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Todd W. Harris
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2020 – today
- 2020
- [j20]Julie Agapite, Laurent-Philippe Albou
, Suzi A. Aleksander
, Joanna Argasinska
, Valerio Arnaboldi
, Helen Attrill, Susan M. Bello, Judith A. Blake, Olin Blodgett, Yvonne M. Bradford, Carol J. Bult, Scott Cain, Brian R. Calvi, Seth Carbon, Juancarlos Chan, Wen J. Chen, J. Michael Cherry
, Jae-Hyoung Cho, Karen R. Christie, Madeline A. Crosby, Jeff de Pons, Mary E. Dolan, Gilberto dos Santos, Barbara Dunn, Nathan A. Dunn, Anne E. Eagle, Dustin Ebert, Stacia R. Engel, David Fashena, Ken Frazer, Sibyl Gao, Felix Gondwe, Joshua L. Goodman, L. Sian Gramates, Christian A. Grove, Todd W. Harris, Marie-Claire Harrison
, Douglas G. Howe, Kevin L. Howe
, Sagar Jha, James A. Kadin, Thomas C. Kaufman, Patrick Kalita, Kalpana Karra, Ranjana Kishore, Stanley J. F. Laulederkind, Raymond Y. N. Lee, Kevin A. MacPherson, Steven J. Marygold, Beverley Matthews, Gillian H. Millburn, Stuart R. Miyasato, Sierra A. T. Moxon, Hans-Michael Müller, Christopher J. Mungall, Anushya Muruganujan, Tremayne Mushayahama, Robert S. Nash, Patrick Ng, Michael Paulini
, Norbert Perrimon, Christian Pich, Daniela Raciti, Joel E. Richardson, Matthew Russell, Susan Russo Gelbart, Leyla Ruzicka, Kevin Schaper, Mary Shimoyama, Matt Simison, Cynthia L. Smith, David R. Shaw, Ajay Shrivatsav, Marek S. Skrzypek, Jennifer R. Smith, Paul W. Sternberg, Christopher J. Tabone, Paul D. Thomas
, Jyothi Thota, Sabrina Toro, Monika Tomczuk, Marek Tutaj, Monika Tutaj, Jose-Maria Urbano
, Kimberly Van Auken, Ceri E. Van Slyke, Shur-Jen Wang, Shuai Weng, Monte Westerfield, Gary Williams, Edith D. Wong, Adam Wright, Karen Yook:
Alliance of Genome Resources Portal: unified model organism research platform. Nucleic Acids Res. 48(Database-Issue): D650-D658 (2020) - [j19]Todd W. Harris
, Valerio Arnaboldi, Scott Cain, Juancarlos Chan, Wen J. Chen, Jae-Hyoung Cho, Paul Davis
, Sibyl Gao, Christian A. Grove
, Ranjana Kishore, Raymond Y. N. Lee, Hans-Michael Müller, Cecilia Nakamura, Paulo A. S. Nuin, Michael Paulini
, Daniela Raciti
, Faye Rodgers
, Matthew Russell
, Gary Schindelman, Kimberly Van Auken, Qinghua Wang, Gary Williams, Adam Wright, Karen Yook, Kevin L. Howe
, Tim Schedl, Lincoln Stein, Paul W. Sternberg:
WormBase: a modern Model Organism Information Resource. Nucleic Acids Res. 48(Database-Issue): D762-D767 (2020)
2010 – 2019
- 2018
- [j18]Daniela Raciti
, Karen Yook, Todd W. Harris, Tim Schedl, Paul W. Sternberg:
Micropublication: incentivizing community curation and placing unpublished data into the public domain. Database J. Biol. Databases Curation 2018: bay013 (2018) - [j17]Raymond Y. N. Lee
, Kevin L. Howe
, Todd W. Harris
, Valerio Arnaboldi
, Scott Cain, Juancarlos Chan, Wen J. Chen, Paul Davis
