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Neil Swainston
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2020 – today
- 2020
- [j19]Yash Khemchandani, Stephen O'Hagan, Soumitra Samanta, Neil Swainston, Timothy J. Roberts, Danushka Bollegala
, Douglas B. Kell
:
DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach. J. Cheminformatics 12(1): 53 (2020)
2010 – 2019
- 2018
- [j18]Pablo Carbonell
, Jerry Wong, Neil Swainston
, Eriko Takano, Nicholas J. Turner, Nigel S. Scrutton, Douglas B. Kell
, Rainer Breitling, Jean-Loup Faulon
:
Selenzyme: enzyme selection tool for pathway design. Bioinform. 34(12): 2153-2154 (2018) - [j17]Neil Swainston
, Mark Dunstan
, Adrian J. Jervis, Christopher J. Robinson
, Pablo Carbonell
, Alan R. Williams, Jean-Loup Faulon
, Nigel S. Scrutton, Douglas B. Kell
:
PartsGenie: an integrated tool for optimizing and sharing synthetic biology parts. Bioinform. 34(13): 2327-2329 (2018) - 2017
- [j16]Neil Swainston, Andrew Currin, Lucy Green
, Rainer Breitling
, Philip J. Day, Douglas B. Kell
:
CodonGenie: optimised ambiguous codon design tools. PeerJ Comput. Sci. 3: e120 (2017) - [i1]Neil Swainston
, Andrew Currin, Lucy Green, Rainer Breitling
, Philip J. Day
, Douglas B. Kell:
CodonGenie: optimised ambiguous codon design tools. PeerJ Prepr. 5: e2797 (2017) - 2016
- [j15]Neil Swainston
, Janna Hastings
, Adriano Dekker
, Venkatesh Muthukrishnan
, John W. May, Christoph Steinbeck
, Pedro Mendes:
libChEBI: an API for accessing the ChEBI database. J. Cheminformatics 8(1): 11:1-11:6 (2016) - [j14]Janna Hastings
, Gareth I. Owen
, Adriano Dekker
, Marcus Ennis
, Namrata Kale, Venkatesh Muthukrishnan
, Steve Turner, Neil Swainston, Pedro Mendes, Christoph Steinbeck
:
ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res. 44(Database-Issue): 1214-1219 (2016) - 2015
- [c2]Janna Hastings, Neil Swainston, Venkatesh Muthukrishnan, Namrata Kale, Adriano Dekker, Gareth I. Owen, Steve Turner, Pedro Mendes, Christoph Steinbeck:
ChEBI for systems biology and metabolic modelling. ICBO 2015 - 2014
- [j13]Neil Swainston, Andrew Currin, Philip J. Day, Douglas B. Kell
:
GeneGenie: optimized oligomer design for directed evolution. Nucleic Acids Res. 42(Webserver-Issue): 395-400 (2014) - 2013
- [j12]Finja Büchel
, Nicolas Rodriguez
, Neil Swainston, Clemens Wrzodek
, Tobias Czauderna
, Roland Keller, Florian Mittag
, Michael Schubert
, Mihai Glont
, Martin Golebiewski
, Martijn P. van Iersel
, Sarah M. Keating
, Matthias Rall, Michael Wybrow
, Henning Hermjakob
, Michael Hucka
, Douglas B. Kell
, Wolfgang Müller, Pedro Mendes
, Andreas Zell, Claudine Chaouiya
, Julio Saez-Rodriguez
, Falk Schreiber, Camille Laibe
, Andreas Dräger
, Nicolas Le Novère:
Path2Models: large-scale generation of computational models from biochemical pathway maps. BMC Syst. Biol. 7: 116 (2013) - 2012
- [j11]Dave Lee, Kieran Smallbone
, Warwick B. Dunn
, Ettore Murabito, Catherine Winder, Douglas B. Kell
, Pedro Mendes
, Neil Swainston:
Improving metabolic flux predictions using absolute gene expression data. BMC Syst. Biol. 6: 73 (2012) - 2011
- [j10]Ines Thiele
, Daniel R. Hyduke, Benjamin Steeb, Guy Fankam, Douglas K. Allen
, Susanna Bazzani, Pep Charusanti
