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2020 – today
- 2024
- [j102]Zeyuan Ding, Zhihao Yang, Hongfei Lin:
A plug-and-play adapter for consistency identification in task-oriented dialogue systems. Inf. Process. Manag. 61(2): 103637 (2024) - [j101]Yan Zhang, Zhihao Yang
, Yumeng Yang
, Hongfei Lin
, Jian Wang:
Location-enhanced syntactic knowledge for biomedical relation extraction. J. Biomed. Informatics 156: 104676 (2024) - [j100]Zeyuan Ding
, Zhihao Yang
, Yinbo Qiao, Hongfei Lin:
KMc-ToD: Structure knowledge enhanced multi-copy network for task-oriented dialogue system. Knowl. Based Syst. 293: 111662 (2024) - [j99]Shengqian Xu, Zhihao Yang, Daoyuan Wang, Yang Tang, Jian Lin, Zenghui Gu, Gangmin Ning
:
A dynamic spatiotemporal model for fall warning and protection. Medical Biol. Eng. Comput. 62(4): 1061-1076 (2024) - [j98]Qinyu Han
, Zhihao Yang
, Hongfei Lin
, Tian Qin
:
Let Topic Flow: A Unified Topic-Guided Segment-Wise Dialogue Summarization Framework. IEEE ACM Trans. Audio Speech Lang. Process. 32: 2021-2032 (2024) - [j97]Xinming Wang
, Hanlin Zhang, Zhiyong Wang
, Wei Nie, Zhihao Yang, Weihong Ren
, Qiong Xu, Xiu Xu, Honghai Liu
:
Dual Regression-Enhanced Gaze Target Detection in the Wild. IEEE Trans. Cybern. 54(1): 219-229 (2024) - [j96]Yingwen Zhao
, Zhihao Yang
, Lei Wang, Yin Zhang
, Hongfei Lin
, Jian Wang
:
Predicting Protein Functions Based on Heterogeneous Graph Attention Technique. IEEE J. Biomed. Health Informatics 28(4): 2408-2415 (2024) - [c107]Zeyuan Ding, Zhihao Yang, Ling Luo, Yuanyuan Sun, Hongfei Lin:
From Retrieval to Generation: A Simple and Unified Generative Model for End-to-End Task-Oriented Dialogue. AAAI 2024: 17907-17914 - [c106]Jingjie Zeng, Liang Yang, Jiahao Kang, Yufeng Diao, Zhihao Yang, Hongfei Lin:
"Barking up the Right Tree", a GAN-Based Pun Generation Model through Semantic Pruning. LREC/COLING 2024: 2119-2131 - [c105]Yuxuan Jiang
, Chaoyun Zhang
, Shilin He
, Zhihao Yang
, Minghua Ma
, Si Qin
, Yu Kang
, Yingnong Dang
, Saravan Rajmohan
, Qingwei Lin
, Dongmei Zhang
:
Xpert: Empowering Incident Management with Query Recommendations via Large Language Models. ICSE 2024: 92:1-92:13 - 2023
- [j95]Shixian Zhao
, Jincan Lei
, Qiheng Tian, Zhihao Yang
, Jing Huang:
Development of Hybrid-Actuator Robotic Exoskeleton Based on Gesture Signal Recognition Algorithm for the Rehabilitation of Dysfunctional Finger. IEEE Access 11: 81071-81078 (2023) - [j94]Peng Chen
, Jian Wang, Hongfei Lin, Di Zhao, Zhihao Yang
:
Few-shot biomedical named entity recognition via knowledge-guided instance generation and prompt contrastive learning. Bioinform. 39(8) (2023) - [j93]Chaoyu Zhu, Xiaoqiong Xia, Nan Li, Fan Zhong
, Zhihao Yang
, Lei Liu:
RDKG-115: Assisting drug repurposing and discovery for rare diseases by trimodal knowledge graph embedding. Comput. Biol. Medicine 164: 107262 (2023) - [j92]Jianjun Yan, Weixiang Xiong
, Li Jin, Jinlin Jiang, Zhihao Yang, Jiangtao Shi, Shuai Hu:
Gait Recognition Based on Minirocket with Inertial Measurement Units. Int. J. Humanoid Robotics 20(5): 2350009:1-2350009:28 (2023) - [j91]Yumeng Yang, Hongfei Lin
, Zhihao Yang, Yijia Zhang, Di Zhao
, Shuaiheng Huai:
ADPG: Biomedical entity recognition based on Automatic Dependency Parsing Graph. J. Biomed. Informatics 140: 104317 (2023) - [j90]Nan Li
, Zhihao Yang
, Yumeng Yang, Jian Wang, Hongfei Lin:
Hyperbolic hierarchical knowledge graph embeddings for biological entities. J. Biomed. Informatics 147: 104503 (2023) - [j89]Bolin Wang, Yuanyuan Sun, Yonghe Chu, Changrong Min, Zhihao Yang, Hongfei Lin:
Local discriminative graph convolutional networks for text classification. Multim. Syst. 29(4): 2363-2373 (2023) - [j88]Yi Sun
, Jian Wang
, Hongfei Lin
, Yijia Zhang
, Zhihao Yang
:
Knowledge Guided Attention and Graph Convolutional Networks for Chemical-Disease Relation Extraction. IEEE ACM Trans. Comput. Biol. Bioinform. 20(1): 489-499 (2023) - [j87]Peng Chen
, Jian Wang
, Hongfei Lin
, Yijia Zhang
, Zhihao Yang
:
Knowledge Adaptive Multi-Way Matching Network for Biomedical Named Entity Recognition via Machine Reading Comprehension. IEEE ACM Trans. Comput. Biol. Bioinform. 20(3): 2101-2111 (2023) - [j86]Yingwen Zhao
, Zhihao Yang
, Yongkai Hong
, Lei Wang
, Yin Zhang
, Hongfei Lin
, Jian Wang
:
Improving Protein Function Prediction by Adaptively Fusing Information From Protein Sequences and Biomedical Literature. IEEE J. Biomed. Health Informatics 27(2): 1140-1148 (2023) - [j85]Nan Li
, Zhihao Yang
, Jian Wang
, Hongfei Lin
:
A Self-Supervised Framework for Learning Biological Entities Representation by Fusing Class Information. IEEE J. Biomed. Health Informatics 27(8): 4178-4188 (2023) - [c104]Jinzhong Ning, Zhihao Yang, Yuanyuan Sun, Zhizheng Wang, Hongfei Lin:
OD-RTE: A One-Stage Object Detection Framework for Relational Triple Extraction. ACL (1) 2023: 11120-11135 - [c103]Zhehuan Zhao, Bo Xu, Yuying Zou, Zhihao Yang, Menghan Wang, Hongfei Lin:
Biomedical Named Entity Recognition Through Deep Reinforcement Learning. BIBM 2023: 779-784 - [c102]Haixin Tan, Zhihao Yang, Zeyuan Ding, Zhijun Wang, Ling Luo, Lei Wang, Yin Zhang, Wei Liu, Hongfei Lin, Jian Wang:
Joint Biomedical Entity and Relation Extraction with Unified Interaction Maps. BIBM 2023: 1437-1442 - [c101]Yuqi Liu, Zhihao Yang, Jinzhong Ning, Zhijun Wang, Ling Luo, Lei Wang, Yin Zhang, Wei Liu, Hongfei Lin, Jian Wang:
Joint Biomedical Entity and Relation Extraction Based on Triple Region Vertices. BIBM 2023: 2117-2120 - [c100]Zhihao Yang, Wenyi Lian, Siyuan Lai:
BokehOrNot: Transforming Bokeh Effect with Image Transformer and Lens Metadata Embedding. CVPR Workshops 2023: 1542-1550 - [c99]Marcos V. Conde, Manuel Kolmet, Tim Seizinger, Tom E. Bishop, Radu Timofte
, Xiangyu Kong, Dafeng Zhang, Jinlong Wu, Fan Wang, Juewen Peng, Zhiyu Pan, Chengxin Liu, Xianrui Luo, Huiqiang Sun, Liao Shen, Zhiguo Cao, Ke Xian, Chaowei Liu, Zigeng Chen, Xingyi Yang, Songhua Liu, Yongcheng Jing, Michael Bi Mi, Xinchao Wang, Zhihao Yang, Wenyi Lian, Siyuan Lai, Haichuan Zhang, Trung Hoang, Amirsaeed Yazdani, Vishal Monga, Ziwei Luo, Fredrik K. Gustafsson, Zheng Zhao, Jens Sjölund, Thomas B. Schön, Yuxuan Zhao, Baoliang Chen, Yiqing Xu, JiXiangNiu:
Lens-to-Lens Bokeh Effect Transformation. NTIRE 2023 Challenge Report. CVPR Workshops 2023: 1643-1659 - [c98]Zhihao Yang, Yunqi Zhang, Songda Li, Qinhui Chen, Hui Zhao, Wei Cai, Xi Lin:
TrajTrace: Tracing Moving Objects over Social Media. DASFAA (4) 2023: 679-684 - [c97]Xiran Li, Fanggang Wang, Zhihao Yang, Qianhua Li:
Uplink Precoding Design for Coherent Paired Users in Multi-cell MIMO Systems. GLOBECOM (Workshops) 2023: 673-678 - [c96]Zhihao Yang, Xinming Wang, Zhiyong Wang, Qiong Xu, Xiu Xu, Honghai Liu:
Improving Stability of Gaze Target Detection in Videos. IECON 2023: 1-5 - [c95]Jinzhong Ning, Zhihao Yang, Zhizheng Wang, Yuanyuan Sun, Hongfei Lin:
ODEE: A One-Stage Object Detection Framework for Overlapping and Nested Event Extraction. IJCAI 2023: 5170-5178 - [c94]Zhihao Yang
, Gefei Jia
, Shibo Wang
, Yutao Wang
, Guoyan Bai
, Siyu Tian
, Shangli Tang
:
Research on Segmentation Algorithm for Vertebral CT Images Based on Spatial Configuration-Net and U-Net Deep Learning Model. ISAIMS 2023: 236-241 - [c93]Dongxu Li
, Zhihao Yang
, Yuquan Lan
, Yunqi Zhang
, Hui Zhao
, Gang Zhao
:
Simple Approach for Aspect Sentiment Triplet Extraction Using Span-Based Segment Tagging and Dual Extractors. SIGIR 2023: 2374-2378 - [i5]Zhihao Yang, Wenyi Lian, Siyuan Lai:
BokehOrNot: Transforming Bokeh Effect with Image Transformer and Lens Metadata Embedding. CoRR abs/2306.04032 (2023) - [i4]Ling Luo, Jinzhong Ning, Yingwen Zhao, Zhijun Wang, Zeyuan Ding, Peng Chen, Weiru Fu, Qinyu Han, Guangtao Xu, Yunzhi Qiu, Dinghao Pan, Jiru Li, Hao Li, Wenduo Feng, Senbo Tu, Yuqi Liu, Zhihao Yang, Jian Wang, Yuanyuan Sun, Hongfei Lin:
Taiyi: A Bilingual Fine-Tuned Large Language Model for Diverse Biomedical Tasks. CoRR abs/2311.11608 (2023) - [i3]Yuxuan Jiang, Chaoyun Zhang, Shilin He, Zhihao Yang, Minghua Ma, Si Qin, Yu Kang, Yingnong Dang, Saravan Rajmohan, Qingwei Lin, Dongmei Zhang:
Xpert: Empowering Incident Management with Query Recommendations via Large Language Models. CoRR abs/2312.11988 (2023) - 2022
- [j84]Chaoyu Zhu
, Zhihao Yang, Xiaoqiong Xia, Nan Li, Fan Zhong, Lei Liu
:
Multimodal reasoning based on knowledge graph embedding for specific diseases. Bioinform. 38(8): 2235-2245 (2022) - [j83]Bolin Wang, Yuanyuan Sun, Yonghe Chu, Di Zhao, Zhihao Yang, Jian Wang:
Refining electronic medical records representation in manifold subspace. BMC Bioinform. 23(1): 115 (2022) - [j82]Bolin Wang, Yuanyuan Sun, Yonghe Chu, Hongfei Lin, Di Zhao, Liang Yang, Chen Shen, Zhihao Yang, Jian Wang:
Manifold biomedical text sentence embedding. Neurocomputing 492: 117-125 (2022) - [j81]Yan Wang, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang:
Dependency multi-weight-view graphs for event detection with label co-occurrence. Inf. Sci. 606: 423-439 (2022) - [j80]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
MRC4BioER: Joint extraction of biomedical entities and relations in the machine reading comprehension framework. J. Biomed. Informatics 125: 103956 (2022) - [j79]Hui Ma
, Jian Wang, Hongfei Lin
, Xuejun Pan, Yijia Zhang, Zhihao Yang:
A multi-view network for real-time emotion recognition in conversations. Knowl. Based Syst. 236: 107751 (2022) - [j78]Bolin Wang, Yuanyuan Sun, Yonghe Chu, Zhihao Yang, Hongfei Lin:
Global-locality preserving projection for word embedding. Int. J. Mach. Learn. Cybern. 13(10): 2943-2956 (2022) - [j77]Weilin Wang
, Keyan Li
, Zhihao Yang
, Jun Chen
, Linliang Miao
, Jun Ouyang, Xiaofei Yang:
An Adaptive Alternating Magnetic Interference Suppression (AAIS) Algorithm for Geomagnetic Vector Measurement. Sensors 22(10): 3642 (2022) - [j76]Shuai Liu
, Xinran Xu, Zhihao Yang, Xiaohan Zhao, Shichao Liu
, Wen Zhang
:
EPIHC: Improving Enhancer-Promoter Interaction Prediction by Using Hybrid Features and Communicative Learning. IEEE ACM Trans. Comput. Biol. Bioinform. 19(6): 3435-3443 (2022) - [j75]Zhizheng Wang
, Yuanyuan Sun
, Xuyang Hu, Jiafeng Zhao, Zhihao Yang
, Hongfei Lin
:
A Semantic Network Encoder for Associated Fact Prediction. IEEE Trans. Knowl. Data Eng. 34(11): 5114-5125 (2022) - [c92]Yingwen Zhao, Zhihao Yang, Yongkai Hong, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Adaptive Multi-view Graph Convolutional Network for Gene Ontology Annotations of Proteins. BIBM 2022: 90-93 - [c91]Yan Zhang, Jiru Li, Zhihao Yang, Hongfei Lin, Jian Wang:
Location-Guided Token Pair Tagger for Joint Biomedical Entity and Relation Extraction. BIBM 2022: 666-671 - [c90]Jinzhong Ning, Jiru Li, Zhihao Yang, Yuanyuan Sun, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
