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Andrei Osterman
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2010 – 2019
- 2012
- [j9]Jan Schellenberger, Daniel C. Zielinski
, Wing Choi, Sunthosh Madireddi, Vasiliy Portnoy, David A. Scott
, Jennifer L. Reed, Andrei Osterman, Bernhard Ø. Palsson:
Predicting outcomes of steady-state 13C isotope tracing experiments using Monte Carlo sampling. BMC Syst. Biol. 6: 9 (2012) - [j8]Trang T. Vu, Sergey M. Stolyar, Grigoriy E. Pinchuk, Eric A. Hill
, Leo A. Kucek, Roslyn N. Brown, Mary S. Lipton, Andrei Osterman, Jim K. Fredrickson, Allan E. Konopka, Alexander S. Beliaev, Jennifer L. Reed
:
Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC 51142. PLoS Comput. Biol. 8(4) (2012) - 2011
- [j7]Ying Zhang
, Olga Zagnitko, Irina Rodionova, Andrei Osterman, Adam Godzik
:
The FGGY Carbohydrate Kinase Family: Insights into the Evolution of Functional Specificities. PLoS Comput. Biol. 7(12) (2011) - 2010
- [j6]Grigoriy E. Pinchuk, Eric A. Hill
, Oleg V. Geydebrekht, Jessica De Ingeniis, Xiaolin Zhang
, Andrei Osterman, James H. Scott, Samantha B. Reed, Margaret F. Romine
, Allan E. Konopka, Alexander S. Beliaev, Jim K. Fredrickson, Jennifer L. Reed:
Constraint-Based Model of Shewanella oneidensis MR-1 Metabolism: A Tool for Data Analysis and Hypothesis Generation. PLoS Comput. Biol. 6(6) (2010)
2000 – 2009
- 2009
- [j5]Yoshinobu Igarashi, Emily Heureux, Kutbuddin S. Doctor, Priti Talwar
, Svetlana Gramatikova, Kosi Gramatikoff, Ying Zhang
, Michael L. Blinov
, Salmaz S. Ibragimova, Sarah E. Boyd
, Boris I. Ratnikov, Piotr Cieplak, Adam Godzik
, Jeffrey W. Smith, Andrei Osterman, Alexey M. Eroshkin:
PMAP: databases for analyzing proteolytic events and pathways. Nucleic Acids Res. 37(Database-Issue): 611-618 (2009) - 2007
- [j4]Leslie Klis McNeil, Claudia Reich, Ramy K. Aziz
, Daniela Bartels, Matthew Cohoon, Terry Disz, Robert A. Edwards
, Svetlana Gerdes, Kaitlyn Hwang, Michael Kubal, Gohar Rem Margaryan, Folker Meyer
, William Mihalo, Gary J. Olsen, Robert Olson, Andrei Osterman, Daniel Paarmann, Tobias Paczian, Bruce D. Parrello, Gordon D. Pusch, Dmitry A. Rodionov
, Xinghua Shi, Olga Vassieva, Veronika Vonstein, Olga Zagnitko, Fangfang Xia, Jenifer Zinner, Ross A. Overbeek, Rick Stevens:
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation. Nucleic Acids Res. 35(Database-Issue): 347-353 (2007) - [j3]Yoshinobu Igarashi, Alexey M. Eroshkin, Svetlana Gramatikova, Kosi Gramatikoff, Ying Zhang
, Jeffrey W. Smith, Andrei Osterman, Adam Godzik
:
CutDB: a proteolytic event database. Nucleic Acids Res. 35(Database-Issue): 546-549 (2007) - [c2]Chen Yang, Adam D. Richardson, Jeffrey W. Smith, Andrei Osterman:
Comparative Metabolomics of Breast Cancer. Pacific Symposium on Biocomputing 2007: 181-192 - 2005
- [c1]Yuzhen Ye, Andrei Osterman, Ross A. Overbeek, Adam Godzik
:
Automatic detection of subsystem/pathway variants in genome analysis. ISMB (Supplement of Bioinformatics) 2005: 478-486 - 2003
- [j2]Alexei E. Kazakov, Olga Vassieva, Mikhail S. Gelfand, Andrei Osterman, Ross A. Overbeek:
Bioinformatics classification and functional analysis of PhoH homologs. Silico Biol. 3(1-2): 3-15 (2003) - [j1]Ross A. Overbeek, Niels Larsen, Theresa Walunas, Mark D'Souza, Gordon D. Pusch, Evgeni Selkov Jr., Konstantinos Liolios, Viktor Joukov, Denis Kaznadzey, Iain Anderson, Anamitra Bhattacharyya, Henry Burd, Warren Gardner, Paul Hanke, Vinayak Kapatral, Natalia Mikhailova, Olga Vassieva, Andrei Osterman, Veronika Vonstein, Michael Fonstein, Natalia Ivanova, Nikos Kyrpides
:
The ERGOTM genome analysis and discovery system. Nucleic Acids Res. 31(1): 164-171 (2003)
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