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2020 – today
- 2021
- [j75]Paula D. Duek
, Camille Mary, Monique Zahn-Zabal
, Amos Bairoch
, Lydie Lane
:
Functionathon: a manual data mining workflow to generate functional hypotheses for uncharacterized human proteins and its application by undergraduate students. Database J. Biol. Databases Curation 2021 (2021) - 2020
- [j74]Lisanna Paladin
, Mathieu Schaeffer, Pascale Gaudet
, Monique Zahn-Zabal
, Pierre-André Michel, Damiano Piovesan, Silvio C. E. Tosatto
, Amos Bairoch
:
The Feature-Viewer: a visualization tool for positional annotations on a sequence. Bioinform. 36(10): 3244-3245 (2020) - [j73]Wanessa C. Lima, Elisabeth Gasteiger, Paolo Marcatili
, Paula D. Duek
, Amos Bairoch
, Pierre Cosson:
The ABCD database: a repository for chemically defined antibodies. Nucleic Acids Res. 48(Database-Issue): D261-D264 (2020) - [j72]Monique Zahn-Zabal
, Pierre-André Michel, Alain Gateau, Frédéric Nikitin, Mathieu Schaeffer, Estelle Audot, Pascale Gaudet
, Paula D. Duek
, Daniel Dinis Teixeira, Valentine Rech de Laval
, Kasun Samarasinghe, Amos Bairoch
, Lydie Lane
:
The neXtProt knowledgebase in 2020: data, tools and usability improvements. Nucleic Acids Res. 48(Database-Issue): D328-D334 (2020)
2010 – 2019
- 2017
- [j71]Luc Mottin, Emilie Pasche
, Julien Gobeill
, Valentine Rech de Laval
, Anne Gleizes, Pierre-André Michel, Amos Bairoch
, Pascale Gaudet
, Patrick Ruch
:
Triage by ranking to support the curation of protein interactions. Database J. Biol. Databases Curation 2017: bax040 (2017) - [j70]Pascale Gaudet
, Pierre-André Michel, Monique Zahn-Zabal
, Aurore Britan, Isabelle Cusin, Marcin Domagalski
, Paula D. Duek
, Alain Gateau, Anne Gleizes, Valérie Hinard, Valentine Rech de Laval
, JinJin Lin, Frédéric Nikitin, Mathieu Schaeffer, Daniel Dinis Teixeira, Lydie Lane
, Amos Bairoch
:
The neXtProt knowledgebase on human proteins: 2017 update. Nucleic Acids Res. 45(Database-Issue): D177-D182 (2017) - 2016
- [j69]Valérie Hinard, Aurore Britan, J. S. Rougier, Amos Bairoch
, Hugues Abriel
, Pascale Gaudet
:
ICEPO: the ion channel electrophysiology ontology. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j68]Patricia C. Babbitt, Pantelis G. Bagos
, Amos Bairoch
, Alex Bateman, Arnaud Chatonnet
, Mark Jinan Chen, David J. Craik
, Robert D. Finn, David E. Gloriam
, Daniel H. Haft, Bernard Henrissat
, Gemma L. Holliday
, Vignir Ísberg
, Quentin Kaas
, David Landsman
, Nicolas Lenfant
, Gerard Manning
, Nozomi Nagano
, Narayanaswamy Srinivasan, Claire O'Donovan
, Kim D. Pruitt
, Ramanathan Sowdhamini, Neil D. Rawlings
, Milton H. Saier Jr.
