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Jiayin Wang 0002
Person information
- affiliation: Xi'an Jiaotong University, School of Computer Science and Technology, Xi'an, China
- affiliation (2013 - 2015): Washington University in St. Louis, Genome Institute, St Louis, MO, USA
- affiliation (PhD 2013): University of Connecticut, Storrs, CT, USA
Other persons with the same name
- Jiayin Wang — disambiguation page
- Jiayin Wang 0001
— Tsinghua University, Department of Computer Science and Technology, Beijing, China
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2020 – today
- 2026
[j46]Xianglu Zhou
, Tianxiang Cui, Xiaoyan Zhu, Jiayin Wang
, Xin Lai:
UF-CDDFM: A unified framework for code defect detection using multi-modal inputs and few-shot learning. Inf. Softw. Technol. 190: 107942 (2026)
[j45]Xiaoyan Zhu
, Tianxiang Xu
, Xin Lai
, Xin Lian
, Hangyu Cheng
, Jiayin Wang
:
Reaching Software Quality for Bioinformatics Applications: How Far Are We? IEEE Trans. Software Eng. 52(2): 595-617 (2026)- 2025
[j44]Yixuan Wang
, Yanfang Guan, Xin Lai, Yuqian Liu, Zhili Chang, Xiaonan Wang, Quan Wang, Jingjing Liu, Jian Zhao
, Shuanying Yang, Jiayin Wang, Xiaofeng Song:
THOR: a TMB heterogeneity-adaptive optimization model predicts immunotherapy response using clonal genomic features in group-structured data. Briefings Bioinform. 26(1) (2025)
[j43]Xuwen Wang, Zhili Chang, Yuqian Liu, Shenjie Wang, Xiaoyan Zhu, Yang Shao, Jiayin Wang
:
EMcnv: enhancing CNV detection performance through ensemble strategies with heterogeneous meta-graph neural networks. Briefings Bioinform. 26(2) (2025)
[j42]Shenjie Wang, Xiaonan Wang, Xiaoyan Zhu, Xuwen Wang, Yuqian Liu, Minchao Zhao, Zhili Chang, Yang Shao
, Haitao Zhang, Shuanying Yang, Jiayin Wang
:
TMBquant: an explainable AI-powered caller advancing tumor mutation burden quantification across heterogeneous samples. Briefings Bioinform. 26(5) (2025)
[j41]Yidan Wang, Jiayin Wang
:
BioWorkflow: Retrieving comprehensive bioinformatics workflows from publications. Briefings Bioinform. 26(6) (2025)
[j40]Yixuan Wang
, Tianyi Zhu, Xiaofeng Song
, Peng Chen, Xiaoyan Zhu, Zhili Chang, Xiaonan Wang, Xin Lai, Jiayin Wang
:
TMBclaw: tumor clone-aware graph learning improves immunotherapy response prediction across heterogeneous cohorts. Briefings Bioinform. 26(6) (2025)
[j39]Tianci Wang, Xin Lai, Shenjie Wang, Yuqian Liu, Xiaoyan Zhu, Jiayin Wang
:
MRDagent: iterative and adaptive parameter optimization for stable ctDNA-based MRD detection in heterogeneous samples. Bioinform. 41(9) (2025)
[j38]Zhengfa Xue, Jingyu Zeng
, Xuwen Wang, Jiajing Yuan, Tianci Wang, Xin Lai, Lin Wang, Yu Wang, Huanhuan Zhu, Xin Jin
, Jiayin Wang:
ZIPcnv: accurate and efficient inference of copy number variations from shallow whole-genome sequencing. Bioinform. 41(11) (2025)
[j37]Yidan Wang, Jiayin Wang
, Zhiwei Chu:
Multi-agent large language models as evolutionary optimizers for scheduling optimization. Comput. Ind. Eng. 206: 111197 (2025)
[j36]Yu Zhang
, Xiaoyan Zhu