, Sibyl Gao, Christian A. Grove, Ranjana Kishore, Hans-Michael Müller, Cecilia Nakamura, Paulo A. S. Nuin, Michael Paulini
, Daniela Raciti
, Faye Rodgers
, Matthew Russell, Gary Schindelman, Mary Ann Tuli, Kimberly Van Auken, Qinghua Wang, Gary Williams, Adam Wright, Karen Yook, Matthew Berriman, Paul J. Kersey
, Tim Schedl, Lincoln Stein, Paul W. Sternberg:
WormBase 2017: molting into a new stage. Nucleic Acids Res. 46(Database-Issue): D869-D874 (2018) - 2016
- [j16]Kevin L. Howe
, Bruce J. Bolt
, Scott Cain, Juancarlos Chan, Wen J. Chen, Paul Davis
, James Done, Thomas A. Down, Sibyl Gao, Christian A. Grove, Todd W. Harris
, Ranjana Kishore, Raymond Y. N. Lee, Jane Lomax
, Yuling Li, Hans-Michael Müller, Cecilia Nakamura, Paulo A. S. Nuin, Michael Paulini, Daniela Raciti
, Gary Schindelman, Eleanor Stanley, Mary Ann Tuli, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, Adam Wright, Karen Yook, Matthew Berriman
, Paul J. Kersey
, Tim Schedl, Lincoln Stein, Paul W. Sternberg:
WormBase 2016: expanding to enable helminth genomic research. Nucleic Acids Res. 44(Database-Issue): 774-780 (2016) - 2015
- [j15]Damian Smedley, Syed Haider, Steffen Durinck, Luca Pandini, Paolo Provero, James E. Allen
, Olivier Arnaiz
, Mohammad Hamza Awedh
, Richard A. Baldock
, Giulia Barbiera, Philippe Bardou
, Tim Beck
, Andrew Blake
, Merideth Bonierbale, Anthony J. Brookes, Gabriele Bucci
, Iwan Buetti, Sarah W. Burge
, Cédric Cabau, Joseph W. Carlson, Claude Chelala
, Charalambos Chrysostomou, Davide Cittaro
, Olivier Collin
, Raul Cordova, Rosalind J. Cutts, Erik Dassi
, Alex Di Génova
, Anis Djari, Anthony Esposito, Heather Estrella, Eduardo Eyras
, Julio Fernandez-Banet
, Simon A. Forbes, Robert C. Free
, Takatomo Fujisawa, Emanuela Gadaleta, Jose M. Garcia-Manteiga, David M. Goodstein
, Kristian A. Gray, José Afonso Guerra-Assunção
, Bernard Haggarty, Dongjin Han, Byungwoo Han, Todd W. Harris, Jayson Harshbarger, Robert K. Hastings
, Richard D. Hayes
, Claire Hoede
, Shen Hu, Zhi-Liang Hu, Lucie N. Hutchins, Zhengyan Kan, Hideya Kawaji
, Aminah-Olivia Keliet, Arnaud Kerhornou, Sunghoon Kim
, Rhoda Kinsella, Christophe Klopp
, Lei Kong, Daniel Lawson
, Dejan Lazarevic
, Ji-Hyun Lee, Thomas Letellier, Chuan-Yun Li, Pietro Liò
, Chu-Jun Liu, Jie Luo, Alejandro Maass
, Jérôme Mariette, Thomas Maurel
, Stefania Merella, Azza Mostafa Mohamed, François Moreews
, Nabihoudine Ibouniyamine, Nelson Ndegwa
, Céline Noirot, Christian Perez-Llamas, Michael Primig
, Alessandro Quattrone
, Hadi Quesneville
, Davide Rambaldi, James M. Reecy
, Michela Riba
, Steven Rosanoff
, Amna Ali Saddiq
, Elisa Salas
, Olivier Sallou, Rebecca Shepherd, Reinhard Simon
, Linda Sperling
, William Spooner, Daniel M. Staines
, Delphine Steinbach, Kevin R. Stone, Elia Stupka, Jon W. Teague, Abu Z. Dayem Ullah, Jun Wang, Doreen Ware, Marie Wong-Erasmus, Ken Youens-Clark, Amonida Zadissa
, Shi-Jian Zhang, Arek Kasprzyk:
The BioMart community portal: an innovative alternative to large, centralized data repositories. Nucleic Acids Res. 43(Webserver-Issue): W589-W598 (2015) - 2014
- [j14]Todd W. Harris
, Joachim Baran, Tamberlyn Bieri, Abigail Cabunoc
, Juancarlos Chan, Wen J. Chen, Paul Davis, James Done, Christian A. Grove
, Kevin L. Howe
, Ranjana Kishore, Raymond Y. N. Lee, Yuling Li, Hans-Michael Müller, Cecilia Nakamura, Philip Ozersky, Michael Paulini, Daniela Raciti
, Gary Schindelman, Mary Ann Tuli, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, J. D. Wong, Karen Yook, Tim Schedl, Jonathan Hodgkin, Matthew Berriman
, Paul J. Kersey
, John Spieth, Lincoln Stein, Paul W. Sternberg:
WormBase 2014: new views of curated biology. Nucleic Acids Res. 42(Database-Issue): 789-793 (2014) - 2012
- [j13]Jason E. Stajich
, Todd W. Harris
, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb
, Jessica C. Kissinger
, Wei Li, Vishal Nayak
, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos
:
FungiDB: an integrated functional genomics database for fungi. Nucleic Acids Res. 40(Database-Issue): 675-681 (2012) - [j12]Karen Yook
, Todd W. Harris
, Tamberlyn Bieri, Abigail Cabunoc
, Juancarlos Chan, Wen J. Chen, Paul Davis
, Norie De La Cruz, Adrian Duong, Ruihua Fang, Uma Ganesan, Christian A. Grove
, Kevin L. Howe
, Snehalata Kadam, Ranjana Kishore, Raymond Y. N. Lee, Yuling Li, Hans-Michael Müller, Cecilia Nakamura, Bill Nash, Philip Ozersky, Michael Paulini
, Daniela Raciti
, Arun Rangarajan, Gary Schindelman, Xiaoqi Shi, Erich M. Schwarz
, Mary Ann Tuli
, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, Jonathan Hodgkin, Matthew Berriman
, Richard Durbin
, Paul J. Kersey
, John Spieth, Lincoln Stein, Paul W. Sternberg
:
WormBase 2012: more genomes, more data, new website. Nucleic Acids Res. 40(Database-Issue): 735-741 (2012) - 2011
- [j11]Jonathan M. Guberman, Jiye Ai, Olivier Arnaiz
, Joachim Baran, Andrew Blake
, Richard A. Baldock
, Claude Chelala
, David Croft
, Anthony Cros, Rosalind J. Cutts, Alex Di Génova, Simon A. Forbes, Takatomo Fujisawa, Emanuela Gadaleta, David M. Goodstein
, Gunes Gundem, Bernard Haggarty, Syed Haider, Matthew Hall, Todd W. Harris
, Robin Haw
, Shen Hu, Simon J. Hubbard
, Jack Hsu, Vivek Iyer, Philip Jones, Toshiaki Katayama, Rhoda Kinsella, Lei Kong, Daniel Lawson
, Yong Liang, Núria López-Bigas
, Jie Luo, Michael J. Lush, Jeremy C. Mason
, François Moreews
, Nelson Ndegwa
, Darren J. Oakley
, Christian Perez-Llamas, Michael Primig
, Elena Rivkin, Steven Rosanoff
, Rebecca Shepherd, Reinhard Simon
, William C. Skarnes, Damian Smedley, Linda Sperling
, William Spooner, Peter Stevenson, Kevin R. Stone, Jon W. Teague, Jun Wang, Jianxin Wang, Brett Whitty
, David Tai Wai Wong, Marie Wong-Erasmus, Long Yao, Ken Youens-Clark, Christina K. Yung
, Junjun Zhang, Arek Kasprzyk:
BioMart Central Portal: an open database network for the biological community. Database J. Biol. Databases Curation 2011 (2011) - [j10]Toshiaki Katayama, Mark D. Wilkinson
, Rutger A. Vos
, Takeshi Kawashima, Shuichi Kawashima
, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi
, Shin Kawano
, Jan Aerts
, Kiyoko F. Aoki-Kinoshita
, Kazuharu Arakawa
, Bruno Aranda, Raoul Jean Pierre Bonnal
, José María Fernández
, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo
, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga
, Vachiranee Limviphuvadh
, E. Luke McCarthy, Yasukazu Nakamura
, Yunsun Nam, Kozo Nishida
, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda
, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam
, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi:
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011) - 2010
- [j9]Todd W. Harris
, Igor Antoshechkin, Tamberlyn Bieri, Darin Blasiar, Juancarlos Chan, Wen J. Chen, Norie De La Cruz, Paul Davis
, Margaret J. Duesbury
, Ruihua Fang, Jolene Fernandes, Michael Han
, Ranjana Kishore, Raymond Y. N. Lee, Hans-Michael Müller, Cecilia Nakamura, Philip Ozersky, Andrei Petcherski, Arun Rangarajan, Anthony Rogers, Gary Schindelman, Erich M. Schwarz
, Mary Ann Tuli
, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, Karen Yook
, Richard Durbin
, Lincoln D. Stein, John Spieth, Paul W. Sternberg
:
WormBase: a comprehensive resource for nematode research. Nucleic Acids Res. 38(Database-Issue): 463-467 (2010)
2000 – 2009
- 2008
- [j8]Avril Coghlan
, Tristan J. Fiedler
, Sheldon J. McKay
, Paul Flicek
, Todd W. Harris
, Darin Blasiar, Lincoln D. Stein:
nGASP - the nematode genome annotation assessment project. BMC Bioinform. 9 (2008) - [j7]Anthony Rogers, Igor Antoshechkin, Tamberlyn Bieri, Darin Blasiar, Carol Bastiani, Payan Canaran, Juancarlos Chan, Wen J. Chen, Paul Davis
, Jolene Fernandes, Tristan J. Fiedler
, Michael Han
, Todd W. Harris
, Ranjana Kishore, Raymond Y. N. Lee, Sheldon J. McKay
, Hans-Michael Müller, Cecilia Nakamura, Philip Ozersky, Andrei Petcherski, Gary Schindelman, Erich M. Schwarz
, William Spooner, Mary Ann Tuli
, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, Karen Yook
, Richard Durbin
, Lincoln D. Stein, John Spieth, Paul W. Sternberg
:
WormBase 2007. Nucleic Acids Res. 36(Database-Issue): 612-617 (2008) - 2007
- [j6]Lisa R. Girard, Tristan J. Fiedler, Todd W. Harris
, Felicia Carvalho, Igor Antoshechkin, Michael Han
, Paul W. Sternberg, Lincoln D. Stein, Martin Chalfie:
WormBook: the online review of Caenorhabditis elegans biology. Nucleic Acids Res. 35(Database-Issue): 472-475 (2007) - [j5]Tamberlyn Bieri, Darin Blasiar, Philip Ozersky, Igor Antoshechkin, Carol Bastiani, Payan Canaran, Juancarlos Chan, Nansheng Chen, Wen J. Chen, Paul Davis
, Tristan J. Fiedler
, Lisa R. Girard, Michael Han
, Todd W. Harris
, Ranjana Kishore, Raymond Y. N. Lee, Sheldon J. McKay
