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Marek Ostaszewski
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2020 – today
- 2024
- [j17]Carlos Vega
, Marek Ostaszewski
, Valentin Grouès
, Reinhard Schneider
, Venkata P. Satagopam
:
BioKC: a collaborative platform for curation and annotation of molecular interactions. Database J. Biol. Databases Curation 2024 (2024) - 2023
- [j16]Piotr Gawron, David Hoksza, Janet Piñero, María Peña-Chilet, Marina Esteban-Medina, Jose Luis Fernandez-Rueda, Vincenza Colonna, Ewa Smula, Laurent Heirendt, François Ancien, Valentin Grouès, Venkata P. Satagopam, Reinhard Schneider, Joaquín Dopazo, Laura I. Furlong, Marek Ostaszewski:
Visualization of automatically combined disease maps and pathway diagrams for rare diseases. Frontiers Bioinform. 3 (2023) - [j15]Ahmed Abdelmonem Hemedan, Reinhard Schneider, Marek Ostaszewski:
Applications of Boolean modeling to study the dynamics of a complex disease and therapeutics responses. Frontiers Bioinform. 3 (2023) - [j14]Alexander Mazein, Marcio Luis Acencio
, Irina Balaur, Adrien Rougny, Danielle Welter, Anna Niarakis, Diana Ramirez Ardila, Ugur Dogrusoz
, Piotr Gawron, Venkata P. Satagopam, Wei Gu, Andreas Kremer
, Reinhard Schneider, Marek Ostaszewski:
A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance. Frontiers Bioinform. 3 (2023) - 2021
- [j13]David Hoksza
, Piotr Gawron, Marek Ostaszewski
, Jan Hasenauer, Reinhard Schneider
:
Closing the gap between formats for storing layout information in systems biology. Briefings Bioinform. 22(1): 608 (2021) - [j12]Anna Niarakis
, Martin Kuiper, Marek Ostaszewski
, Rahuman S. Malik-Sheriff
, Cristina Casals-Casas, Denis Thieffry
, Tom C. Freeman, Paul D. Thomas, Vasundra Touré, Vincent Noël
, Gautier Stoll
, Julio Saez-Rodriguez
, Aurélien Naldi
, Eugenia Oshurko
, Ioannis Xenarios, Sylvain Soliman
, Claudine Chaouiya
, Tomás Helikar
, Laurence Calzone
:
Setting the basis of best practices and standards for curation and annotation of logical models in biology - highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop. Briefings Bioinform. 22(2): 1848-1859 (2021) - [j11]Alexander Mazein, Adrien Rougny, Jonathan R. Karr, Julio Saez-Rodriguez
, Marek Ostaszewski
, Reinhard Schneider
:
Reusability and composability in process description maps: RAS-RAF-MEK-ERK signalling. Briefings Bioinform. 22(5) (2021) - [j10]Kinza Rian
, Marina Esteban-Medina, Marta R. Hidalgo, Cankut Çubuk, Matias M. Falco
, Carlos Loucera
, Devrim Gunyel, Marek Ostaszewski
, María Peña-Chilet, Joaquín Dopazo
:
Mechanistic modeling of the SARS-CoV-2 disease map. BioData Min. 14(1): 5 (2021) - [j9]Sune S. Nielsen
, Marek Ostaszewski
, Fintan McGee
, David Hoksza
, Simone Zorzan:
Machine Learning to Support the Presentation of Complex Pathway Graphs. IEEE ACM Trans. Comput. Biol. Bioinform. 18(3): 1130-1141 (2021) - 2020
- [j8]David Hoksza
, Piotr Gawron, Marek Ostaszewski
, Jan Hasenauer
, Reinhard Schneider
:
Closing the gap between formats for storing layout information in systems biology. Briefings Bioinform. 21(4): 1249-1260 (2020) - [j7]Vidisha Singh, George D. Kalliolias
, Marek Ostaszewski
, Maëva Veyssiere
, Eleftherios Pilalis
, Piotr Gawron, Alexander Mazein, Eric Bonnet
, Elisabeth Petit-Teixeira, Anna Niarakis
:
RA-map: building a state-of-the-art interactive knowledge base for rheumatoid arthritis. Database J. Biol. Databases Curation 2020 (2020)