, Guopeng He
, Jiaxuan Li
, Jiayin Wang
:
Learning multi-behavior user intent for session-based recommendation. Expert Syst. Appl. 259: 125269 (2025)
[j35]Xuwen Wang, Yanfang Guan, Wei Gao, Xin Lai, Wuqiang Cao, Xiaoyan Zhu, Xiaoling Zeng, Yuqian Liu, Shenjie Wang, Ruoyu Liu, Xin Yi, Shuanying Yang, Jiayin Wang
:
MRDtarget: A heuristic Gaussian approach for optimizing targeted capture regions to enhance Minimal Residual Disease detection. PLoS Comput. Biol. 21(9): 1013443 (2025)
[c18]Jiaxuan Li, Xiaoyan Zhu, Hongrui Wang, Yu Zhang, Xin Lai, Jiayin Wang:
Multi-Label Ranking Loss Minimization for Matrix Completion. AAAI 2025: 18333-18340
[c17]Qiang Zhang
, Fengshun Xiao
, Tianjiao Li
, Li Lin
, Hanyin Fang
, Huyang Sun
, Ruoyu Liu
, Xiaoyan Zhu
, Jiayin Wang
:
Efficient Integration of ASR with Large Language Models to Enhance Video Search at Scale. WWW (Companion Volume) 2025: 601-610
[i2]Mingkuan Zhao, Wentao Hu, Jiayin Wang, Xin Lai, Tianchen Huang, Yuheng Min, Rui Yan, Xiaoyan Zhu:
Making Every Head Count: Sparse Attention Without the Speed-Performance Trade-off. CoRR abs/2511.09596 (2025)
[i1]Wentao Hu, Mingkuan Zhao, Shuangyong Song, Xiaoyan Zhu, Xin Lai, Jiayin Wang:
Mosaic Pruning: A Hierarchical Framework for Generalizable Pruning of Mixture-of-Experts Models. CoRR abs/2511.19822 (2025)- 2024
[j34]Shenjie Wang, Xiaoyan Zhu, Xuwen Wang, Yuqian Liu, Minchao Zhao, Zhili Chang, Xiaonan Wang, Yang Shao, Jiayin Wang
:
TMBstable: a variant caller controls performance variation across heterogeneous sequencing samples. Briefings Bioinform. 25(3) (2024)
[j33]Zhengfa Xue, Aifen Zhou, Xiaoyan Zhu, Linxuan Li, Huanhuan Zhu, Xin Jin, Jiayin Wang
:
NIPT-PG: empowering non-invasive prenatal testing to learn from population genomics through an incremental pan-genomic approach. Briefings Bioinform. 25(4) (2024)
[j32]Xin Lai, Xin Lian, Jiayin Wang
, Liu Liu, Xuanping Zhang, Xiaoyan Zhu, Yuqian Liu, Xin Chen, Paul B. S. Lai:
Classifier chain-based monitoring method for multivariate surgical outcomes. Comput. Ind. Eng. 194: 110378 (2024)
[j31]Xiaoyan Zhu, Yu Zhang
, Jiaxuan Li, Jiayin Wang, Xin Lai:
TCSR: Self-attention with time and category for session-based recommendation. Comput. Intell. 40(5) (2024)
[j30]Jiaxuan Li
, Xiaoyan Zhu
, Hongrui Wang, Yu Zhang, Jiayin Wang
:
Stacked co-training for semi-supervised multi-label learning. Inf. Sci. 677: 120906 (2024)
[j29]Xiaoyan Zhu
, Yu Zhang
, Jiayin Wang, Guangtao Wang:
Graph-enhanced and collaborative attention networks for session-based recommendation. Knowl. Based Syst. 289: 111509 (2024)
[j28]Xiaoyan Zhu
, Tong Zhu, Jiaxuan Li, Jiayin Wang:
Dual-channel graph contrastive learning for multi-label classification with label-specific features and label correlations. Neural Comput. Appl. 36(23): 14483-14502 (2024)
[j27]Yuqian Liu, Yan Chen, Huanwen Wu, Xuanping Zhang, Yuqi Wang, Xin Yi, Zhiyong Liang, Jiayin Wang
:
scMSI: Accurately inferring the sub-clonal Micro-Satellite status by an integrated deconvolution model on length spectrum. PLoS Comput. Biol. 20(12): 1012608 (2024)
