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ORCIDLena Maier-Hein
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- affiliation: German Cancer Research Center (DKFZ), Heidelberg, Germany
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2020 – today
- 2023
[j61]Tim Rädsch
, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Nicholas Schreck, A. Emre Kavur, Bünyamin Pekdemir, Tobias Roß, Annette Kopp-Schneider, Lena Maier-Hein:
Labelling instructions matter in biomedical image analysis. Nat. Mac. Intell. 5(3): 273-283 (2023)- [i55]Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein:
Understanding metric-related pitfalls in image analysis validation. CoRR abs/2302.01790 (2023) - [i54]Chinedu Innocent Nwoye, Tong Yu, Saurav Sharma, Aditya Murali, Deepak Alapatt, Armine Vardazaryan, Kun Yuan, Jonas Hajek, Wolfgang Reiter, Amine Yamlahi, Finn-Henri Smidt, Xiaoyang Zou, Guoyan Zheng, Bruno Oliveira, Helena R. Torres, Satoshi Kondo, Satoshi Kasai, Felix Holm, Ege Özsoy, Shuangchun Gui, Han Li, Sista Raviteja, Rachana Sathish, Pranav Poudel, Binod Bhattarai, Ziheng Wang, Guo Rui, Melanie Schellenberg, João L. Vilaça, Tobias Czempiel, Zhenkun Wang, Debdoot Sheet, Shrawan Kumar Thapa, Max Berniker, Patrick Godau, Pedro Morais, Sudarshan Regmi, Thuy Nuong Tran, Jaime C. Fonseca, Jan-Hinrich Nölke, Estevão Lima, Eduard Vazquez, Lena Maier-Hein, Nassir Navab, Pietro Mascagni, Barbara Seeliger, Cristians Gonzalez, Didier Mutter, Nicolas Padoy:
CholecTriplet2022: Show me a tool and tell me the triplet - an endoscopic vision challenge for surgical action triplet detection. CoRR abs/2302.06294 (2023) - [i53]Kris K. Dreher, Leonardo Ayala, Melanie Schellenberg, Marco Hübner, Jan-Hinrich Nölke, Tim J. Adler, Silvia Seidlitz, Jan Sellner, Alexander Studier-Fischer, Janek Gröhl, Felix Nickel, Ullrich Köthe, Alexander Seitel, Lena Maier-Hein:
Unsupervised Domain Transfer with Conditional Invertible Neural Networks. CoRR abs/2303.10191 (2023) - [i52]Jan Sellner, Silvia Seidlitz, Alexander Studier-Fischer, Alessandro Motta, Berkin Özdemir, Beat Peter Müller-Stich, Felix Nickel, Lena Maier-Hein:
Semantic segmentation of surgical hyperspectral images under geometric domain shifts. CoRR abs/2303.10972 (2023) - [i51]Patrick Godau, Piotr Kalinowski, Evangelia Christodoulou, Annika Reinke, Minu Tizabi, Luciana Ferrer, Paul Jäger, Lena Maier-Hein:
Deployment of Image Analysis Algorithms under Prevalence Shifts. CoRR abs/2303.12540 (2023) - [i50]Amine Yamlahi, Thuy Nuong Tran, Patrick Godau, Melanie Schellenberg, Dominik Michael, Finn-Henri Smidt, Jan-Hinrich Nölke, Tim Adler, Minu Dietlinde Tizabi, Chinedu Innocent Nwoye, Nicolas Padoy, Lena Maier-Hein:
Self-distillation for surgical action recognition. CoRR abs/2303.12915 (2023) - [i49]Aneeq Zia, Kiran Bhattacharyya, Xi Liu, Max Berniker, Ziheng Wang, Rogerio Nespolo, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Bo Liu, David Austin, Yiheng Wang, Michal Futrega, Jean-Francois Puget, Zhenqiang Li, Yoichi Sato, Ryo Fujii, Ryo Hachiuma, Mana Masuda, Hideo Saito, An Wang, Mengya Xu, Mobarakol Islam, Long Bai, Winnie Pang, Hongliang Ren, Chinedu Innocent Nwoye, Luca Sestini, Nicolas Padoy, Maximilian Nielsen, Samuel Schüttler, Thilo Sentker, Hümeyra Husseini, Ivo M. Baltruschat, Rüdiger Schmitz, René Werner, Aleksandr Matsun, Mugariya Farooq, Numan Saeed, Jose Renato Restom Viera, Mohammad Yaqub, Neil Getty, Fangfang Xia, Zixuan Zhao, Xiaotian Duan, Xing Yao, Ange Lou, Hao Yang, Jintong Han, Jack H. Noble, Jie Ying Wu, Tamer Abdulbaki Alshirbaji, Nour Aldeen Jalal, Herag Arabian, Ning Ding, Knut Moeller, Weiliang Chen, Quan He, Lena Maier-Hein, Danail Stoyanov, Stefanie Speidel, Anthony M. Jarc:
Surgical tool classification and localization: results and methods from the MICCAI 2022 SurgToolLoc challenge. CoRR abs/2305.07152 (2023) - 2022
- [j60]Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1477-1486 (2022) - [j59]Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Correction to: Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1487 (2022) - [j58]Benjamin J. Mittmann, Michael Braun, Frank Runck, Bernd Schmitz, Thuy Nuong Tran, Amine Yamlahi, Lena Maier-Hein, Alfred M. Franz:
Deep learning-based classification of DSA image sequences of patients with acute ischemic stroke. Int. J. Comput. Assist. Radiol. Surg. 17(9): 1633-1641 (2022) - [j57]Benjamin J. Mittmann, Alexander Seitel, Gernot Echner, Wiebke Johnen, Regula Gnirs, Lena Maier-Hein, Alfred M. Franz:
Reattachable fiducial skin marker for automatic multimodality registration. Int. J. Comput. Assist. Radiol. Surg. 17(11): 2141-2150 (2022) - [j56]P. J. Eddie Edwards, Dimitris Psychogyios, Stefanie Speidel, Lena Maier-Hein, Danail Stoyanov:
SERV-CT: A disparity dataset from cone-beam CT for validation of endoscopic 3D reconstruction. Medical Image Anal. 76: 102302 (2022) - [j55]Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Doreen Heckmann-Nötzel, Hannes Götz Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Tobias Roß, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Justin Collins, Ines Gockel, Jan Goedeke, Daniel A. Hashimoto, Luc Joyeux, Kyle Lam, Daniel Richard Leff, Amin Madani, Hani J. Marcus, Ozanan R. Meireles, Alexander Seitel, Dogu Teber, Frank Ückert, Beat P. Müller-Stich, Pierre Jannin, Stefanie Speidel:
Surgical data science - from concepts toward clinical translation. Medical Image Anal. 76: 102306 (2022) - [j54]Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim J. Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. Medical Image Anal. 80: 102488 (2022) - [j53]Lisa Kausch, Sarina Thomas, Holger Kunze, Tobias Norajitra, André Klein, Leonardo Ayala, Jan Siad El Barbari, Eric Mandelka, Maxim Privalov, Sven Yves Vetter, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
C-arm positioning for standard projections during spinal implant placement. Medical Image Anal. 81: 102557 (2022) - [j52]Esther E. Bron, Stefan Klein, Annika Reinke, Janne M. Papma, Lena Maier-Hein, Daniel C. Alexander, Neil P. Oxtoby:
Ten years of image analysis and machine learning competitions in dementia. NeuroImage 253: 119083 (2022) - [j51]Kyle Lam, Michael D. Abràmoff, José M. Balibrea, Steven M. Bishop, Richard R. Brady, Rachael Callcut, Manish Chand, Justin Collins, Markus K. Diener, Matthias Eisenmann, Kelly Fermont, Manoel Galvao Neto, Gregory D. Hager, Robert J. Hinchliffe, Alan Horgan, Pierre Jannin, Alexander Langerman, Kartik Logishetty, Amit Mahadik, Lena Maier-Hein, Esteban Martín Antona, Pietro Mascagni, Ryan K. Mathew, Beat P. Müller-Stich, Thomas Neumuth, Felix Nickel, Adrian Park, Gianluca Pellino, Frank Rudzicz, Sam Shah, Mark Slack, Myles J. Smith, Naeem Soomro, Stefanie Speidel, Danail Stoyanov, Henry S. Tilney, Martin Wagner, Ara Darzi, James Kinross, Sanjay Purkayastha:
A Delphi consensus statement for digital surgery. npj Digit. Medicine 5 (2022) - [j50]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
MOOD 2020: A Public Benchmark for Out-of-Distribution Detection and Localization on Medical Images. IEEE Trans. Medical Imaging 41(10): 2728-2738 (2022) - [c104]Matthias Eisenmann, Minu Dietlinde Tizabi, Keno März, Lena Maier-Hein:
