BibTeX records: Toshiaki Tokimatsu

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@article{DBLP:journals/jcisd/MoriyaYONKTKG16,
  author    = {Yuki Moriya and
               Takuji Yamada and
               Shujiro Okuda and
               Zenichi Nakagawa and
               Masaaki Kotera and
               Toshiaki Tokimatsu and
               Minoru Kanehisa and
               Susumu Goto},
  title     = {Identification of Enzyme Genes Using Chemical Structure Alignments
               of Substrate-Product Pairs},
  journal   = {J. Chem. Inf. Model.},
  volume    = {56},
  number    = {3},
  pages     = {510--516},
  year      = {2016},
  url       = {https://doi.org/10.1021/acs.jcim.5b00216},
  doi       = {10.1021/acs.jcim.5b00216},
  timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcisd/MoriyaYONKTKG16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/KoteraTYMMTG14,
  author    = {Masaaki Kotera and
               Yasuo Tabei and
               Yoshihiro Yamanishi and
               Ai Muto and
               Yuki Moriya and
               Toshiaki Tokimatsu and
               Susumu Goto},
  title     = {Metabolome-scale prediction of intermediate compounds in multistep
               metabolic pathways with a recursive supervised approach},
  journal   = {Bioinform.},
  volume    = {30},
  number    = {12},
  pages     = {165--174},
  year      = {2014},
  url       = {https://doi.org/10.1093/bioinformatics/btu265},
  doi       = {10.1093/bioinformatics/btu265},
  timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bioinformatics/KoteraTYMMTG14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbcb/KoteraNNMMOKKTKG14,
  author    = {Masaaki Kotera and
               Yosuke Nishimura and
               Zenichi Nakagawa and
               Ai Muto and
               Yuki Moriya and
               Shinobu Okamoto and
               Shuichi Kawashima and
               Toshiaki Katayama and
               Toshiaki Tokimatsu and
               Minoru Kanehisa and
               Susumu Goto},
  title     = {{PIERO} ontology for analysis of biochemical transformations: Effective
               implementation of reaction information in the {IUBMB} enzyme list},
  journal   = {J. Bioinform. Comput. Biol.},
  volume    = {12},
  number    = {6},
  year      = {2014},
  url       = {https://doi.org/10.1142/S0219720014420013},
  doi       = {10.1142/S0219720014420013},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jbcb/KoteraNNMMOKKTKG14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/KoteraTYTG13,
  author    = {Masaaki Kotera and
               Yasuo Tabei and
               Yoshihiro Yamanishi and
               Toshiaki Tokimatsu and
               Susumu Goto},
  title     = {Supervised \emph{de novo} reconstruction of metabolic pathways from
               metabolome-scale compound sets},
  journal   = {Bioinform.},
  volume    = {29},
  number    = {13},
  pages     = {135--144},
  year      = {2013},
  url       = {https://doi.org/10.1093/bioinformatics/btt244},
  doi       = {10.1093/bioinformatics/btt244},
  timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bioinformatics/KoteraTYTG13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/KoteraTYMTKG13,
  author    = {Masaaki Kotera and
               Yasuo Tabei and
               Yoshihiro Yamanishi and
               Yuki Moriya and
               Toshiaki Tokimatsu and
               Minoru Kanehisa and
               Susumu Goto},
  title     = {{KCF-S:} {KEGG} Chemical Function and Substructure for improved interpretability
               and prediction in chemical bioinformatics},
  journal   = {{BMC} Syst. Biol.},
  volume    = {7},
  number    = {{S-6}},
  pages     = {S2},
  year      = {2013},
  url       = {https://doi.org/10.1186/1752-0509-7-S6-S2},
  doi       = {10.1186/1752-0509-7-S6-S2},
  timestamp = {Tue, 05 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/bmcsb/KoteraTYMTKG13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jcisd/MutoKTNGK13,
  author    = {Ai Muto and
               Masaaki Kotera and
               Toshiaki Tokimatsu and
               Zenichi Nakagawa and
               Susumu Goto and
               Minoru Kanehisa},
  title     = {Modular Architecture of Metabolic Pathways Revealed by Conserved Sequences
               of Reactions},
  journal   = {J. Chem. Inf. Model.},
  volume    = {53},
  number    = {3},
  pages     = {613--622},
  year      = {2013},
  url       = {https://doi.org/10.1021/ci3005379},
  doi       = {10.1021/ci3005379},
  timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcisd/MutoKTNGK13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/NakayaKIHKMOTTYYKG13,
  author    = {Akihiro Nakaya and
               Toshiaki Katayama and
               Masumi Itoh and
               Kazushi Hiranuka and
               Shuichi Kawashima and
               Yuki Moriya and
               Shujiro Okuda and
               Michihiro Tanaka and
               Toshiaki Tokimatsu and
               Yoshihiro Yamanishi and
               Akiyasu C. Yoshizawa and
               Minoru Kanehisa and
               Susumu Goto},
  title     = {{KEGG} {OC:} a large-scale automatic construction of taxonomy-based
               ortholog clusters},
  journal   = {Nucleic Acids Res.},
  volume    = {41},
  number    = {Database-Issue},
  pages     = {353--357},
  year      = {2013},
  url       = {https://doi.org/10.1093/nar/gks1239},
  doi       = {10.1093/nar/gks1239},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/NakayaKIHKMOTTYYKG13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/KoteraTKG11,
  author    = {Masaaki Kotera and
               Toshiaki Tokimatsu and
               Minoru Kanehisa and
               Susumu Goto},
  title     = {{MUCHA:} multiple chemical alignment algorithm to identify building
               block substructures of orphan secondary metabolites},
  journal   = {{BMC} Bioinform.},
  volume    = {12},
  number    = {{S-14}},
  pages     = {S1},
  year      = {2011},
  url       = {https://doi.org/10.1186/1471-2105-12-S14-S1},
  doi       = {10.1186/1471-2105-12-S14-S1},
  timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/KoteraTKG11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/SakuraiAOSOSHYYAAHYKOTKSSS11,
  author    = {Nozomu Sakurai and
               Takeshi Ara and
               Yoshiyuki Ogata and
               Ryosuke Sano and
               Takashi Ohno and
               Kenjiro Sugiyama and
               Atsushi Hiruta and
               Kiyoshi Yamazaki and
               Kentaro Yano and
               Koh Aoki and
               Asaph Aharoni and
               Kazuki Hamada and
               Koji Yokoyama and
               Shingo Kawamura and
               Hirofumi Otsuka and
               Toshiaki Tokimatsu and
               Minoru Kanehisa and
               Hideyuki Suzuki and
               Kazuki Saito and
               Daisuke Shibata},
  title     = {KaPPA-View4: a metabolic pathway database for representation and analysis
               of correlation networks of gene co-expression and metabolite co-accumulation
               and omics data},
  journal   = {Nucleic Acids Res.},
  volume    = {39},
  number    = {Database-Issue},
  pages     = {677--684},
  year      = {2011},
  url       = {https://doi.org/10.1093/nar/gkq989},
  doi       = {10.1093/nar/gkq989},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/SakuraiAOSOSHYYAAHYKOTKSSS11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/MoriyaSHTKGK10,
  author    = {Yuki Moriya and
               Daichi Shigemizu and
               Masahiro Hattori and
               Toshiaki Tokimatsu and
               Masaaki Kotera and
               Susumu Goto and
               Minoru Kanehisa},
  title     = {PathPred: an enzyme-catalyzed metabolic pathway prediction server},
  journal   = {Nucleic Acids Res.},
  volume    = {38},
  number    = {Web-Server-Issue},
  pages     = {138--143},
  year      = {2010},
  url       = {https://doi.org/10.1093/nar/gkq318},
  doi       = {10.1093/nar/gkq318},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/MoriyaSHTKGK10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/KanehisaAGHHIKKOTY08,
  author    = {Minoru Kanehisa and
               Michihiro Araki and
               Susumu Goto and
               Masahiro Hattori and
               Mika Hirakawa and
               Masumi Itoh and
               Toshiaki Katayama and
               Shuichi Kawashima and
               Shujiro Okuda and
               Toshiaki Tokimatsu and
               Yoshihiro Yamanishi},
  title     = {{KEGG} for linking genomes to life and the environment},
  journal   = {Nucleic Acids Res.},
  volume    = {36},
  number    = {Database-Issue},
  pages     = {480--484},
  year      = {2008},
  url       = {https://doi.org/10.1093/nar/gkm882},
  doi       = {10.1093/nar/gkm882},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/KanehisaAGHHIKKOTY08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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