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ORCIDAaron L. Halpern
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2010 – 2019
- 2012
[j2]Paolo Carnevali, Jonathan Baccash, Aaron L. Halpern, Igor Nazarenko, Geoffrey B. Nilsen, Krishna P. Pant, Jessica C. Ebert, Anushka Brownley, Matt Morenzoni, Vitali Karpinchyk, Bruce Martin, Dennis G. Ballinger, Radoje Drmanac:
Computational Techniques for Human Genome Resequencing Using Mated Gapped Reads. J. Comput. Biol. 19(3): 279-292 (2012)- 2011
- [c8]Yuan Li, Aaron L. Halpern, Shaojie Zhang:
TreeLign: simultaneous stepwise alignment and phylogenetic positioning, with its application to automatic phylogenetic assignment of 16S rRNAs. BCB 2011: 451-456
2000 – 2009
- 2008
- [j1]Gennady Denisov, Brian Walenz, Aaron L. Halpern, Jason R. Miller
, Nelson Axelrod, Samuel Levy, Granger G. Sutton:
Consensus generation and variant detection by Celera Assembler. Bioinform. 24(8): 1035-1040 (2008) - 2007
- [c7]Knut Reinert, Markus Bauer, Andreas Döring, Gunnar W. Klau, Aaron L. Halpern:
A General Paradigm for Fast, Adaptive Clustering of Biological Sequences. German Conference on Bioinformatics 2007: 15-29 - 2004
- [c6]Olaf Delgado-Friedrichs, Aaron L. Halpern, Ross Lippert, Christian Rausch, Stephan C. Schuster, Daniel H. Huson:
Syntenic Layout of Two Assemblies of Related Genomes. German Conference on Bioinformatics 2004: 3-12 - 2002
- [c5]Daniel P. Fasulo, Aaron L. Halpern, Ian M. Dew, Clark M. Mobarry:
Efficiently detecting polymorphisms during the fragment assembly process. ISMB 2002: 294-302 - [c4]Aaron L. Halpern, Daniel H. Huson, Knut Reinert:
Segment Match Refinement and Applications. WABI 2002: 126-139 - 2001
- [c3]Daniel H. Huson, Knut Reinert, Saul A. Kravitz, Karin A. Remington, Arthur L. Delcher, Ian M. Dew, Michael Flanigan, Aaron L. Halpern, Zhongwu Lai, Clark M. Mobarry, Granger G. Sutton, Eugene W. Myers:
Design of a compartmentalized shotgun assembler for the human genome. ISMB (Supplement of Bioinformatics) 2001: 132-139 - [c2]Russell J. Turner, Kabir Chaturvedi, Nathan Edwards, Daniel P. Fasulo, Aaron L. Halpern, Daniel H. Huson, Oliver Kohlbacher, Jason R. Miller, Knut Reinert, Karin A. Remington, Russell Schwartz, Brian Walenz, Shibu Yooseph, Sorin Istrail:
Visualization challenges for a new cyberpharmaceutical computing paradigm. IEEE Symposium on Parallel and Large-Data Visualization and Graphics 2001: 7-18 - [c1]Daniel H. Huson, Aaron L. Halpern, Zhongwu Lai, Eugene W. Myers, Knut Reinert, Granger G. Sutton:
Comparing Assemblies Using Fragments and Mate-Pairs. WABI 2001: 294-306
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