Abstract: How to Generate Patient Benefit with Surgical Data Science - Results of an International Delphi Process. Bildverarbeitung für die Medizin 2022: 113 - [c103]Lisa Kausch, Sarina Thomas, Holger Kunze, Tobias Norajitra, André Klein, Jan Siad El Barbari, Maxim Privalov, Sven Yves Vetter, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
Abstract: C-arm Positioning for Spinal Standard Projections in Different Intra-operative Settings. Bildverarbeitung für die Medizin 2022: 127 - [c102]Patrick Godau, Lena Maier-Hein:
Abstract: Task Fingerprinting for Meta Learning in Biomedical Image Analysis. Bildverarbeitung für die Medizin 2022: 260 - [c101]Thuy Nuong Tran, Fabian Isensee, Lars Kra mer, Amine Yamlahi, Tim Adler, Patrick Godau, Minu Tizabi, Lena Maier-Hein:
Heterogeneous Model Ensemble For Automatic Polyp Segmentation In Endoscopic Video Sequences. EndoCV@ISBI 2022: 20-24 - [c100]Amine Yamlahi, Patrick Godau, Thuy Nuong Tran, Lucas-Raphael Muller, Tim Adler, Minu Tizabi, Michael Baumgartner, Paul Jäger, Lena Maier-Hein:
Heterogeneous Model Ensemble For Automatic Polyp Detection and Tracking In Colonoscopy. EndoCV@ISBI 2022: 25-28 - [i48]Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir M. Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger:
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR abs/2206.01653 (2022) - [i47]Tim Rädsch, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Nicholas Schreck, A. Emre Kavur, Bünyamin Pekdemir, Tobias Roß, Annette Kopp-Schneider, Lena Maier-Hein:
Labeling instructions matter in biomedical image analysis. CoRR abs/2207.09899 (2022) - [i46]M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murray, Andriy Myronenko, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang, Yiwen Li, Yipeng Hu, Yunguan Fu, Benjamin Gorman, Hans J. Johnson, Brad W. Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin S. Kirby, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen R. Aylward, Prerna Dogra, Sébastien Ourselin, Andrew Feng:
MONAI: An open-source framework for deep learning in healthcare. CoRR abs/2211.02701 (2022) - [i45]Thuy Nuong Tran, Tim Adler, Amine Yamlahi, Evangelia Christodoulou, Patrick Godau, Annika Reinke, Minu Dietlinde Tizabi, Peter Sauer, Tillmann Persicke, Jörg Gerhard Albert, Lena Maier-Hein:
Sources of performance variability in deep learning-based polyp detection. CoRR abs/2211.09708 (2022) - [i44]Aneeq Zia, Kiran Bhattacharyya, Xi Liu, Ziheng Wang, Max Berniker, Satoshi Kondo, Emanuele Colleoni, Dimitris Psychogyios, Yueming Jin, Jinfan Zhou, Evangelos B. Mazomenos, Lena Maier-Hein, Danail Stoyanov, Stefanie Speidel, Anthony M. Jarc:
Objective Surgical Skills Assessment and Tool Localization: Results from the MICCAI 2021 SimSurgSkill Challenge. CoRR abs/2212.04448 (2022) - 2021
- [j49]Niklas Holzwarth, Melanie Schellenberg, Janek Gröhl, Kris Dreher, Jan-Hinrich Nölke, Alexander Seitel, Minu Dietlinde Tizabi, Beat P. Müller-Stich, Lena Maier-Hein:
Tattoo tomography: Freehand 3D photoacoustic image reconstruction with an optical pattern. Int. J. Comput. Assist. Radiol. Surg. 16(7): 1101-1110 (2021) - [j48]Lisa Kausch, Sarina Thomas, Holger Kunze, Maxim Privalov, Sven Yves Vetter, Jochen Franke, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
