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2020 – today
- 2020
[j22]Fearghal O'Donncha
, Roman Iakymchuk, Albert Akhriev, Philipp Gschwandtner, Peter Thoman, Thomas Heller, Xavier Aguilar, Kiril Dichev, Charles Gillan, Stefano Markidis, Erwin Laure, Emanuele Ragnoli, Vassilis Vassiliadis, Michael Johnston, Herbert Jordan, Thomas Fahringer:
AllScale toolchain pilot applications: PDE based solvers using a parallel development environment. Comput. Phys. Commun. 251: 107089 (2020)- [c38]Steven Wei Der Chien, Artur Podobas, Ivy Bo Peng, Stefano Markidis:
tf-Darshan: Understanding Fine-grained I/O Performance in Machine Learning Workloads. CLUSTER 2020: 359-370 - [c37]Steven Wei Der Chien, Jonas Nylund, Gabriel Bengtsson, Ivy Bo Peng, Artur Podobas, Stefano Markidis:
sputniPIC: An Implicit Particle-in-Cell Code for Multi-GPU Systems. SBAC-PAD 2020: 149-156 - [i24]Martin Karp, Niclas Jansson, Artur Podobas, Philipp Schlatter, Stefano Markidis:
Optimization of Tensor-product Operations in Nekbone on GPUs. CoRR abs/2005.13425 (2020) - [i23]Steven Wei Der Chien, Artur Podobas, Ivy Bo Peng, Stefano Markidis:
tf-Darshan: Understanding Fine-grained I/O Performance in Machine Learning Workloads. CoRR abs/2008.04395 (2020) - [i22]Steven Wei Der Chien, Jonas Nylund, Gabriel Bengtsson, Ivy Bo Peng, Artur Podobas, Stefano Markidis:
sputniPIC: an Implicit Particle-in-Cell Code for Multi-GPU Systems. CoRR abs/2008.04397 (2020) - [i21]Stefano Markidis, Ivy Bo Peng, Artur Podobas, Itthinat Jongsuebchoke, Gabriel Bengtsson, Pawel Herman:
Automatic Particle Trajectory Classification in Plasma Simulations. CoRR abs/2010.05348 (2020) - [i20]Martin Karp, Artur Podobas, Niclas Jansson, Tobias Kenter, Christian Plessl, Philipp Schlatter, Stefano Markidis:
High-Performance Spectral Element Methods on Field-Programmable Gate Arrays. CoRR abs/2010.13463 (2020)
2010 – 2019
- 2019
- [j21]Marcus Wallden, Stefano Markidis, Masao Okita, Fumihiko Ino:
Memory Efficient Load Balancing for Distributed Large-Scale Volume Rendering Using a Two-Layered Group Structure. IEICE Trans. Inf. Syst. 102-D(12): 2306-2316 (2019) - [j20]Christian Simmendinger, Roman Iakymchuk, Luis Cebamanos, Dana Akhmetova, Valeria Bartsch, Tiberiu Rotaru, Mirko Rahn, Erwin Laure, Stefano Markidis:
Interoperability strategies for GASPI and MPI in large-scale scientific applications. Int. J. High Perform. Comput. Appl. 33(3) (2019) - [j19]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Stefano Markidis, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Dirk Pleiter, Shaun De Witt:
SAGE: Percipient Storage for Exascale Data Centric Computing. Parallel Comput. 83: 22-33 (2019) - [c36]Ivy Bo Peng, Jeffrey S. Vetter, Shirley Moore, Joydeep Rakshit, Stefano Markidis:
Analyzing the suitability of contemporary 3D-stacked PIM architectures for HPC scientific applications. CF 2019: 256-262 - [c35]Sergio Rivas-Gomez, Alessandro Fanfarillo, Sébastien Valat, Christophe Laferriere, Philippe Couvee, Sai Narasimhamurthy, Stefano Markidis:
uMMAP-IO: User-Level Memory-Mapped I/O for HPC. HiPC 2019: 363-372 - [c34]Chaitanya Prasad Sishtla, Steven Wei Der Chien, Vyacheslav Olshevsky, Erwin Laure, Stefano Markidis:
Multi-GPU Acceleration of the iPIC3D Implicit Particle-in-Cell Code. ICCS (5) 2019: 612-618 - [c33]Steven Wei Der Chien, Stefano Markidis, Vyacheslav Olshevsky, Yaroslav Bulatov, Erwin Laure, Jeffrey S. Vetter:
TensorFlow Doing HPC. IPDPS Workshops 2019: 509-518 - [c32]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Posit NPB: Assessing the Precision Improvement in HPC Scientific Applications. PPAM (1) 2019: 301-310 - [c31]Sergio Rivas-Gomez, Alessandro Fanfarillo, Sai Narasimhamurthy, Stefano Markidis:
Persistent coarrays: integrating MPI storage windows in coarray fortran. EuroMPI 2019: 3:1-3:8 - [c30]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Performance Evaluation of Advanced Features in CUDA Unified Memory. MCHPC@SC 2019: 50-57 - [i19]Steven Wei Der Chien, Stefano Markidis, Vyacheslav Olshevsky, Yaroslav Bulatov, Erwin Laure, Jeffrey S. Vetter:
TensorFlow Doing HPC. CoRR abs/1903.04364 (2019) - [i18]Chaitanya Prasad Sishtla, Steven Wei Der Chien, Vyacheslav Olshevsky, Erwin Laure, Stefano Markidis:
Multi-GPU Acceleration of the iPIC3D Implicit Particle-in-Cell Code. CoRR abs/1904.03684 (2019) - [i17]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Posit NPB: Assessing the Precision Improvement in HPC Scientific Applications. CoRR abs/1907.05917 (2019) - [i16]Vyacheslav Olshevsky, Yuri V. Khotyaintsev, Andrey Divin, Gian Luca Delzanno, Sven Anderzen, Pawel Herman, Steven Wei Der Chien, Levon Avanov, Stefano Markidis:
Automated classification of plasma regions using 3D particle energy distribution. CoRR abs/1908.05715 (2019) - [i15]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Performance Evaluation of Advanced Features in CUDA Unified Memory. CoRR abs/1910.09598 (2019) - 2018
- [j18]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Jeffrey S. Vetter, Pietro Cicotti, Erwin Laure, Stefano Markidis:
Characterizing the performance benefit of hybrid memory system for HPC applications. Parallel Comput. 76: 57-69 (2018) - [j17]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng, Gokcen Kestor, Sai Narasimhamurthy, Erwin Laure, Stefano Markidis:
MPI windows on storage for HPC applications. Parallel Comput. 77: 38-56 (2018) - [j16]Peter Thoman, Kiril Dichev, Thomas Heller, Roman Iakymchuk, Xavier Aguilar, Khalid Hasanov, Philipp Gschwandtner, Pierre Lemarinier, Stefano Markidis, Herbert Jordan, Thomas Fahringer, Kostas Katrinis, Erwin Laure, Dimitrios S. Nikolopoulos:
A taxonomy of task-based parallel programming technologies for high-performance computing. J. Supercomput. 74(4): 1422-1434 (2018) - [c29]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Steven Wei Der Chien, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Shaun De Witt, Dirk Pleiter, Stefano Markidis:
The SAGE project: a storage centric approach for exascale computing: invited paper. CF 2018: 287-292 - [c28]Sergio Rivas-Gomez, Stefano Markidis, Erwin Laure, Keeran Brabazon, Oliver Perks, Sai Narasimhamurthy:
Decoupled Strategy for Imbalanced Workloads in MapReduce Frameworks. HPCC/SmartCity/DSS 2018: 921-927 - [c27]Stefano Markidis, Steven Wei Der Chien, Erwin Laure, Ivy Bo Peng, Jeffrey S. Vetter:
NVIDIA Tensor Core Programmability, Performance & Precision. IPDPS Workshops 2018: 522-531 - [c26]Sergio Rivas-Gomez, Antonio J. Peña, David Moloney, Erwin Laure, Stefano Markidis:
Exploring the Vision Processing Unit as Co-Processor for Inference. IPDPS Workshops 2018: 589-598 - [c25]Muhammed Abdullah Al Ahad, Christian Simmendinger, Roman Iakymchuk, Erwin Laure, Stefano Markidis:
Efficient Algorithms for Collective Operations with Notified Communication in Shared Windows. PAW-ATM@SC 2018: 1-10 - [c24]Steven Wei Der Chien, Stefano Markidis, Chaitanya Prasad Sishtla, Luís Santos, Pawel Herman, Sai Narasimhamurthy, Erwin Laure:
Characterizing Deep-Learning I/O Workloads in TensorFlow. PDSW-DISCS@SC 2018: 54-63 - [c23]Steven Wei Der Chien, Stefano Markidis, Rami Karim, Erwin Laure, Sai Narasimhamurthy:
Exploring Scientific Application Performance Using Large Scale Object Storage. ISC Workshops 2018: 117-130 - [i14]Stefano Markidis, Steven Wei Der Chien, Erwin Laure, Ivy Bo Peng, Jeffrey S. Vetter:
NVIDIA Tensor Core Programmability, Performance & Precision. CoRR abs/1803.04014 (2018) - [i13]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Stefano Markidis, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Dirk Pleiter, Shaun De Witt:
SAGE: Percipient Storage for Exascale Data Centric Computing. CoRR abs/1805.00556 (2018) - [i12]Steven Wei Der Chien, Stefano Markidis, Rami Karim, Erwin Laure, Sai Narasimhamurthy:
Exploring Scientific Application Performance Using Large Scale Object Storage. CoRR abs/1807.02562 (2018) - [i11]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Steven Wei Der Chien, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Shaun De Witt, Dirk Pleiter, Stefano Markidis:
The SAGE Project: a Storage Centric Approach for Exascale Computing. CoRR abs/1807.03632 (2018) - [i10]Steven Wei Der Chien, Stefano Markidis, Chaitanya Prasad Sishtla, Luís Santos, Pawel Herman, Sai Narasimhamurthy, Erwin Laure:
Characterizing Deep-Learning I/O Workloads in TensorFlow. CoRR abs/1810.03035 (2018) - [i9]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng, Gokcen Kestor, Sai Narasimhamurthy, Erwin Laure, Stefano Markidis:
MPI Windows on Storage for HPC Applications. CoRR abs/1810.04110 (2018) - [i8]Sergio Rivas-Gomez, Sai Narasimhamurthy, Keeran Brabazon, Oliver Perks, Erwin Laure, Stefano Markidis:
Decoupled Strategy for Imbalanced Workloads in MapReduce Frameworks. CoRR abs/1810.04146 (2018) - [i7]Sergio Rivas-Gomez, Antonio J. Peña, David Moloney, Erwin Laure, Stefano Markidis:
Exploring the Vision Processing Unit as Co-processor for Inference. CoRR abs/1810.04150 (2018) - 2017
- [j15]Maria Elena Innocenti, Alec Johnson, Stefano Markidis, Jorge Amaya, Jan Deca, Vyacheslav Olshevsky, Giovanni Lapenta:
Progress towards physics-based space weather forecasting with exascale computing. Adv. Eng. Softw. 111: 3-17 (2017) - [c22]Sergio Rivas-Gomez, Stefano Markidis, Ivy Bo Peng, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Extending Message Passing Interface Windows to Storage. CCGrid 2017: 727-730 - [c21]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Erwin Laure, Stefano Markidis:
Preparing HPC Applications for the Exascale Era: A Decoupling Strategy. ICPP 2017: 1-10 - [c20]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Pietro Cicotti, Erwin Laure, Stefano Markidis:
Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. IPDPS Workshops 2017: 683-692 - [c19]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Pietro Cicotti, Erwin Laure, Stefano Markidis:
RTHMS: a tool for data placement on hybrid memory system. ISMM 2017: 82-91 - [c18]Peter Thoman, Khalid Hasanov, Kiril Dichev, Roman Iakymchuk, Xavier Aguilar, Philipp Gschwandtner, Pierre Lemarinier, Stefano Markidis, Herbert Jordan, Erwin Laure, Kostas Katrinis, Dimitrios S. Nikolopoulos, Thomas Fahringer:
A Taxonomy of Task-Based Technologies for High-Performance Computing. PPAM (2) 2017: 264-274 - [c17]Dana Akhmetova, Luis Cebamanos, Roman Iakymchuk, Tiberiu Rotaru, Mirko Rahn, Stefano Markidis, Erwin Laure, Valeria Bartsch, Christian Simmendinger:
Interoperability of GASPI and MPI in Large Scale Scientific Applications. PPAM (2) 2017: 277-287 - [c16]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng, Gokcen Kestor, Sai Narasimhamurthy, Erwin Laure, Stefano Markidis:
MPI windows on storage for HPC applications. EuroMPI/USA 2017: 15:1-15:11 - [i6]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Exploring Application Performance on Emerging Hybrid-Memory Supercomputers. CoRR abs/1704.08239 (2017) - [i5]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Idle Period Propagation in Message-Passing Applications. CoRR abs/1704.08244 (2017) - [i4]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Erwin Laure, Stefano Markidis:
Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. CoRR abs/1704.08273 (2017) - [i3]Sergio Rivas-Gomez, Stefano Markidis, Ivy Bo Peng, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Extending Message Passing Interface Windows to Storage. CoRR abs/1704.08492 (2017) - [i2]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Erwin Laure, Stefano Markidis:
Preparing HPC Applications for the Exascale Era: A Decoupling Strategy. CoRR abs/1708.01304 (2017) - [i1]Ivy Bo Peng, Stefano Markidis, Roberto Gioiosa, Gokcen Kestor, Erwin Laure:
MPI Streams for HPC Applications. CoRR abs/1708.01306 (2017) - 2016
- [j14]Maria Elena Innocenti, A. Beck, Stefano Markidis, Giovanni Lapenta:
Momentum conservation in Multi-Level Multi-Domain (MLMD) simulations. J. Comput. Phys. 312: 14-18 (2016) - [j13]Gianmarco Manzini, Gian Luca Delzanno, Juris Vencels, Stefano Markidis:
A Legendre-Fourier spectral method with exact conservation laws for the Vlasov-Poisson system. J. Comput. Phys. 317: 82-107 (2016) - [j12]Jing Gong, Stefano Markidis, Erwin Laure, Matthew Otten, Paul F. Fischer, Misun Min:
Nekbone performance on GPUs with OpenACC and CUDA Fortran implementations. J. Supercomput. 72(11): 4160-4180 (2016) - [c15]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Exploring Application Performance on Emerging Hybrid-Memory Supercomputers. HPCC/SmartCity/DSS 2016: 473-480 - [c14]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Idle Period Propagation in Message-Passing Applications. HPCC/SmartCity/DSS 2016: 937-944 - [c13]Stefano Markidis, Ivy Bo Peng, Roman Iakymchuk, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
A Performance Characterization of Streaming Computing on Supercomputers. ICCS 2016: 98-107 - [c12]Stefano Markidis, Ivy Bo Peng, Jesper Larsson Träff, Antoine Rougier, Valeria Bartsch, Rui Machado, Mirko Rahn, Alistair Hart, Daniel J. Holmes, Mark Bull, Erwin Laure:
The EPiGRAM Project: Preparing Parallel Programming Models for Exascale. ISC Workshops 2016: 56-68 - 2015
- [j11]A. Vapirev, Jan Deca, Giovanni Lapenta, Stefano Markidis, Ibrahim Hur, Jean-Luc Cambier:
Initial results on computational performance of Intel many integrated core, sandy bridge, and graphical processing unit architectures: implementation of a 1D c++/OpenMP electrostatic particle-in-cell code. Concurr. Comput. Pract. Exp. 27(3): 581-593 (2015) - [j10]Maria Elena Innocenti, A. Beck, T. Ponweiser, Stefano Markidis, Giovanni Lapenta:
Introduction of temporal sub-stepping in the Multi-Level Multi-Domain semi-implicit Particle-In-Cell code Parsek2D-MLMD. Comput. Phys. Commun. 189: 47-59 (2015) - [j9]Stefano Markidis, Jing Gong, Michael Schliephake, Erwin Laure, Alistair Hart, David Henty, Katherine Heisey, Paul F. Fischer:
OpenACC acceleration of the Nek5000 spectral element code. Int. J. High Perform. Comput. Appl. 29(3): 311-319 (2015) - [c11]Ivy Bo Peng, Stefano Markidis, Erwin Laure:
The Cost of Synchronizing Imbalanced Processes in Message Passing Systems. CLUSTER 2015: 408-417 - [c10]Dana Akhmetova, Gokcen Kestor, Roberto Gioiosa, Stefano Markidis, Erwin Laure:
On the Application Task Granularity and the Interplay with the Scheduling Overhead in Many-Core Shared Memory Systems. CLUSTER 2015: 428-437 - [c9]Ilya Ivanov, Jing Gong, Dana Akhmetova, Ivy Bo Peng, Stefano Markidis, Erwin Laure, Rui Machado, Mirko Rahn, Valeria Bartsch, Alistair Hart, Paul F. Fischer:
Evaluation of Parallel Communication Models in Nekbone, a Nek5000 Mini-Application. CLUSTER 2015: 760-767 - [c8]Juris Vencels, Gian Luca Delzanno, Alec Johnson, Ivy Bo Peng, Erwin Laure, Stefano Markidis:
Spectral Solver for Multi-scale Plasma Physics Simulations with Dynamically Adaptive Number of Moments. ICCS 2015: 1148-1157 - [c7]Ivy Bo Peng, Stefano Markidis, Andris Vaivads, Juris Vencels, Jorge Amaya, Andrey Divin, Erwin Laure, Giovanni Lapenta:
The Formation of a Magnetosphere with Implicit Particle-in-Cell Simulations. ICCS 2015: 1178-1187 - [c6]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Daniel J. Holmes, Mark Bull:
A data streaming model in MPI. ExaMPI@SC 2015: 2:1-2:10 - [e1]Stefano Markidis, Erwin Laure:
Solving Software Challenges for Exascale - International Conference on Exascale Applications and Software, EASC 2014, Stockholm, Sweden, April 2-3, 2014, Revised Selected Papers. Lecture Notes in Computer Science 8759, Springer 2015, ISBN 978-3-319-15975-1 [contents] - 2014
- [j8]Lars K. S. Daldorff, Gábor Tóth, Tamas I. Gombosi, Giovanni Lapenta, Jorge Amaya, Stefano Markidis, Jeremiah U. Brackbill:
Two-way coupling of a global Hall magnetohydrodynamics model with a local implicit particle-in-cell model. J. Comput. Phys. 268: 236-254 (2014) - [j7]Stefano Markidis, Pierre Henri, Giovanni Lapenta, Kjell Rönnmark, Maria Hamrin, Zakaria Meliani, Erwin Laure:
The Fluid-Kinetic Particle-in-Cell method for plasma simulations. J. Comput. Phys. 271: 415-429 (2014) - [j6]A. Beck, Maria Elena Innocenti, Giovanni Lapenta, Stefano Markidis:
Multi-level multi-domain algorithm implementation for two-dimensional multiscale particle in cell simulations. J. Comput. Phys. 271: 430-443 (2014) - [c5]Jing Gong, Stefano Markidis, Michael Schliephake, Erwin Laure, Dan S. Henningson, Philipp Schlatter, Adam Peplinski, Alistair Hart, Jens Doleschal, David Henty, Paul F. Fischer:
Nek5000 with OpenACC. EASC 2014: 57-68 - 2013
- [j5]Giovanni Lapenta, Stefano Markidis, Stefaan Poedts, Dean Vucinic:
Space Weather Prediction and Exascale Computing. Comput. Sci. Eng. 15(5): 68-76 (2013) - [j4]Maria Elena Innocenti, Giovanni Lapenta, Stefano Markidis, A. Beck, A. Vapirev:
A Multi Level Multi Domain Method for Particle In Cell plasma simulations. J. Comput. Phys. 238: 115-140 (2013) - [c4]Pawan Kumar, Stefano Markidis, Giovanni Lapenta, Karl Meerbergen, Dirk Roose:
High Performance Solvers for Implicit Particle in Cell Simulation. ICCS 2013: 2251-2258 - 2011
- [j3]Stefano Markidis, Giovanni Lapenta:
The energy conserving particle-in-cell method. J. Comput. Phys. 230(18): 7037-7052 (2011) - 2010
- [j2]Stefano Markidis, Giovanni Lapenta, Rizwan Uddin:
Multi-scale simulations of plasma with iPIC3D. Math. Comput. Simul. 80(7): 1509-1519 (2010) - [c3]Stefano Markidis, Giovanni Lapenta:
Development and performance analysis of a UPC Particle-in-Cell code. PGAS 2010: 10
2000 – 2009
- 2005
- [j1]Stefano Markidis, Giovanni Lapenta, W. B. VanderHeyden, Zoran Budimlic:
Implementation and performance of a particle-in-cell code written in Java. Concurr. Pract. Exp. 17(7-8): 821-837 (2005) - [c2]Giovanni Lapenta, Stefano Markidis:
Plug and Play Approach to Validation of Particle-Based Algorithms. International Conference on Computational Science (3) 2005: 88-95 - 2002
- [c1]Stefano Markidis, Giovanni Lapenta, W. B. VanderHeyden:
Parsek: object oriented particle in cell. implementation and performance issues. Java Grande 2002: 141-147
Coauthor Index
[j22] [j20] [j19] [c34] [c33] [i19] [i18] [j18] [j17] [j16] [c29] [c28] [c27] [c26] [c25] [c24] [c23] [i14] [i13] [i12] [i11] [i10] [i9] [i8] [i7] [c22] [c21] [c20] [c19] [c18] [c17] [c16] [i6] [i5] [i4] [i3] [i2] [i1] [j12] [c15] [c14] [c13] [c12] [j9] [c11] [c10] [c9] [c8] [c7] [c6] [e1] [j7] [c5]
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