, Hans-Michael Müller, Cecilia Nakamura, Andrei Petcherski, Arun Rangarajan, Anthony Rogers, Gary Schindelman, Erich M. Schwarz
, William Spooner, Mary Ann Tuli
, Kimberly Van Auken, Daniel Wang, Xiaodong Wang, Gary Williams, Richard Durbin
, Lincoln D. Stein, Paul W. Sternberg, John Spieth:
WormBase: new content and better access. Nucleic Acids Res. 35(Database-Issue): 506-510 (2007) - 2006
- [j4]Erich M. Schwarz
, Igor Antoshechkin, Carol Bastiani, Tamberlyn Bieri, Darin Blasiar, Payan Canaran, Juancarlos Chan, Nansheng Chen, Wen J. Chen, Paul Davis
, Tristan J. Fiedler, Lisa R. Girard, Todd W. Harris, Eimear Kenny, Ranjana Kishore, Daniel Lawson
, Raymond Y. N. Lee, Hans-Michael Müller, Cecilia Nakamura, Philip Ozersky, Andrei Petcherski, Anthony Rogers, William Spooner, Mary Ann Tuli
, Kimberly Van Auken, Daniel Wang, Richard Durbin
, John Spieth, Lincoln D. Stein, Paul W. Sternberg:
WormBase: better software, richer content. Nucleic Acids Res. 34(Database-Issue): 475-478 (2006) - 2005
- [j3]Nansheng Chen, Todd W. Harris
, Igor Antoshechkin, Carol Bastiani, Tamberlyn Bieri, Darin Blasiar, Keith Bradnam
, Payan Canaran, Juancarlos Chan, Chao-Kung Chen, Wen J. Chen, Fiona Cunningham
, Paul Davis
, Eimear Kenny, Ranjana Kishore, Daniel Lawson
, Raymond Y. N. Lee, Hans-Michael Müller, Cecilia Nakamura, Shraddha Pai, Philip Ozersky, Andrei Petcherski, Anthony Rogers, Aniko Sabo, Erich M. Schwarz
, Kimberly Van Auken, Qinghua Wang, Richard Durbin
, John Spieth, Paul W. Sternberg, Lincoln D. Stein:
WormBase: a comprehensive data resource for Caenorhabditis biology and genomics. Nucleic Acids Res. 33(Database-Issue): 383-389 (2005) - 2004
- [j2]Todd W. Harris, Nansheng Chen, Fiona Cunningham
, Marcela K. Tello-Ruiz, Igor Antoshechkin, Carol Bastiani, Tamberlyn Bieri, Darin Blasiar, Keith Bradnam
, Juancarlos Chan, Chao-Kung Chen, Wen J. Chen, Paul Davis
, Eimear Kenny, Ranjana Kishore, Daniel Lawson
, Raymond Y. N. Lee, Hans-Michael Müller, Cecilia Nakamura, Philip Ozersky, Andrei Petcherski, Anthony Rogers, Aniko Sabo, Erich M. Schwarz
, Kimberly Van Auken, Qinghua Wang, Richard Durbin
, John Spieth, Paul W. Sternberg, Lincoln D. Stein:
WormBase: a multi-species resource for nematode biology and genomics. Nucleic Acids Res. 32(Database-Issue): 411-417 (2004) - 2003
- [j1]Todd W. Harris
, Raymond Y. N. Lee, Erich M. Schwarz, Keith Bradnam
, Daniel Lawson
, Wen J. Chen, Darin Blasiar, Eimear Kenny, Fiona Cunningham
, Ranjana Kishore, Juancarlos Chan, Hans-Michael Müller, Andrei Petcherski, Gudmundur A. Thorisson
, Allen Day, Tamberlyn Bieri, Anthony Rogers, Chao-Kung Chen, John Spieth, Paul W. Sternberg, Richard Durbin
, Lincoln D. Stein:
WormBase: a cross-species database for comparative genomics. Nucleic Acids Res. 31(1): 133-137 (2003)
Coauthor Index
aka: Lincoln D. Stein
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