[j26]Jiaxuan Li, Xiaoyan Zhu
, Weichu Zhang, Jiayin Wang
:
A ranking-based problem transformation method for weakly supervised multi-label learning. Pattern Recognit. 153: 110505 (2024)
[j25]Xin Lai
, Xiao Li
, Liu Liu, Jiayin Wang, Xuanping Zhang, Xiaoyan Zhu, Paul B. S. Lai:
A risk-adjusted exponentially weighted moving average control chart for detection of the scale parameter in surgical quality monitoring. Qual. Reliab. Eng. Int. 40(2): 1042-1060 (2024)
[j24]Xiaoyan Zhu, Tian Qiu
, Jiayin Wang, Xin Lai:
A novel instance-based method for cross-project just-in-time defect prediction. Softw. Pract. Exp. 54(6): 1087-1117 (2024)
[c16]Ruoyu Liu, Jiayin Wang, Xiaoyan Zhu, Yuqian Liu, Yixuan Wang, Shuanying Yang, Xin Lai:
LMR-EWMA: A LASSO-based Multivariate Residual Control Chart for Monitoring Rare Health-Related Events. BIBM 2024: 2224-2231
[c15]Yuqian Liu, Almonzer Salah Nooraldaim
, Zhengfa Xue, Jiayin Wang:
Enhancing Dental Implant Risk Prediction with an Interpretable Multi-Instance Learning Model. BIBM 2024: 4981-4986
[c14]Xin Lai, Xiaohai Yang, Jiayin Wang, Xiaoyan Zhu, Yuqian Liu, Ruoyu Liu, Xuwen Wang, Shenjie Wang:
An Enhanced Multiple Correction Method with Limited Independent Effective SNPs. BIBM 2024: 5379-5386
[c13]Yuqian Liu, Zhaoxing Wei
, Jiayin Wang, Xiaoyan Zhu, Ruoyu Liu, Xuwen Wang, Shenjie Wang, Xin Lai:
RMComBat: A Batch Effect Correction Algorithm for Repeated Measurement Sequencing Data to Prevent Overcorrection. BIBM 2024: 5387-5394
[c12]Xuwen Wang, Zhili Chang, Shenjie Wang, Ruoyu Liu, Yuqian Liu, Xiaoyan Zhu, Yang Shao, Xin Lai, Shuanying Yang, Jiayin Wang:
Correction of Read Biases Induced by Complex Reference Genome Regions for Improving Copy Number Variation Detection Using a Gaussian Mixture Model. BIBM 2024: 5401-5408
[c11]Yuqian Liu, Jiajing Yuan, Xiaoyan Zhu, Xin Lai, Ruoyu Liu, Xuwen Wang, Jiayin Wang:
Enabling Adaptive CNV Detection through A Novel Predictive Control Framework. BIBM 2024: 5876-5883
[c10]Xin Lai, Rundong Fan, Ruoyu Liu, Jiayin Wang, Xiaoyan Zhu, Yuqian Liu, Xuwen Wang, Shenjie Wang:
Multi-Objective Policy Monitoring Method for Epidemic Control. BIBM 2024: 5920-5927
[c9]Qiang Zhang
, Zhipeng Teng
, Disheng Wu
, Jiayin Wang
:
An Enhanced Batch Query Architecture in Real-time Recommendation. CIKM 2024: 5078-5085
[c8]Jiaxuan Li
, Tong Zhu
, Xiaoyan Zhu
, Jiayin Wang
:
Label-Specific Multi-label Classification with Entropy Guided Clustering. ICPR (2) 2024: 414-429
[c7]Minchao Zhao, Jiayin Wang, Zhili Chang, Yuqian Liu:
Enhancing MET Copy Number Estimation by Factoring in Tumor Purity and Variant Types. IWBBIO (2) 2024: 278-287- 2023
[j23]Xiaoyan Zhu
, Jingtao Ren, Jiayin Wang, Jiaxuan Li:
Automated machine learning with dynamic ensemble selection. Appl. Intell. 53(20): 23596-23612 (2023)
[j22]Guiying Wu
, Mengmeng Song
, Ke Wang, Tianyu Cui, Zicong Jiao
, Liyan Ji, Xuan Gao, Jiayin Wang
, Tao Liu, Xuefeng Xia, Huan Fang, Yanfang Guan, Xin Yi:
DELFMUT: duplex sequencing-oriented depth estimation model for stable detection of low-frequency mutations. Briefings Bioinform. 24(5) (2023)
[j21]Xin-Na Geng, Xinyu Sun, Jiayin Wang
, Lei Pan:
Scheduling on proportionate flow shop with job rejection and common due date assignment. Comput. Ind. Eng. 181: 109317 (2023)
[j20]Ruoyu Liu, Xin Lai
, Jiayin Wang
, Xiaoyan Zhu, Yuqian Liu:
SCR-CUSUM: An illness-death semi-Markov model-based risk-adjusted CUSUM for semi-competing risk data monitoring. Comput. Ind. Eng. 184: 109530 (2023)
[j19]Xiaoyan Zhu, Jiaxuan Li, Jingtao Ren, Jiayin Wang, Guangtao Wang:
Dynamic ensemble learning for multi-label classification. Inf. Sci. 623: 94-111 (2023)
[j18]Xin Lai, Xin Lian, Liu Liu, Jiayin Wang, Yuqian Liu, Ka Chun Chong
:
Generalized likelihood ratio based risk-adjusted control chart for zero-inflated Poisson process. Qual. Reliab. Eng. Int. 39(1): 363-381 (2023)
[c6]Jiaxuan Li, Xiaoyan Zhu, Jiayin Wang:
AdaBoost.C2: Boosting Classifiers Chains for Multi-Label Classification. AAAI 2023: 8580-8587
[c5]Ruoyu Liu, Xin Lai, Jiayin Wang, Paul B. S. Lai, Ka Chun Chong
:
A Control Chart Method for Simultaneously Monitoring the Average Level and Stability of Surgical Quality. BIBM 2023: 2091-2096- 2022
[j17]Xuwen Wang, Ying Xu, Ruoyu Liu, Xin Lai, Yuqian Liu
, Shenjie Wang, Xuanping Zhang, Jiayin Wang
:
PEcnv: accurate and efficient detection of copy number variations of various lengths. Briefings Bioinform. 23(5) (2022)
[j16]Xin Lai
, Ruoyu Liu, Liu Liu
, Jiayin Wang, Xuanping Zhang, Xiaoyan Zhu, Ka Chun Chong
:
Residuals based EWMA control charts with risk adjustments for zero-inflated Poisson models. Qual. Reliab. Eng. Int. 38(1): 283-303 (2022)- 2021
[j15]Xin Lai, Xiao Li
, Liu Liu, Fugee Tsung
, Paul B. S. Lai, Jiayin Wang, Xuanping Zhang, Xiaoyan Zhu, Jiaqi Liu:
A risk-adjusted approach to monitoring surgery for survival outcomes based on a weighted score test. Comput. Ind. Eng. 160: 107568 (2021)
[j14]Xiaoyan Zhu
, Chenzhen Ying
, Jiayin Wang, Jiaxuan Li, Xin Lai, Guangtao Wang:
Ensemble of ML-KNN for classification algorithm recommendation. Knowl. Based Syst. 221: 106933 (2021)
[j13]Ruoyu Liu, Xin Lai
, Jiayin Wang
, Xuanping Zhang, Xiaoyan Zhu, Paul B. S. Lai, Ci-ren Guo:
A non-linear ensemble model-based surgical risk calculator for mixed data from multiple surgical fields. BMC Medical Informatics Decis. Mak. 21-S(2): 88 (2021)
[j12]Yueying Tan, Xin Lai
, Jiayin Wang
, Xuanping Zhang, Xiaoyan Zhu, Ka Chun Chong
, Paul K. S. Chan, Jing Tang:
Risk-adjusted zero-inflated Poisson CUSUM charts for monitoring influenza surveillance data. BMC Medical Informatics Decis. Mak. 21-S(2): 96 (2021)
[j11]Xiaoyan Zhu, Yingbin Li, Jiayin Wang, Tian Zheng, Jingwen Fu:
Automatic Recommendation of a Distance Measure for Clustering Algorithms. ACM Trans. Knowl. Discov. Data 15(1): 7:1-7:22 (2021)
[c4]Xiaoyan Zhu, Ting Wang, Jiayin Wang, Ying Xu, Yuqian Liu:
A new multiple instance algorithm using structural information. ICDM 2021: 1553-1558- 2020
[j10]Yong Zhang
, Yongsheng Chen, Huixin Xu
