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ORCIDRussell T. Shinohara
Russell Taki Shinohara – Russell Takeshi Shinohara
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2020 – today
- 2022
[j24]Junhao Wen
, Erdem Varol, Aristeidis Sotiras, Zhijian Yang, Ganesh B. Chand, Güray Erus, Haochang Shou, Ahmed Abdulkadir, Gyujoon Hwang, Dominic B. Dwyer, Alessandro Pigoni, Paola Dazzan, René S. Kahn, Hugo G. Schnack, Marcus V. Zanetti, Eva Meisenzahl, Geraldo F. Busatto, Benedicto Crespo-Facorro, Romero-Garcia Rafael, Christos Pantelis, Stephen J. Wood, Chuanjun Zhuo, Russell T. Shinohara, Yong Fan, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Nikolaos Koutsouleris, Daniel H. Wolf, Christos Davatzikos:
Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes. Medical Image Anal. 75: 102304 (2022)- [j23]Andrew A. Chen, Chongliang Luo, Yong Chen, Russell T. Shinohara, Haochang Shou:
Privacy-preserving harmonization via distributed ComBat. NeuroImage 248: 118822 (2022) - [j22]Andrew Y. Revell, Alexander B. Silva, T. Campbell Arnold, Joel M. Stein, Sandhitsu R. Das, Russell T. Shinohara, Danielle S. Bassett, Brian Litt, Kathryn A. Davis:
A framework For brain atlases: Lessons from seizure dynamics. NeuroImage 254: 118986 (2022) - [j21]Andrew A. Chen, Dhivya Srinivasan, Raymond Pomponio, Yong Fan, Ilya M. Nasrallah, Susan M. Resnick, Lori L. Beason-Held, Christos Davatzikos, Theodore D. Satterthwaite, Dani S. Bassett, Russell T. Shinohara, Haochang Shou:
Harmonizing functional connectivity reduces scanner effects in community detection. NeuroImage 256: 119198 (2022) - [j20]Sydney Covitz, Tinashe M. Tapera, Azeez Adebimpe, Aaron Alexander-Bloch, Maxwell A. Bertolero, Eric Feczko, Alexandre R. Franco, Raquel E. Gur, Ruben C. Gur, Timothy Hendrickson, Audrey Houghton, Kahini Mehta, Kristin Murtha, Anders Perrone, Tim Robert-Fitzgerald, Jenna M. Schabdach, Russell T. Shinohara, Jacob W. Vogel, Chenying Zhao, Damien A. Fair, Michael P. Milham, Matthew Cieslak, Theodore D. Satterthwaite:
Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets. NeuroImage 263: 119609 (2022) - [j19]Sara Weinstein, Simon N. Vandekar, Erica B. Baller, Danni Tu, Azeez Adebimpe, Tinashe M. Tapera, Ruben C. Gur, Raquel E. Gur, John A. Detre, Armin Raznahan, Aaron Alexander-Bloch, Theodore D. Satterthwaite, Russell T. Shinohara, Jun Young Park:
Spatially-enhanced clusterwise inference for testing and localizing intermodal correspondence. NeuroImage 264: 119712 (2022) - [i7]Francesco La Rosa, Maxence Wynen, Omar Al-Louzi, Erin S. Beck, Till Huelnhagen, Pietro Maggi, Jean-Philippe Thiran, Tobias Kober, Russell T. Shinohara, Pascal Sati, Daniel S. Reich, Cristina Granziera, Martina Absinta, Meritxell Bach Cuadra:
Cortical lesions, central vein sign, and paramagnetic rim lesions in multiple sclerosis: emerging machine learning techniques and future avenues. CoRR abs/2201.07463 (2022) - 2021
- [j18]Arkaprava Roy, Brian J. Reich, Joseph Guinness, Russell T. Shinohara, Ana-Maria Staicu:
Spatial Shrinkage Via the Product Independent Gaussian Process Prior. J. Comput. Graph. Stat. 30(4): 1068-1080 (2021) - [i6]Sarthak Pati, Ujjwal Baid, Maximilian Zenk, Brandon Edwards, Micah J. Sheller, G. Anthony Reina, Patrick Foley, Alexey Gruzdev, Jason Martin, Shadi Albarqouni, Yong Chen, Russell Taki Shinohara, Annika Reinke, David Zimmerer, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Lena Maier-Hein, Jens Kleesiek, Bjoern H. Menze, Klaus H. Maier-Hein, Spyridon Bakas:
The Federated Tumor Segmentation (FeTS) Challenge. CoRR abs/2105.05874 (2021) - [i5]Ujjwal Baid, Satyam Ghodasara, Michel Bilello, Suyash Mohan, Evan Calabrese, Errol Colak, Keyvan Farahani, Jayashree Kalpathy-Cramer, Felipe C. Kitamura, Sarthak Pati, Luciano M. Prevedello, Jeffrey D. Rudie, Chiharu Sako, Russell T. Shinohara, Timothy Bergquist, Rong Chai, James A. Eddy, Julia Elliott, Walter Reade, Thomas Schaffter, Thomas Yu, Jiaxin Zheng, BraTS Annotators, Christos Davatzikos, John Mongan, Christopher Hess, Soonmee Cha, Javier E. Villanueva-Meyer, John B. Freymann, Justin S. Kirby, Benedikt Wiestler, Priscila Crivellaro, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Bjoern H. Menze, Adam E. Flanders, Spyridon Bakas:
The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification. CoRR abs/2107.02314 (2021) - 2020
- [j17]Ari M. Fish, Ajay Nadig, Jakob Seidlitz, Paul K. Reardon, Catherine Mankiw, Cassidy L. McDermott, Jonathan D. Blumenthal, Liv S. Clasen, François Lalonde, Jason P. Lerch, M. Mallar Chakravarty, Russell T. Shinohara, Armin Raznahan:
Sex-biased trajectories of amygdalo-hippocampal morphology change over human development. NeuroImage 204 (2020) - [j16]Joaquim Radua, Eduard Vieta, Russell T. Shinohara, Peter V. Kochunov, Yann Quidé, Melissa J. Green, Cynthia S. Weickert, Thomas Weickert, Jason Bruggemann, Tilo Kircher, Igor Nenadic, Murray J. Cairns, Marc L. Seal, Ulrich Schall, Frans Henskens, Janice M. Fullerton, Bryan J. Mowry, Christos Pantelis, Julian Pineda-Zapata:
Increased power by harmonizing structural MRI site differences with the ComBat batch adjustment method in ENIGMA. NeuroImage 218: 116956 (2020) - [j15]Joanne C. Beer, Nicholas J. Tustison, Philip A. Cook, Christos Davatzikos, Yvette I. Sheline, Russell T. Shinohara, Kristin A. Linn:
Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data. NeuroImage 220: 117129 (2020) - [c10]Spyridon Bakas, Gaurav Shukla, Hamed Akbari, Güray Erus, Aristeidis Sotiras, Saima Rathore, Chiharu Sako, Sung Min Ha, Martin Rozycki, Ashish Singh, Russell T. Shinohara, Michel Bilello, Christos Davatzikos:
Integrative radiomic analysis for pre-surgical prognostic stratification of glioblastoma patients: from advanced to basic MRI protocols. Medical Imaging: Image-Guided Procedures 2020: 113151S - [i4]Jordan D. Dworkin, Kristin A. Linn, Erin G. Teich, Perry Zurn, Russell T. Shinohara, Danielle S. Bassett:
The extent and drivers of gender imbalance in neuroscience reference lists. CoRR abs/2001.01002 (2020)
2010 – 2019
- 2019
- [c9]Sarthak Pati, Ashish Singh, Saima Rathore, Aimilia Gastounioti, Mark Bergman, Phuc Ngo, Sung Min Ha, Dimitrios Bounias, James Minock, Grayson Murphy, Hongming Li, Amit Bhattarai, Adam Wolf, Patmaa Sridaran, Ratheesh Kalarot, Hamed Akbari, Aristeidis Sotiras, Siddhesh P. Thakur, Ragini Verma, Russell T. Shinohara, Paul A. Yushkevich, Yong Fan, Despina Kontos, Christos Davatzikos, Spyridon Bakas:
The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview. BrainLes@MICCAI (2) 2019: 380-394 - [c8]Huahong Zhang, Alessandra M. Valcarcel, Rohit Bakshi, Renxin Chu, Francesca Bagnato, Russell T. Shinohara, Kilian Hett, Ipek Oguz:
Multiple Sclerosis Lesion Segmentation with Tiramisu and 2.5D Stacked Slices. MICCAI (3) 2019: 338-346 - 2018
- [j14]Jean-Philippe Fortin, Nicholas C. Cullen, Yvette I. Sheline, Warren D. Taylor, Irem Aselcioglu, Philip A. Cook, Phil Adams, Crystal Cooper, Maurizio Fava, Patrick J. McGrath, Melvin G. McInnis, Mary L. Phillips, Madhukar H. Trivedi, Myrna M. Weissman, Russell T. Shinohara:
Harmonization of cortical thickness measurements across scanners and sites. NeuroImage 167: 104-120 (2018) - [j13]Adon F. G. Rosen, David R. Roalf, Kosha Ruparel, Jason Blake, Kevin Seelaus, Lakshmi P. Villa, Rastko Ciric, Philip A. Cook, Christos Davatzikos, Mark A. Elliott, Angel Garcia de La Garza, Efstathios D. Gennatas, Megan Quarmley, J. Eric Schmitt, Russell T. Shinohara, M. Dylan Tisdall, R. Cameron Craddock, Raquel E. Gur, Theodore D. Satterthwaite:
Quantitative assessment of structural image quality. NeuroImage 169: 407-418 (2018) - [j12]Aaron Alexander-Bloch, Haochang Shou, Siyuan Liu, Theodore D. Satterthwaite, David C. Glahn, Russell T. Shinohara, Simon N. Vandekar, Armin Raznahan:
On testing for spatial correspondence between maps of human brain structure and function. NeuroImage 178: 540-551 (2018) - [j11]Jordan D. Dworkin, Russell T. Shinohara, Danielle S. Bassett:
The landscape of NeuroImage-ing research. NeuroImage 183: 872-883 (2018) - [c7]Alessandra M. Valcarcel, Kristin A. Linn, Fariha Khalid, Simon N. Vandekar, Shahamat Tauhid, Theodore D. Satterthwaite, John Muschelli, Rohit Bakshi, Russell T. Shinohara:
MIMoSA: An Approach to Automatically Segment T2 Hyperintense and T1 Hypointense Lesions in Multiple Sclerosis. BrainLes@MICCAI (1) 2018: 47-56 - [i3]Jordan D. Dworkin, Russell T. Shinohara, Danielle S. Bassett:
The emergent integrated network structure of scientific research. CoRR abs/1804.06434 (2018) - [i2]Jordan D. Dworkin, Russell T. Shinohara, Danielle S. Bassett:
The landscape of NeuroImage-ing research. CoRR abs/1806.03211 (2018) - [i1]Spyridon Bakas, Mauricio Reyes, András Jakab, Stefan Bauer, Markus Rempfler, Alessandro Crimi, Russell Takeshi Shinohara, Christoph Berger, Sung Min Ha, Martin Rozycki, Marcel Prastawa, Esther Alberts, Jana Lipková, John B. Freymann, Justin S. Kirby, Michel Bilello, Hassan M. Fathallah-Shaykh, Roland Wiest, Jan Kirschke, Benedikt Wiestler, Rivka R. Colen, Aikaterini Kotrotsou, Pamela LaMontagne, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Marc-André Weber, Abhishek Mahajan, Ujjwal Baid, Dongjin Kwon, Manu Agarwal, Mahbubul Alam, Alberto Albiol, Antonio Albiol, Alex Varghese, Tran Anh Tuan, Tal Arbel, Aaron Avery, Pranjal B., Subhashis Banerjee, Thomas Batchelder, Kayhan N. Batmanghelich, Enzo Battistella, Martin Bendszus, Eze Benson, José Bernal, George Biros, Mariano Cabezas, Siddhartha Chandra, Yi-Ju Chang, et al.:
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge. CoRR abs/1811.02629 (2018) - 2017
- [j10]Rastko Ciric, Daniel H. Wolf, Jonathan D. Power, David R. Roalf, Graham L. Baum, Kosha Ruparel, Russell T. Shinohara, Mark A. Elliott, Simon B. Eickhoff, Christos Davatzikos, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett, Theodore D. Satterthwaite:
Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity. NeuroImage 154: 174-187 (2017) - [j9]Jean-Philippe Fortin, Drew Parker, Birkan Tunç, Takanori Watanabe, Mark A. Elliott, Kosha Ruparel, David R. Roalf, Theodore D. Satterthwaite, Ruben C. Gur, Raquel E. Gur, Robert T. Schultz, Ragini Verma, Russell T. Shinohara:
Harmonization of multi-site diffusion tensor imaging data. NeuroImage 161: 149-170 (2017) - [c6]Ipek Oguz, Aaron Carass, Dzung L. Pham, Snehashis Roy, Nagesh Subbana, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Jerry L. Prince:
Dice Overlap Measures for Objects of Unknown Number: Application to Lesion Segmentation. BrainLes@MICCAI 2017: 3-14 - [c5]Greg M. Fleishman, Alessandra Valcarcel, Dzung L. Pham, Snehashis Roy, Peter A. Calabresi, Paul A. Yushkevich, Russell T. Shinohara, Ipek Oguz:
Joint Intensity Fusion Image Synthesis Applied to Multiple Sclerosis Lesion Segmentation. BrainLes@MICCAI 2017: 43-54 - [c4]Mengjin Dong, Ipek Oguz, Nagesh Subbana, Peter A. Calabresi, Russell T. Shinohara, Paul A. Yushkevich:
Multiple Sclerosis Lesion Segmentation Using Joint Label Fusion. Patch-MI@MICCAI 2017: 138-145 - [c3]Baris U. Oguz, Russell T. Shinohara, Paul A. Yushkevich, Ipek Oguz:
Gradient Boosted Trees for Corrective Learning. MLMI@MICCAI 2017: 203-211 - 2016
- [j8]Kristin A. Linn, Bilwaj Gaonkar, Theodore D. Satterthwaite, Jimit Doshi, Christos Davatzikos, Russell T. Shinohara:
Control-group feature normalization for multivariate pattern analysis of structural MRI data using the support vector machine. NeuroImage 132: 157-166 (2016) - [j7]Jean-Philippe Fortin, Elizabeth M. Sweeney, John Muschelli, Ciprian M. Crainiceanu, Russell T. Shinohara:
Removing inter-subject technical variability in magnetic resonance imaging studies. NeuroImage 132: 198-212 (2016) - [j6]Simon N. Vandekar, Russell T. Shinohara, Armin Raznahan, Ryan Hopson, David R. Roalf, Kosha Ruparel, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite:
Subject-level measurement of local cortical coupling. NeuroImage 133: 88-97 (2016) - [j5]Amanda F. Mejia, Elizabeth M. Sweeney, Blake Dewey, Govind Nair, Pascal Sati, Colin Shea, Daniel S. Reich, Russell T. Shinohara:
Statistical estimation of T1 relaxation times using conventional magnetic resonance imaging. NeuroImage 133: 176-188 (2016) - [j4]Anisha Keshavan, Friedemann Paul, Mona K. Beyer, Alyssa H. Zhu, Nico Papinutto, Russell T. Shinohara, William Stern, Michael Amann, Rohit Bakshi, Antje Bischof, Alessandro Carriero, Manuel Comabella, Jason C. Crane, Sandra D'Alfonso, Philippe Demaerel, Benedicte Dubois, Massimo Filippi, Vinzenz Fleischer, Bertrand Fontaine, Laura Gaetano, An Goris, Christiane Graetz, Adriane Gröger, Sergiu Groppa, David A. Hafler, Hanne F. Harbo, Bernhard Hemmer, Kesshi Jordan, Ludwig Kappos, Gina Kirkish, Sara Llufriu, Stefano Magon, Filippo Martinelli-Boneschi, Jacob L. McCauley, Xavier Montalban, Mark Mühlau, Daniel Pelletier, Pradip M. Pattany, Margaret A. Pericak-Vance, Isabelle Cournu-Rebeix, Maria Assunta Rocca, Alex Rovira, Regina Schlaeger, Albert Saiz, Till Sprenger, Alessandro Stecco, Bernard M. J. Uitdehaag, Pablo Villoslada, Mike P. Wattjes, Howard L. Weiner, Jens Wuerfel, Claus Zimmer, Frauke Zipp, Stephen L. Hauser, Jorge R. Oksenberg, Roland G. Henry:
Power estimation for non-standardized multisite studies. NeuroImage 134: 281-294 (2016) - [j3]Ke Zeng, Güray Erus, Aristeidis Sotiras, Russell T. Shinohara, Christos Davatzikos:
Abnormality Detection via Iterative Deformable Registration and Basis-Pursuit Decomposition. IEEE Trans. Medical Imaging 35(8): 1937-1951 (2016) - 2015
- [j2]Bilwaj Gaonkar, Russell T. Shinohara, Christos Davatzikos:
Interpreting support vector machine models for multivariate group wise analysis in neuroimaging. Medical Image Anal. 24(1): 190-204 (2015) - 2014
- [c2]Dongjin Kwon, Russell T. Shinohara, Hamed Akbari, Christos Davatzikos:
Combining Generative Models for Multifocal Glioma Segmentation and Registration. MICCAI (1) 2014: 763-770 - 2013
- [c1]Russell T. Shinohara, Ciprian S. Crainiceanu, Brian S. Caffo, Daniel S. Reich:
Information Criteria for Dynamic Contrast-Enhanced Magnetic Resonance Imaging. PRNI 2013: 37-41 - 2011
- [j1]Russell T. Shinohara, Ciprian M. Crainiceanu, Brian S. Caffo, María Inés Gaitán, Daniel S. Reich:
Population-wide principal component-based quantification of blood-brain-barrier dynamics in multiple sclerosis. NeuroImage 57(4): 1430-1446 (2011)
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