. Biol. 10(5) (2014) - 2013
- [j17]Pouria Dasmeh, Adrian W. R. Serohijos, Kasper P. Kepp, Eugene I. Shakhnovich:
Positively Selected Sites in Cetacean Myoglobins Contribute to Protein Stability. PLoS Comput. Biol. 9(3) (2013) - [j16]Murat Çetinbas, Eugene I. Shakhnovich:
Catalysis of Protein Folding by Chaperones Accelerates Evolutionary Dynamics in Adapting Cell Populations. PLoS Comput. Biol. 9(11) (2013) - 2012
- [j15]C. Scott Wylie, Eugene I. Shakhnovich:
Mutation Induced Extinction in Finite Populations: Lethal Mutagenesis and Lethal Isolation. PLoS Comput. Biol. 8(8) (2012) - [j14]Ranjan V. Mannige, Charles L. Brooks III, Eugene I. Shakhnovich:
A Universal Trend among Proteomes Indicates an Oily Last Common Ancestor. PLoS Comput. Biol. 8(12) (2012) - 2010
- [j13]Muyoung Heo, Eugene I. Shakhnovich:
Interplay between Pleiotropy and Secondary Selection Determines Rise and Fall of Mutators in Stress Response. PLoS Comput. Biol. 6(3) (2010) - [j12]Jingshan Zhang, Eugene I. Shakhnovich:
Optimality of Mutation and Selection in Germinal Centers. PLoS Comput. Biol. 6(6) (2010)
2000 – 2009
- 2009
- [j11]J. William Lee, Tomasz Zemojtel, Eugene I. Shakhnovich:
Systems-Level Evidence of Transcriptional Co-Regulation of Yeast Protein Complexes. J. Comput. Biol. 16(2): 331-339 (2009) - [j10]Peter S. Kutchukian, David Lou, Eugene I. Shakhnovich:
FOG: Fragment Optimized Growth Algorithm for the de Novo Generation of Molecules Occupying Druglike Chemical Space. J. Chem. Inf. Model. 49(7): 1630-1642 (2009) - [j9]Jason E. Donald, Eugene I. Shakhnovich:
SDR: a database of predicted specificity-determining residues in proteins. Nucleic Acids Res. 37(Database-Issue): 191-194 (2009) - 2007
- [j8]Konstantin B. Zeldovich, Igor N. Berezovsky, Eugene I. Shakhnovich:
Protein and DNA Sequence Determinants of Thermophilic Adaptation. PLoS Comput. Biol. 3(1) (2007) - [j7]Igor N. Berezovsky, Konstantin B. Zeldovich, Eugene I. Shakhnovich:
Positive and Negative Design in Stability and Thermal Adaptation of Natural Proteins. PLoS Comput. Biol. 3(3) (2007) - [j6]Konstantin B. Zeldovich, Peiqiu Chen, Boris E. Shakhnovich, Eugene I. Shakhnovich:
A First-Principles Model of Early Evolution: Emergence of Gene Families, Species, and Preferred Protein Folds. PLoS Comput. Biol. 3(7) (2007) - 2006
- [j5]Marcin von Grotthuss, Dariusz Plewczynski, Krzysztof Ginalski, Leszek Rychlewski, Eugene I. Shakhnovich:
PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics. BMC Bioinform. 7: 53 (2006) - 2005
- [j4]Jason E. Donald, Isaac A. Hubner, Veronica Rotemberg, Eugene I. Shakhnovich, Leonid A. Mirny:
CoC: a database of universally conserved residues in protein folds. Bioinform. 21(10): 2539-2540 (2005) - [j3]Jason E. Donald, Eugene I. Shakhnovich:
Determining functional specificity from protein sequences. Bioinform. 21(11): 2629-2635 (2005) - [j2]Igor N. Berezovsky, William W. Chen, Paul J. Choi, Eugene I. Shakhnovich:
Entropic Stabilization of Proteins and Its Proteomic Consequences. PLoS Comput. Biol. 1(4) (2005) - 2003
- [j1]Boris E. Shakhnovich, John M. Harvey, Steve Comeau, David Lorenz, Charles DeLisi, Eugene I. Shakhnovich:
ELISA: Structure-Function Inferences based on statistically significant and evolutionarily inspired observations. BMC Bioinform. 4: 34 (2003)
1990 – 1999
- 1999
- [c2]C. Kissinger, A. Keith Dunker, Eugene I. Shakhnovich:
Disorder in Protein Structure and Function - Session Introduction. Pacific Symposium on Biocomputing 1999: 517-519 - 1995
- [c1]Andrej Sali, Eugene I. Shakhnovich, Martin Karplus:
Thermodynamics and kinetics of protein folding. Global Minimization of Nonconvex Energy Functions: Molecular Conformation and Protein Folding 1995: 199-213
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-04-25 05:54 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