, Junbin Fang, Zijian Zhao, Weipeng Hu, Xiaoqin Yang, Jia Ye, Yun Cheng, Jiayin Wang
, Weiqiang Sun, Jian Wang, Huanming Yang
, Jing Yan, Lin Fang
:
SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles. BMC Bioinform. 21(1): 295 (2020)
[j9]Yixuan Wang, Xuanping Zhang, Xiao Xiao, Fei-Ran Zhang, Xinxing Yan, Xuan Feng, Zhongmeng Zhao, Yanfang Guan, Jiayin Wang
:
Accurately estimating the length distributions of genomic micro-satellites by tumor purity deconvolution. BMC Bioinform. 21-S(2): 82 (2020)
[j8]Jiaqi Liu
, Jiayin Wang
, Xiao Xiao, Xin Lai, Daocheng Dai, Xuanping Zhang, Xiaoyan Zhu, Zhongmeng Zhao, Juan Wang, Zhimin Li:
A hybrid correcting method considering heterozygous variations by a comprehensive probabilistic model. BMC Genom. 21(S-10) (2020)
[j7]Yao Tong, Jiayin Wang
, Tian Zheng, Xuanping Zhang, Xiao Xiao, Xiaoyan Zhu, Xin Lai, Xiang Liu:
SETE: Sequence-based Ensemble learning approach for TCR Epitope binding prediction. Comput. Biol. Chem. 87: 107281 (2020)
[j6]Xiaolong Zhang, Meng Zhang
, Xuanping Zhang, Xiaoyan Zhu, Jiayin Wang
:
A prognostic index based on a fourteen long non-coding RNA signature to predict the recurrence-free survival for muscle-invasive bladder cancer patients. BMC Medical Informatics Decis. Mak. 20-S(3): 136 (2020)
[j5]Yidan Wang, Xuanping Zhang, Tao Wang, Jinchun Xing, Zhun Wu, Wei Li, Jiayin Wang
:
A machine learning framework for accurately recognizing circular RNAs for clinical decision-supporting. BMC Medical Informatics Decis. Mak. 20-S(3): 137 (2020)
2010 – 2019
- 2019
[c3]Xuwen Wang, Xiaoyan Zhu, Xiao Xiao, Shenjie Wang, Xuanping Zhang, Xin Lai, Jiayin Wang:
FilterLAP: Filtering False-positive Mutation Calls via a Label Propagation Framework. BIBM 2019: 1388-1395
[c2]Shenjie Wang, Jiayin Wang, Xiao Xiao, Xuanping Zhang, Xuwen Wang, Xiaoyan Zhu, Xin Lai:
GSDcreator: An Efficient and Comprehensive Simulator for Genarating NGS Data with Population Genetic Information. BIBM 2019: 1868-1875
[c1]Ruoyu Liu, Xin Lai, Xiao Xiao, Xuanping Zhang, Xiaoyan Zhu, Jiayin Wang:
An Artificial Fish Swarm Algorithm for Identifying Associations between Multiple Variants and Multiple Phenotypes. BIBM 2019: 2682-2689- 2014
[j4]Xuanping Zhang, Zhongmeng Zhao, Jiayin Wang
:
Chaotic image encryption based on circular substitution box and key stream buffer. Signal Process. Image Commun. 29(8): 902-913 (2014)- 2013
[j3]Peng Zhao, Xinyu Yang, Jiayin Wang
, Benyuan Liu, Jie Wang:
Admission control on multipath routing in 802.11-based wireless mesh networks. Ad Hoc Networks 11(8): 2235-2251 (2013)
[j2]Jiayin Wang
, Zhongmeng Zhao, Zhi Cao, Aiyuan Yang, Jin Zhang
:
A probabilistic method for identifying rare variants underlying complex traits. BMC Genom. 14(S-1): S11 (2013)- 2012
[j1]Jin Zhang
, Jiayin Wang
, Yufeng Wu:
An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data. BMC Bioinform. 13(S-6): S6 (2012)
Coauthor Index

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last updated on 2026-03-04 23:58 CET by the dblp team
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