Correction to: Toward automatic C‑arm positioning for standard projections in orthopedic surgery. Int. J. Comput. Assist. Radiol. Surg. 16(9): 1637 (2021) - [j47]Tobias Roß, Annika Reinke, Peter M. Full, Martin Wagner, Hannes Kenngott, Martin Apitz, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Pablo Arbeláez, Gui-Bin Bian, Sebastian Bodenstedt, Jon Lindström Bolmgren, Laura Bravo Sánchez, Hua-Bin Chen, Cristina González, Dong Guo, Pål Halvorsen, Pheng-Ann Heng, Enes Hosgor, Zeng-Guang Hou, Fabian Isensee, Debesh Jha, Tingting Jiang, Yueming Jin, Kadir Kirtaç, Sabrina Kletz, Stefan Leger, Zhixuan Li, Klaus H. Maier-Hein, Zhen-Liang Ni, Michael A. Riegler, Klaus Schoeffmann, Ruohua Shi, Stefanie Speidel, Michael Stenzel, Isabell Twick, Guotai Wang, Jiacheng Wang, Liansheng Wang, Lu Wang, Yujie Zhang, Yan-Jie Zhou, Lei Zhu, Manuel Wiesenfarth, Annette Kopp-Schneider, Beat P. Müller-Stich, Lena Maier-Hein:
Comparative validation of multi-instance instrument segmentation in endoscopy: Results of the ROBUST-MIS 2019 challenge. Medical Image Anal. 70: 101920 (2021) - [j46]Jianyu Lin, Neil T. Clancy, Ji Qi, Yang Hu, Taran Tatla, Danail Stoyanov, Lena Maier-Hein, Daniel S. Elson:
Corrigendum to Dual-modality endoscopic probe for tissue surface shape reconstruction and hyperspectral imaging enabled by deep neural networks [Medical Image Analysis 48 (2018) 162-176/2018.06.004]. Medical Image Anal. 72: 102103 (2021) - [c99]Lisa Kausch, Sarina Thomas, Holger Kunze, Maxim Privalov, Sven Yves Vetter, Jochen Franke, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
Abstract: Towards Automatic C-arm Positioning for Standard Projections in Orthopedic Surgery. Bildverarbeitung für die Medizin 2021: 171 - [c98]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. Bildverarbeitung für die Medizin 2021: 330-335 - [c97]Lisa Kausch, Sarina Thomas, Holger Kunze, Tobias Norajitra, André Klein, Jan Siad El Barbari, Maxim Privalov, Sven Yves Vetter, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
C-Arm Positioning for Spinal Standard Projections in Different Intra-operative Settings. MICCAI (4) 2021: 352-362 - [c96]Patrick Godau, Lena Maier-Hein:
Task Fingerprinting for Meta Learning inBiomedical Image Analysis. MICCAI (4) 2021: 436-446 - [i43]Max Allan, A. Jonathan McLeod, Congcong Wang, Jean-Claude Rosenthal, Zhenglei Hu, Niklas Gard, Peter Eisert, Ke Xue Fu, Trevor Zeffiro, Wenyao Xia, Zhanshi Zhu, Huoling Luo, Fucang Jia, Xiran Zhang, Xiaohong Li, Lalith Sharan, Thomas Kurmann, Sebastian Schmid, Raphael Sznitman, Dimitris Psychogyios, Mahdi Azizian, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel:
Stereo Correspondence and Reconstruction of Endoscopic Data Challenge. CoRR abs/2101.01133 (2021) - [i42]Aneeq Zia, Kiran Bhattacharyya, Xi Liu, Ziheng Wang, Satoshi Kondo, Emanuele Colleoni, Beatrice van Amsterdam, Razeen Hussain, Raabid Hussain, Lena Maier-Hein, Danail Stoyanov, Stefanie Speidel, Anthony M. Jarc:
Surgical Visual Domain Adaptation: Results from the MICCAI 2020 SurgVisDom Challenge. CoRR abs/2102.13644 (2021) - [i41]Melanie Schellenberg, Janek Gröhl, Kris Dreher, Niklas Holzwarth, Minu Dietlinde Tizabi, Alexander Seitel, Lena Maier-Hein:
Data-driven generation of plausible tissue geometries for realistic photoacoustic image synthesis. CoRR abs/2103.15510 (2021) - [i40]Annika Reinke, Matthias Eisenmann, Minu Dietlinde Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin M. Kurç, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein:
Common Limitations of Image Processing Metrics: A Picture Story. CoRR abs/2104.05642 (2021) - [i39]Sarthak Pati, Ujjwal Baid, Maximilian Zenk, Brandon Edwards, Micah J. Sheller, G. Anthony Reina, Patrick Foley, Alexey Gruzdev, Jason Martin, Shadi Albarqouni, Yong Chen, Russell Taki Shinohara, Annika Reinke, David Zimmerer, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Lena Maier-Hein, Jens Kleesiek, Bjoern H. Menze, Klaus H. Maier-Hein, Spyridon Bakas:
The Federated Tumor Segmentation (FeTS) Challenge. CoRR abs/2105.05874 (2021) - [i38]Janek Gröhl, Melanie Schellenberg, Kris Dreher, Niklas Holzwarth, Minu Dietlinde Tizabi, Alexander Seitel, Lena Maier-Hein:
Semantic segmentation of multispectral photoacoustic images using deep learning. CoRR abs/2105.09624 (2021) - [i37]Leonardo Ayala, Sebastian J. Wirkert, Anant Vemuri, Tim Adler, Silvia Seidlitz, Sebastian Pirmann, Christina Engels, Dogu Teber, Lena Maier-Hein:
Video-rate multispectral imaging in laparoscopic surgery: First-in-human application. CoRR abs/2105.13901 (2021) - [i36]Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso:
The Medical Segmentation Decathlon. CoRR abs/2106.05735 (2021) - [i35]Maximilian Dietrich, Silvia Seidlitz, Nicholas Schreck, Manuel Wiesenfarth, Patrick Godau, Minu Tizabi, Jan Sellner, Sebastian Marx, Samuel Knödler, Michael M. Allers, Leonardo Ayala, Karsten Schmidt, Thorsten Brenner, Alexander Studier-Fischer, Felix Nickel, Beat P. Müller-Stich, Annette Kopp-Schneider, Markus A. Weigand, Lena Maier-Hein:
Machine learning-based analysis of hyperspectral images for automated sepsis diagnosis. CoRR abs/2106.08445 (2021) - [i34]Tobias Roß, Pierangela Bruno, Annika Reinke, Manuel Wiesenfarth, Lisa Koeppel, Peter M. Full, Bünyamin Pekdemir, Patrick Godau, Darya Trofimova, Fabian Isensee, Sara Moccia, Francesco Calimeri, Beat P. Müller-Stich, Annette Kopp-Schneider, Lena Maier-Hein:
How can we learn (more) from challenges? A statistical approach to driving future algorithm development. CoRR abs/2106.09302 (2021) - [i33]Patrick Godau, Lena Maier-Hein:
Task Fingerprinting for Meta Learning in Biomedical Image Analysis. CoRR abs/2107.03949 (2021) - [i32]Martin Wagner, Beat Peter Müller-Stich, Anna Kisilenko, Duc Tran, Patrick Heger, Lars Mündermann, David M. Lubotsky, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Annika Reinke, Tong Yu, Armine Vardazaryan, Chinedu Innocent Nwoye, Nicolas Padoy, Xinyang Liu, Eung-Joo Lee, Constantin Disch, Hans Meine, Tong Xia, Fucang Jia, Satoshi Kondo, Wolfgang Reiter, Yueming Jin, Yonghao Long, Meirui Jiang, Qi Dou, Pheng-Ann Heng, Isabell Twick, Kadir Kirtaç, Enes Hosgor, Jon Lindström Bolmgren, Michael Stenzel, Björn von Siemens, Hannes Götz Kenngott, Felix Nickel, Moritz von Frankenberg, Franziska Mathis-Ullrich, Lena Maier-Hein, Stefanie Speidel, Sebastian Bodenstedt:
Comparative Validation of Machine Learning Algorithms for Surgical Workflow and Skill Analysis with the HeiChole Benchmark. CoRR abs/2109.14956 (2021) - [i31]Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. CoRR abs/2111.05408 (2021) - [i30]Esther E. Bron, Stefan Klein, Annika Reinke, Janne M. Papma, Lena Maier-Hein, Daniel C. Alexander, Neil P. Oxtoby:
Ten years of image analysis and machine learning competitions in dementia. CoRR abs/2112.07922 (2021) - 2020
- [j45]Georges Hattab, Marvin Arnold, Leon Strenger, Max Allan, Darja Arsentjeva, Oliver Gold, Tobias Simpfendörfer, Lena Maier-Hein, Stefanie Speidel:
Kidney edge detection in laparoscopic image data for computer-assisted surgery. Int. J. Comput. Assist. Radiol. Surg. 15(3): 379-387 (2020) - [j44]Lisa Kausch, Sarina Thomas, Holger Kunze, Maxim Privalov, Sven Yves Vetter, Jochen Franke, Andreas H. Mahnken, Lena Maier-Hein, Klaus H. Maier-Hein:
Toward automatic C-arm positioning for standard projections in orthopedic surgery. Int. J. Comput. Assist. Radiol. Surg. 15(7): 1095-1105 (2020) - [j43]Leonardo Ayala, Silvia Seidlitz, Anant Vemuri, Sebastian J. Wirkert, Thomas Kirchner, Tim J. Adler, Christina Engels, Dogu Teber, Lena Maier-Hein:
Light source calibration for multispectral imaging in surgery. Int. J. Comput. Assist. Radiol. Surg. 15(7): 1117-1125 (2020) - [j42]Neil T. Clancy, Geoffrey Jones, Lena Maier-Hein, Daniel S. Elson, Danail Stoyanov:
Surgical spectral imaging. Medical Image Anal. 63: 101699 (2020) - [j41]Lena Maier-Hein, Annika Reinke, Michal Kozubek, Anne L. Martel, Tal Arbel, Matthias Eisenmann, Allan Hanbury, Pierre Jannin, Henning Müller, Sinan Onogur, Julio Saez-Rodriguez, Bram van Ginneken, Annette Kopp-Schneider, Bennett A. Landman:
BIAS: Transparent reporting of biomedical image analysis challenges. Medical Image Anal. 66: 101796 (2020) - [c95]Florian Hennig, Florian Pfiz, Diana Mîndroc-Filimon, Lena Maier-Hein, Bünyamin Pekdemir, Alexander Seitel, Alfred Michael Franz:
Reproduzierbare Kalibrierung von elektromagnetischen Feldverzerrungen. Bildverarbeitung für die Medizin 2020: 88-93 - [i29]Max Allan, Satoshi Kondo, Sebastian Bodenstedt, Stefan Leger, Rahim Kadkhodamohammadi, Imanol Luengo, Félix Fuentes-Hurtado, Evangello Flouty, Ahmed Kedir Mohammed, Marius Pedersen, Avinash Kori, Alex Varghese, Ganapathy Krishnamurthi, David Rauber, Robert Mendel, Christoph Palm, Sophia Bano, Guinther Saibro, Chi-Sheng Shih, Hsun-An Chiang, Juntang Zhuang, Junlin Yang, Vladimir Iglovikov, Anton Dobrenkii, Madhu Reddiboina, Anubhav Reddy, Xingtong Liu, Cong Gao, Mathias Unberath, Mahdi Azizian, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel:
2018 Robotic Scene Segmentation Challenge. CoRR abs/2001.11190 (2020) - [i28]Tobias Roß, Annika Reinke, Peter M. Full, Martin Wagner, Hannes Kenngott, Martin Apitz, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Pablo Arbeláez, Gui-Bin Bian, Sebastian Bodenstedt, Jon Lindström Bolmgren, Laura Bravo Sánchez, Hua-Bin Chen, Cristina González, Dong Guo, Pål Halvorsen, Pheng-Ann Heng, Enes Hosgor, Zeng-Guang Hou, Fabian Isensee, Debesh Jha, Tingting Jiang, Yueming Jin, Kadir Kirtaç, Sabrina Kletz, Stefan Leger, Zhixuan Li, Klaus H. Maier-Hein, Zhen-Liang Ni, Michael A. Riegler, Klaus Schoeffmann, Ruohua Shi, Stefanie Speidel, Michael Stenzel, Isabell Twick, Guotai Wang, Jiacheng Wang, Liansheng Wang, Lu Wang, Yujie Zhang, Yan-Jie Zhou, Lei Zhu, Manuel Wiesenfarth, Annette Kopp-Schneider, Beat Peter Müller-Stich, Lena Maier-Hein:
Robust Medical Instrument Segmentation Challenge 2019. CoRR abs/2003.10299 (2020) - [i27]Lena Maier-Hein, Martin Wagner, Tobias Roß, Annika Reinke, Sebastian Bodenstedt, Peter M. Full, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Anna Kisilenko, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Minu Tizabi, Matthias Eisenmann, Tim J. Adler, Janek Gröhl, Melanie Schellenberg, Silvia Seidlitz, T. Y. Emmy Lai, Veith Roethlingshoefer, Fabian Both, Sebastian Bittel, Marc Mengler, Martin Apitz, Stefanie Speidel, Hannes Götz Kenngott, Beat P. Müller-Stich:
Heidelberg Colorectal Data Set for Surgical Data Science in the Sensor Operating Room. CoRR abs/2005.03501 (2020) - [i26]Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Beat Peter Müller-Stich, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Hannes Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Pierre Jannin, Stefanie Speidel:
Surgical Data Science - from Concepts to Clinical Translation. CoRR abs/2011.02284 (2020) - [i25]Janek Gröhl, Melanie Schellenberg, Kris Dreher, Lena Maier-Hein:
Deep learning for biomedical photoacoustic imaging: A review. CoRR abs/2011.02744 (2020) - [i24]Niklas Holzwarth, Melanie Schellenberg, Janek Gröhl, Kris Dreher, Jan-Hinrich Nölke, Alexander Seitel, Minu Dietlinde Tizabi, Beat P. Müller-Stich, Lena Maier-Hein:
Tattoo tomography: Freehand 3D photoacoustic image reconstruction with an optical pattern. CoRR abs/2011.04997 (2020) - [i23]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. CoRR abs/2011.05110 (2020) - [i22]Darya Trofimova, Tim Adler, Lisa Kausch, Lynton Ardizzone, Klaus H. Maier-Hein, Ullrich Köthe, Carsten Rother, Lena Maier-Hein:
Representing Ambiguity in Registration Problems with Conditional Invertible Neural Networks. CoRR abs/2012.08195 (2020) - [i21]P. J. Eddie Edwards, Dimitris Psychogyios, Stefanie Speidel, Lena Maier-Hein, Danail Stoyanov:
SERV-CT: A disparity dataset from CT for validation of endoscopic 3D reconstruction. CoRR abs/2012.11779 (2020)
2010 – 2019
- 2019
- [j40]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. Int. J. Comput. Assist. Radiol. Surg. 14(6): 997-1007 (2019) - [j39]Sarina Thomas, Fabian Isensee, Simon Kohl, Maxim Privalov, Nils Beisemann, Benedict Swartman, Holger Keil, Sven Yves Vetter, Jochen Franke, Paul Alfred Grützner, Lena Maier-Hein, Marco Nolden, Klaus H. Maier-Hein:
Computer-assisted intra-operative verification of surgical outcome for the treatment of syndesmotic injuries through contralateral side comparison. Int. J. Comput. Assist. Radiol. Surg. 14(12): 2211-2220 (2019) - [j38]Xiaofei Du, Maximilian Allan, Sebastian Bodenstedt, Lena Maier-Hein, Stefanie Speidel, Alessio Dore, Danail Stoyanov:
Patch-based adaptive weighting with segmentation and scale (PAWSS) for visual tracking in surgical video. Medical Image Anal. 57: 120-135 (2019) - [c94]Alfred Michael Franz, Herman Alexander Jaeger, Alexander Seitel, Pádraig Cantillon-Murphy, Lena Maier-Hein:
Open-Source Tracked Ultrasound with Anser Electromagnetic Tracking. Bildverarbeitung für die Medizin 2019: 232-237 - [c93]Benjamin J. Mittmann, Alexander Seitel, Lena Maier-Hein, Alfred M. Franz:
Navigierte Interventionen im Kopf- und Halsbereich - Standardisiertes Assessment eines neuen, handlichen Feldgenerators. Bildverarbeitung für die Medizin 2019: 238-243 - [c92]Leonardo Ayala, Sebastian J. Wirkert, Mildred A. Herrera, Adrián Hernández-Aguilera, Anant Suraj Vemuri, Edgar Santos, Lena Maier-Hein:
Abstract: Multispectral Imaging Enables Visualization of Spreading Depolarizations in Gyrencephalic Brain. Bildverarbeitung für die Medizin 2019: 244 - [c91]Leonardo A. Ayala, Sebastian J. Wirkert, Janek Gröhl, Mildred A. Herrera, Adrián Hernández-Aguilera, Anant Suraj Vemuri, Edgar Santos, Lena Maier-Hein:
Live Monitoring of Haemodynamic Changes with Multispectral Image Analysis. OR/MLCN@MICCAI 2019: 38-46 - [c90]Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of Distribution Detection for Intra-operative Functional Imaging. UNSURE/CLIP@MICCAI 2019: 75-82 - [c89]Micha Pfeiffer, Isabel Funke, Maria R. Robu, Sebastian Bodenstedt, Leon Strenger, Sandy Engelhardt, Tobias Roß, Matthew J. Clarkson, Kurinchi Gurusamy, Brian R. Davidson, Lena Maier-Hein, Carina Riediger, Thilo Welsch, Jürgen Weitz, Stefanie Speidel:
Generating Large Labeled Data Sets for Laparoscopic Image Processing Tasks Using Unpaired Image-to-Image Translation. MICCAI (5) 2019: 119-127 - [i20]Thomas Kirchner, Janek Gröhl, Franz Sattler, Moritz S. Bischoff, Angelika Laha, Marco Nolden, Lena Maier-Hein:
An open-source software platform for translational photoacoustic research and its application to motion-corrected blood oxygenation estimation. CoRR abs/1901.09781 (2019) - [i19]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Estimation of blood oxygenation with learned spectral decoloring for quantitative photoacoustic imaging (LSD-qPAI). CoRR abs/1902.05839 (2019) - [i18]Max Allan, Alexey Shvets, Thomas Kurmann, Zichen Zhang, Rahul Duggal, Yun-Hsuan Su, Nicola Rieke, Iro Laina, Niveditha Kalavakonda, Sebastian Bodenstedt, Luis C. García-Peraza, Wenqi Li, Vladimir Iglovikov, Huoling Luo, Jian Yang, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel, Mahdi Azizian:
2017 Robotic Instrument Segmentation Challenge. CoRR abs/1902.06426 (2019) - [i17]Amber L. Simpson, Michela Antonelli, Spyridon Bakas, Michel Bilello, Keyvan Farahani, Bram van Ginneken, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Jennifer Golia-Pernicka, Stephan Heckers, William R. Jarnagin, Maureen McHugo, Sandy Napel, Eugene Vorontsov, Lena Maier-Hein, M. Jorge Cardoso:
A large annotated medical image dataset for the development and evaluation of segmentation algorithms. CoRR abs/1902.09063 (2019) - [i16]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. CoRR abs/1903.03441 (2019) - [i15]Micha Pfeiffer, Isabel Funke, Maria R. Robu, Sebastian Bodenstedt, Leon Strenger, Sandy Engelhardt, Tobias Roß, Matthew J. Clarkson, Kurinchi Gurusamy, Brian R. Davidson, Lena Maier-Hein, Carina Riediger, Thilo Welsch, Jürgen Weitz, Stefanie Speidel:
Generating large labeled data sets for laparoscopic image processing tasks using unpaired image-to-image translation. CoRR abs/1907.02882 (2019) - [i14]Lena Maier-Hein, Annika Reinke, Michal Kozubek, Anne L. Martel, Tal Arbel, Matthias Eisenmann, Allan Hanbury, Pierre Jannin, Henning Müller, Sinan Onogur, Julio Saez-Rodriguez, Bram van Ginneken, Annette Kopp-Schneider, Bennett A. Landman:
BIAS: Transparent reporting of biomedical image analysis challenges. CoRR abs/1910.04071 (2019) - [i13]Manuel Wiesenfarth, Annika Reinke, Bennett A. Landman, Manuel Jorge Cardoso, Lena Maier-Hein, Annette Kopp-Schneider:
Methods and open-source toolkit for analyzing and visualizing challenge results. CoRR abs/1910.05121 (2019) - [i12]Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of distribution detection for intra-operative functional imaging. CoRR abs/1911.01877 (2019) - 2018
- [j37]Tobias Roß, David Zimmerer, Anant Suraj Vemuri, Fabian Isensee, Manuel Wiesenfarth, Sebastian Bodenstedt, Fabian Both, Philip Kessler, Martin Wagner, Beat Müller, Hannes Kenngott, Stefanie Speidel, Annette Kopp-Schneider, Klaus H. Maier-Hein, Lena Maier-Hein:
Exploiting the potential of unlabeled endoscopic video data with self-supervised learning. Int. J. Comput. Assist. Radiol. Surg. 13(6): 925-933 (2018) - [j36]Maxime Descoteaux, Lena Maier-Hein, Alfred M. Franz, Pierre Jannin, D. Louis Collins, Simon Duchesne:
Guest editorial for the IJCARS special issue on MICCAI 2017. Int. J. Comput. Assist. Radiol. Surg. 13(9): 1309-1310 (2018) - [j35]Bernard Gibaud, Germain Forestier, Carolin Feldmann, Giancarlo Ferrigno, Paulo J. S. Gonçalves, Tamás Haidegger, Chantal Julliard, Darko Katic, Hannes Kenngott, Lena Maier-Hein, Keno März, Elena De Momi, Dénes Ákos Nagy, Hirenkumar Nakawala, Juliane Neumann, Thomas Neumuth, Javier Rojas Balderrama, Stefanie Speidel, Martin Wagner, Pierre Jannin:
Toward a standard ontology of surgical process models. Int. J. Comput. Assist. Radiol. Surg. 13(9): 1397-1408 (2018) - [j34]Thomas Kirchner, Franz Sattler, Janek Gröhl, Lena Maier-Hein:
Signed Real-Time Delay Multiply and Sum Beamforming for Multispectral Photoacoustic Imaging. J. Imaging 4(10): 121 (2018) - [j33]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics. J. Imaging 4(12): 147 (2018) - [j32]Jianyu Lin, Neil T. Clancy, Ji Qi, Yang Hu, Taran Tatla, Danail Stoyanov, Lena Maier-Hein, Daniel S. Elson:
Dual-modality endoscopic probe for tissue surface shape reconstruction and hyperspectral imaging enabled by deep neural networks. Medical Image Anal. 48: 162-176 (2018) - [j31]