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ORCIDMarianne Rooman
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2020 – today
- 2024
[j23]Fabrizio Pucci
, Mehari B. Zerihun, Marianne Rooman, Alexander Schug:
pycofitness - Evaluating the fitness landscape of RNA and protein sequences. Bioinform. 40(2) (2024)- 2023
- [j22]Gabriel Cia, Fabrizio Pucci, Marianne Rooman:
Critical review of conformational B-cell epitope prediction methods. Briefings Bioinform. 24(1) (2023) - [j21]Marianne Rooman, Fabrizio Pucci:
Estimating the Vertical Ionization Potential of Single-Stranded DNA Molecules. J. Chem. Inf. Model. 63(6): 1766-1775 (2023) - 2022
- [j20]Gabriel Cia, Jean Marc Kwasigroch, Marianne Rooman, Fabrizio Pucci:
SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants. Bioinform. 38(18): 4418-4419 (2022) - 2021
- [j19]François Ancien, Fabrizio Pucci, Wim F. Vranken, Marianne Rooman:
MutaFrame - an interpretative visualization framework for deleteriousness prediction of missense variants in the human exome. Bioinform. 38(1): 265-266 (2021) - [j18]Sankar Basu, Simon S. Assaf, Fabian Teheux, Marianne Rooman, Fabrizio Pucci:
BRANEart: Identify Stability Strength and Weakness Regions in Membrane Proteins. Frontiers Bioinform. 1 (2021) - [i1]Fabrizio Pucci, Martin Schwersensky, Marianne Rooman:
AI challenges for predicting the impact of mutations on protein stability. CoRR abs/2111.04208 (2021) - 2020
- [j17]Qingzhen Hou, Jean Marc Kwasigroch, Marianne Rooman, Fabrizio Pucci:
SOLart: a structure-based method to predict protein solubility and aggregation. Bioinform. 36(5): 1445-1452 (2020)
2010 – 2019
- 2018
- [j16]Fabrizio Pucci, Katrien V. Bernaerts, Jean Marc Kwasigroch, Marianne Rooman:
Quantification of biases in predictions of protein stability changes upon mutations. Bioinform. 34(21): 3659-3665 (2018) - [j15]Ibrahim Tanyalcin, Carla Al Assaf, Julien Ferté, François Ancien, Taushif Khan, Guillaume Smits, Marianne Rooman, Wim F. Vranken:
Lexicon Visualization Library and JavaScript for Scientific Data Visualization. Comput. Sci. Eng. 20(1): 50-65 (2018) - 2017
- [j14]Fabrizio Pucci, Jean Marc Kwasigroch, Marianne Rooman:
SCooP: an accurate and fast predictor of protein stability curves as a function of temperature. Bioinform. 33(21): 3415-3422 (2017) - [j13]Georgios A. Dalkas, Marianne Rooman:
SEPIa, a knowledge-driven algorithm for predicting conformational B-cell epitopes from the amino acid sequence. BMC Bioinform. 18(1): 95:1-95:12 (2017) - [j12]Daniele Raimondi, Ibrahim Tanyalcin, Julien Ferté, Andrea M. Gazzo, Gabriele Orlando, Tom Lenaerts, Marianne Rooman, Wim F. Vranken:
DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins. Nucleic Acids Res. 45(Webserver-Issue): W201-W206 (2017) - 2016
- [j11]Daniele Raimondi, Andrea M. Gazzo, Marianne Rooman, Tom Lenaerts, Wim F. Vranken:
Multilevel biological characterization of exomic variants at the protein level significantly improves the identification of their deleterious effects. Bioinform. 32(12): 1797-1804 (2016) - 2014
- [j10]Fabrizio Pucci, Marianne Rooman:
Stability Curve Prediction of Homologous Proteins Using Temperature-Dependent Statistical Potentials. PLoS Comput. Biol. 10(7) (2014) - 2013
- [j9]Yves Dehouck, Jean Marc Kwasigroch, Marianne Rooman, Dimitri Gilis:
BeAtMuSiC: prediction of changes in protein-protein binding affinity on mutations. Nucleic Acids Res. 41(Webserver-Issue): 333-339 (2013) - 2012
- [c3]Marie De Laet, Yves Dehouck, Dimitri Gilis, Marianne Rooman:
Identification of protein stability patches that pinpoint key structural or functional sites. BCB 2012: 521-523 - 2011
- [j8]Yves Dehouck, Jean Marc Kwasigroch, Dimitri Gilis, Marianne Rooman:
PoPMuSiC 2.1 : a web server for the estimation of protein stability changes upon mutation and sequence optimality. BMC Bioinform. 12: 151 (2011) - [c2]Jaroslav Albert, Marianne Rooman:
Modeling Delays in State Transition of a Bistable Genetic Switch under the Influence of Extrinsic Noise. BIOINFORMATICS 2011: 278-282 - 2010
- [j7]Tomasz Konopka, Marianne Rooman:
Gene expression model (in)validation by Fourier analysis. BMC Syst. Biol. 4: 123 (2010) - [c1]Alexandre Haye, Jaroslav Albert, Marianne Rooman:
Robustness Analysis of a Linear Dynamical Model of the Drosophila Gene Expression. CIBB 2010: 242-252
2000 – 2009
- 2009
- [j6]Yves Dehouck, Aline Grosfils, Benjamin Folch, Dimitri Gilis, Philippe Bogaerts, Marianne Rooman:
Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0. Bioinform. 25(19): 2537-2543 (2009) - 2008
- [j5]Jean Marc Kwasigroch, René Wintjens, Dimitri Gilis, Marianne Rooman:
SODa: An Mn/Fe superoxide dismutase prediction and design server. BMC Bioinform. 9 (2008) - [j4]Benjamin Folch, Marianne Rooman, Yves Dehouck:
Thermostability of Salt Bridges versus Hydrophobic Interactions in Proteins Probed by Statistical Potentials. J. Chem. Inf. Model. 48(1): 119-127 (2008) - 2006
- [j3]Jean Marc Kwasigroch, Marianne Rooman:
Prelude&Fugue, predicting local protein structure, early folding regions and structural weaknesses. Bioinform. 22(14): 1800-1802 (2006) - [j2]Dimitri Gilis, Christophe Biot, Eric Buisine, Yves Dehouck, Marianne Rooman:
Development of Novel Statistical Potentials Describing Cation-pi Interactions in Proteins and Comparison with Semiempirical and Quantum Chemistry Approaches. J. Chem. Inf. Model. 46(2): 884-893 (2006) - 2002
- [j1]Jean Marc Kwasigroch, Dimitri Gilis, Yves Dehouck, Marianne Rooman:
PoPMuSiC, rationally designing point mutations in protein structures. Bioinform. 18(12): 1701-1702 (2002)
Coauthor Index
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