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2020 – today
- 2021
[j18]Kyubum Lee
, Chih-Hsuan Wei, Zhiyong Lu:
Recent advances of automated methods for searching and extracting genomic variant information from biomedical literature. Briefings Bioinform. 22(3) (2021)- [j17]Mengyu Xie, Kyubum Lee, John H. Lockhart, Scott D. Cukras, Rodrigo Carvajal, Amer A. Beg, Elsa R. Flores, Mingxiang Teng, Christine H. Chung, Aik Choon Tan:
TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures. Bioinform. 37(20): 3681-3683 (2021) - [j16]Kyubum Lee, John H. Lockhart, Mengyu Xie, Ritu Chaudhary, Robbert J. C. Slebos, Elsa R. Flores, Christine H. Chung, Aik Choon Tan:
Deep Learning of Histopathology Images at the Single Cell Level. Frontiers Artif. Intell. 4: 754641 (2021) - [j15]Alexis Allot, Kyubum Lee, Qingyu Chen, Ling Luo, Zhiyong Lu:
LitSuggest: a web-based system for literature recommendation and curation using machine learning. Nucleic Acids Res. 49(Webserver-Issue): 352-358 (2021) - 2020
- [j14]Qingyu Chen, Kyubum Lee, Shankai Yan, Sun Kim, Chih-Hsuan Wei, Zhiyong Lu:
BioConceptVec: Creating and evaluating literature-based biomedical concept embeddings on a large scale. PLoS Comput. Biol. 16(4) (2020)
2010 – 2019
- 2019
- [c3]Chih-Hsuan Wei, Kyubum Lee, Robert Leaman, Zhiyong Lu:
Biomedical Mention Disambiguation using a Deep Learning Approach. BCB 2019: 307-313 - [i2]Chih-Hsuan Wei, Kyubum Lee, Robert Leaman, Zhiyong Lu:
Biomedical Mention Disambiguation using a Deep Learning Approach. CoRR abs/1909.10416 (2019) - [i1]Qingyu Chen, Kyubum Lee, Shankai Yan, Sun Kim, Chih-Hsuan Wei, Zhiyong Lu:
BioConceptVec: creating and evaluating literature-based biomedical concept embeddings on a large scale. CoRR abs/1912.10846 (2019) - 2018
- [j13]Kyubum Lee, Byounggun Kim, Yonghwa Choi, Sunkyu Kim, Won-Ho Shin, Sunwon Lee, Sungjoon Park, Seongsoon Kim, Aik Choon Tan, Jaewoo Kang:
Deep learning of mutation-gene-drug relations from the literature. BMC Bioinform. 19(1): 21:1-21:13 (2018) - [j12]Alexis Allot, Yifan Peng, Chih-Hsuan Wei, Kyubum Lee, Lon Phan, Zhiyong Lu:
LitVar: a semantic search engine for linking genomic variant data in PubMed and PMC. Nucleic Acids Res. 46(Webserver-Issue): W530-W536 (2018) - [j11]Kyubum Lee, Maria Livia Famiglietti, Aoife McMahon, Chih-Hsuan Wei, Jacqueline A. L. MacArthur, Sylvain Poux, Lionel Breuza, Alan J. Bridge, Fiona Cunningham, Ioannis Xenarios, Zhiyong Lu:
Scaling up data curation using deep learning: An application to literature triage in genomic variation resources. PLoS Comput. Biol. 14(8) (2018) - 2017
- [j10]Myunggyo Lee, Kyubum Lee, Namhee Yu, Insu Jang, Ikjung Choi, Pora Kim, Ye Eun Jang, Byounggun Kim, Sunkyu Kim, Byungwook Lee, Jaewoo Kang, Sanghyuk Lee:
ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining. Nucleic Acids Res. 45(Database-Issue): D784-D789 (2017) - 2016
- [j9]Kyubum Lee, Sunwon Lee, Sungjoon Park, Sunkyu Kim, Suhkyung Kim, Kwanghun Choi, Aik Choon Tan, Jaewoo Kang:
BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations. Database J. Biol. Databases Curation 2016 (2016) - [j8]Kyubum Lee, Won-Ho Shin, Byounggun Kim, Sunwon Lee, Yonghwa Choi, Sunkyu Kim, Minji Jeon, Aik Choon Tan, Jaewoo Kang:
HiPub: translating PubMed and PMC texts to networks for knowledge discovery. Bioinform. 32(18): 2886-2888 (2016) - [j7]Jocelyn Barbosa, Kyubum Lee, Sunwon Lee, Bilal Ahmed Lodhi, Jae-Gu Cho, Woo-Keun Seo, Jaewoo Kang:
Efficient quantitative assessment of facial paralysis using iris segmentation and active contour-based key points detection with hybrid classifier. BMC Medical Imaging 16: 23 (2016) - 2015
- [j6]Minjae Yoo, Jimin Shin, Jihye Kim, Karen A. Ryall, Kyubum Lee, Sunwon Lee, Minji Jeon, Jaewoo Kang, Aik Choon Tan:
DSigDB: drug signatures database for gene set analysis. Bioinform. 31(18): 3069-3071 (2015) - 2014
- [j5]Minji Jeon, Sunwon Lee, Kyubum Lee, Aik Choon Tan, Jaewoo Kang:
BEReX: Biomedical Entity-Relationship eXplorer. Bioinform. 30(1): 135-136 (2014) - 2013
- [j4]Junkyu Lee, Seongsoon Kim, Sunwon Lee, Kyubum Lee, Jaewoo Kang:
On the efficacy of per-relation basis performance evaluation for PPI extraction and a high-precision rule-based approach. BMC Medical Informatics Decis. Mak. 13(S-1): S7 (2013) - 2012
- [j3]Jaehoon Choi, Donghyeon Kim, Seongsoon Kim, Sunwon Lee, Kyubum Lee, Jaewoo Kang:
BOSS: context-enhanced search for biomedical objects. BMC Medical Informatics Decis. Mak. 12(S-1): S7 (2012) - [c2]Kyubum Lee, Sunwon Lee, Minji Jeon, Jaehoon Choi, Jaewoo Kang:
Drug-drug interaction analysis using heterogeneous biological information network. BIBM 2012: 1-5 - [c1]Junkyu Lee, Seongsoon Kim, Sunwon Lee, Kyubum Lee, Jaewoo Kang:
High precision rule based PPI extraction and per-pair basis performance evaluation. DTMBIO@CIKM 2012: 69-76 - 2011
- [j2]Jihoon Choi, Kyubum Lee, Saerom Lee, Jay (Jongtae) Ihm:
Channel selection for IEEE 802.11 based wireless LANs using 2.4GHz band. IEICE Electron. Express 8(16): 1275-1280 (2011) - 2010
- [j1]Hanjun Shin, Ki Hoon Kim, Chihwan Song, Injoon Lee, Kyubum Lee, Jaewoo Kang, Yoon Kyoo Kang:
Electrodiagnosis support system for localizing neural injury in an upper limb. J. Am. Medical Informatics Assoc. 17(3): 345-347 (2010)
Coauthor Index
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