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ORCIDSadaf R. Alam
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2020 – today
- 2023
[j11]Sadaf R. Alam
, Miguel Gila, Mark Klein, Maxime Martinasso, Thomas C. Schulthess:
Versatile software-defined HPC and cloud clusters on Alps supercomputer for diverse workflows. Int. J. High Perform. Comput. Appl. 37(3-4): 288-305 (2023)- 2022
- [j10]Sadaf R. Alam, Javier Bartolome, Michele Carpenè, Kalle Happonen, Jacques-Charles Lafoucriere, Dirk Pleiter:
Fenix: a Pan-European federation of supercomputing and cloud e-infrastructure services. Commun. ACM 65(4): 46-47 (2022) - [j9]Sadaf R. Alam, Lois Curfman McInnes, Kengo Nakajima:
IEEE Special Issue on Innovative R&D Toward the Exascale Era. IEEE Trans. Parallel Distributed Syst. 33(4): 736-738 (2022) - [e3]Felix Wolf, Sameer Shende, Candace Culhane, Sadaf R. Alam, Heike Jagode:
SC22: International Conference for High Performance Computing, Networking, Storage and Analysis, Dallas, TX, USA, November 13-18, 2022. IEEE 2022, ISBN 978-1-6654-5444-5 [contents] - 2021
- [c39]Sadaf R. Alam, Miguel Gila, Mark Klein, Maxime Martinasso:
Multi-tenancy Management and Zero Downtime Upgrades using Cray-HPE Shasta Supercomputers. SC (Workshops) 2021: 87-94 - 2020
- [c38]Sadaf R. Alam, Javier Bartolome, Sanzio Bassini, Michele Carpenè, Mirko Cestari, Frederic Combeau, Sergi Girona, Stefano Gorini, Giuseppe Fiameni, Björn Hagemeier, Thorsten Hater, Andreas Herten, Nikoleta Kiapidou, Wouter Klijn, Dorian Krause, Jacques-Charles Lafoucriere, Cerlane Leong, Thomas Leibovici, Thomas Lippert, Colin McMurtrie, Pavel Mezentsev, Anne Nahm, Boris Orth, Dirk Pleiter, Thomas C. Schulthess, Benedikt von St. Vieth, Debora Testi, Gilles Wiber:
Archival Data Repository Services to Enable HPC and Cloud Workflows in a Federated Research e-Infrastructure. SuperCompCloud@SC 2020: 39-44 - [c37]Sadaf R. Alam, Mark Klein, Mauro Bianco, Roberto Aielli, Xavier Lapillonne, Andre Walser, Thomas C. Schulthess:
Software Defined Infrastructure for Operational Numerical Weather Prediction. SMC 2020: 303-317
2010 – 2019
- 2019
- [c36]Sadaf R. Alam, Javier Bartolome, Sanzio Bassini, Michele Carpenè, Mirko Cestari, Frederic Combeau, Sergi Girona, Stefano Gorini, Giuseppe Fiameni, Björn Hagemeier, Andreas Herten, Nikoleta Kiapidou, Wouter Klijn, Dorian Krause, Jacques-Charles Lafoucriere, Cerlane Leong, Thomas Leibovici, Thomas Lippert, Colin McMurtrie, Pavel Mezentsev, Anne Nahm, Boris Orth, Dirk Pleiter, Thomas C. Schulthess, Benedikt von St. Vieth, Debora Testi, Gilles Wiber:
Fenix: Distributed e-Infrastructure Services for EBRAINS. BrainComp 2019: 81-89 - [c35]Mark Klein, Maxime Martinasso, Siew Hoon Leong, Sadaf R. Alam:
Interactive Supercomputing for Experimental Data-Driven Workflows. HUST/SE-HER/WIHPC@SC 2019: 164-178 - [e2]Michèle Weiland, Guido Juckeland, Sadaf R. Alam, Heike Jagode:
High Performance Computing - ISC High Performance 2019 International Workshops, Frankfurt, Germany, June 16-20, 2019, Revised Selected Papers. Lecture Notes in Computer Science 11887, Springer 2019, ISBN 978-3-030-34355-2 [contents] - 2018
- [c34]Maxime Martinasso, Miguel Gila, Mauro Bianco, Sadaf R. Alam, Colin McMurtrie, Thomas C. Schulthess:
RM-replay: a high-fidelity tuning, optimization and exploration tool for resource management. SC 2018: 25:1-25:13 - [e1]Rio Yokota, Michèle Weiland, John Shalf, Sadaf R. Alam:
High Performance Computing - ISC High Performance 2018 International Workshops, Frankfurt/Main, Germany, June 28, 2018, Revised Selected Papers. Lecture Notes in Computer Science 11203, Springer 2018, ISBN 978-3-030-02464-2 [contents] - 2017
- [c33]Sadaf R. Alam:
Abstractions for supercomputing platforms to facilitate consolidation of services: poster. Middleware Posters and Demos 2017: 9-10 - 2016
- [c32]Maxime Martinasso, Grzegorz Kwasniewski, Sadaf R. Alam, Thomas C. Schulthess, Torsten Hoefler:
A PCIe congestion-aware performance model for densely populated accelerator servers. SC 2016: 739-749 - 2013
- [j8]Pratul K. Agarwal, Scott S. Hampton, Jeffrey D. Poznanovic, Arvind Ramanathan, Sadaf R. Alam, Paul S. Crozier:
Performance modeling of microsecond scale biological molecular dynamics simulations on heterogeneous architectures. Concurr. Comput. Pract. Exp. 25(10): 1356-1375 (2013) - [j7]Sadaf R. Alam, Constantine Bekas, Hans Boettiger, Alessandro Curioni, Gilles Fourestey, Willi Homberg, Michael Knobloch, Teodoro Laino, Thilo Maurer, Bernd Mohr, Dirk Pleiter, Arwed Schiller, Thomas C. Schulthess, Valéry Weber:
Early experiences with scientific applications on the IBM Blue Gene/Q supercomputer. IBM J. Res. Dev. 57(1/2): 14 (2013) - [c31]Antonio J. Peña, Sadaf R. Alam:
Evaluation of Inter- and Intra-node Data Transfer Efficiencies between GPU Devices and their Impact on Scalable Applications. CCGRID 2013: 144-151 - 2012
- [j6]Adrian Tineo, Sadaf R. Alam, Thomas C. Schulthess:
Towards autotuning by alternating communication methods. SIGMETRICS Perform. Evaluation Rev. 40(2): 80-85 (2012) - [c30]Sadaf R. Alam, Gilles Fourestey, Brice Videau, Luigi Genovese, Stefan Goedecker, Nazim Dugan:
Overlapping Computations with Communications and I/O Explicitly Using OpenMP Based Heterogeneous Threading Models. IWOMP 2012: 267-270 - 2010
- [c29]Ananth Nallamuthu, Melissa C. Smith, Scott S. Hampton, Pratul K. Agarwal, Sadaf R. Alam:
Energy efficient biomolecular simulations with FPGA-based reconfigurable computing. Conf. Computing Frontiers 2010: 83-84 - [c28]Scott S. Hampton, Pratul K. Agarwal, Sadaf R. Alam, Paul S. Crozier:
Towards microsecond biological molecular dynamics simulations on hybrid processors. HPCS 2010: 98-107 - [c27]Scott S. Hampton, Sadaf R. Alam, Paul S. Crozier, Pratul K. Agarwal:
Optimal Utilization of Heterogeneous Resources for Biomolecular Simulations. SC 2010: 1-11
2000 – 2009
- 2009
- [c26]Sadaf R. Alam, Richard F. Barrett, Heike Jagode, Jeffery A. Kuehn, Stephen W. Poole, Ramanan Sankaran:
Impact of Quad-Core Cray XT4 System and Software Stack on Scientific Computation. Euro-Par 2009: 334-344 - [c25]Anand Tikotekar, Hong Ong, Sadaf R. Alam, Geoffroy Vallée, Thomas J. Naughton, Christian Engelmann, Stephen L. Scott:
Performance comparison of two virtual machine scenarios using an HPC application: a case study using molecular dynamics simulations. HPCVirt@EuroSys 2009: 33-40 - [c24]Heike Jagode, Jack J. Dongarra, Sadaf R. Alam, Jeffrey S. Vetter, Wyatt Spear, Allen D. Malony:
A Holistic Approach for Performance Measurement and Analysis for Petascale Applications. ICCS (2) 2009: 686-695 - [c23]Sadaf R. Alam, Richard F. Barrett, Jeffery A. Kuehn, Steve Poole:
Performance Characterization of a Hierarchical MPI Implementation on Large-scale Distributed-memory Platforms. ICPP 2009: 132-139 - [c22]Sadaf R. Alam, Richard F. Barrett, Jeffery A. Kuehn, Stephen W. Poole:
Performance analysis and projections for Petascale applications on Cray XT series systems. IPDPS 2009: 1-8 - [c21]Ashley M. DeFlumere, Sadaf R. Alam:
Exploring multi-core limitations through comparison of contemporary systems. Richard Tapia Celebration of Diversity in Computing Conference 2009: 75-80 - 2008
- [j5]Jack J. Dongarra, Robert B. Graybill, William J. Harrod, Robert F. Lucas, Ewing L. Lusk, Piotr Luszczek, Janice McMahon, Allan Snavely, Jeffrey S. Vetter, Katherine A. Yelick, Sadaf R. Alam, Roy L. Campbell, Laura Carrington, Tzu-Yi Chen, Omid Khalili, Jeremy S. Meredith, Mustafa M. Tikir:
DARPA's HPCS Program- History, Models, Tools, Languages. Adv. Comput. 72: 1-100 (2008) - [j4]Sadaf R. Alam, Richard F. Barrett, Mark R. Fahey, Jeffery A. Kuehn, O. E. Bronson Messer, Richard Tran Mills, Philip C. Roth, Jeffrey S. Vetter, Patrick H. Worley:
An Evaluation of the Oak Ridge National Laboratory Cray XT3. Int. J. High Perform. Comput. Appl. 22(1): 52-80 (2008) - [j3]Sadaf R. Alam, Pratul K. Agarwal, Jeffrey S. Vetter:
Performance characteristics of biomolecular simulations on high-end systems with multi-core processors. Parallel Comput. 34(11): 640-651 (2008) - [c20]Sadaf R. Alam, Pratul K. Agarwal, Scott S. Hampton, Hong Ong:
Experimental Evaluation of Molecular Dynamics Simulations on Multi-core Systems. HiPC 2008: 131-141 - [c19]Sadaf R. Alam, Pratul K. Agarwal, Scott S. Hampton, Hong Ong, Jeffrey S. Vetter:
Impact of multicores on large-scale molecular dynamics simulations. IPDPS 2008: 1-7 - [c18]Charles W. Lively, Valerie E. Taylor, Sadaf R. Alam, Jeffrey S. Vetter:
A Methodology for Developing High Fidelity Communication Models for Large-Scale Applications Targeted on Multicore Systems. SBAC-PAD 2008: 55-62 - [c17]Sadaf R. Alam, Richard F. Barrett, M. Bast, Mark R. Fahey, Jeffery A. Kuehn, Collin McCurdy, James H. Rogers, Philip C. Roth, Ramanan Sankaran, Jeffrey S. Vetter, Patrick H. Worley, Weikuan Yu:
Early evaluation of IBM BlueGene/P. SC 2008: 23 - 2007
- [j2]Sadaf R. Alam, Pratul K. Agarwal, Melissa C. Smith, Jeffrey S. Vetter, David Caliga:
Using FPGA Devices to Accelerate Biomolecular Simulations. Computer 40(3): 66-73 (2007) - [j1]Sadaf R. Alam, Pratul K. Agarwal, Jeffrey S. Vetter, Melissa C. Smith:
Throughput Improvement of Molecular Dynamics Simulations Using Reconfigurable Computing. Scalable Comput. Pract. Exp. 8(4) (2007) - [c16]Sadaf R. Alam, Jeffrey S. Vetter, Melissa C. Smith:
An Application Specific Memory Characterization Technique for Co-processor Accelerators. ASAP 2007: 353-358 - [c15]Sadaf R. Alam, Nikhil Bhatia, Jeffrey S. Vetter:
Sensitivity Analysis of Biomolecular Simulations using Symbolic Models. BIBE 2007: 294-300 - [c14]Sadaf R. Alam, Pratul K. Agarwal, Jeffery A. Kuehn:
Performance Evaluation of a Scalable Molecular Dynamics Simulation Framework on a Massively-Parallel System. BIBE 2007: 1459-1466 - [c13]Sadaf R. Alam, Jeremy S. Meredith, Jeffrey S. Vetter:
Balancing productivity and performance on the cell broadband engine. CLUSTER 2007: 149-158 - [c12]Sadaf R. Alam, Nikhil Bhatia, Jeffrey S. Vetter:
An Exploration of Performance Attributes for Symbolic Modeling of Emerging Processing Devices. HPCC 2007: 683-694 - [c11]Sadaf R. Alam, Pratul K. Agarwal:
On the Path to Enable Multi-scale Biomolecular Simulations on PetaFLOPS Supercomputer with Multi-core Processors. IPDPS 2007: 1-8 - [c10]Jeremy S. Meredith, Sadaf R. Alam, Jeffrey S. Vetter:
Analysis of a Computational Biology Simulation Technique on Emerging Processing Architectures. IPDPS 2007: 1-8 - [c9]Richard F. Barrett, Sadaf R. Alam, Jeffrey S. Vetter:
Performance evaluation of the cray XT3 configured with dual core opteron processors. PPoPP 2007: 148-149 - [c8]Sadaf R. Alam, Jeffery A. Kuehn, Richard F. Barrett, Jeffrey M. Larkin, Mark R. Fahey, Ramanan Sankaran, Patrick H. Worley:
Cray XT4: an early evaluation for petascale scientific simulation. SC 2007: 39 - 2006
- [c7]Sadaf R. Alam, Jeffrey S. Vetter:
Hierarchical Model Validation of Symbolic Performance Models of Scientific Kernels. Euro-Par 2006: 65-77 - [c6]Sadaf R. Alam, Jeffrey S. Vetter:
An Analysis of System Balance Requirements for Scientific Applications. ICPP 2006: 229-236 - [c5]Sadaf R. Alam, Richard F. Barrett, Jeffery A. Kuehn, Philip C. Roth, Jeffrey S. Vetter:
Characterization of Scientific Workloads on Systems with Multi-Core Processors. IISWC 2006: 225-236 - [c4]Sadaf R. Alam, Jeffrey S. Vetter:
A framework to develop symbolic performance models of parallel applications. IPDPS 2006 - [c3]Jeffrey S. Vetter, Sadaf R. Alam, Thomas H. Dunigan Jr., Mark R. Fahey, Philip C. Roth, Patrick H. Worley:
Early evaluation of the Cray XT3. IPDPS 2006 - [c2]Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwal, Al Geist:
Performance characterization of molecular dynamics techniques for biomolecular simulations. PPoPP 2006: 59-68 - 2005
- [c1]Sadaf R. Alam, Jeffrey S. Vetter:
Performance and Scalability Analysis of Cray X1 Vectorization and Multistreaming Optimization. International Conference on Computational Science (1) 2005: 304-312
Coauthor Index
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