default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDSimon M. Lin
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2021
[j22]Xianlong Zeng
, Simon M. Lin, Chang Liu:
Multi-View Deep Learning Framework for Predicting Patient Expenditure in Healthcare. IEEE Open J. Comput. Soc. 2: 62-71 (2021)- [c28]Xianlong Zeng, Simon M. Lin, Chang Liu:
Transformer-based unsupervised patient representation learning based on medical claims for risk stratification and analysis. BCB 2021: 17:1-17:9 - [c27]Xiang Yue, Xinliang Frederick Zhang, Ziyu Yao, Simon M. Lin, Huan Sun:
CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering. BIBM 2021: 580-587 - [c26]Xinliang Frederick Zhang, Heming Sun, Xiang Yue, Simon M. Lin, Huan Sun:
COUGH: A Challenge Dataset and Models for COVID-19 FAQ Retrieval. EMNLP (1) 2021: 3759-3769 - [i9]Xianlong Zeng, Simon M. Lin, Chang Liu:
Transformer-based unsupervised patient representation learning based on medical claims for risk stratification and analysis. CoRR abs/2106.12658 (2021) - [i8]Xianlong Zeng, Simon M. Lin, Chang Liu:
Pre-training transformer-based framework on large-scale pediatric claims data for downstream population-specific tasks. CoRR abs/2106.13095 (2021) - 2020
- [j21]Xiang Yue, Zhen Wang, Jingong Huang, Srinivasan Parthasarathy, Soheil Moosavinasab, Yungui Huang, Simon M. Lin, Wen Zhang, Ping Zhang, Huan Sun:
Graph embedding on biomedical networks: methods, applications and evaluations. Bioinform. 36(4): 1241-1251 (2020) - [c25]Zhen Wang, Jennifer Lee, Simon M. Lin, Huan Sun:
Rationalizing Medical Relation Prediction from Corpus-level Statistics. ACL 2020: 8078-8092 - [c24]Selasi Attipoe, Yungui Huang, Sharon B. Schweikhart, Jennifer L. Hefner, Daniel M. Walker, Steven W. Rust, Jeffrey Hoffman, Simon M. Lin:
Tasks Associated With Extreme After-hours EHR Use Among Ambulatory Care Pediatricians. AMIA 2020 - [c23]Kaushik Mani, Xiang Yue, Bernal Jimenez Gutierrez, Yungui Huang, Simon M. Lin, Huan Sun:
Clinical Phrase Mining with Language Models. BIBM 2020: 1087-1090 - [c22]Manirupa Das, Juanxi Li, Eric Fosler-Lussier, Simon M. Lin, Steve Rust, Yungui Huang, Rajiv Ramnath:
Sequence-to-Set Semantic Tagging for Complex Query Reformulation and Automated Text Categorization in Biomedical IR using Self-Attention. BioNLP 2020: 14-27 - [c21]Xianlong Zeng, Yunyi Feng, Soheil Moosavinasab, Deborah Lin, Simon M. Lin, Chang Liu:
Multilevel Self-Attention Model and Its Use on Medical Risk Prediction. PSB 2020: 115-126 - [i7]Zhen Wang, Jennifer Lee, Simon M. Lin, Huan Sun:
Rationalizing Medical Relation Prediction from Corpus-level Statistics. CoRR abs/2005.00889 (2020) - [i6]Xinliang Frederick Zhang, Heming Sun, Xiang Yue, Emmett Jesrani, Simon M. Lin, Huan Sun:
COUGH: A Challenge Dataset and Models for COVID-19 FAQ Retrieval. CoRR abs/2010.12800 (2020) - [i5]Xiang Yue, Xinliang Frederick Zhang, Ziyu Yao, Simon M. Lin, Huan Sun:
CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering. CoRR abs/2010.16021 (2020)
2010 – 2019
- 2019
- [j20]Alessandra C. Gasior, Carlos Reck, Victoria Lane, Richard J. Wood, Jeremy Patterson, Robert Strouse, Simon M. Lin, Jennifer N. Cooper, D. Gregory Bates, Marc A. Levitt:
Transcending Dimensions: a Comparative Analysis of Cloaca Imaging in Advancing the Surgeon's Understanding of Complex Anatomy. J. Digit. Imaging 32(5): 761-765 (2019) - [c20]Yunyi Feng, Simon M. Lin, Enju Lin, Lesley Farley, Yungui Huang, Chang Liu:
Identifying Candidates for Medical Coding Audits: Demonstration of a Data Driven Approach to Improve Medicare Severity Diagnosis-Related Group Coding Compliance. HIS 2019: 47-57 - [c19]Zhen Wang, Xiang Yue, Soheil Moosavinasab, Yungui Huang, Simon M. Lin, Huan Sun:
SurfCon: Synonym Discovery on Privacy-Aware Clinical Data. KDD 2019: 1578-1586 - [c18]Zhizhang Hu, Emre Sezgin, Simon M. Lin, Pei Zhang, Hae Young Noh, Shijia Pan:
Device-free Sleep Stage Recognition through Bed Frame Vibration Sensing. DFHS@BuildSys 2019: 39-43 - [i4]Xiang Yue, Zhen Wang, Jingong Huang, Srinivasan Parthasarathy, Soheil Moosavinasab, Yungui Huang, Simon M. Lin, Wen Zhang, Ping Zhang, Huan Sun:
Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations. CoRR abs/1906.05017 (2019) - [i3]Zhen Wang, Xiang Yue, Soheil Moosavinasab, Yungui Huang, Simon M. Lin, Huan Sun:
SurfCon: Synonym Discovery on Privacy-Aware Clinical Data. CoRR abs/1906.09285 (2019) - [i2]Xianlong Zeng, Soheil Moosavinasab, En-Ju D. Lin, Simon M. Lin, Razvan C. Bunescu, Chang Liu:
Distributed representation of patients and its use for medical cost prediction. CoRR abs/1909.07157 (2019) - [i1]Manirupa Das, Juanxi Li, Eric Fosler-Lussier, Simon M. Lin, Soheil Moosavinasab, Steve Rust, Yungui Huang, Rajiv Ramnath:
Sequence-to-Set Semantic Tagging: End-to-End Multi-label Prediction using Neural Attention for Complex Query Reformulation and Automated Text Categorization. CoRR abs/1911.04427 (2019) - 2018
- [c17]Selasi Attipoe, Yungui Huang, Sharon B. Schweikhart, Simon M. Lin:
Variation in After-hours EHR Usage among Ambulatory Care Physicians. AMIA 2018 - [c16]Syed-Amad A. Hussain, Soheil Moosavinasab, Emre Sezgin, Yungui Huang, Simon M. Lin:
Char2Vec: Learning the Semantic Embedding of Rare and Unseen Words in the Biomedical Literature. AMIA 2018 - [c15]Emre Sezgin, Monica Weiler, Anthony Weiler, Simon M. Lin:
A roadmap of transition to health independence: A patient-centered study of self-management and digital-health solutions among teens with chronic conditions. AMIA 2018 - [c14]Xianlong Zeng, Soheil Moosavinasab, Enju Lin, Yungui Huang, Chang Liu, Simon M. Lin:
DeepChild: Hospitalization Prediction via Neural Network. AMIA 2018 - [c13]David Chen, Steve Rust, En-Ju D. Lin, Simon M. Lin, Leslie Nelson, Lindsay Alfano, Linda P. Lowes:
Prediction of Clinical Outcomes of Spinal Muscular Atrophy Using Motion Tracking Data and Elastic Net Regression. BCB 2018: 474-481 - [c12]Manirupa Das, Eric Fosler-Lussier, Simon M. Lin, Soheil Moosavinasab, David Chen, Steve Rust, Yungui Huang, Rajiv Ramnath:
Phrase2VecGLM: Neural generalized language model-based semantic tagging for complex query reformulation in medical IR. BioNLP 2018: 118-128 - 2017
- [j19]Rajeswari Swaminathan, Yungui Huang, Caroline Astbury, Sara Fitzgerald-Butt, Katherine Miller, Justin Cole, Christopher W. Bartlett, Simon M. Lin:
Clinical exome sequencing reports: current informatics practice and future opportunities. J. Am. Medical Informatics Assoc. 24(6): 1184-1191 (2017) - [j18]Wei Chen, Claire Durkin, Yungui Huang, Brent Adler, Steve Rust, Simon M. Lin:
Simplified Readability Metric Drives Improvement of Radiology Reports: an Experiment on Ultrasound Reports at a Pediatric Hospital. J. Digit. Imaging 30(6): 710-717 (2017) - [c11]Tyler Gorham, Steven W. Rust, Jing Yang, James Lin, Richard Hoyt, Swan Bee Liu, Jeffrey Hoffman, Tensing Maa, Yungui Huang, Simon M. Lin:
Vitals Risk Index: A Simplified Pediatric Early Warning Index that Relies Solely on Objective Measures. AMIA 2017 - [c10]Katherine Miller, Rajeswari Swaminathan, Soheil Moosavinasab, Robert Strouse, Matthew Bailey, Yungui Huang, Simon M. Lin:
Genome Dashboard: An Interactive Tool for the Exploration of Human Genomic Variants and Phenotypic Associations. AMIA 2017 - [c9]Emre Sezgin, Koushik Jinna, Tran Bourgeois, Soheil Moosavinasab, Yungui Huang, Simon M. Lin:
DeepSuggest: Query Expansion for Clinical Notes by Deep Learning. AMIA 2017 - [c8]Rajeswari Swaminathan, Yungui Huang, Katherine Miller, Matthew Pastore, Sayaka Hashimoto, Theodora Jacobson, Danielle Mouhlas, Simon M. Lin:
Sharing exome sequencing data between Clinical Sequencing Labs and Healthcare Providers. AMIA 2017 - 2016
- [j17]Soheil Moosavinasab, Jeremy Patterson, Robert Strouse, Majid Rastegar-Mojarad, Kelly Regan, Philip R. O. Payne, Yungui Huang, Simon M. Lin:
'RE: fine drugs': an interactive dashboard to access drug repurposing opportunities. Database J. Biol. Databases Curation 2016 (2016) - [j16]Zhan Ye, Christopher Kadolph, Robert Strenn, Daniel Wall, Elizabeth McPherson, Simon M. Lin:
WHATIF: An open-source desktop application for extraction and management of the incidental findings from next-generation sequencing variant data. Comput. Biol. Medicine 68: 165-169 (2016) - [c7]Wei Chen, Soheil Moosavinasab, Steve Rust, Yungui Huang, Simon M. Lin, Anna Zemke, Ariana Prinzbach:
Evaluation of a Machine Learning Method to Rank PubMed Central Articles For Clinical Relevancy: NCH at TREC 2016 Clinical Decision Support Track. TREC 2016 - 2015
- [j15]Scott J. Hebbring, Majid Rastegar-Mojarad, Zhan Ye, John Mayer, Crystal Jacobson, Simon M. Lin:
Application of clinical text data for phenome-wide association studies (PheWASs). Bioinform. 31(12): 1981-1987 (2015) - [j14]Simon M. Lin, Marco Tomamichel:
Investigating properties of a family of quantum Rényi divergences. Quantum Inf. Process. 14(4): 1501-1512 (2015) - 2014
- [c6]Amy Webb, Aaron Albin, Zhan Ye, Majid Rastegar-Mojarad, Kun Huang, Jeffrey D. Parvin, Wolfgang Sadee, Lang Li, Simon M. Lin, Yang Xiang:
Mining massive SNP data for identifying associated SNPs and uncovering gene relationships. BCB 2014: 304-313 - [c5]Matthew Fredrikson, Eric Lantz, Somesh Jha, Simon M. Lin, David Page, Thomas Ristenpart:
Privacy in Pharmacogenetics: An End-to-End Case Study of Personalized Warfarin Dosing. USENIX Security Symposium 2014: 17-32 - 2013
- [j13]Kai Peng, Wei Xu, Jianyong Zheng, Kegui Huang, Huisong Wang, Jiansong Tong, Zhifeng Lin, Jun Liu, Wenqing Cheng, Dong Fu, Pan Du, Warren A. Kibbe, Simon M. Lin, Tian Xia:
The disease and gene annotations (DGA): an annotation resource for human disease. Nucleic Acids Res. 41(Database-Issue): 553-560 (2013) - [c4]Matthias Samwald, Robert R. Freimuth, Joanne S. Luciano, Simon M. Lin, Robert L. Powers, M. Scott Marshall, Klaus-Peter Adlassnig, Michel Dumontier, Richard D. Boyce:
An RDF/OWL Knowledge Base for Query Answering and Decision Support in Clinical Pharmacogenetics. MedInfo 2013: 539-542 - 2011
- [j12]Pedro Madrigal, Noa Sela, Simon M. Lin:
PLoS Computational Biology Conference Postcards from ISMB/ECCB 2011. PLoS Comput. Biol. 7(11) (2011) - 2010
- [j11]Lihua Julie Zhu, Claude Gazin, Nathan D. Lawson, Hervé Pagès, Simon M. Lin, David S. Lapointe, Michael R. Green:
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data. BMC Bioinform. 11: 237 (2010) - [j10]Pan Du, Xiao Zhang, Chiang-Ching Huang, Nadereh Jafari, Warren A. Kibbe, Lifang Hou, Simon M. Lin:
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinform. 11: 587 (2010)
2000 – 2009
- 2009
- [j9]Pan Du, Gang Feng, Jared Flatow, Jie Song, Michelle Holko, Warren A. Kibbe, Simon M. Lin:
From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations. Bioinform. 25(12) (2009) - 2008
- [j8]Pan Du, Warren A. Kibbe, Simon M. Lin:
lumi: a pipeline for processing Illumina microarray. Bioinform. 24(13): 1547-1548 (2008) - [j7]Pan Du, Simon M. Lin, Mary Qu Yang, Jack Y. Yang:
2009 and beyond: the decade of personalised medicine. Int. J. Comput. Biol. Drug Des. 1(4): 329-333 (2008) - [j6]Chia-Ju Lee, Dong Fu, Pan Du, Hongmei Jiang, Simon M. Lin, Warren A. Kibbe:
A divide-and-conquer strategy to solve the out-of-memory problem of processing thousands of Affymetrix microarrays. Int. J. Comput. Biol. Drug Des. 1(4): 396-405 (2008) - 2007
- [c3]Pan Du, Simon M. Lin, Warren A. Kibbe, Haihui Wang:
Application of Wavelet Transform to the MS-based Proteomics Data Preprocessing. BIBE 2007: 680-686 - 2006
- [j5]Pan Du, Warren A. Kibbe, Simon M. Lin:
Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching. Bioinform. 22(17): 2059-2065 (2006) - 2004
- [j4]Simon M. Lin, Patrick McConnell, Kimberly F. Johnson, Jennifer Shoemaker:
MedlineR: an open source library in R for Medline literature data mining. Bioinform. 20(18): 3659-3661 (2004) - 2002
- [j3]Patrick McConnell, Kimberly F. Johnson, Simon M. Lin:
Applications of Tree-Maps to hierarchical biological data. Bioinform. 18(9): 1278-1279 (2002) - [j2]Nilanjan Dasgupta, Simon M. Lin, Lawrence Carin:
Sequential modeling for identifying CpG island locations in human genome. IEEE Signal Process. Lett. 9(12): 407-409 (2002) - [c2]Xuejun Liao, Nilanjan Dasgupta, Simon M. Lin, Lawrence Carin:
ICA and PLS modeling for functional analysis and drug sensitivity for DNA microarray signals. ICASSP 2002: 3880-3883 - 2001
- [j1]Kimberly F. Johnson, Simon M. Lin:
Critical Assessment of Microarray Data Analysis: the 2001 challenge. Bioinform. 17(9): 857-858 (2001) - [c1]Simon M. Lin, Sumeer Dhar, Rose-Mary N. Boustany:
Extracting knowledge from gene expression data: A case study of Batten Disease. BIOKDD 2001: 2-7
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 21:23 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
