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ORCIDJiayu Shang
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2020 – today
- 2026
[j17]Jiayu Shang, Dan Huang
, Songshan (Sam) Huang:
Quality of human-GenAI collaboration and its driving factors: A symbiotic agency perspective. Inf. Process. Manag. 63(2): 104373 (2026)- 2025
- [j16]Jiayu Shang, Xiao-Jun Zeng:
Classifying infinite-dimensional data with unified basis functions: An effective machine learning approach. Neurocomputing 622: 129245 (2025) - 2024
- [j15]Jiaojiao Guan, Yongxin Ji, Cheng Peng, Wei Zou, Xubo Tang, Jiayu Shang, Yanni Sun:
GOPhage: protein function annotation for bacteriophages by integrating the genomic context. Briefings Bioinform. 26(1) (2024) - [i7]Jiaojiao Guan, Yongxin Ji, Cheng Peng, Wei Zou, Xubo Tang, Jiayu Shang, Yanni Sun:
PhaGO: Protein function annotation for bacteriophages by integrating the genomic context. CoRR abs/2408.06402 (2024) - 2023
- [j14]Jingzhe Jiang, Wen-Guang Yuan, Jiayu Shang, Ying-Hui Shi, Li-Ling Yang, Min Liu, Peng Zhu, Tao Jin, Yanni Sun, Li-Hong Yuan:
Virus classification for viral genomic fragments using PhaGCN2. Briefings Bioinform. 24(1) (2023) - [j13]Jiayu Shang, Xubo Tang, Yanni Sun:
PhaTYP: predicting the lifestyle for bacteriophages using BERT. Briefings Bioinform. 24(1) (2023) - [j12]Jiaojiao Guan, Cheng Peng, Jiayu Shang, Xubo Tang, Yanni Sun:
PhaGenus: genus-level classification of bacteriophages using a Transformer model. Briefings Bioinform. 24(6) (2023) - [j11]Yongxin Ji, Jiayu Shang, Xubo Tang, Yanni Sun:
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer. Bioinform. 39(5) (2023) - [j10]Herui Liao, Jiayu Shang, Yanni Sun:
GDmicro: classifying host disease status with GCN and deep adaptation network based on the human gut microbiome data. Bioinform. 39(12) (2023) - [j9]Jiayu Shang, Cheng Peng, Xubo Tang, Yanni Sun:
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer. Bioinform. 39(Supplement-1): 30-39 (2023) - [c2]Yuping Wu, Ching-Hsun Tseng, Jiayu Shang, Shengzhong Mao, Goran Nenadic, Xiao-Jun Zeng:
EDU-level Extractive Summarization with Varying Summary Lengths. EACL (Findings) 2023: 1610-1622 - 2022
- [j8]Xubo Tang, Jiayu Shang, Yanni Sun:
RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic data. Briefings Bioinform. 23(2) (2022) - [j7]Jiayu Shang, Xubo Tang, Ruocheng Guo, Yanni Sun:
Accurate identification of bacteriophages from metagenomic data using Transformer. Briefings Bioinform. 23(4) (2022) - [j6]Jiayu Shang, Yanni Sun:
CHERRY: a Computational metHod for accuratE pRediction of virus-pRokarYotic interactions using a graph encoder-decoder model. Briefings Bioinform. 23(5) (2022) - [j5]Dehan Cai, Jiayu Shang, Yanni Sun:
HaploDMF: viral haplotype reconstruction from long reads via deep matrix factorization. Bioinform. 38(24): 5360-5367 (2022) - [j4]Ching-Hsun Tseng, Shin-Jye Lee, Jia-Nan Feng, Shengzhong Mao, Yuping Wu, Jiayu Shang, Xiao-Jun Zeng:
UPANets: Learning from the Universal Pixel Attention Neworks. Entropy 24(9): 1243 (2022) - [i6]Jiayu Shang, Yanni Sun:
CHERRY: a Computational metHod for accuratE pRediction of virus-pRokarYotic interactions using a graph encoder-decoder model. CoRR abs/2201.01018 (2022) - [i5]Yuping Wu, Ching-Hsun Tseng, Jiayu Shang, Shengzhong Mao, Goran Nenadic, Xiao-Jun Zeng:
EDU-level Extractive Summarization with Varying Summary Lengths. CoRR abs/2210.04029 (2022) - 2021
- [j3]Jiayu Shang, Jingzhe Jiang, Yanni Sun:
Bacteriophage classification for assembled contigs using graph convolutional network. Bioinform. 37(Supplement): 25-33 (2021) - [c1]Shengzhong Mao, Ching-Hsun Tseng, Jiayu Shang, Yuping Wu, Xiao-Jun Zeng:
Construction Cost Index Prediction: A Visibility Graph Network Method. IJCNN 2021: 1-6 - [i4]Jiayu Shang, Jingzhe Jiang, Yanni Sun:
Bacteriophage classification for assembled contigs using Graph Convolutional Network. CoRR abs/2102.03746 (2021) - [i3]Ching-Hsun Tseng, Shin-Jye Lee, Jia-Nan Feng, Shengzhong Mao, Yuping Wu, Jiayu Shang, Mou-Chung Tseng, Xiao-Jun Zeng:
UPANets: Learning from the Universal Pixel Attention Networks. CoRR abs/2103.08640 (2021) - [i2]Jiayu Shang, Yanni Sun:
Detecting the hosts of bacteriophages using GCN-based semi-supervised learning. CoRR abs/2105.13570 (2021) - 2020
- [i1]Nan Du, Jiayu Shang, Yanni Sun:
ProDOMA: improve PROtein DOMAin classification for third-generation sequencing reads using deep learning. CoRR abs/2009.12591 (2020)
2010 – 2019
- 2019
- [j2]Jiao Chen, Jiayu Shang, Jianrong Wang, Yanni Sun:
A binning tool to reconstruct viral haplotypes from assembled contigs. BMC Bioinform. 20(1): 544:1-544:13 (2019) - 2018
- [j1]Shiren Li, Jiayu Shang, Zhikui Duan, Junwei Huang:
Fast detection method of quick response code based on run-length coding. IET Image Process. 12(4): 546-551 (2018)
Coauthor Index
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