2010 – 2019
- 2019
- [j6]Marek Ostaszewski
, Stephan Gebel, Inna Kuperstein
, Alexander Mazein, Andrei Yu. Zinovyev, Ugur Dogrusoz
, Jan Hasenauer
, Ronan M. T. Fleming, Nicolas Le Novère, Piotr Gawron, Thomas S. Ligon
, Anna Niarakis
, David P. Nickerson, Daniel Weindl
, Rudi Balling
, Emmanuel Barillot, Charles Auffray, Reinhard Schneider
:
Community-driven roadmap for integrated disease maps. Briefings Bioinform. 20(2): 659-670 (2019) - [j5]David Hoksza
, Piotr Gawron, Marek Ostaszewski
, Ewa Smula, Reinhard Schneider
:
MINERVA API and plugins: opening molecular network analysis and visualization to the community. Bioinform. 35(21): 4496-4498 (2019) - 2018
- [j4]David Hoksza
, Piotr Gawron, Marek Ostaszewski
, Reinhard Schneider
:
MolArt: a molecular structure annotation and visualization tool. Bioinform. 34(23): 4127-4128 (2018) - [j3]Marek Ostaszewski
, Emmanuel Kieffer
, Grégoire Danoy
, Reinhard Schneider
, Pascal Bouvry
:
Clustering approaches for visual knowledge exploration in molecular interaction networks. BMC Bioinform. 19(1): 308:1-308:15 (2018) - [c9]María Eugenia Curi, Lucía Carozzi, Renzo Massobrio, Sergio Nesmachnow, Grégoire Danoy
, Marek Ostaszewski, Pascal Bouvry
:
Single and Multiobjective Evolutionary Algorithms for Clustering Biomedical Information with Unknown Number of Clusters. BIOMA 2018: 100-112 - 2016
- [j2]Venkata P. Satagopam
, Wei Gu
, Serge Eifes, Piotr Gawron, Marek Ostaszewski
, Stephan Gebel, Adriano Barbosa-Silva
, Rudi Balling
, Reinhard Schneider
:
Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases. Big Data 4(2): 97-108 (2016) - 2014
- [c8]Christian Grévisse
, Ian Muller, Juan Luis Jiménez Laredo
, Marek Ostaszewski, Grégoire Danoy
, Pascal Bouvry
:
Visualization and classification of protein secondary structures using Self-Organizing Maps. MCDM 2014: 129-136
2000 – 2009
- 2009
- [c7]Marek Ostaszewski, Pascal Bouvry
, Franciszek Seredynski
:
Multiobjective classification with moGEP: an application in the network traffic domain. GECCO 2009: 635-642 - 2008
- [c6]Marek Ostaszewski, Pascal Bouvry
, Franciszek Seredynski
:
An approach to intrusion detection by means of idiotypic networks paradigm. IEEE Congress on Evolutionary Computation 2008: 2099-2108 - [c5]Marek Ostaszewski, Pascal Bouvry
, Franciszek Seredynski:
Denial of service detection and analysis using idiotypic networks paradigm. GECCO 2008: 79-86 - [c4]Marek Ostaszewski, Pascal Bouvry
, Franciszek Seredynski
:
Adaptive and dynamic intrusion detection by means of idiotypic networks paradigm. IPDPS 2008: 1-8 - 2007
- [j1]Marek Ostaszewski, Franciszek Seredynski
, Pascal Bouvry
:
Coevolutionary-based Mechanisms for Network Anomaly Detection. J. Math. Model. Algorithms 6(3): 411-431 (2007) - 2006
- [c3]Marek Ostaszewski, Franciszek Seredynski, Pascal Bouvry
:
Immune anomaly detection enhanced with evolutionary paradigms. GECCO 2006: 119-126 - [c2]Marek Ostaszewski, Franciszek Seredynski
, Pascal Bouvry
:
Network Traffic Analysis Using Immunological and Evolutionary Paradigms. Intelligent Information Systems 2006: 359-363 - [c1]Marek Ostaszewski, Franciszek Seredynski
, Pascal Bouvry
:
A nonself space approach to network anomaly detection. IPDPS 2006
Coauthor Index
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last updated on 2024-08-05 20:23 CEST by the dblp team
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