, Joanna L. Sharman
, Michael Spedding
, Konstantinos D. Tsirigos
, Åke Västermark, Gerrit Vriend:
Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat. Database J. Biol. Databases Curation 2015 (2015) - [j67]Julien Gobeill
, Arnaud Gaudinat
, Emilie Pasche
, Dina Vishnyakova
, Pascale Gaudet
, Amos Bairoch
, Patrick Ruch
:
Deep Question Answering for protein annotation. Database J. Biol. Databases Curation 2015 (2015) - [j66]Pascale Gaudet
, Pierre-André Michel, Monique Zahn-Zabal
, Isabelle Cusin, Paula D. Duek
, Olivier Evalet, Alain Gateau, Anne Gleizes, Mario Pereira, Daniel Dinis Teixeira
, Ying Zhang, Lydie Lane
, Amos Bairoch
:
The neXtProt knowledgebase on human proteins: current status. Nucleic Acids Res. 43(Database-Issue): 764-770 (2015) - [j65]Christine Chichester, Oliver Karch, Pascale Gaudet, Lydie Lane
, Barend Mons
, Amos Bairoch
:
Converting neXtProt into Linked Data and nanopublications. Semantic Web 6(2): 147-153 (2015) - 2014
- [j64]Heinz Stockinger
, Adrian M. Altenhoff
, Konstantin Arnold, Amos Bairoch
, Frederic B. Bastian
, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane
, Philippe Le Mercier
, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi
, Jacques Rougemont, Torsten Schwede
, Christian von Mering
, Erik van Nimwegen
, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel:
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42(Webserver-Issue): 436-441 (2014) - [j63]Christine Chichester, Pascale Gaudet, Oliver Karch, Paul Groth, Lydie Lane
, Amos Bairoch
, Barend Mons
, Antonis Loizou:
Querying neXtProt nanopublications and their value for insights on sequence variants and tissue expression. J. Web Semant. 29: 3-11 (2014) - 2012
- [j62]Lydie Lane
, Ghislaine Argoud-Puy, Aurore Britan, Isabelle Cusin, Paula D. Duek
, Olivier Evalet, Alain Gateau, Pascale Gaudet
, Anne Gleizes, Alexandre Masselot, Catherine Zwahlen
, Amos Bairoch
:
neXtProt: a knowledge platform for human proteins. Nucleic Acids Res. 40(Database-Issue): 76-83 (2012) - [j61]Anne Morgat
, Eric Coissac
, Elisabeth Coudert
, Kristian B. Axelsen
, Guillaume Keller, Amos Bairoch
, Alan Bridge
, Lydie Bougueleret, Ioannis Xenarios
, Alain Viari:
UniPathway: a resource for the exploration and annotation of metabolic pathways. Nucleic Acids Res. 40(Database-Issue): 761-769 (2012) - 2011
- [j60]Pascale Gaudet, Amos Bairoch
, Dawn Field, Susanna-Assunta Sansone
, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake
, Carol J. Bult, J. Michael Cherry
, Rex L. Chisholm
, Guy Cochrane
, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin
, Robert Gentleman, Carole A. Goble
, Takashi Gojobori, John M. Hancock, Douglas G. Howe
, Tadashi Imanishi
, Janet Kelso
, David Landsman
, Suzanna E. Lewis
, Ilene Karsch-Mizrachi
, Sandra E. Orchard
, B. F. Francis Ouellette
, Shoba Ranganathan
, Lorna J. Richardson
, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan
, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki:
Towards BioDBcore: a community-defined information specification for biological databases. Database J. Biol. Databases Curation 2011 (2011) - [j59]Pascale Gaudet, Amos Bairoch
, Dawn Field, Susanna-Assunta Sansone
, Chris F. Taylor, Teresa K. Attwood
, Alex Bateman
, Judith A. Blake
, Carol J. Bult, J. Michael Cherry
, Rex L. Chisholm
, Guy Cochrane
, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin
, Robert Gentleman, Carole A. Goble
, Takashi Gojobori, John M. Hancock
, Douglas G. Howe, Tadashi Imanishi
, Janet Kelso
, David Landsman
, Suzanna E. Lewis
, Ilene Karsch-Mizrachi
, Sandra E. Orchard
, B. F. Francis Ouellette, Shoba Ranganathan
, Lorna J. Richardson
, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan
, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki:
Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res. 39(Database-Issue): 7-10 (2011) - [j58]Chantal Hulo, Edouard De Castro
, Patrick Masson
, Lydie Bougueleret, Amos Bairoch
, Ioannis Xenarios
, Philippe Le Mercier
:
ViralZone: a knowledge resource to understand virus diversity. Nucleic Acids Res. 39(Database-Issue): 576-582 (2011) - [c6]Guido Bologna, Anne-Lise Veuthey, Marco Pagni
, Lydie Lane
, Amos Bairoch
:
A Preliminary Study on the Prediction of Human Protein Functions. IWINAC (1) 2011: 334-343 - 2010
- [j57]Robin Liechti, Anne Gleizes, Dmitry Kuznetsov
, Lydie Bougueleret, Philippe Le Mercier
, Amos Bairoch
, Ioannis Xenarios:
OpenFluDB, a database for human and animal influenza virus. Database J. Biol. Databases Curation 2010 (2010) - [j56]Christian J. A. Sigrist
, Lorenzo Cerutti, Edouard De Castro
, Petra S. Langendijk-Genevaux
, Virginie Bulliard, Amos Bairoch
, Nicolas Hulo:
PROSITE, a protein domain database for functional characterization and annotation. Nucleic Acids Res. 38(Database-Issue): 161-166 (2010)
2000 – 2009
- 2009
- [j55]Pascale Gaudet, Lydie Lane
, Petra Fey
, Alan Bridge
, Sylvain Poux
, Andrea H. Auchincloss, Kristian B. Axelsen, Silvia Braconi-Quintaje, Emmanuel Boutet
, P. Brown, Elisabeth Coudert
, Ruchira S. Datta, W. C. de Lima, Tulio de Oliveira, Severine Duvaud, N. Farriol-Mathis, Serenella Ferro-Rojas, Marc Feuermann, Alain Gateau, Ursula Hinz, Chantal Hulo, Janet James, Silvia Jimenez, Florence Jungo, Guillaume Keller, Phillippe Lemercier, Damien Lieberherr, Madelaine Moinat, Anastasia N. Nikolskaya, Ivo Pedruzzi
, Catherine Rivoire
, Bernd Roechert, Michel Schneider
, E. Stanley, Michael Tognolli
, Kimmen Sjölander, Lydie Bougueleret, Rex L. Chisholm
, Amos Bairoch
:
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase. Database J. Biol. Databases Curation 2009 (2009) - [j54]Eric Jain, Amos Bairoch
, Severine Duvaud, Isabelle Phan, Nicole Redaschi
, Baris E. Suzek
, Maria Jesus Martin
, Peter B. McGarvey
, Elisabeth Gasteiger
:
Infrastructure for the life sciences: design and implementation of the UniProt website. BMC Bioinform. 10 (2009) - [j53]Sarah Hunter
, Rolf Apweiler
, Teresa K. Attwood
, Amos Bairoch
, Alex Bateman
, David Binns, Peer Bork
, Ujjwal Das, Louise C. Daugherty, Lauranne Duquenne, Robert D. Finn
, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Aurélie Laugraud, Ivica Letunic
, David Lonsdale, Rodrigo Lopez
, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry
, Alex L. Mitchell
, Nicola J. Mulder
, Darren A. Natale, Christine A. Orengo, Antony F. Quinn
, Jeremy D. Selengut, Christian J. A. Sigrist
, Manjula Thimma, Paul D. Thomas
, Franck Valentin, Derek Wilson, Cathy H. Wu
, Corin Yeats:
InterPro: the integrative protein signature database. Nucleic Acids Res. 37(Database-Issue): 211-215 (2009) - [j52]Tania Lima, Andrea H. Auchincloss
, Elisabeth Coudert
, Guillaume Keller, Karine Michoud, Catherine Rivoire
, Virginie Bulliard, Edouard De Castro
, Corinne Lachaize, Delphine Baratin, Isabelle Phan, Lydie Bougueleret, Amos Bairoch
:
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot. Nucleic Acids Res. 37(Database-Issue): 471-478 (2009) - [j51]Luiz Gonzaga Almeida, Noboru J. Sakabe, Alice R. de Oliveira, Maria Cristina C. Silva, Alex S. Mundstein, Tzeela Cohen, Yao-Tseng Chen, Ramon Chua, Sita Gurung, Sacha Gnjatic
, Achim A. Jungbluth, Otavia L. Caballero, Amos Bairoch
, Eva Kiesler, Sarah L. White, Andrew J. G. Simpson, Lloyd J. Old, Anamaria A. Camargo
, Ana Tereza Ribeiro de Vasconcelos