, Feng-Chi Chen, Ronan M. T. Fleming
, Chao A. Hsiung, Sigrid C. J. De Keersmaecker
, Yu-Chieh Liao
, Kathleen Marchal
, Monica L. Mo, Emre Özdemir
, Anu Raghunathan, Jennifer L. Reed, Sook-Il Shin, Sara Sigurbjörnsdóttir
, Jonas Steinmann, Suresh Sudarsan
, Neil Swainston, Inge M. Thijs, Karsten Zengler
, Bernhard O. Palsson, Joshua N. Adkins
, Dirk Bumann:
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. BMC Syst. Biol. 5: 8 (2011) - [j9]Neil Swainston, Kieran Smallbone
, Pedro Mendes
, Douglas B. Kell
, Norman W. Paton:
The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks. J. Integr. Bioinform. 8(2) (2011) - 2010
- [j8]Peter Li
, Joseph O. Dada
, Daniel Jameson
, Irena Spasic, Neil Swainston, Kathleen Carroll
, Warwick B. Dunn
, Farid Khan, Naglis Malys
, Hanan L. Messiha, Evangelos Simeonidis
, Dieter Weichart, Catherine Winder, Jill Wishart, David S. Broomhead, Carole A. Goble
, Simon J. Gaskell, Douglas B. Kell
, Hans V. Westerhoff
, Pedro Mendes
, Norman W. Paton
:
Systematic integration of experimental data and models in systems biology. BMC Bioinform. 11: 582 (2010) - [j7]Kieran Smallbone
, Evangelos Simeonidis
, Neil Swainston, Pedro Mendes
:
Towards a genome-scale kinetic model of cellular metabolism. BMC Syst. Biol. 4: 6 (2010) - [j6]Karin Radrich, Yoshimasa Tsuruoka
, Paul D. Dobson, Albert Gevorgyan, Neil Swainston, Gino Baart, Jean-Marc Schwartz
:
Integration of metabolic databases for the reconstruction of genome-scale metabolic networks. BMC Syst. Biol. 4: 114 (2010) - [j5]Paul D. Dobson, Kieran Smallbone
, Daniel Jameson
, Evangelos Simeonidis
, Karin Lanthaler, Pinar Pir
, Chuan Lu
, Neil Swainston, Warwick B. Dunn
, Paul Fisher, Duncan Hull
, Marie Brown, Olusegun Oshota, Natalie J. Stanford
, Douglas B. Kell
, Ross D. King
, Stephen G. Oliver, Robert D. Stevens, Pedro Mendes
:
Further developments towards a genome-scale metabolic model of yeast. BMC Syst. Biol. 4: 145 (2010) - [c1]Neil Swainston, Daniel Jameson
, Peter Li, Irena Spasic, Pedro Mendes, Norman W. Paton
:
Integrative Information Management for Systems Biology. DILS 2010: 164-178
2000 – 2009
- 2009
- [j4]Neil Swainston, Pedro Mendes
:
libAnnotationSBML: a library for exploiting SBML annotations. Bioinform. 25(17): 2292-2293 (2009) - [j3]Daniel Jameson
, David A. Turner
, John Ankers, Stephnie Kennedy, Sheila Ryan, Neil Swainston, Tony Griffiths, David G. Spiller
, Stephen G. Oliver, Michael R. H. White
, Douglas B. Kell
, Norman W. Paton
:
Information management for high content live cell imaging. BMC Bioinform. 10 (2009) - 2007
- [j2]Neil Swainston, Jennifer A. Siepen, Andrew R. Jones, Sarah R. Hart, Henning Hermjakob, Philip Jones, Simon J. Hubbard:
Pride Wizard: generation of standards compliant quantitative proteomics data. BMC Syst. Biol. 1(S-1): P27 (2007) - 2006
- [j1]Kevin L. Garwood, Christopher Garwood, Cornelia Hedeler, Tony Griffiths, Neil Swainston, Stephen G. Oliver, Norman W. Paton
:
Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it. BMC Bioinform. 7: 532 (2006)
Coauthor Index
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last updated on 2024-05-08 21:01 CEST by the dblp team
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