BioNER-CFEM: Biomedical Named Entity Recognition Based on Character Feature Enhancement with Multimodal Method. BIBM 2022: 787-790 - [c89]Ruobing Li, Jian Wang, Hongfei Lin, Yuan Lin, Huiyi Lu, Zhihao Yang:
Patient Condition Change Network for Safe Medication Recommendation. BIBM 2022: 1046-1051 - [c88]Jinzhong Ning, Zhihao Yang, Zhizheng Wang, Yuanyuan Sun, Hongfei Lin, Jian Wang:
Two Languages Are Better than One: Bilingual Enhancement for Chinese Named Entity Recognition. COLING 2022: 2024-2033 - [c87]Xinming Wang, Zhihao Yang, Hanlin Zhang, Zuode Liu, Weihong Ren, Xiu Xu, Qiong Xu, Honghai Liu:
A Coarse-to-Fine Human Visual Focus Estimation for ASD Toddlers in Early Screening. ICIRA (1) 2022: 445-454 - [c86]Xinyan Li, Dongxu Li, Zhihao Yang, Hui Zhao, Wei Cai, Xi Lin:
ND-NER: A Named Entity Recognition Dataset for OSINT Towards the National Defense Domain. ICONIP (5) 2022: 361-372 - [c85]Zhihao Yang, Yan Chen, Yunping Chen, Youchun Lu:
Unsupervised Classification of Polarimetric SAR Images Based on Scattering Mechanism. IGARSS 2022: 2702-2705 - [c84]Zhihao Yang, Ming Ni, Haoming Liu, Anupam Trivedi, Dipti Srinivasan:
Distribution Network Congestion Management with Internet Data Centers Using Bi-level Programming. ISGT Asia 2022: 394-398 - [c83]Shuwen Yang, Zhihao Yang, Dong Li, Yingxue Zhang, Zhanguang Zhang, Guojie Song, Jianye Hao:
Versatile Multi-stage Graph Neural Network for Circuit Representation. NeurIPS 2022 - [c82]Dinghao Pan, Zhihao Yang, Haixin Tan, Jiangming Wu, Hongfei Lin:
Dialogue Topic Extraction as Sentence Sequence Labeling. NLPCC (2) 2022: 252-262 - [c81]Chenyu Xiong, Haoming Liu, Zhihao Yang, Jian Wang
:
Optimal Reactive Power Dispatch of Distribution Network Considering Voltage Security. SSCI 2022: 1362-1367 - [d2]Zhihao Yang:
Two-stage robust optimization strategy for spatially-temporally correlated data centers with data-driven uncertainty sets. IEEE DataPort, 2022 - [d1]Zhihao Yang
:
The DLMP-based Equilibrium Optimization Strategy for Data Center Park with Spatial-Temporal Demand-side Resources. IEEE DataPort, 2022 - 2021
- [j74]Xiaoru Xu
, Zhihao Yang, Yunting Xian:
ATM: Attribute-Based Privacy-Preserving Task Assignment and Incentive Mechanism for Crowdsensing. IEEE Access 9: 60923-60933 (2021) - [j73]Di Zhao
, Jian Wang, Hongfei Lin, Xin Wang, Zhihao Yang, Yijia Zhang:
Biomedical cross-sentence relation extraction via multihead attention and graph convolutional networks. Appl. Soft Comput. 104: 107230 (2021) - [j72]Tongxuan Zhang, Hongfei Lin, Yuqi Ren, Zhihao Yang, Jian Wang, Shaowu Zhang, Bo Xu, Xiaodong Duan:
Adversarial transfer network with bilinear attention for the detection of adverse drug reactions from social media. Appl. Soft Comput. 106: 107358 (2021) - [j71]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Deep learning with language models improves named entity recognition for PharmaCoNER. BMC Bioinform. 22(1): 602 (2021) - [j70]Di Zhao
, Jian Wang, Yonghe Chu, Yijia Zhang, Zhihao Yang, Hongfei Lin:
Improving biomedical word representation with locally linear embedding. Neurocomputing 447: 172-182 (2021) - [j69]Tongxuan Zhang, Hongfei Lin, Yuqi Ren, Zhihao Yang, Jian Wang, Xiaodong Duan, Bo Xu:
Identifying adverse drug reaction entities from social media with adversarial transfer learning model. Neurocomputing 453: 254-262 (2021) - [j68]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Biomedical named entity recognition using BERT in the machine reading comprehension framework. J. Biomed. Informatics 118: 103799 (2021) - [j67]Di Zhao
, Jian Wang, Hongfei Lin, Yonghe Chu, Yan Wang, Yi-Jia Zhang, Zhihao Yang:
Sentence representation with manifold learning for biomedical texts. Knowl. Based Syst. 218: 106869 (2021) - [j66]Zhiheng Li
, Zhihao Yang
, Lei Wang, Yin Zhang, Hongfei Lin
, Jian Wang
:
Lexicon Knowledge Boosted Interaction Graph Network for Adverse Drug Reaction Recognition From Social Media. IEEE J. Biomed. Health Informatics 25(7): 2777-2786 (2021) - [c80]Peng Chen, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang, Di Zhao
, Hui Ma
:
Co-Attentive Span Network with Multi-task learning for Biomedical Named Entity Recognition. BIBM 2021: 649-652 - [c79]Qiming Liu, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jinzhong Ning:
SGAT: a Self-supervised Graph Attention Network for Biomedical Relation Extraction. BIBM 2021: 698-701 - [c78]Zhehuan Zhao, Yuying Zou, Yang Tian, Bo Xu, Zhihao Yang, Jian Wang, Hongfei Lin, Shimin Shan, Yu Liu:
TL-BERT: A Novel Biomedical Relation Extraction Approach. BIBM 2021: 797-800 - [c77]Haifeng Liu, Hongfei Lin, Chen Shen, Zhihao Yang, Jian Wang, Liang Yang:
Self-Supervised Learning with Heterogeneous Graph Neural Network for COVID-19 Drug Recommendation. BIBM 2021: 1412-1417 - [c76]Haiyang Lu, Zhihao Yang, Long Ba:
High electric conducting 1D nanomaterial/polymer composite fibers for wearable biomedical sensing system. BIC 2021: 6-11 - [c75]Mengyuan Qian, Jian Wang, Hongfei Lin, Di Zhao, Yijia Zhang, Wentai Tang, Zhihao Yang:
Auto-learning Convolution-Based Graph Convolutional Network for Medical Relation Extraction. CCIR 2021: 195-207 - [c74]Haixin Tan, Zhihao Yang, Jinzhong Ning, Zeyuan Ding, Qiming Liu:
Chinese Medical Named Entity Recognition Based on Chinese Character Radical Features and Pre-trained Language Models. IALP 2021: 121-124 - [c73]Zeyuan Ding, Zhihao Yang, Hongfei Lin, Jian Wang:
Focus on Interaction: A Novel Dynamic Graph Model for Joint Multiple Intent Detection and Slot Filling. IJCAI 2021: 3801-3807 - [c72]Wenying Zhou, Zhihao Yang, Zhidu Li, Dapeng Wu:
Stochastic Delay Performance Guarantee in A Terminal-Edge Collaboration System. WCSP 2021: 1-5 - 2020
- [j65]Zhengguang Li
, Hongfei Lin
, Wei Zheng
, Michael M. Tadesse
, Zhihao Yang
, Jian Wang
:
Interactive Self-Attentive Siamese Network for Biomedical Sentence Similarity. IEEE Access 8: 84093-84104 (2020) - [j64]Biyun Chen
, Zhihao Yang
, Yiyi Zhang
, Yanni Chen
, Junhui Zhao
:
Risk Assessment of Cyber Attacks on Power Grids Considering the Characteristics of Attack Behaviors. IEEE Access 8: 148331-148344 (2020) - [j63]Zhihao Yang
, Ming Ni, Haoming Liu
:
Pricing Strategy of Multi-Energy Provider Considering Integrated Demand Response. IEEE Access 8: 149041-149051 (2020) - [j62]Cong Sun, Zhihao Yang
, Leilei Su, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Chemical-protein interaction extraction via Gaussian probability distribution and external biomedical knowledge. Bioinform. 36(15): 4323-4330 (2020) - [j61]Zhiheng Li, Zhihao Yang, Yang Xiang, Ling Luo
, Yuanyuan Sun, Hongfei Lin:
Exploiting sequence labeling framework to extract document-level relations from biomedical texts. BMC Bioinform. 21(1): 125 (2020) - [j60]Di Zhao
, Jian Wang, Yi-Jia Zhang, Xin Wang, Hongfei Lin, Zhihao Yang:
Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction. BMC Bioinform. 21(1): 312 (2020) - [j59]Jian Wang, Mengying Li, Qishuai Diao, Hongfei Lin, Zhihao Yang, Yi-Jia Zhang:
Biomedical document triage using a hierarchical attention-based capsule network. BMC Bioinform. 21-S(13): 380 (2020) - [j58]Chen Shen, Hongfei Lin, Zhengguang Li, Yonghe Chu, Zhihao Yang:
Sensitivity-controlled event trigger identification in multi-level biomedical context. Int. J. Data Min. Bioinform. 24(3): 238-257 (2020) - [j57]Yufeng Diao
, Hongfei Lin, Liang Yang, Xiaochao Fan, Di Wu, Zhihao Yang, Jian Wang, Kan Xu:
FBSN: A hybrid fine-grained neural network for biomedical event trigger identification. Neurocomputing 381: 105-112 (2020) - [j56]Ling Luo
, Zhihao Yang, Mingyu Cao, Lei Wang, Yin Zhang, Hongfei Lin:
A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature. J. Biomed. Informatics 103: 103384 (2020) - [j55]Cong Sun
, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Attention guided capsule networks for chemical-protein interaction extraction. J. Biomed. Informatics 103: 103392 (2020) - [j54]Zhiheng Li, Zhihao Yang, Ling Luo
, Yang Xiang, Hongfei Lin:
Exploiting adversarial transfer learning for adverse drug reaction detection from texts. J. Biomed. Informatics 106: 103431 (2020) - [j53]Nan Li, Zhihao Yang, Ling Luo
, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
KGHC: a knowledge graph for hepatocellular carcinoma. BMC Medical Informatics Decis. Mak. 20-S(3): 135 (2020) - [c71]Haifeng Liu, Hongfei Lin, Chen Shen, Liang Yang, Yuan Lin, Bo Xu, Zhihao Yang, Jian Wang, Yuanyuan Sun:
Drug Repositioning for SARS-CoV-2 Based on Graph Neural Network. BIBM 2020: 319-322 - [c70]Yuan Xu
, Zhihao Yang, Yawen Song, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Star-BiLSTM-LAN for Document-level Mutation-Disease Relation Extraction from Biomedical Literature. BIBM 2020: 357-362 - [c69]Tongxuan Zhang, Hongfei Lin, Bo Xu, Yuqi Ren, Zhihao Yang, Jian Wang, Xiaodong Duan:
Gated iterative capsule network for adverse drug reaction detection from social media. BIBM 2020: 387-390 - [c68]Erniu Wang, Fan Wang, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Extracting biomedical relations via a multi-head attention based graph convolutional network. BIBM 2020: 793-798 - [c67]Zhengguang Li, Hongfei Lin, Chen Shen, Wei Zheng, Zhihao Yang, Jian Wang:
Cross2Self-attentive Bidirectional Recurrent Neural Network with BERT for Biomedical Semantic Text Similarity. BIBM 2020: 1051-1054 - [c66]Chen Shen, Hongfei Lin, Zhiheng Li, Yonghe Chu, Zhengguang Li, Zhihao Yang:
A Graph-boosted Framework for Adverse Drug Event Detection on Twitter. BIBM 2020: 1129-1131 - [c65]Yanguang Chen, Yuanyuan Sun, Zhihao Yang, Hongfei Lin:
Joint Entity and Relation Extraction for Legal Documents with Legal Feature Enhancement. COLING 2020: 1561-1571 - [c64]Xiaojun Zhu, Yan Li, Yibin Tao, Qun Zhang, Jinhua Xue, Chen Zhou, Zhihao Yang:
Power Decoupling Control Strategy of 35 kV Cascaded H-Bridge Energy Storage System. ICNSC 2020: 1-6 - [i2]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Biomedical named entity recognition using BERT in the machine reading comprehension framework. CoRR abs/2009.01560 (2020)
2010 – 2019
- 2019
- [j52]Shengtian Sang
, Zhihao Yang, Xiaoxia Liu, Lei Wang, Hongfei Lin, Jian Wang, Michel Dumontier:
GrEDeL: A Knowledge Graph Embedding Based Method for Drug Discovery From Biomedical Literatures. IEEE Access 7: 8404-8415 (2019) - [j51]Cong Sun
, Zhihao Yang, Ling Luo
, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
A Deep Learning Approach With Deep Contextualized Word Representations for Chemical-Protein Interaction Extraction From Biomedical Literature. IEEE Access 7: 151034-151046 (2019) - [j50]Xiaoxia Liu, Zhihao Yang, Shengtian Sang
, Hongfei Lin, Jian Wang, Bo Xu:
Detection of protein complexes from multiple protein interaction networks using graph embedding. Artif. Intell. Medicine 96: 107-115 (2019) - [j49]Chen Shen, Hongfei Lin, Xiaochao Fan, Yonghe Chu
, Zhihao Yang, Jian Wang, Shaowu Zhang:
Biomedical event trigger detection with convolutional highway neural network and extreme learning machine. Appl. Soft Comput. 84 (2019) - [j48]Yijia Zhang
, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun:
Chemical-protein interaction extraction via contextualized word representations and multihead attention. Database J. Biol. Databases Curation 2019: baz054 (2019) - [j47]Tongxuan Zhang, Hongfei Lin
, Yuqi Ren, Liang Yang, Bo Xu
, Zhihao Yang, Jian Wang, Yijia Zhang:
Adverse drug reaction detection via a multihop self-attention mechanism. BMC Bioinform. 20(1): 479:1-479:11 (2019) - [j46]Bo Xu, Hongfei Lin, Liang Yang, Kan Xu, Yi-Jia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin:
A supervised term ranking model for diversity enhanced biomedical information retrieval. BMC Bioinform. 20-S(16): 590:1-590:11 (2019) - [j45]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang:
Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method. Int. J. Data Min. Bioinform. 22(2): 113-130 (2019) - [j44]Ling Luo
, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
KeSACNN: a protein-protein interaction article classification approach based on deep neural network. Int. J. Data Min. Bioinform. 22(2): 131-148 (2019) - [j43]Yijia Zhang
, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun, Bo Xu, Zhehuan Zhao
:
Neural network-based approaches for biomedical relation classification: A review. J. Biomed. Informatics 99 (2019) - [j42]Di Zhao
, Jian Wang, Hongfei Lin, Zhihao Yang, Yijia Zhang
:
Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network. J. Biomed. Informatics 99 (2019) - [j41]Chen Shen, Hongfei Lin, Huihui Hao, Zhihao Yang, Jian Wang, Shaowu Zhang:
Intelligent multi-document summarization for biomedical literature by word embeddings and graph-based ranking. J. Intell. Fuzzy Syst. 37(4): 4797-4802 (2019) - [j40]Zhiheng Li, Zhihao Yang, Chen Shen, Jun Xu, Yaoyun Zhang, Hua Xu:
Integrating shortest dependency path and sentence sequence into a deep learning framework for relation extraction in clinical text. BMC Medical Informatics Decis. Mak. 19-S(1): 22:1-22:8 (2019) - [j39]Chen Shen, Hongfei Lin, Kai Guo, Kan Xu, Zhihao Yang, Jian Wang:
Detecting adverse drug reactions from social media based on multi-channel convolutional neural networks. Neural Comput. Appl. 31(9): 4799-4808 (2019) - [c63]Feng Ding, Xiangjie Kong
, Zhehuan Zhao, Feng Xia, Anfu Liu, Chenxu Bai, Bo Xu, Xiaoxia Liu, Shengtian Sang
, Hongfei Lin, Zhihao Yang, Jian Wang:
Disease Gene Prediction Based on Heterogeneous Probabilistic Hypergraph Ranking. BIBM 2019: 2021-2028 - [c62]Cong Sun, Zhihao Yang:
Transfer Learning in Biomedical Named Entity Recognition: An Evaluation of BERT in the PharmaCoNER task. BioNLP-OST@EMNLP-IJNCLP 2019: 100-104 - [c61]Yingdong Li, Jian Wang, Hongfei Lin, Shaowu Zhang, Zhihao Yang:
Residual Connected Enhanced Sequential Inference Model for Natural Language Inference. ISKE 2019: 381-386 - [c60]Tongxuan Zhang, Yuqi Ren, Michael Mesfin Tadessem, Bo Xu, Xikai Liu, Liang Yang, Zhihao Yang, Jian Wang, Hongfei Lin:
Bi-directional Capsule Network Model for Chinese Biomedical Community Question Answering. NLPCC (1) 2019: 105-116 - [c59]Jingkun Feng, Zhihao Yang, Zhiqiang Liu, Ling Luo, Hongfei Lin, Jian Wang:
DUTIR at TREC 2019: Precision Medicine Track. TREC 2019 - [i1]Cong Sun, Zhihao Yang, Leilei Su, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Chemical-protein Interaction Extraction via Gaussian Probability Distribution and External Biomedical Knowledge. CoRR abs/1911.09487 (2019) - 2018
- [j38]Ling Luo
, Zhihao Yang, Hongfei Lin, Jian Wang:
Document triage for identifying protein-protein interactions affected by mutations: a neural network ensemble approach. Database J. Biol. Databases Curation 2018: bay097 (2018) - [j37]Yijia Zhang, Wei Zheng, Hongfei Lin, Jian Wang, Zhihao Yang, Michel Dumontier
:
Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths. Bioinform. 34(5): 828-835 (2018) - [j36]Ling Luo
, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang:
An attention-based BiLSTM-CRF approach to document-level chemical named entity recognition. Bioinform. 34(8): 1381-1388 (2018) - [j35]Shengtian Sang
, Zhihao Yang, Lei Wang, Xiaoxia Liu, Hongfei Lin, Jian Wang:
SemaTyP: a knowledge graph based literature mining method for drug discovery. BMC Bioinform. 19(1): 193:1-193:11 (2018) - [j34]Xiaoxia Liu, Zhihao Yang, Shengtian Sang
, Ziwei Zhou, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Bo Xu:
Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks. BMC Bioinform. 19(1): 332:1-332:14 (2018) - [j33]Yijia Zhang
, Hongfei Lin, Zhihao Yang, Jian Wang, Shaowu Zhang, Yuanyuan Sun, Liang Yang:
A hybrid model based on neural networks for biomedical relation extraction. J. Biomed. Informatics 81: 83-92 (2018) - [j32]Wei Zheng, Hongfei Lin, Zhiheng Li, Xiaoxia Liu, Zhengguang Li, Bo Xu, Yijia Zhang
, Zhihao Yang, Jian Wang:
An effective neural model extracting document level chemical-induced disease relations from biomedical literature. J. Biomed. Informatics 83: 1-9 (2018) - [j31]Ling Luo
, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Jian Wang, Hongfei Lin:
A neural network approach to chemical and gene/protein entity recognition in patents. J. Cheminformatics 10(1): 65:1-65:10 (2018) - [j30]Jian Wang, Hongfei Lin, Hualei Dong, Daping Xiong, Zhihao Yang:
Exploring Answer Information for Question Classification in Community Question Answering. J. Multiple Valued Log. Soft Comput. 31(1-2): 67-84 (2018) - [j29]Bo Xu
, Hongfei Lin
, Yuan Lin, Yunlong Ma, Liang Yang, Jian Wang, Zhihao Yang:
Improve Biomedical Information Retrieval Using Modified Learning to Rank Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 15(6): 1797-1809 (2018) - [c58]Qingqing Li, Zhihao Yang, Zhehuan Zhao, Ling Luo
, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Yijia Zhang:
HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms. BIBM 2018: 1-3 - [c57]Xiaoxia Liu, Zhihao Yang, Shengtian Sang
, Lei Wang, Yin Zhang, Hongfei Lin, Bo Xu, Yijia Zhang, Liang Yang, Kan Xu, Jian Wang:
PC-SENE: A node embedding based method for protein complex detection. BIBM 2018: 191-192 - [c56]Bo Xu, Kun Li, Xiaoxia Liu, Delong Liu, Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia
:
Protein Complexes Detection Based on Global Network Representation Learning. BIBM 2018: 210-213 - [c55]Ling Luo
, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang:
Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach. BIBM 2018: 467-469 - [c54]Bo Xu
, Hongfei Lin, Liang Yang, Kan Xu, Yijia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin:
Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion. BIBM 2018: 556-559 - [c53]Bo Xu, Xiufeng Shi, Zhehuan Zhao, Wei Zheng, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia
:
Full-attention Based Drug Drug Interaction Extraction Exploiting User-generated Content. BIBM 2018: 560-565 - [c52]Qingqing Li, Zhihao Yang, Ling Luo
, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang:
A multi-task learning based approach to biomedical entity relation extraction. BIBM 2018: 680-682 - [c51]Shengtian Sang
, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang:
A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery. BIBM 2018: 751-752 - [c50]Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang:
Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature. BIBM 2018: 765-766 - [c49]Bo Xu, Yu Liu, Shuo Yu, Lei Wang, Lei Liu, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia
:
Multipath2vec: Predicting Pathogenic Genes via Heterogeneous Network Embedding. BIBM 2018: 951-956 - [c48]Ling Luo, Nan Li, Shuaichi Li, Zhihao Yang, Hongfei Lin:
DUTIR at the CCKS-2018 Task1: A Neural Network Ensemble Approach for Chinese Clinical Named Entity Recognition. CCKS Tasks 2018: 7-12 - [c47]Yufeng Diao, Hongfei Lin, Di Wu, Liang Yang, Kan Xu, Zhihao Yang, Jian Wang, Shaowu Zhang, Bo Xu, Dongyu Zhang:
WECA:A WordNet-Encoded Collocation-Attention Network for Homographic Pun Recognition. EMNLP 2018: 2507-2516 - 2017
- [j28]Wei Zheng, Hongfei Lin, Ling Luo
, Zhehuan Zhao, Zhengguang Li, Yijia Zhang, Zhihao Yang, Jian Wang:
An attention-based effective neural model for drug-drug interactions extraction. BMC Bioinform. 18(1): 445:1-445:11 (2017) - [j27]Xiaoxia Liu, Zhihao Yang, Hongfei Lin, Michael Simmons, Zhiyong Lu:
DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks. BMC Syst. Biol. 11(3): 23:1-23:11 (2017) - [j26]Yashuang Mu, Xiaodong Liu, Zhihao Yang, Xiaolin Liu:
A parallel C4.5 decision tree algorithm based on MapReduce. Concurr. Comput. Pract. Exp. 29(8) (2017) - [j25]Anran Wang, Jian Wang, Hongfei Lin, Jianhai Zhang, Zhihao Yang, Kan Xu:
A multiple distributed representation method based on neural network for biomedical event extraction. BMC Medical Informatics Decis. Mak. 17(S-3): 59-66 (2017) - [c46]Zhehuan Zhao, Zhihao Yang, Cong Sun, Lei Wang, Hongfei Lin:
A hybrid protein-protein interaction triple extraction method for biomedical literature. BIBM 2017: 1515-1521 - [c45]Kai Guo, Hongfei Lin, Bo Xu
, Zhihao Yang, Jian Wang, Yuanyuan Sun, Kan Xu:
Detecting Potential Adverse Drug Reactions Using Association Rules and Embedding Models. ISBRA 2017: 373-378 - 2016
- [j24]Zhehuan Zhao, Zhihao Yang, Ling Luo
, Hongfei Lin, Jian Wang:
Drug drug interaction extraction from biomedical literature using syntax convolutional neural network. Bioinform. 32(22): 3444-3453 (2016) - [j23]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang:
Construction of dynamic probabilistic protein interaction networks for protein complex identification. BMC Bioinform. 17: 186 (2016) - [j22]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yiwei Liu, Shengtian Sang
:
A method for predicting protein complex in dynamic PPI networks. BMC Bioinform. 17(S-7): 229 (2016) - [j21]Zhehuan Zhao, Zhihao Yang, Hongfei Lin, Jian Wang, Song Gao:
A protein-protein interaction extraction approach based on deep neural network. Int. J. Data Min. Bioinform. 15(2): 145-164 (2016) - [j20]Jian Wang, Honglei Li, Yuan An, Hongfei Lin, Zhihao Yang:
Biomedical event trigger detection based on convolutional neural network. Int. J. Data Min. Bioinform. 15(3): 195-213 (2016) - [j19]Wei Zheng
, Hongfei Lin, Zhehuan Zhao, Bo Xu, Yijia Zhang, Zhihao Yang, Jian Wang:
A graph kernel based on context vectors for extracting drug-drug interactions. J. Biomed. Informatics 61: 34-43 (2016) - [c44]Xiaoxia Liu, Zhihao Yang, Hongfei Lin, Michael Simmons, Zhiyong Lu:
DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks. BCB 2016: 527 - [c43]Anran Wang, Jian Wang, Hongfei Lin, Jianhai Zhang, Zhihao Yang, Kan Xu:
Biomedical event extraction based on distributed representation and deep learning. BIBM 2016: 775 - [c42]Zhehuan Zhao, Zhihao Yang, Ling Luo
, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang:
ML-CNN: A novel deep learning based disease named entity recognition architecture. BIBM 2016: 794 - [c41]Zhiheng Li, Zhihao Yang, Hongfei Lin, Jian Wang, Yingyi Gui, Yin Zhang, Lei Wang:
CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature. BIBM 2016: 994-1001 - [c40]Ziwei Zhou, Yingyi Gui, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Disease-specific protein complex detection in the human protein interaction network with a supervised learning method. BIBM 2016: 1296-1301 - [c39]Honglei Li, Jianhai Zhang, Jian Wang, Hongfei Lin, Zhihao Yang:
DUTIR in BioNLP-ST 2016: Utilizing Convolutional Network and Distributed Representation to Extract Complicate Relations. BioNLP (Shared Task) 2016: 93-100 - [c38]Li Wang, Zhi-Hao Yang, Anton V. Prokhorov:
Stability analysis of a hybrid multi-infeed HVDC system connected between two offshore wind farms and two power grids. IAS 2016: 1-9 - [c37]Bo Xu
, Hongfei Lin, Mingzhen Zhao, Zhihao Yang, Jian Wang, Shaowu Zhang:
Detecting Potential Adverse Drug Reactions from Health-Related Social Networks. NLPCC/ICCPOL 2016: 523-530 - [c36]Bo Xu
, Hongfei Lin, Huihui Hao, Zhihao Yang, Jian Wang, Shaowu Zhang:
Generating User-oriented Text Summarization Based on Social Networks Using Topic Models. SMP 2016: 186-193 - 2015
- [j18]Fengying Yu, Zhihao Yang, Xiaohua Hu, Yuanyuan Sun, Hongfei Lin, Jian Wang:
Protein complex detection in PPI networks based on data integration and supervised learning method. BMC Bioinform. 16(S12): S3 (2015) - [j17]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang:
Integrating experimental and literature protein-protein interaction data for protein complex prediction. BMC Genom. 16(S-2): S4 (2015) - [c35]Jian Wang, Jianhai Zhang, Yuan An, Hongfei Lin, Zhihao Yang, Yijia Zhang, Yuanyuan Sun:
Biomedical event trigger detection by dependency-based word embedding. BIBM 2015: 429-432 - [c34]Bo Xu
, Hongfei Lin, Yuan Lin, Yunlong Ma, Liang Yang, Jian Wang, Zhihao Yang:
Learning to rank for biomedical information retrieval. BIBM 2015: 464-469 - [c33]Zhehuan Zhao, Zhihao Yang, Ling Luo
, Hongfei Lin, Jian Wang, Song Gao:
Deep neural network based protein-protein interaction extraction from biomedical literature. BIBM 2015: 1156 - [c32]Mingzhen Zhao, Bo Xu
, Hongfei Lin, Zhihao Yang, Jian Wang:
Discover potential adverse drug reactions using the skip-gram model. BIBM 2015: 1765-1767 - [c31]Hualei Dong, Jian Wang, Hongfei Lin, Bo Xu
, Zhihao Yang:
Predicting Best Answerers for New Questions: An Approach Leveraging Distributed Representations of Words in Community Question Answering. FCST 2015: 13-18 - [c30]Xiaoxia Liu, Hongfei Lin, Zhihao Yang:
Predicting User Relationship from Scratch. SMP 2015: 176-183 - 2014
- [j16]Liangxi Cheng, Hongfei Lin, Feng Zhou, Zhihao Yang, Jian Wang:
Enhancing the accuracy of knowledge discovery: a supervised learning method. BMC Bioinform. 15(S-12): S9 (2014) - [j15]Feng Yu, Zhi-Hao Yang, Nan Tang, Hong Lin, Jian Wang, Zhiwei Yang:
Predicting protein complex in protein interaction network - a supervised learning based method. BMC Syst. Biol. 8(S-3): S4 (2014) - [c29]Fengying Yu, Zhihao Yang, Xiaohua Hu, Yuanyuan Sun, Hongfei Lin, Jian Wang:
Data integration and supervised learning based protein complex detection method. BIBM 2014: 144-149 - [c28]Xiaoxia Liu, Zhihao Yang, Ziwei Zhou, Yuanyuan Sun, Hongfei Lin, Jian Wang:
Exploring the relation between the characteristics of protein interaction networks and the performances of computational complex detection methods. BIBM 2014: 192 - [c27]Rudan Xu, Yuanyuan Sun, Zhihao Yang, Bo Song, Xiaopeng Hu:
Fractal descriptor applied to the classification of HEp-2 cell patterns. BIBM 2014: 237-241 - [c26]Xiaofang Wu, Zhihao Yang, Zhiheng Li, Yuanyuan Sun, Hongfei Lin, Jian Wang:
Deep graph search based disease related knowledge summarization from biomedical literature. BIBM 2014: 505 - [c25]Sheng-Yen Lu, Li Wang, Shun-Chin Ke, Che-Hao Chang, Zhi-Hao Yang:
Evaluation of measured power-quality results of a wind farm connected to Taiwan power system. IAS 2014: 1-7 - [c24]Sheng-Yen Lu, Li Wang, Shun-Chin Ke, Che-Hao Chang, Zhi-Hao Yang:
Analysis of measured power-quality results of a PV system connected to Peng-Hu power system. IAS 2014: 1-7 - 2013
- [j14]Jian Wang, Qian Xu, Hongfei Lin, Zhihao Yang, Yanpeng Li:
Exploring Useful Features for Biomedical Event Trigger Detection. J. Multiple Valued Log. Soft Comput. 20(5-6): 557-570 (2013) - [j13]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li, Bo Xu:
Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 10(3): 729-741 (2013) - [c23]Fengying Yu, Zhihao Yang, Nan Tang, Jiajin Wu, Hongfei Lin, Jian Wang:
Predicting protein complexes in protein interaction networks: A supervised learning based method. BIBM 2013: 188 - [c22]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Bo Xu:
Integrating multiple biomedical resources for protein complex prediction. BIBM 2013: 456-459 - [c21]Liangxi Cheng, Hongfei Lin, Feng Zhou, Zhihao Yang:
Enhancing the accuracy of knowledge discovery: A supervised learning method. BIBM 2013: 620 - 2012
- [j12]Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li:
Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction. IEEE ACM Trans. Comput. Biol. Bioinform. 9(4): 1190-1202 (2012) - [c20]Zhihao Yang, Zhehuan Zhao, Yanpeng Li, Yuncui Hu, Hongfei Lin:
PPIExtractor: A protein-protein interaction Extractor for biomédical literature. BIBM 2012: 1-6 - [c19]Jian Wang, Qian Xu, Hongfei Lin, Zhihao Yang, Yanpeng Li:
Combining labeled and unlabeled data for biomédical event extraction. BIBM Workshops 2012: 594-601 - [c18]Yanhua Wang, Zhihao Yang, Hongfei Lin, Yanpeng Li:
A syntactic rule-based method for automatic pathway information extraction from biomédical literature. BIBM Workshops 2012: 626-633 - [c17]Bo Xu, Hongfei Lin, Zhihao Yang, Kavishwar B. Wagholikar
, Hongfang Liu:
Classifying protein complexes from candidate subgraphs using fuzzy machine learning model. BIBM Workshops 2012: 640-647 - 2011
- [j11]Zhihao Yang, Nan Tang, Xiao Zhang, Hongfei Lin, Yanpeng Li, Zhiwei Yang:
Multiple kernel learning in protein-protein interaction extraction from biomedical literature. Artif. Intell. Medicine 51(3): 163-173 (2011) - [j10]Ning Xia, Hongfei Lin, Zhihao Yang, Yanpeng Li:
Combining multiple disambiguation methods for gene mention normalization. Expert Syst. Appl. 38(7): 7994-7999 (2011) - [j9]Ran Chen, Hongfei Lin, Zhihao Yang:
Passage retrieval based hidden knowledge discovery from biomedical literature. Expert Syst. Appl. 38(8): 9958-9964 (2011) - [j8]Yijia Zhang, Hongfei Lin, Zhihao Yang, Yanpeng Li:
Neighborhood hash graph kernel for protein-protein interaction extraction. J. Biomed. Informatics 44(6): 1086-1092 (2011) - [c16]Jian Wang, Dong Xie, Hongfei Lin, Zhihao Yang, Yijia Zhang:
Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity. BIBM 2011: 582-585 - [c15]Jiajin Wu, Zhihao Yang, Yuan Lin, Hongfei Lin, Zheng Ye, Kan Xu:
Learning to rank using query-level regression. SIGIR 2011: 1091-1092 - 2010
- [j7]Yanpeng Li, Xiaohua Hu, Hongfei Lin, Zhihao Yang:
Learning an enriched representation from unlabeled data for protein-protein interaction extraction. BMC Bioinform. 11(S-2): 7 (2010) - [j6]Zhihao Yang, Hongfei Lin, Yanpeng Li:
BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets. J. Biomed. Informatics 43(1): 88-96 (2010) - [c14]Bo Xu, Hongfei Lin, Zhihao Yang:
Ontology integration to identify protein complex in protein interaction networks. BIBM 2010: 290-295 - [c13]Zhihao Yang, Yuan Lin, Jiajin Wu, Nan Tang, Hongfei Lin, Yanpeng Li:
Ranking SVM for multiple kernels output combination in protein-protein interaction extraction from biomedical literature. BIBM 2010: 595-598 - [c12]Zhihao Yang, Enwen Zhu, Yueheng Wang, Jinbo Liu:
Asymptotic mean square stability analysis for cellular neural networks with random delays. ICNSC 2010: 398-402
2000 – 2009
- 2009
- [j5]Yanpeng Li, Hongfei Lin, Zhihao Yang:
Incorporating rich background knowledge for gene named entity classification and recognition. BMC Bioinform. 10 (2009) - [j4]Zhihao Yang, Hongfei Lin, Baodong Wu:
BioPPIExtractor: A protein-protein interaction extraction system for biomedical literature. Expert Syst. Appl. 36(2): 2228-2233 (2009) - [j3]Baojin Cui, Hongfei Lin, Zhihao Yang:
Uncertainty sampling-based active learning for protein-protein interaction extraction from biomedical literature. Expert Syst. Appl. 36(7): 10344-10350 (2009) - [c11]Yuan Lin, Hongfei Lin, Zhihao Yang, Sui Su:
A Boosting Approach for Learning to Rank Using SVD with Partially Labeled Data. AIRS 2009: 330-338 - [c10]Yanpeng Li, Hongfei Lin, Zhihao Yang:
Applying Feature Coupling Generalization for Protein-Protein Interaction Extraction. BIBM 2009: 396-400 - 2008
- [j2]Zhihao Yang, Hongfei Lin, Yanpeng Li:
Exploiting the performance of dictionary-based bio-entity name recognition in biomedical literature. Comput. Biol. Chem. 32(4): 287-291 (2008) - [j1]Zhihao Yang, Hongfei Lin, Yanpeng Li:
Exploiting the contextual cues for bio-entity name recognition in biomedical literature. J. Biomed. Informatics 41(4): 580-587 (2008) - [c9]Yanpeng Li, Hongfei Lin, Zhihao Yang:
Enhancing Biomedical Named Entity Classification Using Terabyte Unlabeled Data. AIRS 2008: 605-612 - [c8]Xiaoling Sun, Yuan Lin, Hongfei Lin, Zhihao Yang:
DUTIR at TREC 2008 Relevance Feedback Track. TREC 2008 - 2007
- [c7]Ran Chen, Hongfei Lin, Zhihao Yang:
Two Phase Indexes Based Passage Retrieval in Biomedical Texts. LSMS (1) 2007: 746-755 - [c6]Hongfei Lin, Yanpeng Li, Zhihao Yang:
Incorporating Dictionary Features into Conditional Random Fields for Gene/Protein Named Entity Recognition. PAKDD Workshops 2007: 162-173 - [c5]Jianmei Chen, Hui Ren, Linhong Xu, Hongfei Lin, Zhihao Yang:
DUTIR at TREC 2007 Enterprise Track. TREC 2007 - [c4]Rui Song, Qin Tang, Daming Shi, Hongfei Lin, Zhihao Yang:
DUTIR at TREC 2007 Blog Track. TREC 2007 - [c3]Zhihao Yang, Hongfei Lin, Baojin Cui, Yanpeng Li, Xiao Zhang:
DUTIR at TREC 2007 Genomics Track. TREC 2007 - 2006
- [c2]Zhihao Yang, Hongfei Lin, Yanpeng Li, Linhong Xu, Yu Pan, Baoyan Liu:
DUTIR at TREC 2006: Genomics and Enterprise Tracks. TREC 2006 - 2005
- [c1]Zhihao Yang, Hongfei Lin, Yanpeng Li, Baoyan Liu, Ye Lu:
TREC 2005 Genomics Track Experiments at DUTAI. TREC 2005
Coauthor Index
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