:
CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens. Nucleic Acids Res. 37(Database-Issue): 816-819 (2009) - 2008
- [j50]Amos Bairoch
, Sarah Cohen Boulakia
, Christine Froidevaux:
Review of the selected proceedings of the Fifth International Workshop on Data Integration in the Life Sciences 2008. BMC Bioinform. 9(S-8) (2008) - [j49]Nicolas Hulo, Amos Bairoch
, Virginie Bulliard, Lorenzo Cerutti, Béatrice A. Cuche, Edouard De Castro
, Corinne Lachaize, Petra S. Langendijk-Genevaux
, Christian J. A. Sigrist
:
The 20 years of PROSITE. Nucleic Acids Res. 36(Database-Issue): 245-249 (2008) - [c5]Amos Bairoch
:
UniProtKB/Swiss-Prot: New and Future Developments. DILS 2008: 204-206 - [e1]Amos Bairoch
, Sarah Cohen Boulakia
, Christine Froidevaux:
Data Integration in the Life Sciences, 5th International Workshop, DILS 2008, Evry, France, June 25-27, 2008. Proceedings. Lecture Notes in Computer Science 5109, Springer 2008, ISBN 978-3-540-69827-2 [contents] - 2007
- [j48]Nicola J. Mulder
, Rolf Apweiler
, Teresa K. Attwood
, Amos Bairoch
, Alex Bateman
, David Binns, Peer Bork
, Virginie Buillard, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Louise C. Daugherty, Mark Dibley, Robert D. Finn
, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicolas Hulo, Sarah Hunter
, Daniel Kahn, Alexander Kanapin
, Anish Kejariwal, Alberto Labarga
, Petra S. Langendijk-Genevaux
, David Lonsdale, Rodrigo Lopez
, Ivica Letunic
, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry
, Alex L. Mitchell
, Anastasia N. Nikolskaya, Sandra E. Orchard
, Christine A. Orengo, Robert Petryszak
, Jeremy D. Selengut, Christian J. A. Sigrist
, Paul D. Thomas
, Franck Valentin, Derek Wilson, Cathy H. Wu
, Corin Yeats:
New developments in the InterPro database. Nucleic Acids Res. 35(Database-Issue): 224-228 (2007) - 2006
- [j47]Cathy H. Wu
, Rolf Apweiler
, Amos Bairoch
, Darren A. Natale, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger
, Hongzhan Huang, Rodrigo Lopez
, Michele Magrane
, Maria Jesus Martin
, Raja Mazumder
, Claire O'Donovan
, Nicole Redaschi
, Baris E. Suzek
:
The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res. 34(Database-Issue): 187-191 (2006) - [j46]Nicolas Hulo, Amos Bairoch
, Virginie Bulliard, Lorenzo Cerutti, Edouard De Castro
, Petra S. Langendijk-Genevaux
, Marco Pagni
, Christian J. A. Sigrist
:
The PROSITE database. Nucleic Acids Res. 34(Database-Issue): 227-230 (2006) - [j45]Edouard De Castro
, Christian J. A. Sigrist
, Alexandre Gattiker, Virginie Bulliard, Petra S. Langendijk-Genevaux
, Elisabeth Gasteiger
, Amos Bairoch
, Nicolas Hulo:
ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins. Nucleic Acids Res. 34(Web-Server-Issue): 362-365 (2006) - 2005
- [j44]Christian J. A. Sigrist
, Edouard De Castro
, Petra S. Langendijk-Genevaux
, Virginie Le Saux, Amos Bairoch
, Nicolas Hulo:
ProRule: a new database containing functional and structural information on PROSITE profiles. Bioinform. 21(21): 4060-4066 (2005) - [j43]Amos Bairoch
, Rolf Apweiler
, Cathy H. Wu
, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger
, Hongzhan Huang, Rodrigo Lopez
, Michele Magrane
, Maria Jesus Martin
, Darren A. Natale, Claire O'Donovan
, Nicole Redaschi
, Lai-Su L. Yeh:
The Universal Protein Resource (UniProt). Nucleic Acids Res. 33(Database-Issue): 154-159 (2005) - [j42]Nicola J. Mulder
, Rolf Apweiler
, Teresa K. Attwood
, Amos Bairoch
, Alex Bateman
, David Binns, Paul Bradley, Peer Bork
, Phillip Bucher, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin
, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin
, Maria Krestyaninova
