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2020 – today
- 2024
[c8]Takuya Kihara, Andreas Keller, Takumi Ogawa, Mehran Armand, Alejandro Martin-Gomez:
Evaluating the Feasibility of Using Augmented Reality for Tooth Preparation. VR Workshops 2024: 689-690- 2023
- [j54]Ernesto Aparicio-Puerta
, Pascal Hirsch, Georges Pierre Schmartz, Tobias Fehlmann, Verena Keller, Annika Engel, Fabian Kern, Michael Hackenberg, Andreas Keller:
isomiRdb: microRNA expression at isoform resolution. Nucleic Acids Res. 51(D1): 179-185 (2023) - [j53]Ernesto Aparicio-Puerta, Pascal Hirsch, Georges Pierre Schmartz, Fabian Kern, Tobias Fehlmann, Andreas Keller:
miEAA 2023: updates, new functional microRNA sets and improved enrichment visualizations. Nucleic Acids Res. 51(W1): 319-325 (2023) - [c7]Xiaorui Zhang, Andreas Keller, Mehran Armand, Alejandro Martin-Gomez:
Feasibility Study of Using Augmented Mirrors for Alignment Task during Orthopaedic Procedures in Mixed Reality. ISMAR-Adjunct 2023: 650-651 - 2022
- [j52]Anouck Becker, Georges Pierre Schmartz, Laura Gröger, Nadja Liddy Grammes, Valentina Galata, Hannah Philippeit, Jacqueline Weiland, Nicole Ludwig, Eckart Meese, Sascha Tierling, Jörn Walter, Andreas Schwiertz, Jörg Spiegel, Gudrun Wagenpfeil, Klaus Faßbender, Andreas Keller, Marcus M. Unger:
Effects of Resistant Starch on Symptoms, Fecal Markers, and Gut Microbiota in Parkinson's Disease - The RESISTA-PD Trial. Genom. Proteom. Bioinform. 20(2): 274-287 (2022) - [j51]Jacqueline Rehner, Georges Pierre Schmartz, Laura Groeger, Jan Dastbaz, Nicole Ludwig, Matthias Hannig, Stefan Rupf, Berthold Seitz, Elias Flockerzi, Tim Berger, Matthias Christian Reichert, Marcin Krawczyk, Eckart Meese, Christian Herr, Robert Bals, Sören L. Becker, Andreas Keller, Rolf Müller:
Systematic Cross-biospecimen Evaluation of DNA Extraction Kits for Long- and Short-read Multi-metagenomic Sequencing Studies. Genom. Proteom. Bioinform. 20(2): 405-417 (2022) - [j50]Andreas Keller, Laura Gröger, Thomas Tschernig, Jeffrey Solomon, Omar Laham, Nicholas Schaum, Viktoria Wagner, Fabian Kern, Georges Pierre Schmartz, Yongping Li, Adam Borcherding, Carola Meier, Tony Wyss-Coray, Eckart Meese, Tobias Fehlmann, Nicole Ludwig:
miRNATissueAtlas2: an update to the human miRNA tissue atlas. Nucleic Acids Res. 50(D1): 211-221 (2022) - [j49]Georges Pierre Schmartz, Anna Hartung, Pascal Hirsch, Fabian Kern, Tobias Fehlmann, Rolf Müller, Andreas Keller:
PLSDB: advancing a comprehensive database of bacterial plasmids. Nucleic Acids Res. 50(D1): 273-278 (2022) - [j48]Georges Pierre Schmartz, Pascal Hirsch, Jérémy Amand, Jan Dastbaz, Tobias Fehlmann, Fabian Kern, Rolf Müller, Andreas Keller:
BusyBee Web: towards comprehensive and differential composition-based metagenomic binning. Nucleic Acids Res. 50(W1): 132-137 (2022) - [j47]Ernesto Aparicio-Puerta, Cristina Gómez-Martín, Stavros Giannoukakos, José María Medina, Chantal Scheepbouwer, Adrián García-Moreno, Pedro Carmona-Saez, Bastian Fromm, Michiel Pegtel, Andreas Keller, Juan Antonio Marchal, Michael Hackenberg:
sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms. Nucleic Acids Res. 50(W1): 710-717 (2022) - [j46]Alejandro Martin-Gomez, Jakob Weiss, Andreas Keller, Ulrich Eck, Daniel Roth, Nassir Navab:
The Impact of Focus and Context Visualization Techniques on Depth Perception in Optical See-Through Head-Mounted Displays. IEEE Trans. Vis. Comput. Graph. 28(12): 4156-4171 (2022) - 2021
