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2020 – today
- 2024
[j50]Yulia I. Nussbaum
, K. S. M. Tozammel Hossain, Jussuf T. Kaifi, Wesley C. Warren, Chi-Ren Shyu, Jonathan B. Mitchem:
Identifying gene expression programs in single-cell RNA-seq data using linear correlation explanation. J. Biomed. Informatics 154: 104644 (2024)- 2023
- [j49]Yan Zhuang, Chi-Ren Shyu, Shenda Hong, Pengfei Li, Luxia Zhang:
Self-sovereign identity empowered non-fungible patient tokenization for health information exchange using blockchain technology. Comput. Biol. Medicine 157: 106778 (2023) - [j48]Shu-Kai Chang, Danlu Liu, Jonathan B. Mitchem, Christos Papageorgiou, Jussuf T. Kaifi, Chi-Ren Shyu:
Understanding common key indicators of successful and unsuccessful cancer drug trials using a contrast mining framework on ClinicalTrials.gov. J. Biomed. Informatics 139: 104321 (2023) - [c76]Yu Li, Rana Das, Cuong Duong, Teng-Teeh Lim, Timothy L. Haithcoat, Ilker Ersoy, Chi-Ren Shyu:
Automated Detection of Poultry Farms from Aerial Images for Actionable AI System toward Biosecurity Applications. AIPR 2023: 1-4 - 2022
- [j47]Danlu Liu, Yu Li, William Baskett, Dan Lin, Chi-Ren Shyu:
RHPTree - Risk Hierarchical Pattern Tree for Scalable Long Pattern Mining. ACM Trans. Knowl. Discov. Data 16(4): 63:1-63:33 (2022) - [c75]Erin M. Tallon, Mark Clements, Chi-Ren Shyu:
Found in Translation: Transforming Rules-Based Diabetes Phenotyping Algorithms into Reproducible Diabetes Cohorts from Real-World Data. AMIA 2022 - [c74]Zon-Yin Shae, Kun-Yi Chen, Chi-Yu Chang, Yuan-Yu Tsai, Che-Yi Chou, William Baskett, Chi-Ren Shyu, Jeffrey J. P. Tsai:
Thoughts on Non-IID Data Impact in Healthcare with Federated Learning Medical Blockchain. CogMI 2022: 20-26 - 2021
- [j46]Zainab Al-Taie, Danlu Liu, Jonathan B. Mitchem, Christos Papageorgiou, Jussuf T. Kaifi, Wesley C. Warren, Chi-Ren Shyu:
Explainable artificial intelligence in high-throughput drug repositioning for subgroup stratifications with interventionable potential. J. Biomed. Informatics 118: 103792 (2021) - 2020
- [j45]Olha Kholod, Chi-Ren Shyu, Jonathan B. Mitchem, Jussuf T. Kaifi, Dmitriy Shin:
Identifying patient-specific flow of signal transduction perturbed by multiple single-nucleotide alterations. Quant. Biol. 8(4): 336-346 (2020) - [j44]Danlu Liu, William Baskett, David Q. Beversdorf, Chi-Ren Shyu:
Exploratory Data Mining for Subgroup Cohort Discoveries and Prioritization. IEEE J. Biomed. Health Informatics 24(5): 1456-1468 (2020) - [j43]Yan Zhuang, Lincoln R. Sheets, Yin-Wu Chen, Zonyin Shae, Jeffrey J. P. Tsai, Chi-Ren Shyu:
A Patient-Centric Health Information Exchange Framework Using Blockchain Technology. IEEE J. Biomed. Health Informatics 24(8): 2169-2176 (2020) - [c73]Zainab Al-Taie, Danlu Liu, Christos Papageorgiou, Jussuf T. Kaifi, Jonathan B. Mitchem, Chi-Ren Shyu:
Drug Repositioning for Colorectal Cancer Patient Subgroups Using Exploratory Mining and Network Analysis. AMIA 2020 - [c72]Danlu Liu, Zainab Al-Taie, Yuanyuan Shen, Christos Papageorgiou, Chi-Ren Shyu:
Differentiating Genetic Risk Factors Between Triple Negative and Luminal Breast Cancer Subtypes Using Long Contrast Patterns Mining. AMIA 2020 - [c71]Yuanyuan Shen, Danlu Liu, Chi-Ren Shyu, Jonathan B. Mitchem:
Using novel exploratory subgroup mining to determine complication patterns of post colectomy based on hospital characteristics. AMIA 2020 - [c70]Erin M. Tallon, Mark Clements, Danlu Liu, Katrina Boles, Chi-Ren Shyu:
A Deep Exploratory Mining Approach for Discovering Associations between Family History of Type 1 Diabetes and Autoimmune and Related Conditions. AMIA 2020 - [c69]Yan Zhuang, Lincoln Sheets, Xiyuan Gao, Yuanyuan Shen, Zonyin Shae, Jeffrey J. P. Tsai, Chi-Ren Shyu:
Development of A Blockchain Framework for Virtual Clinical Trials. AMIA 2020
2010 – 2019
- 2019
- [j42]Tim A. Green, Stevan Whitt, Jeffery L. Belden, Sanda Erdelez, Chi-Ren Shyu:
Medical calculators: Prevalence, and barriers to use. Comput. Methods Programs Biomed. 179 (2019) - [j41]Saif S. Khairat, Timothy L. Haithcoat, Songzi Liu, Tanzila Zaman, Barbara Edson, Robert Gianforcaro, Chi-Ren Shyu:
Advancing health equity and access using telemedicine: a geospatial assessment. J. Am. Medical Informatics Assoc. 26(8-9): 796-805 (2019) - [c68]Yan Zhuang, Lincoln Sheets, Zonyin Shae, Yin-Wu Chen, Jeffrey J. P. Tsai, Chi-Ren Shyu:
Applying Blockchain Technology to Enhance Clinical Trial Recruitment. AMIA 2019 - [c67]Yu Li, Carla Allen, Chi-Ren Shyu:
Quantifying and understanding the differences in visual activities with contrast subsequences. ETRA 2019: 42:1-42:5 - [c66]Tim A. Green, Chi-Ren Shyu:
Developing a Taxonomy of Online Medical Calculators for Assessing Automatability and Clinical Efficiency Improvements. MedInfo 2019: 601-605 - [c65]Pericles S. Giannaris, Cynthia Tang, Olha Kholod, Steve Hanson, Chi-Ren Shyu, Richard D. Hammer, Dong Xu, Dmitriy Shin:
Modeling of Contextual Information in Knowledge Graphs of Diagnostic Reports. SWH@ISWC 2019: 20-29 - 2018
- [j40]Matthew Spencer, Nicole Takahashi, Sounak Chakraborty, Judith H. Miles, Chi-Ren Shyu:
Heritable genotype contrast mining reveals novel gene associations specific to autism subgroups. J. Biomed. Informatics 77: 50-61 (2018) - [c64]Timothy L. Haithcoat, Chi-Ren Shyu:
Leveraging Location to Integrate and Access Information for Analyzing Health Context. AMIA 2018 - [c63]Yan Zhuang, Lincoln Sheets, Zonyin Shae, Jeffrey J. P. Tsai, Chi-Ren Shyu:
Applying Blockchain Technology for Health Information Exchange and Persistent Monitoring for Clinical Trials. AMIA 2018 - 2017
- [j39]Lincoln Sheets, Gregory F. Petroski, Yan Zhuang, Michael Phinney, Bin Ge, Jerry C. Parker, Chi-Ren Shyu:
Combining Contrast Mining with Logistic Regression To Predict Healthcare Utilization in a Managed Care Population. Appl. Clin. Inform. 08(02): 430-446 (2017) - [c62]William Baskett, Matthew Spencer, Chi-Ren Shyu:
Efficient GPU-accelerated extraction of imperfect inverted repeats from DNA sequences. BIBM 2017: 516-520 - [c61]Timothy L. Haithcoat, Chi-Ren Shyu:
Geospatial health context table. BIBM 2017: 2244-2246 - [c60]Murugesan Raju, Danlu Liu, Frederick W. Fraunfelder, Chi-Ren Shyu:
Discovering multifactorial associations with the development of age-related cataract using contrast mining. BIBM 2017: 2297-2299 - [c59]Matthew Spencer, Jacob Gotberg, Chi-Ren Shyu:
Quasi-palindrome effects on DNA sequence evolution. BIBM 2017: 2312-2314 - [c58]Yinmiao Ma, Danlu Liu, Grant J. Scott, Jeffrey Uhlmann, Chi-Ren Shyu:
In-Memory Distributed Indexing for Large-Scale Media Data Retrieval. ISM 2017: 232-239 - [c57]Michael A. Phinney, Yan Zhuang, Sean Lander, Lincoln Sheets, Jerry C. Parker, Chi-Ren Shyu:
Contrast Mining for Pattern Discovery and Descriptive Analytics to Tailor Sub-Groups of Patients Using Big Data Solutions. MedInfo 2017: 544-548 - [e1]Xiaohua Hu, Chi-Ren Shyu, Yana Bromberg, Jean Gao, Yang Gong, Dmitry Korkin, Illhoi Yoo, Huiru Jane Zheng:
2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017, Kansas City, MO, USA, November 13-16, 2017. IEEE Computer Society 2017, ISBN 978-1-5090-3050-7 [contents] - 2016
- [j38]Xingyan Kuang, Andi Dhroso, Jing Ginger Han, Chi-Ren Shyu, Dmitry Korkin:
DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions. Database J. Biol. Databases Curation 2016 (2016) - [j37]Hongfei Cao, Michael Phinney, Devin Petersohn, Benjamin Merideth, Chi-Ren Shyu:
Mining large-scale repetitive sequences in a MapReduce setting. Int. J. Data Min. Bioinform. 14(3): 210-228 (2016) - [j36]Hongfei Cao, Yu Li, Carla M. Allen, Michael A. Phinney, Chi-Ren Shyu:
Visual Reasoning Indexing and Retrieval Using In-Memory Computing. Int. J. Semantic Comput. 10(3): 299-322 (2016) - [j35]Nicholas R. Smith, Luis A. Rivera, Maria Dietrich, Chi-Ren Shyu, Matthew P. Page, Guilherme N. DeSouza:
Detection of Simulated Vocal Dysfunctions Using Complex sEMG Patterns. IEEE J. Biomed. Health Informatics 20(3): 787-801 (2016) - [c56]Pericles S. Giannaris, Zainab Al-Taie, Nattaphon Thanintorn, Ilker Ersoy, Chi-Ren Shyu, Richard D. Hammer, Dmitriy Shin:
RDF-Based Method to Uncover Implicit Health Communication Episodes from Unstructured Healthcare Data. AMIA 2016 - [c55]Tim A. Green, Michael A. Phinney, Chi-Ren Shyu:
Automatic Workflow Extraction Using Sequential Pattern Mining and Electronic Medical Record Usage Data. AMIA 2016 - [c54]Matthew Spencer, Chi-Ren Shyu:
Contrasting Autism Subgroup Genotypes Using Frequent Pattern Mining. AMIA 2016 - [c53]Chi-Ren Shyu:
Semi-hypothesis guided exploratory analysis for biomedical applications. BIBM 2016: 9 - [c52]William Baskett, Matthew Spencer, Chi-Ren Shyu:
Large scale extraction of perfect and imperfect DNA palindromes using in-memory computing. BIBM 2016: 850-857 - [c51]Michael Phinney, Sean Lander, Matthew Spencer, Chi-Ren Shyu:
Cartesian Operations on Distributed Datasets Using Virtual Partitioning. BigDataService 2016: 1-9 - [c50]Hongfei Cao, Yu Li, Carla M. Allen, Michael A. Phinney, Chi-Ren Shyu:
Visual Reasoning Indexing and Retrieval Using In-memory Computing. BigMM 2016: 17-24 - 2015
- [j34]Lawrence Wing-Chi Chan, Bin Pang, Chi-Ren Shyu, Tao Chan, Pek-Lan Khong:
Genetic algorithm supported by graphical processing unit improves the exploration of effective connectivity in functional brain imaging. Frontiers Comput. Neurosci. 9: 50 (2015) - [j33]Lawrence Wing-Chi Chan, Ying Liu, Tao Chan, Helen K. W. Law, S. C. Cesar Wong, Andy Yeung, K. F. Lo, S. W. Yeung, K. Y. Kwok, William Chan, Thomas Lau, Chi-Ren Shyu:
PubMed-supported clinical term weighting approach for improving inter-patient similarity measure in diagnosis prediction. BMC Medical Informatics Decis. Mak. 15: 43 (2015) - [j32]Bin Pang, David Schlessman, Xingyan Kuang, Nan Zhao, Daniel Shyu, Dmitry Korkin, Chi-Ren Shyu:
An Integrated Approach to Sequence-Independent Local Alignment of Protein Binding Sites. IEEE ACM Trans. Comput. Biol. Bioinform. 12(2): 298-308 (2015) - [c49]Tim A. Green, Chi-Ren Shyu:
Integrated Clinical Decision Support Systems: Systematic Review and Classification of Online Medical Calculators. AMIA 2015 - [c48]Lincoln Sheets, Michael A. Phinney, Sean Lander, Jerry C. Parker, Chi-Ren Shyu:
Data Mining to Predict Healthcare Utilization in Managed Care Patients. AMIA 2015 - [c47]Devin Petersohn, Matthew Spencer, Alex Fratila, Chi-Ren Shyu:
Large scale multi-species palindrome study using distributed in-memory computing. BIBM 2015: 685-690 - 2014
- [j31]Dmitriy Shin, Gerald C. Arthur, Mihail Popescu, Dmitry Korkin, Chi-Ren Shyu:
Uncovering influence links in molecular knowledge networks to streamline personalized medicine. J. Biomed. Informatics 52: 394-405 (2014) - [j30]Nan Zhao, Jing Ginger Han, Chi-Ren Shyu, Dmitry Korkin:
Determining Effects of Non-synonymous SNPs on Protein-Protein Interactions using Supervised and Semi-supervised Learning. PLoS Comput. Biol. 10(5) (2014) - [c46]Hongfei Cao, Michael Phinney, Devin Petersohn, Benjamin Merideth, Chi-Ren Shyu:
MRSMRS: Mining repetitive sequences in a MapReduce setting. BIBM 2014: 463-470 - [c45]Nicholas R. Smith, Teekayu Klongtruagrok, Guilherme N. DeSouza, Chi-Ren Shyu, Maria Dietrich, Matthew P. Page:
Non-invasive ambulatory monitoring of complex sEMG patterns and its potential application in the detection of vocal dysfunctions. Healthcom 2014: 447-452 - 2013
- [j29]Adrian S. Barb, Roy B. Clariana, Chi-Ren Shyu:
Applications of PathFinder Network Scaling for Improving the Ranking of Satellite Images. IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens. 6(3): 1092-1099 (2013) - [c44]Hongfei Cao, Jing Ginger Han, Chi-Ren Shyu:
Object behavior mining from mitochondiral shape databases for degenerated nerve disease studies. BIBM 2013: 7-9 - [c43]Bin Pang, David Schlessman, Xingyan Kuang, Nan Zhao, Daniel Shyu, Dmitry Korkin, Chi-Ren Shyu:
PBSalign: Sequence-independent local alignment of protein binding sites. BIBM 2013: 35-42 - [c42]Michael Phinney, Hongfei Cao, Andi Dhroso, Chi-Ren Shyu:
Mining repetitive sequences using a big data ecosystem. BIBM 2013: 60-62 - [c41]Guannan Lu, Guilherme N. DeSouza, Jane Armer, Blake Anderson, Chi-Ren Shyu:
A system for limb-volume measurement using 3D models from an infrared depth sensor. CICARE 2013: 64-69 - [c40]Mirna Becevic, Blake Anderson, Jing Ginger Han, E. Rachel Mutrux, Lanis Hicks, Karen Edison, Chi-Ren Shyu:
TeleMDID: Mobile technology applications for interactive diagnoses in teledermatology clinics. Healthcom 2013: 429-433 - [c39]Guannan Lu, Guilherme N. DeSouza, Jane Armer, Chi-Ren Shyu:
Comparing limb-volume measurement techniques: 3D models from an infrared depth sensor versus water displacement. Healthcom 2013: 685-691 - [c38]Lawrence Wing-Chi Chan, Bin Pang, Chi-Ren Shyu, Tao Chan, Pek-Lan Khong:
Fast GPU Algorithm for Analyzing Effective Connectivity in Functional Brain Imaging. ICONS 2013: 349-352 - 2012
- [j28]Bin Pang, Nan Zhao, Dmitry Korkin, Chi-Ren Shyu:
Fast protein binding site comparisons using visual words representation. Bioinform. 28(10): 1345-1352 (2012) - [j27]Xin Wang, Sanda Erdelez, Carla Allen, Blake Anderson, Hongfei Cao, Chi-Ren Shyu:
Role of domain knowledge in developing user-centered medical-image indexing. J. Assoc. Inf. Sci. Technol. 63(2): 225-241 (2012) - [j26]Xingyan Kuang, Jing Ginger Han, Nan Zhao, Bin Pang, Chi-Ren Shyu, Dmitry Korkin:
DOMMINO: a database of macromolecular interactions. Nucleic Acids Res. 40(Database-Issue): 501-506 (2012) - [j25]Bin Pang, Xingyan Kuang, Nan Zhao, Dmitry Korkin, Chi-Ren Shyu:
PBSword: a web server for searching similar protein-protein binding sites. Nucleic Acids Res. 40(Web-Server-Issue): 428-434 (2012) - [j24]Matthew N. Klaric, Grant J. Scott, Chi-Ren Shyu:
Multi-Index Multi-Object Content-Based Retrieval. IEEE Trans. Geosci. Remote. Sens. 50(10): 4036-4049 (2012) - [c37]Jing Han, Xin Wang, Blake Anderson, Jonathan Dyer, Chi-Ren Shyu:
A Study of Dermatological Image Search, Archive, and Use Behaviors. AMIA 2012 - [c36]Marius Petruc, Mihail Popescu, John L. Fresen, Dmitriy Shin, Chi-Ren Shyu:
Quantifying the quality of imaging interpretations. AMIA 2012 - [c35]Christine Shuyu Xu, Blake Anderson, Jane Armer, Chi-Ren Shyu:
Improving disease management through a mobile application for lymphedema patients. Healthcom 2012: 286-291 - [c34]Adrian S. Barb, Chi-Ren Shyu:
Associative semantic ranking of satellite images using PathFinder Network Scaling ensemble methods. IGARSS 2012: 5289-5292 - 2011
- [j23]Jason M. Green, Jaturon Harnsomburana, Mary L. Schaeffer, Carolyn J. Lawrence, Chi-Ren Shyu:
Multi-source and ontology-based retrieval engine for maize mutant phenotypes. Database J. Biol. Databases Curation 2011 (2011) - [j22]Jaturon Harnsomburana, Jason M. Green, Adrian S. Barb, Mary L. Schaeffer, Leszek Vincent, Chi-Ren Shyu:
Computable visually observed phenotype ontological framework for plants. BMC Bioinform. 12: 260 (2011) - [j21]Lawrence Wing-Chi Chan, Ying Liu, Chi-Ren Shyu, Iris F. F. Benzie:
A SNOMED supported ontological vector model for subclinical disorder detection using EHR similarity. Eng. Appl. Artif. Intell. 24(8): 1398-1409 (2011) - [j20]Grant J. Scott, Matthew N. Klaric, Curt H. Davis, Chi-Ren Shyu:
Entropy-Balanced Bitmap Tree for Shape-Based Object Retrieval From Large-Scale Satellite Imagery Databases. IEEE Trans. Geosci. Remote. Sens. 49(5): 1603-1616 (2011) - [c33]Xin Wang, Sanda Erdelez, Yunhui Lu, Carla Allen, Blake Anderson, Hongfei Cao, Chi-Ren Shyu:
Search tactics for medical image retrieval. ASIST 2011: 1-4 - [c32]Xin Wang, Sanda Erdelez, Carla Allen, Blake Anderson, Hongfei Cao, Chi-Ren Shyu:
Medical image describing behavior: a comparison between an expert and novice. iConference 2011: 792-793 - 2010
- [j19]Adrian S. Barb, Chi-Ren Shyu:
Visual-Semantic Modeling in Content-Based Geospatial Information Retrieval Using Associative Mining Techniques. IEEE Geosci. Remote. Sens. Lett. 7(1): 38-42 (2010) - [j18]Chi-Ren Shyu, Bin Pang, Pin-Hao Chi, Nan Zhao, Dmitry Korkin, Dong Xu:
ProteinDBS v2.0: a web server for global and local protein structure search. Nucleic Acids Res. 38(Web-Server-Issue): 53-58 (2010) - [c31]Nan Zhao, Bin Pang, Chi-Ren Shyu, Dmitry Korkin:
An accurate classification of native and non-native protein-protein interactions using supervised and semi-supervised learning approaches. BIBM 2010: 185-189 - [c30]Jing Han, Dmitriy V. Shin, Gerald L. Arthur, Chi-Ren Shyu:
Multi-resolution tile-based follicle detection using color and textural information of follicular lymphoma IHC slides. BIBM Workshops 2010: 866-867 - [c29]Matt Klaric, Grant J. Scott, Chi-Ren Shyu:
Progressive spatial clustering of content-based satellite imagery retrieval results. IGARSS 2010: 36-39 - [c28]Adrian S. Barb, Chi-Ren Shyu:
Visual information mining and ranking using graded relevance assessments in satellite image databases. IGARSS 2010: 3398-3401
2000 – 2009
- 2009
- [j17]Pin-Hao Chi, Bin Pang, Dmitry Korkin, Chi-Ren Shyu:
Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments. Bioinform. 25(19): 2559-2565 (2009) - [j16]Ying Liu, Lawrence Wing-Chi Chan, Chi-Ren Shyu, Ying Liu:
Editorial for the special issue of knowledge discovery and management in biomedical information systems. Inf. Syst. Frontiers 11(4): 345-347 (2009) - [j15]Laritza M. Taft, R. Scott Evans, Chi-Ren Shyu, Marlene J. Egger, Nitesh V. Chawla, Joyce A. Mitchell, Sidney N. Thornton, Bruce E. Bray, Michael W. Varner:
Countering imbalanced datasets to improve adverse drug event predictive models in labor and delivery. J. Biomed. Informatics 42(2): 356-364 (2009) - 2008
- [j14]Wu He, Sanda Erdelez, Feng-Kwei Wang, Chi-Ren Shyu:
The effects of conceptual description and search practice on users' mental models and information seeking in a case-based reasoning retrieval system. Inf. Process. Manag. 44(1): 294-309 (2008) - [c27]Ozy Sjahputera, Curt H. Davis, Brian C. Claywell, Nicholas J. Hudson, James M. Keller, Michael G. Vincent, Yonghong Li, Matthew N. Klaric, Chi-Ren Shyu:
GeoCDX: An Automated Change Detection & Exploitation System for High Resolution Satelite Imagery. IGARSS (5) 2008: 467-470 - [c26]Adrian S. Barb, Chi-Ren Shyu:
Ontology Driven Content Mining and Semantic Queries for Satellite Image Databases. IGARSS (3) 2008: 503-506 - 2007
- [j13]Chi-Ren Shyu, Jaturon Harnsomburana, Jason M. Green, Adrian S. Barb, Toni Kazic, Mary L. Schaeffer, Edward H. Coe:
Searching and Mining Visually Observed Phenotypes of maize Mutants. J. Bioinform. Comput. Biol. 5(6): 1193-1213 (2007) - [j12]Chi-Ren Shyu, Jason M. Green, Daniel Pak-Kong Lun, Toni Kazic, Mary L. Schaeffer, Ed Coe:
Image Analysis for Mapping Immeasurable Phenotypes in Maize [Life Sciences]. IEEE Signal Process. Mag. 24(3): 115-118 (2007) - [j11]Chi-Ren Shyu, Matthew N. Klaric, Grant J. Scott, Adrian S. Barb, Curt H. Davis, Kannappan Palaniappan:
GeoIRIS: Geospatial Information Retrieval and Indexing System - Content Mining, Semantics Modeling, and Complex Queries. IEEE Trans. Geosci. Remote. Sens. 45(4): 839-852 (2007) - [j10]Grant J. Scott, Chi-Ren Shyu:
Knowledge-Driven Multidimensional Indexing Structure for Biomedical Media Database Retrieval. IEEE Trans. Inf. Technol. Biomed. 11(3): 320-331 (2007) - [c25]Adrian S. Barb, Chi-Ren Shyu:
User-specific semantics for modeling content-based geospatial knowledge. IGARSS 2007: 330-333 - 2006
- [j9]Pin-Hao Chi, Chi-Ren Shyu, Dong Xu:
A fast SCOP fold classification system using content-based E-Predict algorithm. BMC Bioinform. 7: 362 (2006) - [c24]Tetsuya Kobayashi, Chi-Ren Shyu:
Representing Clinical Questions by Semantic Type for Better Classification. AMIA 2006 - [c23]Wannapa Kay Mahamaneerat, Chi-Ren Shyu:
Knowledge Discovery using Domain-Concept Mining Approach for the Behavioral Risk Factor Surveillance System (BRFSS) Data. AMIA 2006 - [c22]Jeff Reneker, Chi-Ren Shyu:
Applying Sequential Forward Floating Selection to Protein Structure Prediction with a Study of HIV-1 RP. AMIA 2006 - [c21]Christopher M. Topinka, Chi-Ren Shyu:
Predicting Cancer Interaction Networks Using Text-Mining and Structure Understanding. AMIA 2006 - [c20]Pin-Hao Chi, Chi-Ren Shyu:
Predicting Ranked SCOP Domains by Mining Associations of Visual Contents in Distance Matrices. APBC 2006: 49-58 - [c19]Chi-Ren Shyu, Matthew N. Klaric, Grant J. Scott, Wannapa Kay Mahamaneerat:
Knowledge Discovery by Mining Association Rules and Temporal-Spatial Information from Large-Scale Geospatial Image Databases. IGARSS 2006: 17-20 - [c18]Matthew N. Klaric, Grant J. Scott, Chi-Ren Shyu:
Mining Visual Associations from User Feedback for Weighting Multiple Indexes in Geospatial Image Retrieval. IGARSS 2006: 21-24 - [c17]Matthew Klaric, Grant J. Scott, Chi-Ren Shyu, Curt H. Davis, Kannappan Palaniappan:
A Framework for Geospatial Satellite Imagery Retrieval Systems. IGARSS 2006: 2457-2460 - [c16]Brian C. Claywell, Curt H. Davis, Chi-Ren Shyu:
Fusion of Spectral and Spatial Information for Automated Change Detection in High Resolution Satellite Imagery. IGARSS 2006: 2510-2513 - 2005
- [j8]Jeff Reneker, Chi-Ren Shyu:
Refined repetitive sequence searches utilizing a fast hash function and cross species information retrievals. BMC Bioinform. 6: 111 (2005) - [j7]Pin-Hao Chi, Grant J. Scott, Chi-Ren Shyu:
A Fast Protein Structure Retrieval System Using Image-Based Distance Matrices and Multidimensional Index. Int. J. Softw. Eng. Knowl. Eng. 15(3): 527-546 (2005) - [j6]Adrian S. Barb, Chi-Ren Shyu, Yash Sethi:
Knowledge representation and sharing using visual semantic modeling for diagnostic medical image databases. IEEE Trans. Inf. Technol. Biomed. 9(4): 538-553 (2005) - [c15]Grant J. Scott, Matt Klaric, Chi-Ren Shyu:
Modeling Multi-object Spatial Relationships for Satellite Image Database Indexing and Retrieval. CIVR 2005: 247-256 - [c14]Matthew N. Klaric, Grant J. Scott, Chi-Ren Shyu, Curt H. Davis:
Automated object extraction through simplification of the differential morphological profile for high-resolution satellite imagery. IGARSS 2005: 1265-1268 - [c13]Chi-Ren Shyu, Adrian S. Barb, Curt H. Davis:
Mining image content associations for visual semantic modeling in geospatial information indexing and retrieval. IGARSS 2005: 5622-5625 - 2004
- [j5]Chi-Ren Shyu, Pin-Hao Chi, Grant J. Scott, Dong Xu:
ProteinDBS: a real-time retrieval system for protein structure comparison. Nucleic Acids Res. 32(Web-Server-Issue): 572-575 (2004) - [j4]Jeff Reneker, Chi-Ren Shyu, Peiyu Zeng, Joseph C. Polacco, Walter Gassmann:
ACMES: fast multiple-genome searches for short repeat sequences with concurrent cross-species information retrieval. Nucleic Acids Res. 32(Web-Server-Issue): 649-653 (2004) - [c12]Adrian S. Barb, Chi-Ren Shyu, Yash Sethi:
Semantic Integration and Knowledge Exchange for Diagnostic Medical Image Databases. BIBE 2004: 175-182 - [c11]Pin-Hao Chi, Grant J. Scott, Chi-Ren Shyu:
A Fast Protein Structure Retrieval System Using Image-Based Distance Matrices and Multidimensional Index. BIBE 2004: 522-532 - 2003
- [j3]Toni Kazic, Edward H. Coe, Mary L. Polacco, Chi-Ren Shyu:
Whither Biological Database Research? OMICS 7(1): 61-66 (2003) - [c10]Grant J. Scott, Chi-Ren Shyu:
EBS k-d Tree: An Entropy Balanced Statistical k-d Tree for Image Databases with Ground-Truth Labels. CIVR 2003: 467-476 - [c9]Adrian S. Barb, Chi-Ren Shyu:
Semantics modeling in diagnostic medical image databases using customized fuzzy membership functions. FUZZ-IEEE 2003: 1159-1164 - 2002
- [j2]Chi-Ren Shyu, Christina Pavlopoulou, Avinash C. Kak, Carla E. Brodley, Lynn S. Broderick:
Using Human Perceptual Categories for Content-Based Retrieval from a Medical Image Database. Comput. Vis. Image Underst. 88(3): 119-151 (2002) - [c8]Jaturon Harnsomburana, Chi-Ren Shyu:
A Hybrid Tree Approach for Efficient Image Database Retrieval with Dynamic Feedback. ICPR (1) 2002: 263-266 - [c7]Chi-Ren Shyu, Seth A. Havermann, Kristopher Stice, Georgia L. Davis:
RFLPRetriever: a content-based retrieval system for biological image databases. Storage and Retrieval for Media Databases 2002: 98-105 - 2001
- [c6]Chi-Ren Shyu, Pascal Matsakis:
Spatial Lesion Indexing for Medical Image Databases Using Force Histograms. CVPR (2) 2001: 603-608 - 2000
- [c5]Chi-Ren Shyu, Avinash C. Kak, Carla E. Brodley, Christina Pavlopoulou, M. F. Chyan, Lynn S. Broderick:
A Web-Based CBIR-Assisted Learning Tool for Radiology Education - Anytime and Anyplace. IEEE International Conference on Multimedia and Expo (I) 2000: 23-26
1990 – 1999
- 1999
- [j1]Chi-Ren Shyu, Carla E. Brodley, Avinash C. Kak, Akio Kosaka, Alex M. Aisen, Lynn S. Broderick:
ASSERT: A Physician-in-the-Loop Content-Based Retrieval System for HRCT Image Databases. Comput. Vis. Image Underst. 75(1-2): 111-132 (1999) - [c4]Carla E. Brodley, Avinash C. Kak, Chi-Ren Shyu, Jennifer G. Dy, Lynn S. Broderick, Alex M. Aisen:
Content-Based Retrieval from Medical Image Databases: A Synergy of Human Interaction, Machine Learning and Computer Vision. AAAI/IAAI 1999: 760-767 - [c3]Jennifer G. Dy, Carla E. Brodley, Avinash C. Kak, Chi-Ren Shyu, Lynn S. Broderick:
The Customized-Queries Approach to CBIR Using EM. CVPR 1999: 2400-2406 - [c2]Jennifer G. Dy, Carla E. Brodley, Avinash C. Kak, Chi-Ren Shyu, Lynn S. Broderick:
Customized-queries approach to CBIR. Storage and Retrieval for Image and Video Databases (SPIE) 1999: 22-32 - [c1]Chi-Ren Shyu, T. Tony Cai, Lynn S. Broderick:
Archiving and retrieval of sequential images from tomographic databases in PACS. Storage and Retrieval for Image and Video Databases (SPIE) 1999: 33-40
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Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
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Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
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Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
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OpenAlex data
Load additional information about publications from 
.
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last updated on 2024-10-07 21:17 CEST by the dblp team
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