, David Lonsdale, Rodrigo Lopez
, Ivica Letunic
, Martin Madera, John Maslen, Jennifer McDowall, Alex L. Mitchell
, Anastasia N. Nikolskaya, Sandra E. Orchard
, Marco Pagni
, Chris P. Ponting
, Emmanuel Quevillon, Jeremy D. Selengut, Christian J. A. Sigrist
, Ville Silventoinen, David J. Studholme
, Robert Vaughan
, Cathy H. Wu
:
InterPro, progress and status in 2005. Nucleic Acids Res. 33(Database-Issue): 201-205 (2005) - 2004
- [j41]Amos Bairoch
, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger
:
Swiss-Prot: Juggling between evolution and stability. Briefings Bioinform. 5(1): 39-58 (2004) - [j40]Rolf Apweiler
, Amos Bairoch
, Cathy H. Wu, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger
, Hongzhan Huang, Rodrigo Lopez
, Michele Magrane
, Maria Jesus Martin
, Darren A. Natale, Claire O'Donovan, Nicole Redaschi
, Lai-Su L. Yeh:
UniProt: the Universal Protein knowledgebase. Nucleic Acids Res. 32(Database-Issue): 115-119 (2004) - [j39]Nicolas Hulo, Christian J. A. Sigrist
, Virginie Le Saux, Petra S. Langendijk-Genevaux
, Lorenza Bordoli, Alexandre Gattiker, Edouard De Castro
, Philipp Bucher, Amos Bairoch
:
Recent improvements to the PROSITE database. Nucleic Acids Res. 32(Database-Issue): 134-137 (2004) - [j38]Astrid Fleischmann, Michael Darsow, Kirill Degtyarenko, Wolfgang Fleischmann, Sinéad Boyce, Kristian B. Axelsen
, Amos Bairoch
, Dietmar Schomburg, Keith F. Tipton, Rolf Apweiler
:
IntEnz, the integrated relational enzyme database. Nucleic Acids Res. 32(Database-Issue): 434-437 (2004) - [j37]Henning Hermjakob
, Luisa Montecchi-Palazzi, Chris Lewington, Sugath Mudali, Samuel Kerrien
, Sandra E. Orchard
, Martin Vingron, Bernd Roechert, Peter Roepstorff, Alfonso Valencia, Hanah Margalit, John Armstrong, Amos Bairoch
, Gianni Cesareni, David James Sherman, Rolf Apweiler
:
IntAct: an open source molecular interaction database. Nucleic Acids Res. 32(Database-Issue): 452-455 (2004) - 2003
- [j36]Alexandre Gattiker, Karine Michoud, Catherine Rivoire
, Andrea H. Auchincloss
, Elisabeth Coudert
, Tania Lima, Paul J. Kersey
, Marco Pagni
, Christian J. A. Sigrist
, Corinne Lachaize, Anne-Lise Veuthey, Elisabeth Gasteiger
, Amos Bairoch
:
Automated annotation of microbial proteomes in SWISS-PROT. Comput. Biol. Chem. 27(1): 49-58 (2003) - [j35]Nicola J. Mulder, Rolf Apweiler
, Terri K. Attwood
, Amos Bairoch
, Daniel Barrell, Alex Bateman
, David Binns, Margaret Biswas, Paul Bradley, Peer Bork
, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin
, Laurent Falquet, Wolfgang Fleischmann, Sam Griffiths-Jones
, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin
, Maria Krestyaninova
, Rodrigo Lopez
, Ivica Letunic
, David Lonsdale, Ville Silventoinen, Sandra E. Orchard
, Marco Pagni
, David Peyruc, Chris P. Ponting
, Jeremy D. Selengut, Florence Servant
, Christian J. A. Sigrist
, Robert Vaughan
, Evgeni M. Zdobnov:
The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res. 31(1): 315-318 (2003) - [j34]Brigitte Boeckmann, Amos Bairoch
, Rolf Apweiler
, Marie-Claude Blatter, Anne Estreicher
, Elisabeth Gasteiger
, Maria Jesus Martin
, Karine Michoud, Claire O'Donovan
, Isabelle Phan, Sandrine Pilbout, Michel Schneider:
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res. 31(1): 365-370 (2003) - [j33]Elisabeth Gasteiger
, Alexandre Gattiker, Christine Hoogland
, Ivan Ivanyi, Ron D. Appel, Amos Bairoch
:
ExPASy: the proteomics server for in-depth protein knowledge and analysis. Nucleic Acids Res. 31(13): 3784-3788 (2003) - [j32]I. Q. H. Phan, Sandrine Pilbout, Wolfgang Fleischmann, Amos Bairoch
:
NEWT, a new taxonomy portal. Nucleic Acids Res. 31(13): 3822-3823 (2003) - 2002
