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2020 – today
- 2021
[j61]Nicola K. Dinsdale, Emma Bluemke, Stephen M. Smith, Zobair Arya, Diego Vidaurre
, Mark Jenkinson, Ana I. L. Namburete:
Learning patterns of the ageing brain in MRI using deep convolutional networks. NeuroImage 224: 117401 (2021)- 2020
- [j60]Sean P. Fitzgibbon, Samuel J. Harrison, Mark Jenkinson, Luke Baxter, Emma C. Robinson, Matteo Bastiani, Jelena Bozek, Vyacheslav Karolis, Lucilio Cordero-Grande, Anthony N. Price, Emer J. Hughes, Antonios Makropoulos, Jonathan Passerat-Palmbach, Andreas Schuh, Jianliang Gao, Seyedeh-Rezvan Farahibozorg, Jonathan O'Muircheartaigh, Judit Ciarrusta, Jesper Andersson:
The developing Human Connectome Project (dHCP) automated resting-state functional processing framework for newborn infants. NeuroImage 223: 117303 (2020) - [c31]Nicola K. Dinsdale, Mark Jenkinson, Ana I. L. Namburete:
Unlearning Scanner Bias for MRI Harmonisation. MICCAI (2) 2020: 369-378 - [c30]Nicola K. Dinsdale, Mark Jenkinson, Ana I. L. Namburete:
Unlearning Scanner Bias for MRI Harmonisation in Medical Image Segmentation. MIUA 2020: 15-25 - [c29]Madeleine K. Wyburd, Mark Jenkinson, Ana I. L. Namburete:
Cortical Plate Segmentation Using CNNs in 3D Fetal Ultrasound. MIUA 2020: 56-68
2010 – 2019
- 2019
- [j59]Vaanathi Sundaresan, Ludovica Griffanti, Petya Kindalova, Fidel Alfaro-Almagro, Giovanna Zamboni, Peter M. Rothwell, Thomas E. Nichols, Mark Jenkinson:
Modelling the distribution of white matter hyperintensities due to ageing on MRI images using Bayesian inference. NeuroImage 185: 434-445 (2019) - [j58]Luke Baxter, Sean P. Fitzgibbon, Fiona Moultrie, Sezgi Goksan, Mark Jenkinson, Stephen M. Smith, Jesper L. R. Andersson, Eugene P. Duff, Rebeccah Slater:
Optimising neonatal fMRI data analysis: Design and validation of an extended dHCP preprocessing pipeline to characterise noxious-evoked brain activity in infants. NeuroImage 186: 286-300 (2019) - [j57]Vaanathi Sundaresan, Giovanna Zamboni, Campbell Le Heron, Peter M. Rothwell, Masud Husain, Marco Battaglini, Nicola De Stefano, Mark Jenkinson, Ludovica Griffanti:
Automated lesion segmentation with BIANCA: Impact of population-level features, classification algorithm and locally adaptive thresholding. NeuroImage 202 (2019) - [j56]Antoine Saillant, Ian Armstrong, Vijay P. Shah, Sven Zuehlsdorff, Charles Hayden, Jérôme Declerck, Kimberley Saint, Matthew Memmott, Mark Jenkinson, Michael A. Chappell:
Assessing Reliability of Myocardial Blood Flow After Motion Correction With Dynamic PET Using a Bayesian Framework. IEEE Trans. Medical Imaging 38(5): 1216-1226 (2019) - [c28]Nicola K. Dinsdale, Mark Jenkinson, Ana I. L. Namburete:
Spatial Warping Network for 3D Segmentation of the Hippocampus in MR Images. MICCAI (3) 2019: 284-291 - 2018
- [j55]Fidel Alfaro-Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N. Sotiropoulos, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander, Hui Zhang, Iulius Dragonu, Paul M. Matthews, Karla L. Miller, Stephen M. Smith:
Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage 166: 400-424 (2018) - [j54]Ludovica Griffanti, Mark Jenkinson, Sana Suri, Eniko Zsoldos, Abda Mahmood, Nicola Filippini, Claire E. Sexton, Anya Topiwala, Charlotte Allan, Mika Kivimäki, Archana Singh-Manoux, Klaus P. Ebmeier, Clare E. Mackay, Giovanna Zamboni:
Classification and characterization of periventricular and deep white matter hyperintensities on MRI: A study in older adults. NeuroImage 170: 174-181 (2018) - 2017
- [j53]Falk Eippert, Yazhuo Kong, Mark Jenkinson, Irene Tracey, Jonathan C. W. Brooks:
Denoising spinal cord fMRI data: Approaches to acquisition and analysis. NeuroImage 154: 255-266 (2017) - [j52]Jeroen Mollink, Michiel Kleinnijenhuis, Anne-Marie van Cappellen van Walsum, Stamatios N. Sotiropoulos, Michiel Cottaar, Christopher Mirfin, Mattias P. Heinrich, Mark Jenkinson, Menuka Pallebage-Gamarallage, Olaf Ansorge, Saâd Jbabdi, Karla L. Miller:
Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging. NeuroImage 157: 561-574 (2017) - [j51]Krzysztof J. Gorgolewski, Fidel Alfaro-Almagro, Tibor Auer, Pierre Bellec, Mihai Capota, M. Mallar Chakravarty, Nathan William Churchill, Alexander L. Cohen, R. Cameron Craddock, Gabriel A. Devenyi, Anders Eklund, Oscar Esteban, Guillaume Flandin, Satrajit S. Ghosh, J. Swaroop Guntupalli, Mark Jenkinson, Anisha Keshavan, Gregory Kiar, Franziskus Liem, Pradeep Reddy Raamana, David Raffelt, Christopher John Steele, Pierre-Olivier Quirion, Robert E. Smith, Stephen C. Strother, Gaël Varoquaux, Yida Wang, Tal Yarkoni, Russell A. Poldrack:
BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. PLoS Comput. Biol. 13(3) (2017) - [e1]Henning Müller, B. Michael Kelm, Tal Arbel, Weidong Cai, Manual Jorge Cardoso, Georg Langs, Bjoern H. Menze, Dimitris N. Metaxas, Albert Montillo, William M. Wells III, Shaoting Zhang, Albert C. S. Chung, Mark Jenkinson, Annemie Ribbens:
Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging - MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Lecture Notes in Computer Science 10081, Springer 2017, ISBN 978-3-319-61187-7 [contents] - 2016
- [j50]Matthew F. Glasser, Timothy S. Coalson, Emma C. Robinson, Carl D. Hacker, John W. Harwell, Essa Yacoub, Kamil Ugurbil, Jesper L. R. Andersson, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith, David C. Van Essen:
A multi-modal parcellation of human cerebral cortex. Nat. 536(7615): 171-178 (2016) - [j49]Ludovica Griffanti, Michal Rolinski, Konrad Szewczyk-Krolikowski, Ricarda A. Menke, Nicola Filippini, Giovanna Zamboni, Mark Jenkinson, Michele T. M. Hu, Clare E. Mackay:
Challenges in the reproducibility of clinical studies with resting state fMRI: An example in early Parkinson's disease. NeuroImage 124: 704-713 (2016) - [j48]Eelke Visser, Max C. Keuken, Gwenaëlle Douaud, Véronique Gaura, Anne-Catherine Bachoud-Lévi, Philippe Remy, Birte U. Forstmann, Mark Jenkinson:
Automatic segmentation of the striatum and globus pallidus using MIST: Multimodal Image Segmentation Tool. NeuroImage 125: 479-497 (2016) - [j47]Adam G. Thomas, Andrea Dennis, Nancy B. Rawlings, Charlotte J. Stagg, Lucy Matthews, Martyn Morris, Shannon H. Kolind, Sean Foxley, Mark Jenkinson, Thomas E. Nichols, Helen Dawes, Peter A. Bandettini, Heidi Johansen-Berg:
Multi-modal characterization of rapid anterior hippocampal volume increase associated with aerobic exercise. NeuroImage 131: 162-170 (2016) - [j46]Eelke Visser, Max C. Keuken, Birte U. Forstmann, Mark Jenkinson:
Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7 T data at young and old age. NeuroImage 139: 324-336 (2016) - [j45]Ludovica Griffanti, Giovanna Zamboni, Aamira Khan, Linxin Li, Guendalina Bonifacio, Vaanathi Sundaresan, Ursula G. Schulz, Wilhelm Kuker, Marco Battaglini, Peter M. Rothwell, Mark Jenkinson:
BIANCA (Brain Intensity AbNormality Classification Algorithm): A new tool for automated segmentation of white matter hyperintensities. NeuroImage 141: 191-205 (2016) - [c27]Jelena Bozek, Sean P. Fitzgibbon, Robert Wright, Daniel Rueckert, Mark Jenkinson, Emma C. Robinson:
Construction of a neonatal cortical surface atlas using multimodal surface matching. ISBI 2016: 775-778 - [c26]Zobair Arya, Ludovica Griffanti, Clare E. Mackay, Mark Jenkinson:
Iterative Dual LDA: A Novel Classification Algorithm for Resting State fMRI. MLMI@MICCAI 2016: 279-286 - 2015
- [j44]Samuel J. Harrison, Mark W. Woolrich, Emma C. Robinson, Matthew F. Glasser, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith:
Large-scale Probabilistic Functional Modes from resting state fMRI. NeuroImage 109: 217-231 (2015) - [j43]Olivia K. Faull, Mark Jenkinson, Stuart Clare, Kyle T. S. Pattinson:
Functional subdivision of the human periaqueductal grey in respiratory control using 7 tesla fMRI. NeuroImage 113: 356-364 (2015) - [j42]Clare B. Poynton, Mark Jenkinson, Elfar Adalsteinsson, Edith V. Sullivan, Adolf Pfefferbaum, William M. Wells III:
Quantitative Susceptibility Mapping by Inversion of a Perturbation Field Model: Correlation With Brain Iron in Normal Aging. IEEE Trans. Medical Imaging 34(1): 339-353 (2015) - 2014
- [j41]Rob H. N. Tijssen, Mark Jenkinson, Jonathan C. W. Brooks, Peter Jezzard, Karla L. Miller:
Optimizing RetroICor and RetroKCor corrections for multi-shot 3D FMRI acquisitions. NeuroImage 84: 394-405 (2014) - [j40]Cassandra Sampaio-Baptista, Jan Scholz, Mark Jenkinson, Adam G. Thomas, Nicola Filippini, Gabrielle Smit, Gwenaëlle Douaud, Heidi Johansen-Berg:
Gray matter volume is associated with rate of subsequent skill learning after a long term training intervention. NeuroImage 96: 158-166 (2014) - [j39]Maarten Mennes, Mark Jenkinson, Romain Valabrègue, Jan K. Buitelaar, Christian F. Beckmann, Stephen M. Smith:
Optimizing full-brain coverage in human brain MRI through population distributions of brain size. NeuroImage 98: 513-520 (2014) - [j38]Rouhollah O. Abdollahi, Hauke Kolster, Matthew F. Glasser, Emma C. Robinson, Timothy S. Coalson, Donna L. Dierker, Mark Jenkinson, David C. Van Essen, Guy A. Orban:
Correspondences between retinotopic areas and myelin maps in human visual cortex. NeuroImage 99: 509-524 (2014) - [j37]Emma C. Robinson, Saâd Jbabdi, Matthew F. Glasser, Jesper L. R. Andersson, Gregory C. Burgess, Michael P. Harms, Stephen M. Smith, David C. Van Essen, Mark Jenkinson:
MSM: A new flexible framework for Multimodal Surface Matching. NeuroImage 100: 414-426 (2014) - 2013
- [j36]Matthew F. Glasser, Stamatios N. Sotiropoulos, J. Anthony Wilson, Timothy S. Coalson, Bruce Fischl, Jesper L. R. Andersson, Junqian Xu, Saâd Jbabdi, Matthew A. Webster, Jonathan R. Polimeni, David C. Van Essen, Mark Jenkinson:
The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage 80: 105-124 (2013) - [j35]Stamatios N. Sotiropoulos, Saâd Jbabdi, Junqian Xu, Jesper L. R. Andersson, Steen Moeller, Edward J. Auerbach, Matthew F. Glasser, Moisés Hernández, Guillermo Sapiro, Mark Jenkinson, David A. Feinberg, Essa Yacoub, Christophe Lenglet, David C. Van Essen, Kamil Ugurbil, Timothy Edward John Behrens:
Advances in diffusion MRI acquisition and processing in the Human Connectome Project. NeuroImage 80: 125-143 (2013) - [j34]Daniel S. Marcus, Michael P. Harms, Abraham Z. Snyder, Mark Jenkinson, J. Anthony Wilson, Matthew F. Glasser, Deanna M. Barch, Kevin A. Archie, Gregory C. Burgess, Mohana Ramaratnam, Michael R. Hodge, William Horton, Rick Herrick, Timothy R. Olsen, Michael McKay, Matthew House, Michael Hileman, Erin Reid, John W. Harwell, Timothy S. Coalson, Jon Schindler, Jennifer Stine Elam, Sandra W. Curtiss, David C. Van Essen:
Human Connectome Project informatics: Quality control, database services, and data visualization. NeuroImage 80: 202-219 (2013) - [j33]Mattias P. Heinrich, Mark Jenkinson, Michael Brady, Julia A. Schnabel:
MRF-Based Deformable Registration and Ventilation Estimation of Lung CT. IEEE Trans. Medical Imaging 32(7): 1239-1248 (2013) - [c25]Mattias P. Heinrich, Mark Jenkinson, Bartlomiej W. Papiez, Fergus V. Gleeson, Michael Brady, Julia A. Schnabel:
Edge- and Detail-Preserving Sparse Image Representations for Deformable Registration of Chest MRI and CT Volumes. IPMI 2013: 463-474 - [c24]Emma C. Robinson, Saâd Jbabdi, Jesper L. R. Andersson, Stephen M. Smith, Matthew F. Glasser, David C. Van Essen, Gregory C. Burgess, Michael P. Harms, Deanna M. Barch, Mark Jenkinson:
Multimodal Surface Matching: Fast and Generalisable Cortical Registration Using Discrete Optimisation. IPMI 2013: 475-486 - [c23]Mattias P. Heinrich, Mark Jenkinson, Bartlomiej W. Papiez, Michael Brady, Julia A. Schnabel:
Towards Realtime Multimodal Fusion for Image-Guided Interventions Using Self-similarities. MICCAI (1) 2013: 187-194 - [c22]Manav Bhushan, Julia A. Schnabel, Michael A. Chappell, Fergus Gleeson, Mark Anderson, Jamie Franklin, Michael Brady, Mark Jenkinson:
The Impact of Heterogeneity and Uncertainty on Prediction of Response to Therapy Using Dynamic MRI Data. MICCAI (1) 2013: 316-323 - 2012
- [j32]Mattias P. Heinrich, Mark Jenkinson, Manav Bhushan, Tahreema N. Matin, Fergus Gleeson, Michael Brady, Julia A. Schnabel:
MIND: Modality independent neighbourhood descriptor for multi-modal deformable registration. Medical Image Anal. 16(7): 1423-1435 (2012) - [j31]Yazhuo Kong, Mark Jenkinson, Jesper L. R. Andersson, Irene Tracey, Jonathan C. W. Brooks:
Assessment of physiological noise modelling methods for functional imaging of the spinal cord. NeuroImage 60(2): 1538-1549 (2012) - [j30]Veronica Popescu, Marco Battaglini, W. S. Hoogstrate, Sander C. J. Verfaillie, I. C. Sluimer, Ronald A. van Schijndel, Bob W. van Dijk, Keith S. Cover, Dirk L. Knol, Mark Jenkinson, Frederik Barkhof, Nicola De Stefano, Hugo Vrenken:
Optimizing parameter choice for FSL-Brain Extraction Tool (BET) on 3D T1 images in multiple sclerosis. NeuroImage 61(4): 1484-1494 (2012) - [j29]Mark Jenkinson, Christian F. Beckmann, Timothy Edward John Behrens, Mark William Woolrich, Stephen M. Smith:
FSL. NeuroImage 62(2): 782-790 (2012) - [c21]Mattias P. Heinrich, Mark Jenkinson, Michael Brady, Julia A. Schnabel:
Textural mutual information based on cluster trees for multimodal deformable registration. ISBI 2012: 1471-1474 - [c20]Mattias P. Heinrich, Mark Jenkinson, Michael Brady, Julia A. Schnabel:
Globally Optimal Deformable Registration on a Minimum Spanning Tree Using Dense Displacement Sampling. MICCAI (3) 2012: 115-122 - 2011
- [j28]Daniel S. Marcus, John W. Harwell, Timothy R. Olsen, Michael R. Hodge, Matthew F. Glasser, Fred W. Prior, Mark Jenkinson, Timothy O. Laumann, Sandra W. Curtiss, David C. Van Essen:
Informatics and Data Mining Tools and Strategies for the Human Connectome Project. Frontiers Neuroinformatics 5: 4 (2011) - [j27]Andri C. Tziortzi, Graham E. Searle, Sofia Tzimopoulou, Cristian A. Salinas, John D. Beaver, Mark Jenkinson, Marc Laruelle, Eugenii A. Rabiner, Roger N. Gunn:
Imaging dopamine receptors in humans with [11C]-(+)-PHNO: Dissection of D3 signal and anatomy. NeuroImage 54(1): 264-277 (2011) - [j26]Courtney A. Bishop, Mark Jenkinson, Jesper L. R. Andersson, Jérôme Declerck, Dorit Merhof:
Novel Fast Marching for Automated Segmentation of the Hippocampus (FMASH): Method and validation on clinical data. NeuroImage 55(3): 1009-1019 (2011) - [j25]Brian Patenaude, Stephen M. Smith, David N. Kennedy, Mark Jenkinson:
A Bayesian model of shape and appearance for subcortical brain segmentation. NeuroImage 56(3): 907-922 (2011) - [j24]Karla L. Miller, Charlotte J. Stagg, Gwenaëlle Douaud, Saâd Jbabdi, Stephen M. Smith, Timothy Edward John Behrens, Mark Jenkinson, Steven A. Chance, Margaret M. Esiri, Natalie L. Voets, Ned Jenkinson, Tipu Z. Aziz, Martin R. Turner, Heidi Johansen-Berg, Jennifer A. McNab:
Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. NeuroImage 57(1): 167-181 (2011) - [j23]Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim:
Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Medical Imaging 30(11): 1901-1920 (2011) - [c19]Manav Bhushan, Julia A. Schnabel, Laurent Risser, Mattias P. Heinrich, J. Michael Brady, Mark Jenkinson:
Motion Correction and Parameter Estimation in dceMRI Sequences: Application to Colorectal Cancer. MICCAI (1) 2011: 476-483 - [c18]Mattias P. Heinrich, Mark Jenkinson, Manav Bhushan, Tahreema N. Matin, Fergus Gleeson, J. Michael Brady, Julia A. Schnabel:
Non-local Shape Descriptor: A New Similarity Metric for Deformable Multi-modal Registration. MICCAI (2) 2011: 541-548 - [c17]Mattias P. Heinrich, Mark Jenkinson, J. Michael Brady, Julia A. Schnabel:
Non-rigid image registration through efficient discrete optimization. MIUA 2011: 187-192 - 2010
- [j22]Mojtaba Zarei, Brian Patenaude, Jessica Damoiseaux, Ciro Morgese, Steve M. Smith, Paul M. Matthews, Frederik Barkhof, Serge A. R. B. Rombouts, Ernesto Sanz-Arigita, Mark Jenkinson:
Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease. NeuroImage 49(1): 1-8 (2010) - [j21]Kolawole Oluwole Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert:
Corrigendum to "An evaluation of four automatic methods of segmenting the subcortical structures in the brain" [NeuroImage 47 (2009) 1435-1447]. NeuroImage 49(1): 1152 (2010) - [j20]Mojtaba Zarei, Brian Patenaude, Jessica Damoiseaux, Ciro Morgese, Steve M. Smith, Paul M. Matthews, Frederik Barkhof, Serge A. R. B. Rombouts, Ernesto Sanz-Arigita, Mark Jenkinson:
Corrigendum to "Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease" [NeuroImage 49 (2010) 1-8]. NeuroImage 51(2): 940 (2010) - [j19]Andri C. Tziortzi, Gwenaëlle Douaud, Paul Shotbolt, Courtney A. Bishop, Graham E. Searle, Marc Laruelle, Eugenii A. Rabiner, Mark Jenkinson, Roger N. Gunn:
A combined diffusion tensor imaging (DTI) and [11C]-(+)-PHNO positron emission tomography (PET) study to quantify dopamine D3/D2 receptors in pallidum. NeuroImage 52(Supplement-1): S23 (2010) - [c16]Courtney A. Bishop, Mark Jenkinson, Jérôme Declerck, Dorit Merhof:
Evaluation of Hippocampal Segmentation Methods for Healthy and Pathological Subjects. VCBM 2010: 17-24
2000 – 2009
- 2009
- [j18]Mark William Woolrich, Saâd Jbabdi, Brian Patenaude, Michael A. Chappell, Salima Makni, Timothy Behrens, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith:
Bayesian analysis of neuroimaging data in FSL. NeuroImage 45(1): S173-S186 (2009) - [j17]Arno Klein, Jesper L. R. Andersson, Babak A. Ardekani, John Ashburner, Brian B. Avants, Ming-Chang Chiang, Gary E. Christensen, D. Louis Collins, James C. Gee, Pierre Hellier, Joo Hyun Song, Mark Jenkinson, Claude Lepage, Daniel Rueckert, Paul M. Thompson, Tom Vercauteren, Roger P. Woods, J. John Mann, Ramin V. Parsey:
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage 46(3): 786-802 (2009) - [j16]Kolawole Oluwole Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert:
An evaluation of four automatic methods of segmenting the subcortical structures in the brain. NeuroImage 47(4): 1435-1447 (2009) - [c15]Aleksandar Petrovic, Stephen M. Smith, Ricarda A. Menke, Mark Jenkinson:
Methods for Tractography-Driven Surface Registration of Brain Structures. MICCAI (1) 2009: 705-712 - [c14]Clare B. Poynton, Mark Jenkinson, William M. Wells III:
Atlas-Based Improved Prediction of Magnetic Field Inhomogeneity for Distortion Correction of EPI Data. MICCAI (1) 2009: 951-959 - 2008
- [j15]Jonathan C. W. Brooks, Christian F. Beckmann, Karla L. Miller, Richard G. Wise, Carlo A. Porro, Irene Tracey, Mark Jenkinson:
Physiological noise modelling for spinal functional magnetic resonance imaging studies. NeuroImage 39(2): 680-692 (2008) - [c13]Clare B. Poynton, Mark Jenkinson, Stephen Whalen, Alexandra J. Golby, William M. Wells III:
Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-Based Functional Imaging. MICCAI (2) 2008: 271-279 - [c12]Kolawole O. Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert:
Comparison and Evaluation of Segmentation Techniques for Subcortical Structures in Brain MRI. MICCAI (1) 2008: 409-416 - 2007
- [j14]Peter R. Bannister, J. Michael Brady, Mark Jenkinson:
Integrating temporal information with a non-rigid method of motion correction for functional magnetic resonance images. Image Vis. Comput. 25(3): 311-320 (2007) - [j13]Stephen M. Smith, Mark Jenkinson, Christian F. Beckmann, Karla L. Miller, Mark W. Woolrich:
Meaningful design and contrast estimability in FMRI. NeuroImage 34(1): 127-136 (2007) - [j12]Stephen M. Smith, Anil Rao, Nicola De Stefano, Mark Jenkinson, Jonathan M. Schott, Paul M. Matthews, Nick C. Fox:
Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: Cross-validation of BSI, SIENA and SIENAX. NeuroImage 36(4): 1200-1206 (2007) - [c11]Lilla Zöllei, Mark Jenkinson, Samson J. Timoner, William M. Wells III:
A Marginalized MAP Approach and EM Optimization for Pair-Wise Registration. IPMI 2007: 662-674 - 2006
- [j11]T. E. J. Behrens, Mark Jenkinson, Matthew D. Robson, Stephen M. Smith, Heidi Johansen-Berg:
A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex. NeuroImage 30(1): 220-227 (2006) - [j10]Stephen M. Smith, Mark Jenkinson, Heidi Johansen-Berg, Daniel Rueckert, Thomas E. Nichols, Clare E. Mackay, Kate E. Watkins, Olga Ciccarelli, M. Zaheer Cader, Paul M. Matthews, Timothy Edward John Behrens:
Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data. NeuroImage 31(4): 1487-1505 (2006) - [c10]Kolawole O. Babalola, Timothy F. Cootes, Brian Patenaude, Anil Rao, Mark Jenkinson:
Comparing the Similarity of Statistical Shape Models Using the Bhattacharya Metric. MICCAI (1) 2006: 142-150 - [c9]Brian Patenaude, Stephen M. Smith, Mark Jenkinson:
A Bayesian Cost Function Applied to Model-Based Registration of Sub-cortical Brain Structures. WBIR 2006: 9-17 - 2005
- [c8]William R. Crum, Oscar Camara, Daniel Rueckert, Kanwal K. Bhatia, Mark Jenkinson, Derek L. G. Hill:
Generalised Overlap Measures for Assessment of Pairwise and Groupwise Image Registration and Segmentation. MICCAI 2005: 99-106 - 2004
- [j9]Mark W. Woolrich, Timothy Edward John Behrens, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith:
Multilevel linear modelling for FMRI group analysis using Bayesian inference. NeuroImage 21(4): 1732-1747 (2004) - [j8]Mark William Woolrich, Mark Jenkinson, J. Michael Brady, Stephen M. Smith:
Fully Bayesian spatio-temporal modeling of FMRI data. IEEE Trans. Medical Imaging 23(2): 213-231 (2004) - [c7]Peter R. Bannister, J. Michael Brady, Mark Jenkinson:
Non-Rigid Motion Estimation and Spatio-Temporal Realignment in FMRI. CVPR Workshops 2004: 4 - [c6]Peter R. Bannister, Michael Brady, Mark Jenkinson:
TIGER - A New Model for Spatio-temporal Realignment of FMRI Data. ECCV Workshops CVAMIA and MMBIA 2004: 292-303 - [c5]Luis Freire, Jeff Orchard, Mark Jenkinson, Jean-François Mangin:
Reducing Activation-Related Bias in FMRI Registration. MIAR 2004: 278-285 - [c4]William R. Crum, Daniel Rueckert, Mark Jenkinson, David N. Kennedy, Stephen M. Smith:
A Framework for Detailed Objective Comparison of Non-rigid Registration Algorithms in Neuroimaging. MICCAI (1) 2004: 679-686 - 2003
- [j7]James L. Wilson, Mark Jenkinson, Peter Jezzard:
Protocol to determine the optimal intraoral passive shim for minimisation of susceptibility artifact in human inferior frontal cortex. NeuroImage 19(4): 1802-1811 (2003) - [j6]Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith:
General multilevel linear modeling for group analysis in FMRI. NeuroImage 20(2): 1052-1063 (2003) - [c3]Luis Freire, Mark Jenkinson:
A Gradient-Informed Robust Motion Correction Method for FMRI. WBIR 2003: 377-386 - 2002
- [j5]Mark Jenkinson, Michael Brady:
A saliency-based hierarchy for local symmetries. Image Vis. Comput. 20(2): 85-101 (2002) - [j4]Stephen M. Smith, Yongyue Zhang, Mark Jenkinson, Jacqueline Chen, Paul M. Matthews, Antonio Federico, Nicola De Stefano:
Accurate, Robust, and Automated Longitudinal and Cross-Sectional Brain Change Analysis. NeuroImage 17(1): 479-489 (2002) - [j3]Mark Jenkinson, Peter R. Bannister, Michael Brady, Stephen M. Smith:
Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images. NeuroImage 17(2): 825-841 (2002) - [j2]James L. Wilson, Mark Jenkinson, Ivan E. Tavares de Araújo, Morten L. Kringelbach, Edmund T. Rolls, Peter Jezzard:
Fast, Fully Automated Global and Local Magnetic Field Optimization for fMRI of the Human Brain. NeuroImage 17(2): 967-976 (2002) - 2001
- [j1]Mark Jenkinson, Stephen M. Smith:
A global optimisation method for robust affine registration of brain images. Medical Image Anal. 5(2): 143-156 (2001)
1990 – 1999
- 1999
- [c2]Stephen M. Smith, Mark Jenkinson:
Accurate Robust Symmetry Estimation. MICCAI 1999: 308-317 - 1998
- [c1]Mark Jenkinson, Michael Brady:
Feature Saliency from Noise Variations in Invariants. ACCV (2) 1998: 41-48
Coauthor Index