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ORCIDMartin T. Swain
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2010 – 2019
- 2019
[c14]Arthur Morris
, Justin Pachebat, Guy Robinson, Rachel Chalmers, Martin T. Swain:
Identifying and Resolving Genome Misassembly Issues Important for Biomarker Discovery in the Protozoan Parasite, Cryptosporidium. BIOINFORMATICS 2019: 90-100- [c13]Arthur Morris, Justin Pachebat, Graeme Tyson, Guy Robinson, Rachel Chalmers, Martin T. Swain:
Generating Reliable Genome Assemblies of Intestinal Protozoans from Clinical Samples for the Purpose of Biomarker Discovery. BIOSTEC (Selected Papers) 2019: 216-241 - 2016
- [j11]Altan Kara, Martin J. Vickers, Martin T. Swain, David E. Whitworth, Narcis Fernandez-Fuentes:
MetaPred2CS: a sequence-based meta-predictor for protein-protein interactions of prokaryotic two-component system proteins. Bioinform. 32(21): 3339-3341 (2016) - [j10]Umar Khan Niazi, Kathrin K. Geyer, Martin J. Vickers, Karl F. Hoffmann, Martin T. Swain:
DISMISS: detection of stranded methylation in MeDIP-Seq data. BMC Bioinform. 17: 295 (2016) - [j9]Alexandru E. Mizeranschi, Martin T. Swain, Raluca Scona, Quentin Fazilleau, Bartosz Bosak, Tomasz Piontek, Piotr Kopta, Paul Thompson, Werner Dubitzky:
MultiGrain/MAPPER: A distributed multiscale computing approach to modeling and simulating gene regulation networks. Future Gener. Comput. Syst. 63: 1-14 (2016) - 2015
- [j8]Altan Kara, Martin J. Vickers, Martin T. Swain, David E. Whitworth, Narcis Fernandez-Fuentes:
Genome-wide prediction of prokaryotic two-component system networks using a sequence-based meta-predictor. BMC Bioinform. 16: 297:1-297:9 (2015) - 2013
- [c12]Martin T. Swain:
Fast Comparison of Microbial Genomes Using the Chaos Games Representation for Metagenomic Applications. ICCS 2013: 1372-1381 - 2010
- [j7]Martin T. Swain, Johannes J. Mandel, Werner Dubitzky:
Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks. BMC Bioinform. 11: 459 (2010) - [j6]Martin T. Swain, Cândida G. Silva, Nuno Loureiro-Ferreira, Vitaliy Ostropytskyy, João Brito, Olivier Riche, Frederic T. Stahl, Werner Dubitzky, Rui M. M. Brito:
P-found: Grid-enabling distributed repositories of protein folding and unfolding simulations for data mining. Future Gener. Comput. Syst. 26(3): 424-433 (2010) - [j5]Valentin Kravtsov, Pavel Bar, David Carmeli, Assaf Schuster, Martin T. Swain:
A scheduling framework for large-scale, parallel, and topology-aware applications. J. Parallel Distributed Comput. 70(9): 983-992 (2010) - [c11]Valentin Kravtsov, Pavel Bar, David Carmeli, Assaf Schuster, Martin T. Swain:
A scheduling framework for large-scale, parallel, and topology-aware applications. IPDPS 2010: 1-12
2000 – 2009
- 2009
- [c10]Oliver Schmidt, José López, Francisco Azuaje, Paul Thompson, Martin T. Swain, Werner Dubitzky:
A standard-compliant global map of the bile acid/xenobiotic signaling network: Construction and automated query processing. BIOCOMP 2009: 657-663 - [c9]Pavel Bar, Camille Coti, Derek Groen, Thomas Hérault, Valentin Kravtsov, Assaf Schuster, Martin T. Swain:
Running Parallel Applications with Topology-Aware Grid Middleware. eScience 2009: 292-299 - [c8]Krzysztof Kurowski, Walter de Back, Werner Dubitzky, László Gulyás, George Kampis, Mariusz Mamonski, Gabor Szemes, Martin T. Swain:
Complex System Simulations with QosCosGrid. ICCS (1) 2009: 387-396 - 2008
- [j4]Vlado Stankovski, Martin T. Swain, Valentin Kravtsov, Thomas Niessen, Dennis Wegener, Jörg Kindermann, Werner Dubitzky:
Grid-enabling data mining applications with DataMiningGrid: An architectural perspective. Future Gener. Comput. Syst. 24(4): 259-279 (2008) - [j3]Vlado Stankovski, Martin T. Swain, Valentin Kravtsov, Thomas Niessen, Dennis Wegener, M. Rohm, Jernej Trnkoczy, Michael May, Jürgen Franke, Assaf Schuster, Werner Dubitzky:
Digging Deep into the Data Mine with DataMiningGrid. IEEE Internet Comput. 12(6): 69-76 (2008) - [c7]Martin T. Swain, Vitaliy Ostropytskyy, Cândida G. Silva, Frederic T. Stahl, Olivier Riche, Rui M. M. Brito, Werner Dubitzky:
Grid Computing Solutions for Distributed Repositories of Protein Folding and Unfolding Simulations. ICCS (3) 2008: 70-79 - [c6]Martin T. Swain, Johannes J. Mandel, Werner Dubitzky:
Comparing Grid Computing Solutions for Reverse-Engineering Gene Regulatory Networks. ICCS (1) 2008: 106-115 - [c5]Valentin Kravtsov, Martin T. Swain, Uri Dubin, Werner Dubitzky, Assaf Schuster:
A Fast and Efficient Algorithm for Topology-Aware Coallocation. ICCS (1) 2008: 274-283 - 2006
- [c4]Cândida G. Silva, Vitaliy Ostropytskyy, Nuno Loureiro-Ferreira, Daniel P. Berrar, Martin T. Swain, Werner Dubitzky, Rui M. M. Brito:
P-found: The Protein Folding and Unfolding Simulation Repository. CIBCB 2006: 1-8 - 2005
- [j2]Martin T. Swain, Anthony J. Brooks, Graham J. L. Kemp:
Predicting Peptide Interactions With Model Class II Mhc Structures. Int. J. Artif. Intell. Tools 14(4): 561-576 (2005) - [c3]Martin T. Swain, T. Hunniford, Johannes J. Mandel, Niall M. Palfreyman, Werner Dubitzky:
Modeling gene-regulatory networks using evolutionary algorithms and distributed computing. CCGRID 2005: 512-519 - 2002
- [j1]Martin T. Swain, Graham J. L. Kemp:
Modelling Protein Side-chain Conformations using Constraint Logic Programming. Comput. Chem. 26(1): 85-95 (2002) - 2001
- [c2]Martin T. Swain, Anthony J. Brooks, Graham J. L. Kemp:
An Automated Approach to Modeling Class II MHC Alleles and Predicting Peptide Binding. BIBE 2001: 81-88 - [c1]Martin T. Swain, Graham J. L. Kemp:
A CLP Approach to the Protein Side-Chain Placement Problem. CP 2001: 479-493
Coauthor Index
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