- [j31]Nicola J. Mulder
, Rolf Apweiler
, Terri K. Attwood
, Amos Bairoch
, Alex Bateman
, David Binns, Margaret Biswas, Paul Bradley, Peer Bork
, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Richard Durbin
, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Sam Griffiths-Jones, Daniel H. Haft, Henning Hermjakob
, Nicolas Hulo, Daniel Kahn, Alexander Kanapin
, Maria Krestyaninova, Rodrigo Lopez
, Ivica Letunic
, Sue Orchard, Marco Pagni
, David Peyruc, Chris P. Ponting
, Florence Servant
, Christian J. A. Sigrist
:
InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites. Briefings Bioinform. 3(3): 225-235 (2002) - [j30]Christian J. A. Sigrist
, Lorenzo Cerutti, Nicolas Hulo, Alexandre Gattiker, Laurent Falquet, Marco Pagni
, Amos Bairoch
, Philipp Bucher:
PROSITE: A Documented Database Using Patterns and Profiles as Motif Descriptors. Briefings Bioinform. 3(3): 265-274 (2002) - [j29]Claire O'Donovan
, Maria Jesus Martin
, Alexandre Gattiker, Elisabeth Gasteiger
, Amos Bairoch
, Rolf Apweiler
:
High-quality Protein Knowledge Resource: SWISS-PROT and TrEMBL. Briefings Bioinform. 3(3): 275-284 (2002) - [j28]Flavio Monigatti, Elisabeth Gasteiger
, Amos Bairoch
, Eva Jung:
The Sulfinator: predicting tyrosine sulfation sites in protein sequences. Bioinform. 18(5): 769-770 (2002) - [j27]Laurent Falquet, Marco Pagni
, Philipp Bucher, Nicolas Hulo, Christian J. A. Sigrist
, Kay Hofmann, Amos Bairoch
:
The PROSITE database, its status in 2002. Nucleic Acids Res. 30(1): 235-238 (2002) - 2001
- [j26]Rolf Apweiler, Paul J. Kersey, Vivien Junker, Amos Bairoch:
Technical comment to "Database verification studies of SWISS-PROT and GenBank" by Karp et al. Bioinform. 17(6): 533-534 (2001) - [j25]Rolf Apweiler
, Terri K. Attwood
, Amos Bairoch
, Alex Bateman, Ewan Birney
, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin
, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob
, Nicolas Hulo, Inge Jonassen
, Daniel Kahn, Alexander Kanapin
, Youla Karavidopoulou
, Rodrigo Lopez
, Beate Marx, Nicola J. Mulder
, Thomas M. Oinn, Marco Pagni
, Florence Servant
, Christian J. A. Sigrist
, Evgeni M. Zdobnov:
The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res. 29(1): 37-40 (2001) - 2000
- [j24]Amos Bairoch
:
Serendipity in bioinformatics, the tribulations of a Swiss bioinformatician through exciting times!. Bioinform. 16(1): 48-64 (2000) - [j23]Rolf Apweiler
, Terri K. Attwood
, Amos Bairoch
, Alex Bateman, Ewan Birney
, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin
, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob
, Nicolas Hulo, Inge Jonassen
, Daniel Kahn, Alexander Kanapin
, Youla Karavidopoulou
, Rodrigo Lopez
, Beate Marx, Nicola J. Mulder
, Thomas M. Oinn, Marco Pagni
, Florence Servant
, Christian J. A. Sigrist
, Evgeni M. Zdobnov:
InterPro-an integrated documentation resource for protein families, domains and functional sites. Bioinform. 16(12): 1145-1150 (2000) - [j22]Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res. 28(1): 45-48 (2000) - [j21]Christine Hoogland
, Jean-Charles Sanchez, Luisa Tonella, Pierre-Alain Binz
, Amos Bairoch
, Denis F. Hochstrasser, Ron D. Appel:
The 1999 SWISS-2DPAGE database update. Nucleic Acids Res. 28(1): 286-288 (2000) - [j20]Amos Bairoch
:
The ENZYME database in 2000. Nucleic Acids Res. 28(1): 304-305 (2000)
1990 – 1999
- 1999
- [j19]V. L. Junker, Rolf Apweiler
, Amos Bairoch
:
Representation of functional information in the SWISS-PROT Data Bank. Bioinform. 15(12): 1066-1067 (1999) - [j18]Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999. Nucleic Acids Res. 27(1): 49-54 (1999) - [j17]Kay Hofmann, Philipp Bucher, Laurent Falquet, Amos Bairoch