- [j45]Tobias Fehlmann, Fabian Kern, Pascal Hirsch, Robin Steinhaus, Dominik Seelow, Andreas Keller:
Aviator: a web service for monitoring the availability of web services. Nucleic Acids Res. 49(Webserver-Issue): 46-51 (2021) - [j44]Tobias Fehlmann, Fabian Kern, Omar Laham, Christina Backes, Jeffrey Solomon, Pascal Hirsch, Carsten Volz, Rolf Müller, Andreas Keller:
miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale. Nucleic Acids Res. 49(Webserver-Issue): 397-408 (2021) - [j43]Fabian Kern, Ernesto Aparicio-Puerta, Yongping Li, Tobias Fehlmann, Tim Kehl, Viktoria Wagner, Kamalika Ray, Nicole Ludwig, Hans-Peter Lenhof, Eckart Meese, Andreas Keller:
miRTargetLink 2.0 - interactive miRNA target gene and target pathway networks. Nucleic Acids Res. 49(Webserver-Issue): 409-416 (2021) - [c6]Daniel Roth, Kevin Yu, Frieder Pankratz, Gleb Gorbachev, Andreas Keller, Marc Lazarovici, Dirk Wilhelm, Simon Weidert, Nassir Navab, Ulrich Eck:
Real-time Mixed Reality Teleconsultation for Intensive Care Units in Pandemic Situations. VR Workshops 2021: 693-694 - 2020
- [j42]Fabian Kern, Christina Backes, Pascal Hirsch, Tobias Fehlmann, Martin Hart, Eckart Meese, Andreas Keller:
What's the target: understanding two decades of in silico microRNA-target prediction. Briefings Bioinform. 21(6): 1999-2010 (2020) - [j41]Tim Kehl, Fabian Kern, Christina Backes, Tobias Fehlmann, Daniel Stöckel, Eckart Meese, Hans-Peter Lenhof, Andreas Keller:
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database. Nucleic Acids Res. 48(Database-Issue): D142-D147 (2020) - [j40]Fabian Kern, Jérémy Amand, Ilya Senatorov, Alina Isakova, Christina Backes, Eckart Meese, Andreas Keller, Tobias Fehlmann:
miRSwitch: detecting microRNA arm shift and switch events. Nucleic Acids Res. 48(Webserver-Issue): W268-W274 (2020) - [j39]Nico Gerstner, Tim Kehl, Kerstin Lenhof, Anne Müller, Carolin Mayer, Lea Eckhart, Nadja Liddy Grammes, Caroline Diener, Martin Hart, Oliver Hahn, Jörn Walter, Tony Wyss-Coray, Eckart Meese, Andreas Keller, Hans-Peter Lenhof:
GeneTrail 3: advanced high-throughput enrichment analysis. Nucleic Acids Res. 48(Webserver-Issue): W515-W520 (2020) - [j38]Fabian Kern, Tobias Fehlmann, Jeffrey Solomon, Louisa Schwed, Nadja Liddy Grammes, Christina Backes, Kendall Van Keuren-Jensen, David W. Craig, Eckart Meese, Andreas Keller:
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. Nucleic Acids Res. 48(Webserver-Issue): W521-W528 (2020)
2010 – 2019
- 2019
- [j37]Cedric Christian Laczny, Valentina Galata, Achim Plum, Andreas E. Posch, Andreas Keller:
Assessing the heterogeneity of in silico plasmid predictions based on whole-genome-sequenced clinical isolates. Briefings Bioinform. 20(3): 857-865 (2019) - [j36]Tobias Fehlmann, Shashwat Sahay, Andreas Keller, Christina Backes:
A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites. Briefings Bioinform. 20(3): 1011-1020 (2019) - [j35]Lara Schneider, Tim Kehl, Kristina Thedinga, Nadja Liddy Grammes, Christina Backes, Christopher Mohr, Benjamin Schubert, Kerstin Lenhof, Nico Gerstner, Andreas Daniel Hartkopf, Markus Wallwiener, Oliver Kohlbacher, Andreas Keller, Eckart Meese, Norbert M. Graf, Hans-Peter Lenhof:
ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification. Bioinform. 35(24): 5171-5181 (2019) - [j34]Jérémy Amand, Tobias Fehlmann, Christina Backes, Andreas Keller:
DynaVenn: web-based computation of the most significant overlap between ordered sets. BMC Bioinform. 20(1): 743 (2019) - [j33]Valentina Galata, Cedric Christian Laczny, Christina Backes, Georg Hemmrich-Stanisak, Susanne Schmolke, Andre Franke, Eckart Meese, Mathias Herrmann, Lutz von Müller, Achim Plum, Rolf Müller, Cord Stähler, Andreas E. Posch, Andreas Keller:
Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11, 087 Clinical Isolates. Genom. Proteom. Bioinform. 17(2): 169-182 (2019) - [j32]Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Manfred Gogol, Walter Maetzler, Stephanie Deutscher, Simone Gurlit, Claudia Schulte, Anna-Katharina von Thaler, Christian Deuschle, Florian G. Metzger, Daniela Berg, Ulrike Suenkel, Verena Keller, Christina Backes, Hans-Peter Lenhof, Eckart Meese, Andreas Keller:
Machine Learning to Detect Alzheimer's Disease from Circulating Non-coding RNAs. Genom. Proteom. Bioinform. 17(4): 430-440 (2019) - [j31]Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller:
PLSDB: a resource of complete bacterial plasmids. Nucleic Acids Res. 47(Database-Issue): D195-D202 (2019) - 2018
- [j30]Valentina Galata, Christina Backes, Cedric Christian Laczny, Georg Hemmrich-Stanisak, Howard Li, Laura Smoot, Andreas E. Posch, Susanne Schmolke, Markus Bischoff, Lutz von Müller, Achim Plum, Andre Franke, Andreas Keller:
Comparing genome versus proteome-based identification of clinical bacterial isolates. Briefings Bioinform. 19(3): 495-505 (2018) - [j29]Tobias Fehlmann, Christina Backes, Julia Alles, Ulrike Fischer, Martin Hart, Fabian Kern, Hilde Langseth, Trine Rounge, Sinan Ugur Umu, Mustafa Kahraman, Thomas Laufer, Jan Haas, Cord Staehler, Nicole Ludwig, Matthias Hübenthal, Benjamin Meder, Andre Franke, Hans-Peter Lenhof, Eckart Meese, Andreas Keller:
A high-resolution map of the human small non-coding transcriptome. Bioinform. 34(10): 1621-1628 (2018) - [j28]Tim Kehl, Lara Schneider, Kathrin Kattler, Daniel Stöckel, Jenny Wegert, Nico Gerstner, Nicole Ludwig, Ute Distler, Markus Schick, Ulrich Keller, Stefan Tenzer, Manfred Gessler, Jörn Walter, Andreas Keller, Norbert M. Graf, Eckart Meese, Hans-Peter Lenhof:
REGGAE: a novel approach for the identification of key transcriptional regulators. Bioinform. 34(20): 3503-3510 (2018) - [j27]Andreas Keller, Tobias Fehlmann, Nicole Ludwig, Mustafa Kahraman, Thomas Laufer, Christina Backes, Claus Vogelmeier, Caroline Diener, Frank Biertz, Christian Herr, Rudolf A. Jörres, Hans-Peter Lenhof, Eckart Meese, Robert Bals:
Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development. Genom. Proteom. Bioinform. 16(3): 162-171 (2018) - [j26]Christina Backes, Tobias Fehlmann, Fabian Kern, Tim Kehl, Hans-Peter Lenhof, Eckart Meese, Andreas Keller:
miRCarta: a central repository for collecting miRNA candidates. Nucleic Acids Res. 46(Database-Issue): D160-D167 (2018) - [j25]Valeria Palmieri, Christina Backes, Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Eckart Meese, Andreas Keller:
IMOTA: an interactive multi-omics tissue atlas for the analysis of human miRNA-target interactions. Nucleic Acids Res. 46(Database-Issue): D770-D775 (2018) - 2017
- [j24]Christina Backes, Tim Kehl, Daniel Stöckel, Tobias Fehlmann, Lara Schneider, Eckart Meese, Hans-Peter Lenhof, Andreas Keller:
miRPathDB: a new dictionary on microRNAs and target pathways. Nucleic Acids Res. 45(Database-Issue): D90-D96 (2017) - [j23]Tim Kehl, Lara Schneider, Florian Schmidt, Daniel Stöckel, Nico Gerstner, Christina Backes, Eckart Meese, Andreas Keller, Marcel H. Schulz, Hans-Peter Lenhof:
RegulatorTrail: a web service for the identification of key transcriptional regulators. Nucleic Acids Res. 45(Webserver-Issue): W146-W153 (2017) - [j22]Cedric Christian Laczny, Christina Kiefer, Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller:
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation. Nucleic Acids Res. 45(Webserver-Issue): W171-W179 (2017) - [j21]Jörn Bethune, Lars Kraemer, Ingo Thomsen, Andreas Keller, David Ellinghaus, Andre Franke:
LitDB - Keeping Track of Research Papers From Your Institute Made Simple. Source Code Biol. Medicine 12(1): 5 (2017) - 2016
- [j20]Daniel Stöckel, Tim Kehl, Patrick Trampert, Lara Schneider, Christina Backes, Nicole Ludwig, Andreas Gerasch, Michael Kaufmann, Manfred Gessler, Norbert M. Graf, Eckart Meese, Andreas Keller, Hans-Peter Lenhof:
Multi-omics enrichment analysis using the GeneTrail2 web service. Bioinform. 32(10): 1502-1508 (2016) - [j19]Sabine C. Mueller, Christina Backes, Alexander Greß, Nina Baumgarten, Olga V. Kalinina, Andreas Moll, Oliver Kohlbacher, Eckart Meese, Andreas Keller:
BALL-SNPgp - from genetic variants toward computational diagnostics. Bioinform. 32(12): 1888-1890 (2016) - [j18]Alexander Marx, Christina Backes, Eckart Meese, Hans-Peter Lenhof, Andreas Keller:
EDISON-WMW: Exact Dynamic Programing Solution of the Wilcoxon-Mann-Whitney Test. Genom. Proteom. Bioinform. 14(1): 55-61 (2016) - [j17]Benjamin Meder, Hugo A. Katus, Andreas Keller:
Computational Cardiology - A New Discipline of Translational Research. Genom. Proteom. Bioinform. 14(4): 177-178 (2016) - [j16]Rouven Nietsch, Jan Haas, Alan Lai, Daniel Oehler, Stefan Mester, Karen S. Frese, Farbod Sedaghat-Hamedani, Elham Kayvanpour, Andreas Keller, Benjamin Meder:
The Role of Quality Control in Targeted Next-generation Sequencing Library Preparation. Genom. Proteom. Bioinform. 14(4): 200-206 (2016) - [j15]Christina Backes, Qurratulain T. Khaleeq, Eckart Meese, Andreas Keller:
miEAA: microRNA enrichment analysis and annotation. Nucleic Acids Res. 44(Webserver-Issue): W110-W116 (2016) - [j14]Alexander Greß, Vasily Ramensky, Joachim Büch, Andreas Keller, Olga V. Kalinina:
StructMAn: annotation of single-nucleotide polymorphisms in the structural context. Nucleic Acids Res. 44(Webserver-Issue): W463-W468 (2016) - [c5]Michael Backes, Pascal Berrang, Anna Hecksteden, Mathias Humbert, Andreas Keller, Tim Meyer:
Privacy in Epigenetics: Temporal Linkability of MicroRNA Expression Profiles. USENIX Security Symposium 2016: 1223-1240 - 2015
- [j13]Sabine C. Mueller, Christina Backes, Jan Haas, Hugo A. Katus, Benjamin Meder, Eckart Meese, Andreas Keller:
Pathogenicity prediction of non-synonymous single nucleotide variants in dilated cardiomyopathy. Briefings Bioinform. 16(5): 769-779 (2015) - [j12]Sachli Zafari, Christina Backes, Petra Leidinger, Eckart Meese, Andreas Keller:
Regulatory MicroRNA Networks: Complex Patterns of Target Pathways for Disease-related and Housekeeping MicroRNAs. Genom. Proteom. Bioinform. 13(3): 159-168 (2015) - 2014
- [c4]Christian Apprich, Klaus Höllig, Jörg Hörner, Andreas Keller, Esfandiar Nava Yazdani:
Finite Element Approximation with Hierarchical B-Splines. Curves and Surfaces 2014: 1-15 - 2013
- [j11]Daniel Stöckel, Oliver Müller, Tim Kehl, Andreas Gerasch, Christina Backes, Alexander Rurainski, Andreas Keller, Michael Kaufmann, Hans-Peter Lenhof:
NetworkTrail - a web service for identifying and visualizing deregulated subnetworks. Bioinform. 29(13): 1702-1703 (2013) - [c3]Oliver Zettinig, Tommaso Mansi, Bogdan Georgescu, Saikiran Rapaka, Ali Kamen, Jan Haas, Karen S. Frese, Farbod Sedaghat-Hamedani, Elham Kayvanpour, Ali Amr, Stefan Hardt, Derliz Mereles, Henning Steen, Andreas Keller, Hugo A. Katus, Benjamin Meder, Nassir Navab, Dorin Comaniciu:
From Medical Images to Fast Computational Models of Heart Electromechanics: An Integrated Framework towards Clinical Use. FIMH 2013: 249-258 - 2012
- [j10]Cedric Laczny, Petra Leidinger, Jan Haas, Nicole Ludwig, Christina Backes, Andreas Gerasch, Michael Kaufmann, Britta Vogel, Hugo A. Katus, Benjamin Meder, Cord Stähler, Eckart Meese, Hans-Peter Lenhof, Andreas Keller:
miRTrail - a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases. BMC Bioinform. 13: 36 (2012) - [j9]Cord F. Stähler, Andreas Keller, Petra Leidinger, Christina Backes, Anoop Chandran, Jöerg Wischhusen, Benjamin Meder, Eckart Meese:
Whole miRNome-wide Differential Co-expression of MicroRNAs. Genom. Proteom. Bioinform. 10(5): 285-294 (2012) - [j8]Andreas Fischer, Andreas Keller, Volkmar Frinken, Horst Bunke:
Lexicon-free handwritten word spotting using character HMMs. Pattern Recognit. Lett. 33(7): 934-942 (2012) - 2010
- [c2]Andreas Fischer, Andreas Keller, Volkmar Frinken, Horst Bunke:
HMM-based Word Spotting in Handwritten Documents Using Subword Models. ICPR 2010: 3416-3419
2000 – 2009
- 2009
- [j7]Andreas Keller, Christina Backes, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Eckart Meese, Hans-Peter Lenhof:
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. Bioinform. 25(21): 2787-2794 (2009) - [j6]Andreas Keller, Nicole Ludwig, Sabrina Heisel, Petra Leidinger, Claudia Andres, Wolf-Ingo Steudel, Hanno Huwer, Bernhard Burgeth, Matthias Hein, Joachim Weickert, Eckart Meese, Hans-Peter Lenhof:
Large-scale antibody profiling of human blood sera: The future of molecular diagnosis. Inform. Spektrum 32(4): 332-338 (2009) - 2008
- [b1]Andreas Keller:
Understanding cancer with bioinformatics. Saarland University, Germany, 2008 - [j5]Andreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof:
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinform. 9 (2008) - 2007
- [j4]Andreas Keller, Christina Backes, Hans-Peter Lenhof:
Computation of significance scores of unweighted Gene Set Enrichment Analyses. BMC Bioinform. 8 (2007) - [j3]Christina Backes, Andreas Keller, Jan Küntzer, Benny Kneissl, Nicole Comtesse, Yasser A. Elnakady, Rolf Müller, Eckart Meese, Hans-Peter Lenhof:
GeneTrail - advanced gene set enrichment analysis. Nucleic Acids Res. 35(Web-Server-Issue): 186-192 (2007) - [j2]Andreas Keller, Nicole Comtesse, Nicole Ludwig, Eckart Meese, Hans-Peter Lenhof:
SePaCS - a web-based application for classification of seroreactivity profiles. Nucleic Acids Res. 35(Web-Server-Issue): 683-687 (2007) - 2006
- [j1]Andreas Keller, Nicole Ludwig, Nicole Comtesse, Andreas Hildebrandt, Eckart Meese, Hans-Peter Lenhof:
A minimally invasive multiple marker approach allows highly efficient detection of meningioma tumors. BMC Bioinform. 7: 539 (2006)
1990 – 1999
- 1996
- [c1]Andreas Keller, Thomas Baehring, H. Krause, H. Richter, V. Natchkova:
Videodensitometrische und Videotopometrische Messungen in Röntgenbildern. Bildverarbeitung für die Medizin 1996
Coauthor Index
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