:
The PROSITE database, its status in 1999. Nucleic Acids Res. 27(1): 215-219 (1999) - [j16]Christine Hoogland
, Jean-Charles Sanchez, Luisa Tonella, Amos Bairoch
, Denis F. Hochstrasser, Ron D. Appel:
The SWISS-2DPAGE database: what has changed during the last year. Nucleic Acids Res. 27(1): 289-291 (1999) - [j15]Amos Bairoch
:
The ENZYME data bank in 1999. Nucleic Acids Res. 27(1): 310-311 (1999) - 1998
- [j14]Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998. Nucleic Acids Res. 26(1): 38-42 (1998) - [j13]Florence Horn, Jonathan Weare, Margot W. Beukers, S. Hörsch, Amos Bairoch
, W. Chen, Øyvind Edvardsen, Fabien Campagne
, Gert Vriend:
GPCRDB: an information system for G protein-coupled receptors. Nucleic Acids Res. 26(1): 275-279 (1998) - [j12]Christine Hoogland
, Jean-Charles Sanchez, Luisa Tonella, Amos Bairoch
, Denis F. Hochstrasser, Ron D. Appel:
Current status of the SWISS-2DPAGE database. Nucleic Acids Res. 26(1): 332-333 (1998) - 1997
- [j11]Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence data bank and its supplement TrEMBL. Nucleic Acids Res. 25(1): 31-36 (1997) - [j10]Amos Bairoch
, Philipp Bucher, Kay Hofmann:
The PROSITE database, its status in 1997. Nucleic Acids Res. 25(1): 217-221 (1997) - [c4]Rolf Apweiler, Alain Gateau, Sergio Contrino, Maria Jesus Martin, Vivien Junker, Claire O'Donovan, Fiona Lang, Nicoletta Mitaritonna, Stephanie Kappus, Amos Bairoch:
Protein Sequence Annotation in the Genome Era: The Annotation Concept of SWISS-PROT + TREMBL. ISMB 1997: 33-43 - 1996
- [j9]Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence data bank and its new supplement TREMBL. Nucleic Acids Res. 24(1): 21-25 (1996) - [j8]Reinhard Dölz, Marie-Odile Mossé, Piotr P. Slonimski, Amos Bairoch
, Patrick Linder:
LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces. Nucleic Acids Res. 24(1): 50-52 (1996) - [j7]Ron D. Appel, Jean-Charles Sanchez, Amos Bairoch
, Olivier Golaz, Florence Ravier, Christian Pasquali, Graham J. Hughes, Denis F. Hochstrasser:
The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis, its status in 1995. Nucleic Acids Res. 24(1): 180-181 (1996) - [j6]Amos Bairoch
, Philipp Bucher, Kay Hofmann:
The PROSITE database, its status in 1995. Nucleic Acids Res. 24(1): 189-196 (1996) - [j5]Amos Bairoch
:
The ENZYME data bank in 1995. Nucleic Acids Res. 24(1): 221-222 (1996) - [c3]Rolf Apweiler, Vivien Junker, Alain Gateau, Claire O'Donovan, Fiona Lang, Amos Bairoch:
New Developments in the Linking of Biological Databases and Computer-Generation of Annotation. German Conference on Bioinformatics 1996: 29-34 - [c2]Rolf Apweiler, Vivien Junker, Alain Gateau, Claire O'Donovan, Fiona Lang, Amos Bairoch
:
New Developments in Linking of Biological Databases and Computer-Generation of Annotations: SWISS-PROT and Its Computer-Annotated Supplement TREMBL. German Conference on Bioinformatics - Selected Papers 1996: 44-51 - 1994
- [c1]Philipp Bucher, Amos Bairoch:
A Generalized Profile Syntax for Biomolecular Sequence Motifs and its Function in Automatic Sequence Interpretation. ISMB 1994: 53-61 - 1993
- [j4]Amos Bairoch
, Brigitte Boeckmann:
The SWISS-PROT protein sequence data bank, recent developments. Nucleic Acids Res. 21(13): 3093-3096 (1993) - [j3]Amos Bairoch
:
The PROSITE dictionary of sites and patterns in proteins, its current status. Nucleic Acids Res. 21(13): 3097-3103 (1993) - [j2]Amos Bairoch
:
The ENZYME data bank. Nucleic Acids Res. 21(13): 3155-3156 (1993) - 1991
- [j1]Amos Bairoch
:
SEQANALREF: a sequence analysis bibliographic reference databank. Comput. Appl. Biosci. 7(2): 268 (1991)